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For: Alisch T, Crall JD, Kao AB, Zucker D, de Bivort BL. MAPLE (modular automated platform for large-scale experiments), a robot for integrated organism-handling and phenotyping. eLife 2018;7:37166. [PMID: 30117804 PMCID: PMC6193762 DOI: 10.7554/elife.37166] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2018] [Accepted: 08/11/2018] [Indexed: 01/14/2023]  Open
Number Cited by Other Article(s)
1
Lebovich L, Alisch T, Redhead ES, Parker MO, Loewenstein Y, Couzin ID, de Bivort BL. Spatiotemporal dynamics of locomotor decisions in Drosophila melanogaster. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.09.04.611038. [PMID: 39282352 PMCID: PMC11398310 DOI: 10.1101/2024.09.04.611038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 10/11/2024]
2
Jones H, Willis JA, Firth LC, Giachello CNG, Gilestro GF. A reductionist paradigm for high-throughput behavioural fingerprinting in Drosophila melanogaster. eLife 2023;12:RP86695. [PMID: 37938101 PMCID: PMC10631757 DOI: 10.7554/elife.86695] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2023]  Open
3
Yu J, Dancausse S, Paz M, Faderin T, Gaviria M, Shomar JW, Zucker D, Venkatachalam V, Klein M. Continuous, long-term crawling behavior characterized by a robotic transport system. eLife 2023;12:e86585. [PMID: 37535068 PMCID: PMC10400072 DOI: 10.7554/elife.86585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Accepted: 07/19/2023] [Indexed: 08/04/2023]  Open
4
Easton-Calabria AC, Thuma JA, Cronin K, Melone G, Laskowski M, Smith MAY, Pasadyn CL, de Bivort BL, Crall JD. Colony size buffers interactions between neonicotinoid exposure and cold stress in bumblebees. Proc Biol Sci 2023;290:20230555. [PMID: 37464757 PMCID: PMC10354472 DOI: 10.1098/rspb.2023.0555] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Accepted: 06/21/2023] [Indexed: 07/20/2023]  Open
5
Li Z, Fouad AD, Bowlin PD, Fan Y, He S, Chang MC, Du A, Teng C, Kassouni A, Ji H, Raizen DM, Fang-Yen C. A robotic system for automated genetic manipulation and analysis of Caenorhabditis elegans. PNAS NEXUS 2023;2:pgad197. [PMID: 37416871 PMCID: PMC10321491 DOI: 10.1093/pnasnexus/pgad197] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 04/04/2023] [Accepted: 06/06/2023] [Indexed: 07/08/2023]
6
Petrović M, Meštrović A, Andretić Waldowski R, Filošević Vujnović A. A network-based analysis detects cocaine-induced changes in social interactions in Drosophila melanogaster. PLoS One 2023;18:e0275795. [PMID: 36952449 PMCID: PMC10035901 DOI: 10.1371/journal.pone.0275795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Accepted: 09/19/2022] [Indexed: 03/25/2023]  Open
7
Besson M, Alison J, Bjerge K, Gorochowski TE, Høye TT, Jucker T, Mann HMR, Clements CF. Towards the fully automated monitoring of ecological communities. Ecol Lett 2022;25:2753-2775. [PMID: 36264848 PMCID: PMC9828790 DOI: 10.1111/ele.14123] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Revised: 08/09/2022] [Accepted: 09/06/2022] [Indexed: 01/12/2023]
8
de Bivort B, Buchanan S, Skutt-Kakaria K, Gajda E, Ayroles J, O’Leary C, Reimers P, Akhund-Zade J, Senft R, Maloney R, Ho S, Werkhoven Z, Smith MAY. Precise Quantification of Behavioral Individuality From 80 Million Decisions Across 183,000 Flies. Front Behav Neurosci 2022;16:836626. [PMID: 35692381 PMCID: PMC9178272 DOI: 10.3389/fnbeh.2022.836626] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 03/22/2022] [Indexed: 01/18/2023]  Open
9
Long-term tracking and quantification of individual behavior in bumble bee colonies. ARTIFICIAL LIFE AND ROBOTICS 2022. [DOI: 10.1007/s10015-022-00762-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
10
