1
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Shouval HZ, Kirkwood A. Eligibility traces as a synaptic substrate for learning. Curr Opin Neurobiol 2025; 91:102978. [PMID: 39965463 DOI: 10.1016/j.conb.2025.102978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2024] [Revised: 01/22/2025] [Accepted: 01/27/2025] [Indexed: 02/20/2025]
Abstract
Animals can learn to associate a behavior or a stimulus with a delayed reward, this is essential for survival. A mechanism proposed for bridging this gap are synaptic eligibility traces, which are slowly decaying tags, which can lead to synaptic plasticity if followed by rewards. Recently, experiments have demonstrated the existence of synaptic eligibility traces in diverse neural systems, depending on either neuromodulators or plateau potentials. Evidence for both eligibility trace-dependent potentiation and depression of synaptic efficacies has emerged. We discuss the commonalities and differences of these different results. We show why the existence of both potentiation and depression is important because these opposing forces can lead to a synaptic stopping rule. Without a stopping rule, synapses would saturate at their upper bound thus leading to a loss of selectivity and representational power. We discuss the possible underlying mechanisms of the eligibility traces as well as their functional and theoretical significance.
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Affiliation(s)
- Harel Z Shouval
- Department of Neurobiology and Anatomy, University of Texas Medical School at Houston, Houston, TX, USA; Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.
| | - Alfredo Kirkwood
- Mind/Brain Institute, Johns Hopkins University, 3400 North Charles Street, 350 Dunning Hall, Baltimore, MD 21218, USA
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2
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Simonyan K, Darbinyan L, Hambardzumyan L, Manukyan L, Chavushyan V. Teucrium Polium ameliorates amyloid β-induced brain network disorders in rats: electrophysiological and behavioral studies. BMC Complement Med Ther 2025; 25:116. [PMID: 40148951 PMCID: PMC11948851 DOI: 10.1186/s12906-024-04715-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2023] [Accepted: 11/22/2024] [Indexed: 03/29/2025] Open
Abstract
Synaptic failure in specific cholinergic networks in rat brains has been implicated in amyloid β-induced neurodegeneration. Teucrium polium is a promising candidate for drug development against Alzheimer's disease (AD) and similar disorders. However, the protective effect of Teucrium polium against amyloid β-induced impairment of short-term synaptic plasticity is still poorly understood. In this study, we used in vivo extracellular single-unit recordings to investigate the preventive efficacy of Teucrium polium on Aβ(25-35)-induced aberrant neuronal activity in the hippocampus and basolateral amygdala of rats, in response to high-frequency stimulation of the cholinergic nucleus basalis magnocellularis (NBM). After 12 weeks of intracerebroventricular administration of Aβ(25-35), alterations such as decreased excitatory responses and increased inhibitory synaptic activity were observed in the NBM-hippocampus and NBM-basolateral amygdala cholinergic circuits. Treatment with Teucrium polium improved the balance of excitatory and inhibitory responses by modulating synaptic transmission strength and restoring short-term plasticity. Acute injection of a therapeutic dose of Teucrium temporarily inhibited spiking activity in single NBM neurons. Open field tests revealed that amyloid-injected rats displayed anxiety and reduced exploratory drive. Treatment with Teucrium polium improved these behaviors, reducing anxiety and increasing exploration. Teucrium polium mitigated amyloid β-induced alterations in cholinergic circuits by enhancing the adaptive capacity of short-term synaptic plasticity. These findings suggest that Teucrium polium could serve as a preventive strategy to delay the progression of cholinergic neurodegeneration.
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Affiliation(s)
- Karen Simonyan
- Neuroendocrine Relationships Lab, Orbeli Institute of Physiology NAS RA, Yerevan, 0028, Armenia
| | - Lilit Darbinyan
- Sensorimotor Integration Lab, Orbeli Institute of Physiology NAS RA, Yerevan, 0028, Armenia.
| | - Lilia Hambardzumyan
- Sensorimotor Integration Lab, Orbeli Institute of Physiology NAS RA, Yerevan, 0028, Armenia
| | - Larisa Manukyan
- Sensorimotor Integration Lab, Orbeli Institute of Physiology NAS RA, Yerevan, 0028, Armenia
| | - Vergine Chavushyan
- Neuroendocrine Relationships Lab, Orbeli Institute of Physiology NAS RA, Yerevan, 0028, Armenia
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3
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Ferrand R, Baronig M, Unger F, Legenstein R. Non-synaptic plasticity enables memory-dependent local learning. PLoS One 2025; 20:e0313331. [PMID: 40096655 DOI: 10.1371/journal.pone.0313331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Accepted: 10/22/2024] [Indexed: 03/19/2025] Open
Abstract
Synaptic plasticity is essential for memory formation and learning in the brain. In addition, recent results indicate that non-synaptic plasticity processes such as the regulation of neural membrane properties contribute to memory formation, its functional role in memory and learning has however remained elusive. Here, we propose that non-synaptic and synaptic plasticity are both essential components to enable memory-dependent processing in neuronal networks. While the former acts on a fast timescale for rapid information storage, the latter shapes network processing on a slower timescale to harness this memory as a functional component. We analyse this concept in a network model where pyramidal neurons regulate their apical trunk excitability in a Hebbian manner. We find that local synaptic plasticity rules can be derived for this model and show that the interplay between this synaptic plasticity and the non-synaptic trunk plasticity enables the model to successfully accommodate memory-dependent processing capabilities in a number of tasks, ranging from simple memory tests to question answering.
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Affiliation(s)
- Romain Ferrand
- Institute of Theoretical Computer Science, Graz University of Technology, Graz, Austria
| | - Maximilian Baronig
- Institute of Theoretical Computer Science, Graz University of Technology, Graz, Austria
| | - Florian Unger
- Institute of Theoretical Computer Science, Graz University of Technology, Graz, Austria
| | - Robert Legenstein
- Institute of Theoretical Computer Science, Graz University of Technology, Graz, Austria
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4
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Micheva KD, Simhal AK, Schardt J, Smith SJ, Weinberg RJ, Owen SF. Data-driven synapse classification reveals a logic of glutamate receptor diversity. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2024.12.11.628056. [PMID: 39713368 PMCID: PMC11661198 DOI: 10.1101/2024.12.11.628056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 12/24/2024]
Abstract
The rich diversity of synapses facilitates the capacity of neural circuits to transmit, process and store information. We used multiplex super-resolution proteometric imaging through array tomography to define features of single synapses in mouse neocortex. We find that glutamatergic synapses cluster into subclasses that parallel the distinct biochemical and functional categories of receptor subunits: GluA1/4, GluA2/3 and GluN1/GluN2B. Two of these subclasses align with physiological expectations based on synaptic plasticity: large AMPAR-rich synapses may represent potentiated synapses, whereas small NMDAR-rich synapses suggest "silent" synapses. The NMDA receptor content of large synapses correlates with spine neck diameter, and thus the potential for coupling to the parent dendrite. Overall, ultrastructural features predict receptor content of synapses better than parent neuron identity does, suggesting synapse subclasses act as fundamental elements of neuronal circuits. No barriers prevent future generalization of this approach to other species, or to study of human disorders and therapeutics.
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Affiliation(s)
- Kristina D. Micheva
- Department of Neurosurgery, Stanford University School of Medicine, Stanford, CA 94305
| | - Anish K. Simhal
- Department of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY 10065
| | - Jenna Schardt
- Allen Institute for Brain Science, Seattle, WA 98109
| | - Stephen J Smith
- Allen Institute for Brain Science, Seattle, WA 98109
- Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305
| | - Richard J. Weinberg
- Department of Cell Biology and Physiology, University of North Carolina, Chapel Hill, NC 27514
| | - Scott F. Owen
- Department of Neurosurgery, Stanford University School of Medicine, Stanford, CA 94305
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA 94305
- Lead contact
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5
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Russell EL, McDannald MA. Ventral Pallidum Neurons Are Necessary to Generalize and Express Fear-Related Responding in a Minimal Threat Setting. eNeuro 2024; 11:ENEURO.0124-24.2024. [PMID: 39510838 PMCID: PMC11595600 DOI: 10.1523/eneuro.0124-24.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2024] [Revised: 10/15/2024] [Accepted: 10/30/2024] [Indexed: 11/15/2024] Open
Abstract
Fear generalization is a hallmark of anxiety disorders. Experimentally, fear generalization can be difficult to dissociate from its counterpart, fear discrimination. Here, we use minimal threat learning procedures to reveal such a dissociation. We show that in Long-Evans rats, an auditory threat cue predicting footshock on 10% of trials produces a discriminated fear response that does not generalize to a neutral auditory cue. In contrast, even slightly higher footshock probabilities (30 and 20%) produce fear generalization. AAV-mediated, caspase-3 deletion of ventral pallidum neurons abolishes fear generalization and reduces threat cue responding during extinction. The ventral pallidum's contribution to fear generalization and extinction threat responding does not depend on inputs from the nucleus accumbens. The results demonstrate a minimal threat learning approach to dissociate fear discrimination from fear generalization and a novel role for the ventral pallidum in generalizing and expressing fear.
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Affiliation(s)
- Emma L Russell
- Department of Psychology & Neuroscience, Boston College, Chestnut Hill, Massachusetts 02467
| | - Michael A McDannald
- Department of Psychology & Neuroscience, Boston College, Chestnut Hill, Massachusetts 02467
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6
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Sanz-Gálvez R, Falardeau D, Kolta A, Inglebert Y. The role of astrocytes from synaptic to non-synaptic plasticity. Front Cell Neurosci 2024; 18:1477985. [PMID: 39493508 PMCID: PMC11527691 DOI: 10.3389/fncel.2024.1477985] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2024] [Accepted: 10/02/2024] [Indexed: 11/05/2024] Open
Abstract
Information storage and transfer in the brain require a high computational power. Neuronal network display various local or global mechanisms to allow information storage and transfer in the brain. From synaptic to intrinsic plasticity, the rules of input-output function modulation have been well characterized in neurons. In the past years, astrocytes have been suggested to increase the computational power of the brain and we are only just starting to uncover their role in information processing. Astrocytes maintain a close bidirectional communication with neurons to modify neuronal network excitability, transmission, axonal conduction, and plasticity through various mechanisms including the release of gliotransmitters or local ion homeostasis. Astrocytes have been significantly studied in the context of long-term or short-term synaptic plasticity, but this is not the only mechanism involved in memory formation. Plasticity of intrinsic neuronal excitability also participates in memory storage through regulation of voltage-gated ion channels or axonal morphological changes. Yet, the contribution of astrocytes to these other forms of non-synaptic plasticity remains to be investigated. In this review, we summarized the recent advances on the role of astrocytes in different forms of plasticity and discuss new directions and ideas to be explored regarding astrocytes-neuronal communication and regulation of plasticity.
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Affiliation(s)
- Rafael Sanz-Gálvez
- Department of Neurosciences, Université de Montréal, Montréal, QC, Canada
- Centre Interdisciplinaire de Recherche sur le Cerveau et l’Apprentissage (CIRCA), Montréal, QC, Canada
| | - Dominic Falardeau
- Department of Neurosciences, Université de Montréal, Montréal, QC, Canada
- Centre Interdisciplinaire de Recherche sur le Cerveau et l’Apprentissage (CIRCA), Montréal, QC, Canada
| | - Arlette Kolta
- Department of Neurosciences, Université de Montréal, Montréal, QC, Canada
- Centre Interdisciplinaire de Recherche sur le Cerveau et l’Apprentissage (CIRCA), Montréal, QC, Canada
- Department of Stomatology, Université de Montréal, Montréal, QC, Canada
| | - Yanis Inglebert
- Department of Neurosciences, Université de Montréal, Montréal, QC, Canada
- Centre Interdisciplinaire de Recherche sur le Cerveau et l’Apprentissage (CIRCA), Montréal, QC, Canada
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7
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Squadrani L, Wert-Carvajal C, Müller-Komorowska D, Bohmbach K, Henneberger C, Verzelli P, Tchumatchenko T. Astrocytes enhance plasticity response during reversal learning. Commun Biol 2024; 7:852. [PMID: 38997325 PMCID: PMC11245475 DOI: 10.1038/s42003-024-06540-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Accepted: 07/03/2024] [Indexed: 07/14/2024] Open
Abstract
Astrocytes play a key role in the regulation of synaptic strength and are thought to orchestrate synaptic plasticity and memory. Yet, how specifically astrocytes and their neuroactive transmitters control learning and memory is currently an open question. Recent experiments have uncovered an astrocyte-mediated feedback loop in CA1 pyramidal neurons which is started by the release of endocannabinoids by active neurons and closed by astrocytic regulation of the D-serine levels at the dendrites. D-serine is a co-agonist for the NMDA receptor regulating the strength and direction of synaptic plasticity. Activity-dependent D-serine release mediated by astrocytes is therefore a candidate for mediating between long-term synaptic depression (LTD) and potentiation (LTP) during learning. Here, we show that the mathematical description of this mechanism leads to a biophysical model of synaptic plasticity consistent with the phenomenological model known as the BCM model. The resulting mathematical framework can explain the learning deficit observed in mice upon disruption of the D-serine regulatory mechanism. It shows that D-serine enhances plasticity during reversal learning, ensuring fast responses to changes in the external environment. The model provides new testable predictions about the learning process, driving our understanding of the functional role of neuron-glia interaction in learning.
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Affiliation(s)
- Lorenzo Squadrani
- Institute of Experimental Epileptology and Cognition Research, Medical Faculty, University of Bonn, Bonn, Germany
| | - Carlos Wert-Carvajal
- Institute of Experimental Epileptology and Cognition Research, Medical Faculty, University of Bonn, Bonn, Germany
| | | | - Kirsten Bohmbach
- Institute of Cellular Neurosciences, Medical Faculty, University of Bonn, Bonn, Germany
| | - Christian Henneberger
- Institute of Cellular Neurosciences, Medical Faculty, University of Bonn, Bonn, Germany
- German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany
| | - Pietro Verzelli
- Institute of Experimental Epileptology and Cognition Research, Medical Faculty, University of Bonn, Bonn, Germany.
| | - Tatjana Tchumatchenko
- Institute of Experimental Epileptology and Cognition Research, Medical Faculty, University of Bonn, Bonn, Germany.
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8
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Vignoud G, Venance L, Touboul JD. Anti-Hebbian plasticity drives sequence learning in striatum. Commun Biol 2024; 7:555. [PMID: 38724614 PMCID: PMC11082161 DOI: 10.1038/s42003-024-06203-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Accepted: 04/17/2024] [Indexed: 05/12/2024] Open
Abstract
Spatio-temporal activity patterns have been observed in a variety of brain areas in spontaneous activity, prior to or during action, or in response to stimuli. Biological mechanisms endowing neurons with the ability to distinguish between different sequences remain largely unknown. Learning sequences of spikes raises multiple challenges, such as maintaining in memory spike history and discriminating partially overlapping sequences. Here, we show that anti-Hebbian spike-timing dependent plasticity (STDP), as observed at cortico-striatal synapses, can naturally lead to learning spike sequences. We design a spiking model of the striatal output neuron receiving spike patterns defined as sequential input from a fixed set of cortical neurons. We use a simple synaptic plasticity rule that combines anti-Hebbian STDP and non-associative potentiation for a subset of the presented patterns called rewarded patterns. We study the ability of striatal output neurons to discriminate rewarded from non-rewarded patterns by firing only after the presentation of a rewarded pattern. In particular, we show that two biological properties of striatal networks, spiking latency and collateral inhibition, contribute to an increase in accuracy, by allowing a better discrimination of partially overlapping sequences. These results suggest that anti-Hebbian STDP may serve as a biological substrate for learning sequences of spikes.
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Affiliation(s)
- Gaëtan Vignoud
- Center for Interdisciplinary Research in Biology (CIRB), College de France, CNRS, INSERM, Université PSL, Paris, France
| | - Laurent Venance
- Center for Interdisciplinary Research in Biology (CIRB), College de France, CNRS, INSERM, Université PSL, Paris, France.
| | - Jonathan D Touboul
- Department of Mathematics and Volen National Center for Complex Systems, Brandeis University, Waltham, MA, USA.
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9
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Ghazinouri B, Nejad MM, Cheng S. Navigation and the efficiency of spatial coding: insights from closed-loop simulations. Brain Struct Funct 2024; 229:577-592. [PMID: 37029811 PMCID: PMC10978723 DOI: 10.1007/s00429-023-02637-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Accepted: 03/28/2023] [Indexed: 04/09/2023]
Abstract
Spatial learning is critical for survival and its underlying neuronal mechanisms have been studied extensively. These studies have revealed a wealth of information about the neural representations of space, such as place cells and boundary cells. While many studies have focused on how these representations emerge in the brain, their functional role in driving spatial learning and navigation has received much less attention. We extended an existing computational modeling tool-chain to study the functional role of spatial representations using closed-loop simulations of spatial learning. At the heart of the model agent was a spiking neural network that formed a ring attractor. This network received inputs from place and boundary cells and the location of the activity bump in this network was the output. This output determined the movement directions of the agent. We found that the navigation performance depended on the parameters of the place cell input, such as their number, the place field sizes, and peak firing rate, as well as, unsurprisingly, the size of the goal zone. The dependence on the place cell parameters could be accounted for by just a single variable, the overlap index, but this dependence was nonmonotonic. By contrast, performance scaled monotonically with the Fisher information of the place cell population. Our results therefore demonstrate that efficiently encoding spatial information is critical for navigation performance.
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Affiliation(s)
- Behnam Ghazinouri
- Faculty of Computer Science, Institute for Neural Computation, Ruhr University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany
| | - Mohammadreza Mohagheghi Nejad
- Faculty of Computer Science, Institute for Neural Computation, Ruhr University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany
| | - Sen Cheng
- Faculty of Computer Science, Institute for Neural Computation, Ruhr University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany.
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10
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Khodaie B, Edelmann E, Leßmann V. Distinct GABAergic modulation of timing-dependent LTP in CA1 pyramidal neurons along the longitudinal axis of the mouse hippocampus. iScience 2024; 27:109320. [PMID: 38487018 PMCID: PMC10937841 DOI: 10.1016/j.isci.2024.109320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 01/25/2024] [Accepted: 02/20/2024] [Indexed: 03/17/2024] Open
Abstract
Synaptic plasticity in the hippocampus underlies episodic memory formation, with dorsal hippocampus being instrumental for spatial memory whereas ventral hippocampus is crucial for emotional learning. Here, we studied how GABAergic inhibition regulates physiologically relevant low repeat spike timing-dependent LTP (t-LTP) at Schaffer collateral-CA1 synapses along the dorsoventral hippocampal axis. We used two t-LTP protocols relying on only 6 repeats of paired spike-firing in pre- and postsynaptic cells within 10 s that differ in postsynaptic firing patterns. GABAA receptor mechanisms played a greater role in blocking 6× 1:1 t-LTP that recruits single postsynaptic action potentials. 6× 1:4 t-LTP that depends on postsynaptic burst-firing unexpectedly required intact GABAB receptor signaling. The magnitude of both t-LTP-forms decreased along the dorsoventral axis, despite increasing excitability and basal synaptic strength in this direction. This suggests that GABAergic inhibition contributes to the distinct roles of dorsal and ventral hippocampus in memory formation.
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Affiliation(s)
- Babak Khodaie
- Institut für Physiologie, Otto-von-Guericke-Universität (OVGU), Medizinische Fakultät, 39120 Magdeburg, Germany
- OVGU International ESF-funded Graduate School ABINEP, 39104 Magdeburg, Germany
| | - Elke Edelmann
- Institut für Physiologie, Otto-von-Guericke-Universität (OVGU), Medizinische Fakultät, 39120 Magdeburg, Germany
- Center for Behavioral Brain Sciences, 39104 Magdeburg, Germany
- OVGU International ESF-funded Graduate School ABINEP, 39104 Magdeburg, Germany
| | - Volkmar Leßmann
- Institut für Physiologie, Otto-von-Guericke-Universität (OVGU), Medizinische Fakultät, 39120 Magdeburg, Germany
- Center for Behavioral Brain Sciences, 39104 Magdeburg, Germany
- OVGU International ESF-funded Graduate School ABINEP, 39104 Magdeburg, Germany
- DZPG (German Center of Mental Health), partner site Halle/Jena/Magdeburg (CIRC), Magdeburg, Germany
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11
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Dunton KL, Hedrick NG, Meamardoost S, Ren C, Howe JR, Wang J, Root CM, Gunawan R, Komiyama T, Zhang Y, Hwang EJ. Divergent Learning-Related Transcriptional States of Cortical Glutamatergic Neurons. J Neurosci 2024; 44:e0302232023. [PMID: 38238073 PMCID: PMC10919205 DOI: 10.1523/jneurosci.0302-23.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Revised: 09/30/2023] [Accepted: 11/10/2023] [Indexed: 03/08/2024] Open
Abstract
Experience-dependent gene expression reshapes neural circuits, permitting the learning of knowledge and skills. Most learning involves repetitive experiences during which neurons undergo multiple stages of functional and structural plasticity. Currently, the diversity of transcriptional responses underlying dynamic plasticity during repetition-based learning is poorly understood. To close this gap, we analyzed single-nucleus transcriptomes of L2/3 glutamatergic neurons of the primary motor cortex after 3 d motor skill training or home cage control in water-restricted male mice. "Train" and "control" neurons could be discriminated with high accuracy based on expression patterns of many genes, indicating that recent experience leaves a widespread transcriptional signature across L2/3 neurons. These discriminating genes exhibited divergent modes of coregulation, differentiating neurons into discrete clusters of transcriptional states. Several states showed gene expressions associated with activity-dependent plasticity. Some of these states were also prominent in the previously published reference, suggesting that they represent both spontaneous and task-related plasticity events. Markedly, however, two states were unique to our dataset. The first state, further enriched by motor training, showed gene expression suggestive of late-stage plasticity with repeated activation, which is suitable for expected emergent neuronal ensembles that stably retain motor learning. The second state, equally found in both train and control mice, showed elevated levels of metabolic pathways and norepinephrine sensitivity, suggesting a response to common experiences specific to our experimental conditions, such as water restriction or circadian rhythm. Together, we uncovered divergent transcriptional responses across L2/3 neurons, each potentially linked with distinct features of repetition-based motor learning such as plasticity, memory, and motivation.
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Affiliation(s)
- Katie L Dunton
- Department of Cell and Molecular Biology, College of the Environment and Life Sciences, University of Rhode Island, Kingston 02881, Rhode Island
| | - Nathan G Hedrick
- Department of Neurobiology, Center for Neural Circuits and Behavior, Department of Neurosciences, and Halıcıoğlu Data Science Institute, University of California San Diego, La Jolla 92093, California
| | - Saber Meamardoost
- Department of Chemical and Biological Engineering, University at Buffalo-SUNY, Buffalo 14260, New York
| | - Chi Ren
- Department of Neurobiology, Center for Neural Circuits and Behavior, Department of Neurosciences, and Halıcıoğlu Data Science Institute, University of California San Diego, La Jolla 92093, California
| | - James R Howe
- Department of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla 92093, California
- Neurosciences Graduate Program, University of California San Diego, La Jolla 92093, California
| | - Jing Wang
- Department of Cell and Molecular Biology, College of the Environment and Life Sciences, University of Rhode Island, Kingston 02881, Rhode Island
| | - Cory M Root
- Department of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla 92093, California
| | - Rudiyanto Gunawan
- Department of Chemical and Biological Engineering, University at Buffalo-SUNY, Buffalo 14260, New York
| | - Takaki Komiyama
- Department of Neurobiology, Center for Neural Circuits and Behavior, Department of Neurosciences, and Halıcıoğlu Data Science Institute, University of California San Diego, La Jolla 92093, California
| | - Ying Zhang
- Department of Cell and Molecular Biology, College of the Environment and Life Sciences, University of Rhode Island, Kingston 02881, Rhode Island
| | - Eun Jung Hwang
- Department of Neurobiology, Center for Neural Circuits and Behavior, Department of Neurosciences, and Halıcıoğlu Data Science Institute, University of California San Diego, La Jolla 92093, California
- Cell Biology and Anatomy, Chicago Medical School, Stanson Toshok Center for Brain Function and Repair, Rosalind Franklin University of Medicine and Science, North Chicago 60064, Illinois
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12
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Liao Y, Yu N. [Spatial navigation method based on the entorhinal-hippocampal-prefrontal information transmission circuit of rat's brain]. SHENG WU YI XUE GONG CHENG XUE ZA ZHI = JOURNAL OF BIOMEDICAL ENGINEERING = SHENGWU YIXUE GONGCHENGXUE ZAZHI 2024; 41:80-89. [PMID: 38403607 PMCID: PMC10894733 DOI: 10.7507/1001-5515.202303047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 11/10/2023] [Indexed: 02/27/2024]
Abstract
Physiological studies have revealed that rats perform spatial localization relying on grid cells and place cells in the entorhinal-hippocampal CA3 structure. The dynamic connection between the entorhinal-hippocampal structure and the prefrontal cortex is crucial for navigation. Based on these findings, this paper proposes a spatial navigation method based on the entorhinal-hippocampal-prefrontal information transmission circuit of the rat's brain, with the aim of endowing the mobile robot with strong spatial navigation capability. Using the hippocampal CA3-prefrontal spatial navigation model as a foundation, this paper constructed a dynamic self-organizing model with the hippocampal CA1 place cells as the basic unit to optimize the navigation path. The path information was then fed back to the impulse neural network via hippocampal CA3 place cells and prefrontal cortex action neurons, improving the convergence speed of the model and helping to establish long-term memory of navigation habits. To verify the validity of the method, two-dimensional simulation experiments and three-dimensional simulation robot experiments were designed in this paper. The experimental results showed that the method presented in this paper not only surpassed other algorithms in terms of navigation efficiency and convergence speed, but also exhibited good adaptability to dynamic navigation tasks. Furthermore, our method can be effectively applied to mobile robots.
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Affiliation(s)
- Yishen Liao
- Faculty of Information Technology, Beijing University of Technology, Beijing Key Laboratory of Computational Intelligence and Intelligent System, Beijing 100124, P. R. China
| | - Naigong Yu
- Faculty of Information Technology, Beijing University of Technology, Beijing Key Laboratory of Computational Intelligence and Intelligent System, Beijing 100124, P. R. China
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13
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Yang Y, Booth V, Zochowski M. Acetylcholine facilitates localized synaptic potentiation and location specific feature binding. Front Neural Circuits 2023; 17:1239096. [PMID: 38033788 PMCID: PMC10684311 DOI: 10.3389/fncir.2023.1239096] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 10/11/2023] [Indexed: 12/02/2023] Open
Abstract
Forebrain acetylcholine (ACh) signaling has been shown to drive attention and learning. Recent experimental evidence of spatially and temporally constrained cholinergic signaling has sparked interest to investigate how it facilitates stimulus-induced learning. We use biophysical excitatory-inhibitory (E-I) multi-module neural network models to show that external stimuli and ACh signaling can mediate spatially constrained synaptic potentiation patterns. The effects of ACh on neural excitability are simulated by varying the conductance of a muscarinic receptor-regulated hyperpolarizing slow K+ current (m-current). Each network module consists of an E-I network with local excitatory connectivity and global inhibitory connectivity. The modules are interconnected with plastic excitatory synaptic connections, that change via a spike-timing-dependent plasticity (STDP) rule. Our results indicate that spatially constrained ACh release influences the information flow represented by network dynamics resulting in selective reorganization of inter-module interactions. Moreover the information flow depends on the level of synchrony in the network. For highly synchronous networks, the more excitable module leads firing in the less excitable one resulting in strengthening of the outgoing connections from the former and weakening of its incoming synapses. For networks with more noisy firing patterns, activity in high ACh regions is prone to induce feedback firing of synchronous volleys and thus strengthening of the incoming synapses to the more excitable region and weakening of outgoing synapses. Overall, these results suggest that spatially and directionally specific plasticity patterns, as are presumed necessary for feature binding, can be mediated by spatially constrained ACh release.
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Affiliation(s)
- Yihao Yang
- Department of Physics, University of Michigan, Ann Arbor, MI, United States
| | - Victoria Booth
- Departments of Mathematics and Anesthesiology, University of Michigan, Ann Arbor, MI, United States
| | - Michal Zochowski
- Department of Physics and Biophysics Program, University of Michigan, Ann Arbor, MI, United States
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14
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Liao Y, Yu N, Yan J. A Navigation Path Search and Optimization Method for Mobile Robots Based on the Rat Brain's Cognitive Mechanism. Biomimetics (Basel) 2023; 8:427. [PMID: 37754178 PMCID: PMC10526878 DOI: 10.3390/biomimetics8050427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2023] [Revised: 09/11/2023] [Accepted: 09/11/2023] [Indexed: 09/28/2023] Open
Abstract
Rats possess exceptional navigational abilities, allowing them to adaptively adjust their navigation paths based on the environmental structure. This remarkable ability is attributed to the interactions and regulatory mechanisms among various spatial cells within the rat's brain. Based on these, this paper proposes a navigation path search and optimization method for mobile robots based on the rat brain's cognitive mechanism. The aim is to enhance the navigation efficiency of mobile robots. The mechanism of this method is based on developing a navigation habit. Firstly, the robot explores the environment to search for the navigation goal. Then, with the assistance of boundary vector cells, the greedy strategy is used to guide the robot in generating a locally optimal path. Once the navigation path is generated, a dynamic self-organizing model based on the hippocampal CA1 place cells is constructed to further optimize the navigation path. To validate the effectiveness of the method, this paper designs several 2D simulation experiments and 3D robot simulation experiments, and compares the proposed method with various algorithms. The experimental results demonstrate that the proposed method not only surpasses other algorithms in terms of path planning efficiency but also yields the shortest navigation path. Moreover, the method exhibits good adaptability to dynamic navigation tasks.
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Affiliation(s)
- Yishen Liao
- Faculty of Information Technology, Beijing University of Technology, Beijing 100124, China; (Y.L.); (J.Y.)
- Beijing Key Laboratory of Computational Intelligence and Intelligent System, Beijing 100124, China
- Engineering Research Center of Digital Community, Ministry of Education, Beijing 100124, China
| | - Naigong Yu
- Faculty of Information Technology, Beijing University of Technology, Beijing 100124, China; (Y.L.); (J.Y.)
- Beijing Key Laboratory of Computational Intelligence and Intelligent System, Beijing 100124, China
- Engineering Research Center of Digital Community, Ministry of Education, Beijing 100124, China
| | - Jinhan Yan
- Faculty of Information Technology, Beijing University of Technology, Beijing 100124, China; (Y.L.); (J.Y.)
- Beijing Key Laboratory of Computational Intelligence and Intelligent System, Beijing 100124, China
- Engineering Research Center of Digital Community, Ministry of Education, Beijing 100124, China
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15
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Möhring L, Gläscher J. Prediction errors drive dynamic changes in neural patterns that guide behavior. Cell Rep 2023; 42:112931. [PMID: 37540597 DOI: 10.1016/j.celrep.2023.112931] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 06/13/2023] [Accepted: 07/18/2023] [Indexed: 08/06/2023] Open
Abstract
Learning describes the process by which our internal expectation models of the world are updated by surprising outcomes (prediction errors [PEs]) to improve predictions of future events. However, the mechanisms through which error signals dynamically influence existing neural representations are unknown. Here, we use functional magnetic resonance imaging (fMRI) in humans solving a two-step Markov decision task to investigate changes in neural activation patterns following PEs. Using a dynamic multivariate pattern analysis, we can show that PE-related fMRI responses in error-coding regions predict trial-by-trial changes in multivariate neural patterns in the orbitofrontal cortex, the precuneus, and the ventromedial prefrontal cortex (vmPFC). Importantly, the dynamics of these pattern changes in the vmPFC also predicted upcoming changes in choice strategies and thus highlight the importance of these pattern changes for behavior.
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Affiliation(s)
- Leon Möhring
- Institute for Systems Neuroscience, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246 Hamburg, Germany.
| | - Jan Gläscher
- Institute for Systems Neuroscience, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246 Hamburg, Germany.
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16
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周 茜, 郑 鹏, 李 小. [A bio-inspired hierarchical spiking neural network with biological synaptic plasticity for event camera object recognition]. SHENG WU YI XUE GONG CHENG XUE ZA ZHI = JOURNAL OF BIOMEDICAL ENGINEERING = SHENGWU YIXUE GONGCHENGXUE ZAZHI 2023; 40:692-699. [PMID: 37666759 PMCID: PMC10477392 DOI: 10.7507/1001-5515.202207040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Revised: 07/14/2023] [Indexed: 09/06/2023]
Abstract
With inherent sparse spike-based coding and asynchronous event-driven computation, spiking neural network (SNN) is naturally suitable for processing event stream data of event cameras. In order to improve the feature extraction and classification performance of bio-inspired hierarchical SNNs, in this paper an event camera object recognition system based on biological synaptic plasticity is proposed. In our system input event streams were firstly segmented adaptively using spiking neuron potential to improve computational efficiency of the system. Multi-layer feature learning and classification are implemented by our bio-inspired hierarchical SNN with synaptic plasticity. After Gabor filter-based event-driven convolution layer which extracted primary visual features of event streams, we used a feature learning layer with unsupervised spiking timing dependent plasticity (STDP) rule to help the network extract frequent salient features, and a feature learning layer with reward-modulated STDP rule to help the network learn diagnostic features. The classification accuracies of the network proposed in this paper on the four benchmark event stream datasets were better than the existing bio-inspired hierarchical SNNs. Moreover, our method showed good classification ability for short event stream input data, and was robust to input event stream noise. The results show that our method can improve the feature extraction and classification performance of this kind of SNNs for event camera object recognition.
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Affiliation(s)
- 茜 周
- 河北工业大学 省部共建电工装备可靠性与智能化国家重点实验室(天津 300130)State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, P. R. China
- 河北工业大学 生命科学与健康工程学院 河北省生物电磁与神经工程重点实验室(天津 300130)Hebei Key Laboratory of Bioelectromagnetics and Neural Engineering, School of Health Sciences and Biomedical Engineering, Hebei University of Technology, Tianjin 300130, P. R. China
- 河北工业大学 生命科学与健康工程学院 天津市生物电工与智能健康重点实验室(天津 300130)Tianjin Key Laboratory of Bioelectricity and Intelligent Health, School of Health Sciences and Biomedical Engineering, Hebei University of Technology, Tianjin 300130, P. R. China
| | - 鹏 郑
- 河北工业大学 省部共建电工装备可靠性与智能化国家重点实验室(天津 300130)State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, P. R. China
- 河北工业大学 生命科学与健康工程学院 河北省生物电磁与神经工程重点实验室(天津 300130)Hebei Key Laboratory of Bioelectromagnetics and Neural Engineering, School of Health Sciences and Biomedical Engineering, Hebei University of Technology, Tianjin 300130, P. R. China
- 河北工业大学 生命科学与健康工程学院 天津市生物电工与智能健康重点实验室(天津 300130)Tianjin Key Laboratory of Bioelectricity and Intelligent Health, School of Health Sciences and Biomedical Engineering, Hebei University of Technology, Tianjin 300130, P. R. China
| | - 小虎 李
- 河北工业大学 省部共建电工装备可靠性与智能化国家重点实验室(天津 300130)State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, P. R. China
- 河北工业大学 生命科学与健康工程学院 河北省生物电磁与神经工程重点实验室(天津 300130)Hebei Key Laboratory of Bioelectromagnetics and Neural Engineering, School of Health Sciences and Biomedical Engineering, Hebei University of Technology, Tianjin 300130, P. R. China
- 河北工业大学 生命科学与健康工程学院 天津市生物电工与智能健康重点实验室(天津 300130)Tianjin Key Laboratory of Bioelectricity and Intelligent Health, School of Health Sciences and Biomedical Engineering, Hebei University of Technology, Tianjin 300130, P. R. China
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17
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Berry AS, Harrison TM. New perspectives on the basal forebrain cholinergic system in Alzheimer's disease. Neurosci Biobehav Rev 2023; 150:105192. [PMID: 37086935 PMCID: PMC10249144 DOI: 10.1016/j.neubiorev.2023.105192] [Citation(s) in RCA: 26] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 02/27/2023] [Accepted: 03/28/2023] [Indexed: 04/24/2023]
Abstract
The basal forebrain cholinergic system (BFCS) has long been implicated in age-related cognitive changes and the pathophysiology of Alzheimer's disease (AD). Limitations of cholinergic interventions helped to inspire a shift away from BFCS in AD research. A resurgence in interest in the BFCS following methodological and analytical advances has resulted in a call for the BFCS to be examined in novel frameworks. We outline the basic structure and function of the BFCS, its role in supporting cognitive and affective function, and its vulnerability to aging and AD. We consider the BFCS in the context of the amyloid hypothesis and evolving concepts in AD research: resilience and resistance to pathology, selective neuronal vulnerability, trans-synaptic pathology spread and sleep health. We highlight 1) the potential role of the BFCS in cognitive resilience, 2) recent work refining understanding about the selective vulnerability of BFCS to AD, 3) BFCS connectivity that suggests it is related to tau spreading and neurodegeneration and 4) the gap between BFCS involvement in AD and sleep-wake cycles.
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Affiliation(s)
| | - Theresa M Harrison
- Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA 94720, USA
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18
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Li XW, Ren Y, Shi DQ, Qi L, Xu F, Xiao Y, Lau PM, Bi GQ. Biphasic Cholinergic Modulation of Reverberatory Activity in Neuronal Networks. Neurosci Bull 2023; 39:731-744. [PMID: 36670292 PMCID: PMC10170002 DOI: 10.1007/s12264-022-01012-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 09/04/2022] [Indexed: 01/22/2023] Open
Abstract
Acetylcholine (ACh) is an important neuromodulator in various cognitive functions. However, it is unclear how ACh influences neural circuit dynamics by altering cellular properties. Here, we investigated how ACh influences reverberatory activity in cultured neuronal networks. We found that ACh suppressed the occurrence of evoked reverberation at low to moderate doses, but to a much lesser extent at high doses. Moreover, high doses of ACh caused a longer duration of evoked reverberation, and a higher occurrence of spontaneous activity. With whole-cell recording from single neurons, we found that ACh inhibited excitatory postsynaptic currents (EPSCs) while elevating neuronal firing in a dose-dependent manner. Furthermore, all ACh-induced cellular and network changes were blocked by muscarinic, but not nicotinic receptor antagonists. With computational modeling, we found that simulated changes in EPSCs and the excitability of single cells mimicking the effects of ACh indeed modulated the evoked network reverberation similar to experimental observations. Thus, ACh modulates network dynamics in a biphasic fashion, probably by inhibiting excitatory synaptic transmission and facilitating neuronal excitability through muscarinic signaling pathways.
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Affiliation(s)
- Xiao-Wei Li
- CAS Key Laboratory of Brain Function and Disease, School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230027, China
| | - Yi Ren
- CAS Key Laboratory of Brain Function and Disease, School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230027, China
| | - Dong-Qing Shi
- CAS Key Laboratory of Brain Function and Disease, School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230027, China
| | - Lei Qi
- CAS Key Laboratory of Brain Function and Disease, School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230027, China
| | - Fang Xu
- CAS Key Laboratory of Brain Connectome and Manipulation, Interdisciplinary Center for Brain Information, the Brain Cognition and Brain Disease Institute (BCBDI), Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences; Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 518055, China
| | - Yanyang Xiao
- CAS Key Laboratory of Brain Connectome and Manipulation, Interdisciplinary Center for Brain Information, the Brain Cognition and Brain Disease Institute (BCBDI), Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences; Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 518055, China.
| | - Pak-Ming Lau
- CAS Key Laboratory of Brain Function and Disease, School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230027, China.
- CAS Key Laboratory of Brain Connectome and Manipulation, Interdisciplinary Center for Brain Information, the Brain Cognition and Brain Disease Institute (BCBDI), Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences; Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 518055, China.
| | - Guo-Qiang Bi
- CAS Key Laboratory of Brain Function and Disease, School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230027, China
- CAS Key Laboratory of Brain Connectome and Manipulation, Interdisciplinary Center for Brain Information, the Brain Cognition and Brain Disease Institute (BCBDI), Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences; Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 518055, China
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19
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Scott DN, Frank MJ. Adaptive control of synaptic plasticity integrates micro- and macroscopic network function. Neuropsychopharmacology 2023; 48:121-144. [PMID: 36038780 PMCID: PMC9700774 DOI: 10.1038/s41386-022-01374-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 06/23/2022] [Accepted: 06/24/2022] [Indexed: 11/09/2022]
Abstract
Synaptic plasticity configures interactions between neurons and is therefore likely to be a primary driver of behavioral learning and development. How this microscopic-macroscopic interaction occurs is poorly understood, as researchers frequently examine models within particular ranges of abstraction and scale. Computational neuroscience and machine learning models offer theoretically powerful analyses of plasticity in neural networks, but results are often siloed and only coarsely linked to biology. In this review, we examine connections between these areas, asking how network computations change as a function of diverse features of plasticity and vice versa. We review how plasticity can be controlled at synapses by calcium dynamics and neuromodulatory signals, the manifestation of these changes in networks, and their impacts in specialized circuits. We conclude that metaplasticity-defined broadly as the adaptive control of plasticity-forges connections across scales by governing what groups of synapses can and can't learn about, when, and to what ends. The metaplasticity we discuss acts by co-opting Hebbian mechanisms, shifting network properties, and routing activity within and across brain systems. Asking how these operations can go awry should also be useful for understanding pathology, which we address in the context of autism, schizophrenia and Parkinson's disease.
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Affiliation(s)
- Daniel N Scott
- Cognitive Linguistic, and Psychological Sciences, Brown University, Providence, RI, USA.
- Carney Institute for Brain Science, Brown University, Providence, RI, USA.
| | - Michael J Frank
- Cognitive Linguistic, and Psychological Sciences, Brown University, Providence, RI, USA.
- Carney Institute for Brain Science, Brown University, Providence, RI, USA.
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20
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Continuous cholinergic-dopaminergic updating in the nucleus accumbens underlies approaches to reward-predicting cues. Nat Commun 2022; 13:7924. [PMID: 36564387 PMCID: PMC9789106 DOI: 10.1038/s41467-022-35601-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Accepted: 12/13/2022] [Indexed: 12/25/2022] Open
Abstract
The ability to learn Pavlovian associations from environmental cues predicting positive outcomes is critical for survival, motivating adaptive behaviours. This cued-motivated behaviour depends on the nucleus accumbens (NAc). NAc output activity mediated by spiny projecting neurons (SPNs) is regulated by dopamine, but also by cholinergic interneurons (CINs), which can release acetylcholine and glutamate via the activity of the vesicular acetylcholine transporter (VAChT) or the vesicular glutamate transporter (VGLUT3), respectively. Here we investigated behavioural and neurochemical changes in mice performing a touchscreen Pavlovian approach task by recording dopamine, acetylcholine, and calcium dynamics from D1- and D2-SPNs using fibre photometry in control, VAChT or VGLUT3 mutant mice to understand how these signals cooperate in the service of approach behaviours toward reward-predicting cues. We reveal that NAc acetylcholine-dopaminergic signalling is continuously updated to regulate striatal output underlying the acquisition of Pavlovian approach learning toward reward-predicting cues.
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21
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Lehr AB, Luboeinski J, Tetzlaff C. Neuromodulator-dependent synaptic tagging and capture retroactively controls neural coding in spiking neural networks. Sci Rep 2022; 12:17772. [PMID: 36273097 PMCID: PMC9588040 DOI: 10.1038/s41598-022-22430-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Accepted: 10/14/2022] [Indexed: 01/19/2023] Open
Abstract
Events that are important to an individual's life trigger neuromodulator release in brain areas responsible for cognitive and behavioral function. While it is well known that the presence of neuromodulators such as dopamine and norepinephrine is required for memory consolidation, the impact of neuromodulator concentration is, however, less understood. In a recurrent spiking neural network model featuring neuromodulator-dependent synaptic tagging and capture, we study how synaptic memory consolidation depends on the amount of neuromodulator present in the minutes to hours after learning. We find that the storage of rate-based and spike timing-based information is controlled by the level of neuromodulation. Specifically, we find better recall of temporal information for high levels of neuromodulation, while we find better recall of rate-coded spatial patterns for lower neuromodulation, mediated by the selection of different groups of synapses for consolidation. Hence, our results indicate that in minutes to hours after learning, the level of neuromodulation may alter the process of synaptic consolidation to ultimately control which type of information becomes consolidated in the recurrent neural network.
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Affiliation(s)
- Andrew B. Lehr
- grid.7450.60000 0001 2364 4210Department of Computational Neuroscience, University of Göttingen, Göttingen, Germany ,grid.7450.60000 0001 2364 4210Bernstein Center for Computational Neuroscience, University of Göttingen, Göttingen, Germany ,grid.7450.60000 0001 2364 4210Department of Computational Synaptic Physiology, University of Göttingen, Göttingen, Germany
| | - Jannik Luboeinski
- grid.7450.60000 0001 2364 4210Department of Computational Neuroscience, University of Göttingen, Göttingen, Germany ,grid.7450.60000 0001 2364 4210Bernstein Center for Computational Neuroscience, University of Göttingen, Göttingen, Germany ,grid.7450.60000 0001 2364 4210Department of Computational Synaptic Physiology, University of Göttingen, Göttingen, Germany
| | - Christian Tetzlaff
- grid.7450.60000 0001 2364 4210Department of Computational Neuroscience, University of Göttingen, Göttingen, Germany ,grid.7450.60000 0001 2364 4210Bernstein Center for Computational Neuroscience, University of Göttingen, Göttingen, Germany ,grid.7450.60000 0001 2364 4210Department of Computational Synaptic Physiology, University of Göttingen, Göttingen, Germany
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22
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Antonov DI, Sviatov KV, Sukhov S. Continuous learning of spiking networks trained with local rules. Neural Netw 2022; 155:512-522. [PMID: 36166978 DOI: 10.1016/j.neunet.2022.09.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Revised: 06/29/2022] [Accepted: 09/02/2022] [Indexed: 10/31/2022]
Abstract
Artificial neural networks (ANNs) experience catastrophic forgetting (CF) during sequential learning. In contrast, the brain can learn continuously without any signs of catastrophic forgetting. Spiking neural networks (SNNs) are the next generation of ANNs with many features borrowed from biological neural networks. Thus, SNNs potentially promise better resilience to CF. In this paper, we study the susceptibility of SNNs to CF and test several biologically inspired methods for mitigating catastrophic forgetting. SNNs are trained with biologically plausible local training rules based on spike-timing-dependent plasticity (STDP). Local training prohibits the direct use of CF prevention methods based on gradients of a global loss function. We developed and tested the method to determine the importance of synapses (weights) based on stochastic Langevin dynamics without the need for the gradients. Several other methods of catastrophic forgetting prevention adapted from analog neural networks were tested as well. The experiments were performed on freely available datasets in the SpykeTorch environment.
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Affiliation(s)
- D I Antonov
- Kotelnikov Institute of Radio Engineering and Electronics of Russian Academy of Sciences (Ulyanovsk branch), 48/2 Goncharov Str., Ulyanovsk 432071, Russia.
| | - K V Sviatov
- Ulyanovsk State Technical University, 32 Severny Venets, Ulyanovsk 432027, Russia.
| | - S Sukhov
- Kotelnikov Institute of Radio Engineering and Electronics of Russian Academy of Sciences (Ulyanovsk branch), 48/2 Goncharov Str., Ulyanovsk 432071, Russia.
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23
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Sakai Y, Sakai Y, Abe Y, Narumoto J, Tanaka SC. Memory trace imbalance in reinforcement and punishment systems can reinforce implicit choices leading to obsessive-compulsive behavior. Cell Rep 2022; 40:111275. [PMID: 36044850 DOI: 10.1016/j.celrep.2022.111275] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 06/09/2022] [Accepted: 08/05/2022] [Indexed: 11/03/2022] Open
Abstract
We may view most of our daily activities as rational action selections; however, we sometimes reinforce maladaptive behaviors despite having explicit environmental knowledge. In this study, we model obsessive-compulsive disorder (OCD) symptoms as implicitly learned maladaptive behaviors. Simulations in the reinforcement learning framework show that agents implicitly learn to respond to intrusive thoughts when the memory trace signal for past actions decays differently for positive and negative prediction errors. Moreover, this model extends our understanding of therapeutic effects of behavioral therapy in OCD. Using empirical data, we confirm that patients with OCD show extremely imbalanced traces, which are normalized by serotonin enhancers. We find that healthy participants also vary in their obsessive-compulsive tendencies, consistent with the degree of imbalanced traces. These behavioral characteristics can be generalized to variations in the healthy population beyond the spectrum of clinical phenotypes.
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Affiliation(s)
- Yuki Sakai
- ATR Brain Information Communication Research Laboratory Group, 2-2-2 Hikaridai Seika-Cho, Soraku-Gun, Kyoto 619-0288, Japan; Department of Psychiatry, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, 465 Kajii-Cho, Kawaramachi-Hirokoji, Kamigyo-Ku, Kyoto 602-8566, Japan
| | - Yutaka Sakai
- Brain Science Institute, Tamagawa University, 6-1-1, Tamagawa-Gakuen, Machida, Tokyo 194-8610, Japan
| | - Yoshinari Abe
- Department of Psychiatry, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, 465 Kajii-Cho, Kawaramachi-Hirokoji, Kamigyo-Ku, Kyoto 602-8566, Japan
| | - Jin Narumoto
- Department of Psychiatry, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, 465 Kajii-Cho, Kawaramachi-Hirokoji, Kamigyo-Ku, Kyoto 602-8566, Japan
| | - Saori C Tanaka
- ATR Brain Information Communication Research Laboratory Group, 2-2-2 Hikaridai Seika-Cho, Soraku-Gun, Kyoto 619-0288, Japan; Division of Information Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama-Cho, Ikoma, Nara 630-0192, Japan.
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24
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Hong SZ, Mesik L, Grossman CD, Cohen JY, Lee B, Severin D, Lee HK, Hell JW, Kirkwood A. Norepinephrine potentiates and serotonin depresses visual cortical responses by transforming eligibility traces. Nat Commun 2022; 13:3202. [PMID: 35680879 PMCID: PMC9184610 DOI: 10.1038/s41467-022-30827-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Accepted: 05/19/2022] [Indexed: 11/18/2022] Open
Abstract
Reinforcement allows organisms to learn which stimuli predict subsequent biological relevance. Hebbian mechanisms of synaptic plasticity are insufficient to account for reinforced learning because neuromodulators signaling biological relevance are delayed with respect to the neural activity associated with the stimulus. A theoretical solution is the concept of eligibility traces (eTraces), silent synaptic processes elicited by activity which upon arrival of a neuromodulator are converted into a lasting change in synaptic strength. Previously we demonstrated in visual cortical slices the Hebbian induction of eTraces and their conversion into LTP and LTD by the retroactive action of norepinephrine and serotonin Here we show in vivo in mouse V1 that the induction of eTraces and their conversion to LTP/D by norepinephrine and serotonin respectively potentiates and depresses visual responses. We also show that the integrity of this process is crucial for ocular dominance plasticity, a canonical model of experience-dependent plasticity.
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Affiliation(s)
- Su Z Hong
- Mind/Brain Institute, Johns Hopkins University, Baltimore, MD, 21218, USA
| | - Lukas Mesik
- Mind/Brain Institute, Johns Hopkins University, Baltimore, MD, 21218, USA
| | - Cooper D Grossman
- Department of Neuroscience, Johns Hopkins University, Baltimore, MD, 21205, USA
| | - Jeremiah Y Cohen
- Department of Neuroscience, Johns Hopkins University, Baltimore, MD, 21205, USA
| | - Boram Lee
- Department of Pharmacology, University of California at Davis, Davis, CA, 95616, USA
| | - Daniel Severin
- Mind/Brain Institute, Johns Hopkins University, Baltimore, MD, 21218, USA
| | - Hey-Kyoung Lee
- Mind/Brain Institute, Johns Hopkins University, Baltimore, MD, 21218, USA
- Department of Neuroscience, Johns Hopkins University, Baltimore, MD, 21205, USA
| | - Johannes W Hell
- Department of Pharmacology, University of California at Davis, Davis, CA, 95616, USA
| | - Alfredo Kirkwood
- Mind/Brain Institute, Johns Hopkins University, Baltimore, MD, 21218, USA.
- Department of Neuroscience, Johns Hopkins University, Baltimore, MD, 21205, USA.
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25
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Fuchsberger T, Paulsen O. Modulation of hippocampal plasticity in learning and memory. Curr Opin Neurobiol 2022; 75:102558. [PMID: 35660989 DOI: 10.1016/j.conb.2022.102558] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 04/15/2022] [Accepted: 04/25/2022] [Indexed: 11/17/2022]
Abstract
Synaptic plasticity plays a central role in the study of neural mechanisms of learning and memory. Plasticity rules are not invariant over time but are under neuromodulatory control, enabling behavioral states to influence memory formation. Neuromodulation controls synaptic plasticity at network level by directing information flow, at circuit level through changes in excitation/inhibition balance, and at synaptic level through modulation of intracellular signaling cascades. Although most research has focused on modulation of principal neurons, recent progress has uncovered important roles for interneurons in not only routing information, but also setting conditions for synaptic plasticity. Moreover, astrocytes have been shown to both gate and mediate plasticity. These additional mechanisms must be considered for a comprehensive mechanistic understanding of learning and memory.
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Affiliation(s)
- Tanja Fuchsberger
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, UK
| | - Ole Paulsen
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, UK.
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26
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Anwar H, Caby S, Dura-Bernal S, D’Onofrio D, Hasegan D, Deible M, Grunblatt S, Chadderdon GL, Kerr CC, Lakatos P, Lytton WW, Hazan H, Neymotin SA. Training a spiking neuronal network model of visual-motor cortex to play a virtual racket-ball game using reinforcement learning. PLoS One 2022; 17:e0265808. [PMID: 35544518 PMCID: PMC9094569 DOI: 10.1371/journal.pone.0265808] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Accepted: 03/08/2022] [Indexed: 11/18/2022] Open
Abstract
Recent models of spiking neuronal networks have been trained to perform behaviors in static environments using a variety of learning rules, with varying degrees of biological realism. Most of these models have not been tested in dynamic visual environments where models must make predictions on future states and adjust their behavior accordingly. The models using these learning rules are often treated as black boxes, with little analysis on circuit architectures and learning mechanisms supporting optimal performance. Here we developed visual/motor spiking neuronal network models and trained them to play a virtual racket-ball game using several reinforcement learning algorithms inspired by the dopaminergic reward system. We systematically investigated how different architectures and circuit-motifs (feed-forward, recurrent, feedback) contributed to learning and performance. We also developed a new biologically-inspired learning rule that significantly enhanced performance, while reducing training time. Our models included visual areas encoding game inputs and relaying the information to motor areas, which used this information to learn to move the racket to hit the ball. Neurons in the early visual area relayed information encoding object location and motion direction across the network. Neuronal association areas encoded spatial relationships between objects in the visual scene. Motor populations received inputs from visual and association areas representing the dorsal pathway. Two populations of motor neurons generated commands to move the racket up or down. Model-generated actions updated the environment and triggered reward or punishment signals that adjusted synaptic weights so that the models could learn which actions led to reward. Here we demonstrate that our biologically-plausible learning rules were effective in training spiking neuronal network models to solve problems in dynamic environments. We used our models to dissect the circuit architectures and learning rules most effective for learning. Our model shows that learning mechanisms involving different neural circuits produce similar performance in sensory-motor tasks. In biological networks, all learning mechanisms may complement one another, accelerating the learning capabilities of animals. Furthermore, this also highlights the resilience and redundancy in biological systems.
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Affiliation(s)
- Haroon Anwar
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
| | - Simon Caby
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
| | - Salvador Dura-Bernal
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
- Dept. Physiology & Pharmacology, State University of New York Downstate, Brooklyn, New York, United States of America
| | - David D’Onofrio
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
| | - Daniel Hasegan
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
| | - Matt Deible
- University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America
| | - Sara Grunblatt
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
| | - George L. Chadderdon
- Dept. Physiology & Pharmacology, State University of New York Downstate, Brooklyn, New York, United States of America
| | - Cliff C. Kerr
- Dept Physics, University of Sydney, Sydney, Australia
- Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America
| | - Peter Lakatos
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
- Dept. Psychiatry, NYU Grossman School of Medicine, New York, New York, United States of America
| | - William W. Lytton
- Dept. Physiology & Pharmacology, State University of New York Downstate, Brooklyn, New York, United States of America
- Dept Neurology, Kings County Hospital Center, Brooklyn, New York, United States of America
| | - Hananel Hazan
- Dept of Biology, Tufts University, Medford, Massachusetts, United States of America
| | - Samuel A. Neymotin
- Center for Biomedical Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, New York, United States of America
- Dept. Psychiatry, NYU Grossman School of Medicine, New York, New York, United States of America
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27
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Chalcogenide optomemristors for multi-factor neuromorphic computation. Nat Commun 2022; 13:2247. [PMID: 35474061 PMCID: PMC9042832 DOI: 10.1038/s41467-022-29870-9] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 04/04/2022] [Indexed: 11/09/2022] Open
Abstract
Neuromorphic hardware that emulates biological computations is a key driver of progress in AI. For example, memristive technologies, including chalcogenide-based in-memory computing concepts, have been employed to dramatically accelerate and increase the efficiency of basic neural operations. However, powerful mechanisms such as reinforcement learning and dendritic computation require more advanced device operations involving multiple interacting signals. Here we show that nano-scaled films of chalcogenide semiconductors can perform such multi-factor in-memory computation where their tunable electronic and optical properties are jointly exploited. We demonstrate that ultrathin photoactive cavities of Ge-doped Selenide can emulate synapses with three-factor neo-Hebbian plasticity and dendrites with shunting inhibition. We apply these properties to solve a maze game through on-device reinforcement learning, as well as to provide a single-neuron solution to linearly inseparable XOR implementation. Some types of machine learning rely on the interaction between multiple signals, which requires new devices for efficient implementation. Here, Sarwat et al demonstrate a memristor that is both optically and electronically active, enabling computational models such as three factor learning.
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28
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Wert-Carvajal C, Reneaux M, Tchumatchenko T, Clopath C. Dopamine and serotonin interplay for valence-based spatial learning. Cell Rep 2022; 39:110645. [PMID: 35417691 DOI: 10.1016/j.celrep.2022.110645] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 10/31/2021] [Accepted: 03/17/2022] [Indexed: 11/17/2022] Open
Abstract
Dopamine (DA) and serotonin (5-HT) are important neuromodulators of synaptic plasticity that have been linked to learning from positive or negative outcomes or valence-based learning. In the hippocampus, both affect long-term plasticity but play different roles in encoding uncertainty or predicted reward. DA has been related to positive valence, from reward consumption or avoidance behavior, and 5-HT to aversive encoding. We propose DA produces overall LTP while 5-HT elicits LTD. Here, we compare two reward-modulated spike timing-dependent plasticity (R-STDP) rules to describe the action of these neuromodulators. We examined their role in cognitive performance and flexibility for computational models of the Morris water maze task and reversal learning. Our results show that the interplay of DA and 5-HT improves learning performance and can explain experimental evidence. This study reinforces the importance of neuromodulation in determining the direction of plasticity.
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Affiliation(s)
- Carlos Wert-Carvajal
- Bioengineering Department, Imperial College London, London SW7 2AZ, UK; Theory of Neural Dynamics Group, Max Planck Institute for Brain Research, 60438 Frankfurt, Germany; Institute of Experimental Epileptology and Cognition Research, Life and Brain Center, University of Bonn Medical Center, 53127 Bonn, Germany
| | - Melissa Reneaux
- Bioengineering Department, Imperial College London, London SW7 2AZ, UK
| | - Tatjana Tchumatchenko
- Theory of Neural Dynamics Group, Max Planck Institute for Brain Research, 60438 Frankfurt, Germany; Institute of Experimental Epileptology and Cognition Research, Life and Brain Center, University of Bonn Medical Center, 53127 Bonn, Germany; Institute of Physiological Chemistry, University of Mainz Medical Center, 55131 Mainz, Germany.
| | - Claudia Clopath
- Bioengineering Department, Imperial College London, London SW7 2AZ, UK.
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29
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Triche A, Maida AS, Kumar A. Exploration in neo-Hebbian reinforcement learning: Computational approaches to the exploration-exploitation balance with bio-inspired neural networks. Neural Netw 2022; 151:16-33. [DOI: 10.1016/j.neunet.2022.03.021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 03/08/2022] [Accepted: 03/14/2022] [Indexed: 10/18/2022]
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30
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Kumar MG, Tan C, Libedinsky C, Yen SC, Tan AYY. A Nonlinear Hidden Layer Enables Actor-Critic Agents to Learn Multiple Paired Association Navigation. Cereb Cortex 2022; 32:3917-3936. [PMID: 35034127 DOI: 10.1093/cercor/bhab456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2021] [Revised: 11/05/2021] [Accepted: 11/06/2021] [Indexed: 11/15/2022] Open
Abstract
Navigation to multiple cued reward locations has been increasingly used to study rodent learning. Though deep reinforcement learning agents have been shown to be able to learn the task, they are not biologically plausible. Biologically plausible classic actor-critic agents have been shown to learn to navigate to single reward locations, but which biologically plausible agents are able to learn multiple cue-reward location tasks has remained unclear. In this computational study, we show versions of classic agents that learn to navigate to a single reward location, and adapt to reward location displacement, but are not able to learn multiple paired association navigation. The limitation is overcome by an agent in which place cell and cue information are first processed by a feedforward nonlinear hidden layer with synapses to the actor and critic subject to temporal difference error-modulated plasticity. Faster learning is obtained when the feedforward layer is replaced by a recurrent reservoir network.
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Affiliation(s)
- M Ganesh Kumar
- Integrative Sciences and Engineering Programme, NUS Graduate School, National University of Singapore, Singapore 119077, Singapore
- The N.1 Institute for Health, National University of Singapore, Singapore 117456, Singapore
- Innovation and Design Programme, Faculty of Engineering, National University of Singapore, Singapore 117579, Singapore
| | - Cheston Tan
- Institute for Infocomm Research, Agency for Science, Technology and Research, Singapore 138632, Singapore
| | - Camilo Libedinsky
- Integrative Sciences and Engineering Programme, NUS Graduate School, National University of Singapore, Singapore 119077, Singapore
- The N.1 Institute for Health, National University of Singapore, Singapore 117456, Singapore
- Department of Psychology, National University of Singapore, Singapore 117570, Singapore
- Institute of Molecular and Cell Biology, Agency for Science, Technology and Research, Singapore 138673, Singapore
| | - Shih-Cheng Yen
- Integrative Sciences and Engineering Programme, NUS Graduate School, National University of Singapore, Singapore 119077, Singapore
- The N.1 Institute for Health, National University of Singapore, Singapore 117456, Singapore
- Innovation and Design Programme, Faculty of Engineering, National University of Singapore, Singapore 117579, Singapore
| | - Andrew Y Y Tan
- Department of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117593, Singapore
- Healthy Longevity Translational Research Programme, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 119228, Singapore
- Cardiovascular Disease Translational Research Programme, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 119228, Singapore
- Neurobiology Programme, Life Sciences Institute, National University of Singapore, Singapore 119077, Singapore
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31
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Isomura T, Shimazaki H, Friston KJ. Canonical neural networks perform active inference. Commun Biol 2022; 5:55. [PMID: 35031656 PMCID: PMC8760273 DOI: 10.1038/s42003-021-02994-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Accepted: 12/21/2021] [Indexed: 12/03/2022] Open
Abstract
This work considers a class of canonical neural networks comprising rate coding models, wherein neural activity and plasticity minimise a common cost function-and plasticity is modulated with a certain delay. We show that such neural networks implicitly perform active inference and learning to minimise the risk associated with future outcomes. Mathematical analyses demonstrate that this biological optimisation can be cast as maximisation of model evidence, or equivalently minimisation of variational free energy, under the well-known form of a partially observed Markov decision process model. This equivalence indicates that the delayed modulation of Hebbian plasticity-accompanied with adaptation of firing thresholds-is a sufficient neuronal substrate to attain Bayes optimal inference and control. We corroborated this proposition using numerical analyses of maze tasks. This theory offers a universal characterisation of canonical neural networks in terms of Bayesian belief updating and provides insight into the neuronal mechanisms underlying planning and adaptive behavioural control.
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Affiliation(s)
- Takuya Isomura
- Brain Intelligence Theory Unit, RIKEN Center for Brain Science, Wako, Saitama, 351-0198, Japan.
| | - Hideaki Shimazaki
- Center for Human Nature, Artificial Intelligence, and Neuroscience (CHAIN), Hokkaido University, Sapporo, Hokkaido, 060-0812, Japan
| | - Karl J Friston
- Wellcome Centre for Human Neuroimaging, Institute of Neurology, University College London, 12 Queen Square, London, WC1N 3AR, UK
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32
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Isomura T. Active inference leads to Bayesian neurophysiology. Neurosci Res 2021; 175:38-45. [PMID: 34968557 DOI: 10.1016/j.neures.2021.12.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 12/13/2021] [Accepted: 12/14/2021] [Indexed: 01/20/2023]
Abstract
The neuronal substrates that implement the free-energy principle and ensuing active inference at the neuron and synapse level have not been fully elucidated. This Review considers possible neuronal substrates underlying the principle. First, the foundations of the free-energy principle are introduced, and then its ability to empirically explain various brain functions and psychological and biological phenomena in terms of Bayesian inference is described. Mathematically, the dynamics of neural activity and plasticity that minimise a cost function can be cast as performing Bayesian inference that minimises variational free energy. This equivalence licenses the adoption of the free-energy principle as a universal characterisation of neural networks. Further, the neural network structure itself represents a generative model under which an agent operates. A virtue of this perspective is that it enables the formal association of neural network properties with prior beliefs that regulate inference and learning. The possible neuronal substrates that implement prior beliefs and how to empirically examine the theory are discussed. This perspective renders brain activity explainable, leading to a deeper understanding of the neuronal mechanisms underlying basic psychology and psychiatric disorders in terms of an implicit generative model.
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Affiliation(s)
- Takuya Isomura
- Brain Intelligence Theory Unit, RIKEN Center for Brain Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.
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33
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Milstein AD, Li Y, Bittner KC, Grienberger C, Soltesz I, Magee JC, Romani S. Bidirectional synaptic plasticity rapidly modifies hippocampal representations. eLife 2021; 10:e73046. [PMID: 34882093 PMCID: PMC8776257 DOI: 10.7554/elife.73046] [Citation(s) in RCA: 60] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2021] [Accepted: 12/08/2021] [Indexed: 11/13/2022] Open
Abstract
Learning requires neural adaptations thought to be mediated by activity-dependent synaptic plasticity. A relatively non-standard form of synaptic plasticity driven by dendritic calcium spikes, or plateau potentials, has been reported to underlie place field formation in rodent hippocampal CA1 neurons. Here, we found that this behavioral timescale synaptic plasticity (BTSP) can also reshape existing place fields via bidirectional synaptic weight changes that depend on the temporal proximity of plateau potentials to pre-existing place fields. When evoked near an existing place field, plateau potentials induced less synaptic potentiation and more depression, suggesting BTSP might depend inversely on postsynaptic activation. However, manipulations of place cell membrane potential and computational modeling indicated that this anti-correlation actually results from a dependence on current synaptic weight such that weak inputs potentiate and strong inputs depress. A network model implementing this bidirectional synaptic learning rule suggested that BTSP enables population activity, rather than pairwise neuronal correlations, to drive neural adaptations to experience.
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Affiliation(s)
- Aaron D Milstein
- Department of Neurosurgery and Stanford Neurosciences Institute, Stanford University School of MedicineStanfordUnited States
- Department of Neuroscience and Cell Biology, Robert Wood Johnson Medical School and Center for Advanced Biotechnology and Medicine, Rutgers UniversityPiscatawayUnited States
| | - Yiding Li
- Howard Hughes Medical Institute, Baylor College of MedicineHoustonUnited States
| | - Katie C Bittner
- Howard Hughes Medical Institute, Janelia Research CampusAshburnUnited States
| | | | - Ivan Soltesz
- Department of Neurosurgery and Stanford Neurosciences Institute, Stanford University School of MedicineStanfordUnited States
| | - Jeffrey C Magee
- Howard Hughes Medical Institute, Baylor College of MedicineHoustonUnited States
| | - Sandro Romani
- Howard Hughes Medical Institute, Janelia Research CampusAshburnUnited States
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34
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张 慧, 徐 桂, 郭 嘉, 郭 磊. [A review of brain-like spiking neural network and its neuromorphic chip research]. SHENG WU YI XUE GONG CHENG XUE ZA ZHI = JOURNAL OF BIOMEDICAL ENGINEERING = SHENGWU YIXUE GONGCHENGXUE ZAZHI 2021; 38:986-994. [PMID: 34713667 PMCID: PMC9927433 DOI: 10.7507/1001-5515.202011005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 05/14/2021] [Indexed: 11/03/2022]
Abstract
Under the current situation of the rapid development of brain-like artificial intelligence and the increasingly complex electromagnetic environment, the most bionic and anti-interference spiking neural network has shown great potential in computing speed, real-time information processing, and spatiotemporal data processing. Spiking neural network is the core part of brain-like artificial intelligence, which realizes brain-like computing by simulating the structure of biological neural network and the way of information transmission. This article first summarizes the advantages and disadvantages of the five models, and analyzes the characteristics of several network topologies. Then, it summarizes the spiking neural network algorithms. The unsupervised learning based on spike timing dependent plasticity (STDP) rules and four types of supervised learning algorithms are analyzed. Finally, the research on brain-like neuromorphic chips at home and abroad are reviewed. This paper aims to provide learning ideas and research directions for new colleagues in the field of spiking neural network.
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Affiliation(s)
- 慧港 张
- 河北工业大学 省部共建电工装备可靠性与智能化国家重点实验室(天津 300130)State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 天津市生物电工与智能健康重点实验室(天津 300130)Tianjin Key Laboratory of Bioelectromagnetic Technology and Intelligent Health, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 河北省生物电磁与神经工程重点实验室(天津 300130)Hebei Key Laboratory of Bioelectromagnetics and Neuroengineering, Hebei University of Technology, Tianjin 300130, P.R.China
| | - 桂芝 徐
- 河北工业大学 省部共建电工装备可靠性与智能化国家重点实验室(天津 300130)State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 天津市生物电工与智能健康重点实验室(天津 300130)Tianjin Key Laboratory of Bioelectromagnetic Technology and Intelligent Health, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 河北省生物电磁与神经工程重点实验室(天津 300130)Hebei Key Laboratory of Bioelectromagnetics and Neuroengineering, Hebei University of Technology, Tianjin 300130, P.R.China
| | - 嘉荣 郭
- 河北工业大学 省部共建电工装备可靠性与智能化国家重点实验室(天津 300130)State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 天津市生物电工与智能健康重点实验室(天津 300130)Tianjin Key Laboratory of Bioelectromagnetic Technology and Intelligent Health, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 河北省生物电磁与神经工程重点实验室(天津 300130)Hebei Key Laboratory of Bioelectromagnetics and Neuroengineering, Hebei University of Technology, Tianjin 300130, P.R.China
| | - 磊 郭
- 河北工业大学 省部共建电工装备可靠性与智能化国家重点实验室(天津 300130)State Key Laboratory of Reliability and Intelligence of Electrical Equipment, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 天津市生物电工与智能健康重点实验室(天津 300130)Tianjin Key Laboratory of Bioelectromagnetic Technology and Intelligent Health, Hebei University of Technology, Tianjin 300130, P.R.China
- 河北工业大学 河北省生物电磁与神经工程重点实验室(天津 300130)Hebei Key Laboratory of Bioelectromagnetics and Neuroengineering, Hebei University of Technology, Tianjin 300130, P.R.China
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35
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Mihalas S, Ardiles A, He K, Palacios A, Kirkwood A. A Multisubcellular Compartment Model of AMPA Receptor Trafficking for Neuromodulation of Hebbian Synaptic Plasticity. Front Synaptic Neurosci 2021; 13:703621. [PMID: 34456706 PMCID: PMC8385783 DOI: 10.3389/fnsyn.2021.703621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Accepted: 07/05/2021] [Indexed: 11/13/2022] Open
Abstract
Neuromodulation can profoundly impact the gain and polarity of postsynaptic changes in Hebbian synaptic plasticity. An emerging pattern observed in multiple central synapses is a pull–push type of control in which activation of receptors coupled to the G-protein Gs promote long-term potentiation (LTP) at the expense of long-term depression (LTD), whereas receptors coupled to Gq promote LTD at the expense of LTP. Notably, coactivation of both Gs- and Gq-coupled receptors enhances the gain of both LTP and LTD. To account for these observations, we propose a simple kinetic model in which AMPA receptors (AMPARs) are trafficked between multiple subcompartments in and around the postsynaptic spine. In the model AMPARs in the postsynaptic density compartment (PSD) are the primary contributors to synaptic conductance. During LTP induction, AMPARs are trafficked to the PSD primarily from a relatively small perisynaptic (peri-PSD) compartment. Gs-coupled receptors promote LTP by replenishing peri-PSD through increased AMPAR exocytosis from a pool of endocytic AMPAR. During LTD induction AMPARs are trafficked in the reverse direction, from the PSD to the peri-PSD compartment, and Gq-coupled receptors promote LTD by clearing the peri-PSD compartment through increased AMPAR endocytosis. We claim that the model not only captures essential features of the pull–push neuromodulation of synaptic plasticity, but it is also consistent with other actions of neuromodulators observed in slice experiments and is compatible with the current understanding of AMPAR trafficking.
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Affiliation(s)
- Stefan Mihalas
- Allen Institute for Brain Science, Seattle, WA, United States
| | - Alvaro Ardiles
- Centro Interdisciplinario de Neurociencia de Valparaíso, Facultad de Ciencias, Universidad de Valparaíso, Valparaíso, Chile.,Centro de Neurología Traslacional, Facultad de Medicina, Universidad de Valparaíso, Valparaíso, Chile
| | - Kaiwen He
- Mind Brain Institute, Johns Hopkins University, Baltimore, MD, United States
| | - Adrian Palacios
- Centro Interdisciplinario de Neurociencia de Valparaíso, Facultad de Ciencias, Universidad de Valparaíso, Valparaíso, Chile
| | - Alfredo Kirkwood
- Mind Brain Institute, Johns Hopkins University, Baltimore, MD, United States
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36
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Schmalz JT, Kumar G. A computational model of dopaminergic modulation of hippocampal Schaffer collateral-CA1 long-term plasticity. J Comput Neurosci 2021; 50:51-90. [PMID: 34431067 DOI: 10.1007/s10827-021-00793-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Revised: 05/14/2021] [Accepted: 05/28/2021] [Indexed: 10/20/2022]
Abstract
Dopamine plays a critical role in modulating the long-term synaptic plasticity of the hippocampal Schaffer collateral-CA1 pyramidal neuron synapses (SC-CA1), a widely accepted cellular model of learning and memory. Limited results from hippocampal slice experiments over the last four decades have shown that the timing of the activation of dopamine D1/D5 receptors relative to a high/low-frequency stimulation (HFS/LFS) in SC-CA1 synapses regulates the modulation of HFS/LFS-induced long-term potentiation/depression (LTP/LTD) in these synapses. However, the existing literature lacks a complete picture of how various concentrations of D1/D5 agonists and the relative timing between the activation of D1/D5 receptors and LTP/LTD induction by HFS/LFS, affect the spatiotemporal modulation of SC-CA1 synaptic dynamics. In this paper, we have developed a computational model, a first of its kind, to make quantitative predictions of the temporal dose-dependent modulation of the HFS/LFS induced LTP/LTD in SC-CA1 synapses by various D1/D5 agonists. Our model combines the biochemical effects with the electrical effects at the electrophysiological level. We have estimated the model parameters from the published electrophysiological data, available from diverse hippocampal CA1 slice experiments, in a Bayesian framework. Our modeling results demonstrate the capability of our model in making quantitative predictions of the available experimental results under diverse HFS/LFS protocols. The predictions from our model show a strong nonlinear dependency of the modulated LTP/LTD by D1/D5 agonists on the relative timing between the activated D1/D5 receptors and the HFS/LFS protocol and the applied concentration of D1/D5 agonists.
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37
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Pancotti L, Topolnik L. Cholinergic Modulation of Dendritic Signaling in Hippocampal GABAergic Inhibitory Interneurons. Neuroscience 2021; 489:44-56. [PMID: 34129910 DOI: 10.1016/j.neuroscience.2021.06.011] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Revised: 06/03/2021] [Accepted: 06/07/2021] [Indexed: 12/11/2022]
Abstract
Dendrites represent the "reception hub" of the neuron as they collect thousands of different inputs and send a coherent response to the cell body. A considerable portion of these signals, especially in vivo, arises from neuromodulatory sources, which affect dendritic computations and cellular activity. In this context, acetylcholine (ACh) exerts a coordinating role of different brain structures, contributing to goal-driven behaviors and sleep-wake cycles. Specifically, cholinergic neurons from the medial septum-diagonal band of Broca complex send numerous projections to glutamatergic principal cells and GABAergic inhibitory neurons in the hippocampus, differentially entraining them during network oscillations. Interneurons display abundant expression of cholinergic receptors and marked responses to stimulation by ACh. Nonetheless, the precise localization of ACh inputs is largely unknown, and evidence for cholinergic modulation of interneuronal dendritic signaling remains elusive. In this article, we review evidence that suggests modulatory effects of ACh on dendritic computations in three hippocampal interneuron subtypes: fast-spiking parvalbumin-positive (PV+) cells, somatostatin-expressing (SOM+) oriens lacunosum moleculare cells and vasoactive intestinal polypeptide-expressing (VIP+) interneuron-selective interneurons. We consider the distribution of cholinergic receptors on these interneurons, including information about their specific somatodendritic location, and discuss how the action of these receptors can modulate dendritic Ca2+ signaling and activity of interneurons. The implications of ACh-dependent Ca2+ signaling for dendritic plasticity are also discussed. We propose that cholinergic modulation can shape the dendritic integration and plasticity in interneurons in a cell type-specific manner, and the elucidation of these mechanisms will be required to understand the contribution of each cell type to large-scale network activity.
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Affiliation(s)
- Luca Pancotti
- Department of Biochemistry, Microbiology and Bio-informatics, Laval University, Canada; Neuroscience Axis, CRCHUQ, Laval University, Canada
| | - Lisa Topolnik
- Department of Biochemistry, Microbiology and Bio-informatics, Laval University, Canada; Neuroscience Axis, CRCHUQ, Laval University, Canada.
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38
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Ang GWY, Tang CS, Hay YA, Zannone S, Paulsen O, Clopath C. The functional role of sequentially neuromodulated synaptic plasticity in behavioural learning. PLoS Comput Biol 2021; 17:e1009017. [PMID: 34111110 PMCID: PMC8192019 DOI: 10.1371/journal.pcbi.1009017] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2020] [Accepted: 04/28/2021] [Indexed: 11/28/2022] Open
Abstract
To survive, animals have to quickly modify their behaviour when the reward changes. The internal representations responsible for this are updated through synaptic weight changes, mediated by certain neuromodulators conveying feedback from the environment. In previous experiments, we discovered a form of hippocampal Spike-Timing-Dependent-Plasticity (STDP) that is sequentially modulated by acetylcholine and dopamine. Acetylcholine facilitates synaptic depression, while dopamine retroactively converts the depression into potentiation. When these experimental findings were implemented as a learning rule in a computational model, our simulations showed that cholinergic-facilitated depression is important for reversal learning. In the present study, we tested the model's prediction by optogenetically inactivating cholinergic neurons in mice during a hippocampus-dependent spatial learning task with changing rewards. We found that reversal learning, but not initial place learning, was impaired, verifying our computational prediction that acetylcholine-modulated plasticity promotes the unlearning of old reward locations. Further, differences in neuromodulator concentrations in the model captured mouse-by-mouse performance variability in the optogenetic experiments. Our line of work sheds light on how neuromodulators enable the learning of new contingencies.
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Affiliation(s)
- Grace Wan Yu Ang
- Department of Bioengineering, Imperial College London, South Kensington Campus, London, United Kingdom
| | - Clara S. Tang
- Department of Physiology, Development and Neuroscience, Physiological Laboratory, Cambridge, United Kingdom
| | - Y. Audrey Hay
- Department of Physiology, Development and Neuroscience, Physiological Laboratory, Cambridge, United Kingdom
| | - Sara Zannone
- Department of Bioengineering, Imperial College London, South Kensington Campus, London, United Kingdom
| | - Ole Paulsen
- Department of Physiology, Development and Neuroscience, Physiological Laboratory, Cambridge, United Kingdom
| | - Claudia Clopath
- Department of Bioengineering, Imperial College London, South Kensington Campus, London, United Kingdom
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39
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Louth EL, Jørgensen RL, Korshoej AR, Sørensen JCH, Capogna M. Dopaminergic Neuromodulation of Spike Timing Dependent Plasticity in Mature Adult Rodent and Human Cortical Neurons. Front Cell Neurosci 2021; 15:668980. [PMID: 33967700 PMCID: PMC8102156 DOI: 10.3389/fncel.2021.668980] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2021] [Accepted: 03/29/2021] [Indexed: 11/29/2022] Open
Abstract
Synapses in the cerebral cortex constantly change and this dynamic property regulated by the action of neuromodulators such as dopamine (DA), is essential for reward learning and memory. DA modulates spike-timing-dependent plasticity (STDP), a cellular model of learning and memory, in juvenile rodent cortical neurons. However, it is unknown whether this neuromodulation also occurs at excitatory synapses of cortical neurons in mature adult mice or in humans. Cortical layer V pyramidal neurons were recorded with whole cell patch clamp electrophysiology and an extracellular stimulating electrode was used to induce STDP. DA was either bath-applied or optogenetically released in slices from mice. Classical STDP induction protocols triggered non-hebbian excitatory synaptic depression in the mouse or no plasticity at human cortical synapses. DA reverted long term synaptic depression to baseline in mouse via dopamine 2 type receptors or elicited long term synaptic potentiation in human cortical synapses. Furthermore, when DA was applied during an STDP protocol it depressed presynaptic inhibition in the mouse but not in the human cortex. Thus, DA modulates excitatory synaptic plasticity differently in human vs. mouse cortex. The data strengthens the importance of DA in gating cognition in humans, and may inform on therapeutic interventions to recover brain function from diseases.
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Affiliation(s)
- Emma Louise Louth
- Department of Biomedicine, Aarhus University, Aarhus, Denmark.,DANDRITE, The Danish Research Institute of Translational Neuroscience, Aarhus University, Aarhus, Denmark
| | | | | | | | - Marco Capogna
- Department of Biomedicine, Aarhus University, Aarhus, Denmark.,DANDRITE, The Danish Research Institute of Translational Neuroscience, Aarhus University, Aarhus, Denmark.,Center for Proteins in Memory-PROMEMO, Danish National Research Foundation, Aarhus University, Aarhus, Denmark
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40
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Raman DV, O'Leary T. Frozen algorithms: how the brain's wiring facilitates learning. Curr Opin Neurobiol 2021; 67:207-214. [PMID: 33508698 PMCID: PMC8202511 DOI: 10.1016/j.conb.2020.12.017] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Revised: 12/21/2020] [Accepted: 12/30/2020] [Indexed: 12/03/2022]
Abstract
Synapses and neural connectivity are plastic and shaped by experience. But to what extent does connectivity itself influence the ability of a neural circuit to learn? Insights from optimization theory and AI shed light on how learning can be implemented in neural circuits. Though abstract in their nature, learning algorithms provide a principled set of hypotheses on the necessary ingredients for learning in neural circuits. These include the kinds of signals and circuit motifs that enable learning from experience, as well as an appreciation of the constraints that make learning challenging in a biological setting. Remarkably, some simple connectivity patterns can boost the efficiency of relatively crude learning rules, showing how the brain can use anatomy to compensate for the biological constraints of known synaptic plasticity mechanisms. Modern connectomics provides rich data for exploring this principle, and may reveal how brain connectivity is constrained by the requirement to learn efficiently.
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Affiliation(s)
- Dhruva V Raman
- Department of Engineering, University of Cambridge, United Kingdom
| | - Timothy O'Leary
- Department of Engineering, University of Cambridge, United Kingdom.
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41
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Cone I, Shouval HZ. Learning precise spatiotemporal sequences via biophysically realistic learning rules in a modular, spiking network. eLife 2021; 10:e63751. [PMID: 33734085 PMCID: PMC7972481 DOI: 10.7554/elife.63751] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 02/16/2021] [Indexed: 11/13/2022] Open
Abstract
Multiple brain regions are able to learn and express temporal sequences, and this functionality is an essential component of learning and memory. We propose a substrate for such representations via a network model that learns and recalls discrete sequences of variable order and duration. The model consists of a network of spiking neurons placed in a modular microcolumn based architecture. Learning is performed via a biophysically realistic learning rule that depends on synaptic 'eligibility traces'. Before training, the network contains no memory of any particular sequence. After training, presentation of only the first element in that sequence is sufficient for the network to recall an entire learned representation of the sequence. An extended version of the model also demonstrates the ability to successfully learn and recall non-Markovian sequences. This model provides a possible framework for biologically plausible sequence learning and memory, in agreement with recent experimental results.
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Affiliation(s)
- Ian Cone
- Neurobiology and Anatomy, University of Texas Medical School at HoustonHouston, TXUnited States
- Applied Physics, Rice UniversityHouston, TXUnited States
| | - Harel Z Shouval
- Neurobiology and Anatomy, University of Texas Medical School at HoustonHouston, TXUnited States
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42
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Abstract
The hippocampus is crucial for spatial learning but their neuronal mechanisms remain unknown. Here, we found that hippocampal cell ensembles preferentially replayed salient reward-related locations as rats learned a new behavioral trajectory for reward. The contents of these hippocampal replays progressively varied with learning. Especially during learning, hippocampal neurons even replayed an optimized path that had never been exploited by the animals. The learning-related hippocampal activity was necessary for the stabilization of spatial behavior. These results suggest prioritized replays of significant experiences on a predictive map by hippocampal neurons. Hippocampal cells are central to spatial and predictive representations, and experience replays by place cells are crucial for learning and memory. Nonetheless, how hippocampal replay patterns dynamically change during the learning process remains to be elucidated. Here, we designed a spatial task in which rats learned a new behavioral trajectory for reward. We found that as rats updated their behavioral strategies for a novel salient location, hippocampal cell ensembles increased theta-sequences and sharp wave ripple-associated synchronous spikes that preferentially replayed salient locations and reward-related contexts in reverse order. The directionality and contents of the replays progressively varied with learning, including an optimized path that had never been exploited by the animals, suggesting prioritized replays of significant experiences on a predictive map. Online feedback blockade of sharp wave ripples during a learning process inhibited stabilizing optimized behavior. These results implicate learning-associated experience replays that act to learn and reinforce specific behavioral strategies.
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Fuenzalida M, Chiu CQ, Chávez AE. Muscarinic Regulation of Spike Timing Dependent Synaptic Plasticity in the Hippocampus. Neuroscience 2020; 456:50-59. [PMID: 32828940 DOI: 10.1016/j.neuroscience.2020.08.015] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2019] [Revised: 08/01/2020] [Accepted: 08/11/2020] [Indexed: 11/18/2022]
Abstract
Long-term changes in synaptic transmission between neurons in the brain are considered the cellular basis of learning and memory. Over the last few decades, many studies have revealed that the precise order and timing of activity between pre- and post-synaptic cells ("spike-timing-dependent plasticity; STDP") is crucial for the sign and magnitude of long-term changes at many central synapses. Acetylcholine (ACh) via the recruitment of diverse muscarinic receptors is known to influence STDP in a variety of ways, enabling flexibility and adaptability in brain network activity during complex behaviors. In this review, we will summarize and discuss different mechanistic aspects of muscarinic modulation of timing-dependent plasticity at both excitatory and inhibitory synapses in the hippocampus to shape learning and memory.
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Affiliation(s)
- Marco Fuenzalida
- Center of Neurobiology and Integrative Physiopathology, Institute of Physiology, Faculty of Science, Universidad de Valparaíso, Chile.
| | - Chiayu Q Chiu
- Interdisciplinary Center of Neuroscience of Valparaiso, Institute of Neuroscience, Faculty of Science, Universidad de Valparaíso, Chile
| | - Andrés E Chávez
- Interdisciplinary Center of Neuroscience of Valparaiso, Institute of Neuroscience, Faculty of Science, Universidad de Valparaíso, Chile
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44
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Dopamine agonist treatment increases sensitivity to gamble outcomes in the hippocampus in de novo Parkinson's disease. NEUROIMAGE-CLINICAL 2020; 28:102362. [PMID: 32798910 PMCID: PMC7453137 DOI: 10.1016/j.nicl.2020.102362] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2019] [Revised: 06/26/2020] [Accepted: 06/29/2020] [Indexed: 11/20/2022]
Abstract
BACKGROUND Parkinson's disease is associated with severe nigro-striatal dopamine depletion, leading to motor dysfunction and altered reward processing. We previously showed that drug-naïve patients with Parkinson's disease had a consistent attenuation of reward signalling in the mesolimbic and mesocortical system. Here, we address the neurobiological effects of dopaminergic therapy on reward sensitivity in the mesolimbic circuitry, and how this may contribute to neuropsychiatric symptoms. OBJECTIVES We tested the hypothesis that (1) dopaminergic treatment would restore the attenuated, mesolimbic and mesocortical responses to reward; and (2) restoration of reward responsivity by dopaminergic treatment would predict motor performance and the emergence of impulse control symptoms. METHODS In 11 drug-naïve Parkinson patients, we prospectively assessed treatment-induced changes in reward processing before, and eight weeks after initiation of monotherapy with dopamine agonists. They were compared to 10 non-medicated healthy controls who were also measured longitudinally. We used whole-brain functional magnetic resonance imaging at 3 Tesla to assess the reward responsivity of the brain to monetary gains and losses, while participants performed a simple consequential gambling task. RESULTS In patients, dopaminergic treatment improved clinical motor symptoms without significantly changing task performance. Dopamine agonist therapy induced a stronger reward responsivity in the right hippocampus with higher doses being less effective. None of the patients developed impulse control disorders in the follow-up period of four years. CONCLUSIONS Short-term treatment with first-ever dopaminergic medication partially restores deficient reward-related processing in the hippocampus in de novo Parkinson's disease.
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Abstract
Synaptic plasticity, the activity-dependent change in neuronal connection strength, has long been considered an important component of learning and memory. Computational and engineering work corroborate the power of learning through the directed adjustment of connection weights. Here we review the fundamental elements of four broadly categorized forms of synaptic plasticity and discuss their functional capabilities and limitations. Although standard, correlation-based, Hebbian synaptic plasticity has been the primary focus of neuroscientists for decades, it is inherently limited. Three-factor plasticity rules supplement Hebbian forms with neuromodulation and eligibility traces, while true supervised types go even further by adding objectives and instructive signals. Finally, a recently discovered hippocampal form of synaptic plasticity combines the above elements, while leaving behind the primary Hebbian requirement. We suggest that the effort to determine the neural basis of adaptive behavior could benefit from renewed experimental and theoretical investigation of more powerful directed types of synaptic plasticity.
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Affiliation(s)
- Jeffrey C Magee
- Department of Neuroscience and Howard Hughes Medical Institute, Baylor College of Medicine, Houston, Texas 77030, USA;
| | - Christine Grienberger
- Department of Neuroscience and Howard Hughes Medical Institute, Baylor College of Medicine, Houston, Texas 77030, USA;
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46
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Distinct effects of reward and navigation history on hippocampal forward and reverse replays. Proc Natl Acad Sci U S A 2019; 117:689-697. [PMID: 31871185 DOI: 10.1073/pnas.1912533117] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
To better understand the functional roles of hippocampal forward and reverse replays, we trained rats in a spatial sequence memory task and examined how these replays are modulated by reward and navigation history. We found that reward enhances both forward and reverse replays during the awake state, but in different ways. Reward enhances the rate of reverse replays, but it increases the fidelity of forward replays for recently traveled as well as other alternative trajectories heading toward a rewarding location. This suggests roles for forward and reverse replays in reinforcing representations for all potential rewarding trajectories. We also found more faithful reactivation of upcoming than already rewarded trajectories in forward replays. This suggests a role for forward replays in preferentially reinforcing representations for high-value trajectories. We propose that hippocampal forward and reverse replays might contribute to constructing a map of potential navigation trajectories and their associated values (a "value map") via distinct mechanisms.
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47
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Lehmann MP, Xu HA, Liakoni V, Herzog MH, Gerstner W, Preuschoff K. One-shot learning and behavioral eligibility traces in sequential decision making. eLife 2019; 8:e47463. [PMID: 31709980 PMCID: PMC6897511 DOI: 10.7554/elife.47463] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2019] [Accepted: 11/01/2019] [Indexed: 11/13/2022] Open
Abstract
In many daily tasks, we make multiple decisions before reaching a goal. In order to learn such sequences of decisions, a mechanism to link earlier actions to later reward is necessary. Reinforcement learning (RL) theory suggests two classes of algorithms solving this credit assignment problem: In classic temporal-difference learning, earlier actions receive reward information only after multiple repetitions of the task, whereas models with eligibility traces reinforce entire sequences of actions from a single experience (one-shot). Here, we show one-shot learning of sequences. We developed a novel paradigm to directly observe which actions and states along a multi-step sequence are reinforced after a single reward. By focusing our analysis on those states for which RL with and without eligibility trace make qualitatively distinct predictions, we find direct behavioral (choice probability) and physiological (pupil dilation) signatures of reinforcement learning with eligibility trace across multiple sensory modalities.
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Affiliation(s)
- Marco P Lehmann
- Brain-Mind-Institute, School of Life SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
- School of Computer and Communication SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
| | - He A Xu
- Laboratory of Psychophysics, School of Life SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
| | - Vasiliki Liakoni
- Brain-Mind-Institute, School of Life SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
- School of Computer and Communication SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
| | - Michael H Herzog
- Laboratory of Psychophysics, School of Life SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
| | - Wulfram Gerstner
- Brain-Mind-Institute, School of Life SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
- School of Computer and Communication SciencesÉcole Polytechnique Fédérale de LausanneLausanneSwitzerland
| | - Kerstin Preuschoff
- Swiss Center for Affective Sciences, University of GenevaGenevaSwitzerland
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48
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Brzosko Z, Mierau SB, Paulsen O. Neuromodulation of Spike-Timing-Dependent Plasticity: Past, Present, and Future. Neuron 2019; 103:563-581. [DOI: 10.1016/j.neuron.2019.05.041] [Citation(s) in RCA: 91] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Revised: 05/20/2019] [Accepted: 05/24/2019] [Indexed: 12/31/2022]
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49
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Hamel R, Côté K, Matte A, Lepage JF, Bernier PM. Rewards interact with repetition-dependent learning to enhance long-term retention of motor memories. Ann N Y Acad Sci 2019; 1452:34-51. [PMID: 31294872 DOI: 10.1111/nyas.14171] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2019] [Revised: 04/26/2019] [Accepted: 05/29/2019] [Indexed: 11/28/2022]
Abstract
The combination of behavioral experiences that enhance long-term retention remains largely unknown. Informed by neurophysiological lines of work, this study tested the hypothesis that performance-contingent monetary rewards potentiate repetition-dependent forms of learning, as induced by extensive practice at asymptote, to enhance long-term retention of motor memories. To this end, six groups of 14 participants (n = 84) acquired novel motor behaviors by adapting to a gradual visuomotor rotation while these factors were manipulated. Retention was assessed 24 h later. While all groups similarly acquired the novel motor behaviors, results from the retention session revealed an interaction indicating that rewards enhanced long-term retention, but only when practice was extended to asymptote. Specifically, the interaction indicated that this effect selectively occurred when rewards were intermittently available (i.e., 50%), but not when they were absent (i.e., 0%) or continuously available (i.e., 100%) during acquisition. This suggests that the influence of rewards on extensive practice and long-term retention is nonlinear, as continuous rewards did not further enhance retention as compared with intermittent rewards. One possibility is that rewards' intermittent availability allows to maintain their subjective value during acquisition, which may be key to potentiate long-term retention.
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Affiliation(s)
- Raphaël Hamel
- Département de Pédiatrie, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, Sherbrooke, Québec, Canada.,Département de Kinanthropologie, Faculté des Sciences de l'Activité Physique, Université de Sherbrooke, Sherbrooke, Québec, Canada
| | - Kathleen Côté
- Département de Pédiatrie, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, Sherbrooke, Québec, Canada
| | - Alexia Matte
- Département de Pédiatrie, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, Sherbrooke, Québec, Canada
| | - Jean-François Lepage
- Département de Pédiatrie, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, Sherbrooke, Québec, Canada
| | - Pierre-Michel Bernier
- Département de Kinanthropologie, Faculté des Sciences de l'Activité Physique, Université de Sherbrooke, Sherbrooke, Québec, Canada
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50
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Mozafari M, Ganjtabesh M, Nowzari-Dalini A, Masquelier T. SpykeTorch: Efficient Simulation of Convolutional Spiking Neural Networks With at Most One Spike per Neuron. Front Neurosci 2019; 13:625. [PMID: 31354403 PMCID: PMC6640212 DOI: 10.3389/fnins.2019.00625] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Accepted: 05/31/2019] [Indexed: 11/13/2022] Open
Abstract
Application of deep convolutional spiking neural networks (SNNs) to artificial intelligence (AI) tasks has recently gained a lot of interest since SNNs are hardware-friendly and energy-efficient. Unlike the non-spiking counterparts, most of the existing SNN simulation frameworks are not practically efficient enough for large-scale AI tasks. In this paper, we introduce SpykeTorch, an open-source high-speed simulation framework based on PyTorch. This framework simulates convolutional SNNs with at most one spike per neuron and the rank-order encoding scheme. In terms of learning rules, both spike-timing-dependent plasticity (STDP) and reward-modulated STDP (R-STDP) are implemented, but other rules could be implemented easily. Apart from the aforementioned properties, SpykeTorch is highly generic and capable of reproducing the results of various studies. Computations in the proposed framework are tensor-based and totally done by PyTorch functions, which in turn brings the ability of just-in-time optimization for running on CPUs, GPUs, or Multi-GPU platforms.
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Affiliation(s)
- Milad Mozafari
- Department of Computer Science, School of Mathematics, Statistics, and Computer Science, University of Tehran, Tehran, Iran.,CERCO UMR 5549, CNRS - Université Toulouse 3, Toulouse, France
| | - Mohammad Ganjtabesh
- Department of Computer Science, School of Mathematics, Statistics, and Computer Science, University of Tehran, Tehran, Iran
| | - Abbas Nowzari-Dalini
- Department of Computer Science, School of Mathematics, Statistics, and Computer Science, University of Tehran, Tehran, Iran
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