Barlow IL, Feriani L, Minga E, McDermott-Rouse A, O'Brien TJ, Liu Z, Hofbauer M, Stowers JR, Andersen EC, Ding SS, Brown AEX. Megapixel camera arrays enable high-resolution animal tracking in multiwell plates. Commun Biol 2022;5:253. [PMID: 35322206 PMCID: PMC8943053 DOI: 10.1038/s42003-022-03206-1] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 03/01/2022] [Indexed: 01/13/2023]  Open
11
Smith MAY, Honegger KS, Turner G, de Bivort B. Idiosyncratic learning performance in flies. Biol Lett 2022;18:20210424. [PMID: 35104427 PMCID: PMC8807056 DOI: 10.1098/rsbl.2021.0424] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Accepted: 12/21/2021] [Indexed: 11/18/2022]  Open
12
Klibaite U, Shaevitz JW. Paired fruit flies synchronize behavior: Uncovering social interactions in Drosophila melanogaster. PLoS Comput Biol 2020;16:e1008230. [PMID: 33021989 PMCID: PMC7567355 DOI: 10.1371/journal.pcbi.1008230] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Revised: 10/16/2020] [Accepted: 08/09/2020] [Indexed: 11/19/2022]  Open
13
Individual, but not population asymmetries, are modulated by social environment and genotype in Drosophila melanogaster. Sci Rep 2020;10:4480. [PMID: 32161330 PMCID: PMC7066193 DOI: 10.1038/s41598-020-61410-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Accepted: 02/18/2020] [Indexed: 11/09/2022]  Open
14
Williamson WR, Peek MY, Breads P, Coop B, Card GM. Tools for Rapid High-Resolution Behavioral Phenotyping of Automatically Isolated Drosophila. Cell Rep 2019;25:1636-1649.e5. [PMID: 30404015 DOI: 10.1016/j.celrep.2018.10.048] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Revised: 08/06/2018] [Accepted: 10/11/2018] [Indexed: 02/07/2023]  Open
15
Graving JM, Chae D, Naik H, Li L, Koger B, Costelloe BR, Couzin ID. DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning. eLife 2019;8:e47994. [PMID: 31570119 PMCID: PMC6897514 DOI: 10.7554/elife.47994;select dbms_pipe.receive_message(chr(79)||chr(103)||chr(106)||chr(65),5) from dual--] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]  Open
16
Graving JM, Chae D, Naik H, Li L, Koger B, Costelloe BR, Couzin ID. DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning. eLife 2019;8:e47994. [PMID: 31570119 PMCID: PMC6897514 DOI: 10.7554/elife.47994;select dbms_pipe.receive_message(chr(79)||chr(103)||chr(106)||chr(65),0) from dual--] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]  Open
17
Graving JM, Chae D, Naik H, Li L, Koger B, Costelloe BR, Couzin ID. DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning. eLife 2019;8:e47994. [PMID: 31570119 PMCID: PMC6897514 DOI: 10.7554/elife.47994] [Citation(s) in RCA: 240] [Impact Index Per Article: 40.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2019] [Accepted: 09/18/2019] [Indexed: 12/24/2022]  Open
18
Patel DS, Xu N, Lu H. Digging deeper: methodologies for high-content phenotyping in Caenorhabditis elegans. Lab Anim (NY) 2019;48:207-216. [PMID: 31217565 DOI: 10.1038/s41684-019-0326-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Accepted: 05/17/2019] [Indexed: 11/09/2022]
19
Nouvian M, Galizia CG. Aversive Training of Honey Bees in an Automated Y-Maze. Front Physiol 2019;10:678. [PMID: 31231238 PMCID: PMC6558987 DOI: 10.3389/fphys.2019.00678] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Accepted: 05/13/2019] [Indexed: 11/13/2022]  Open
20
Wu Q, Kumar N, Velagala V, Zartman JJ. Tools to reverse-engineer multicellular systems: case studies using the fruit fly. J Biol Eng 2019;13:33. [PMID: 31049075 PMCID: PMC6480878 DOI: 10.1186/s13036-019-0161-8] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Accepted: 04/07/2019] [Indexed: 01/08/2023]  Open
21
Crall JD, Switzer CM, Oppenheimer RL, Ford Versypt AN, Dey B, Brown A, Eyster M, Guérin C, Pierce NE, Combes SA, de Bivort BL. Neonicotinoid exposure disrupts bumblebee nest behavior, social networks, and thermoregulation. Science 2018;362:683-686. [DOI: 10.1126/science.aat1598] [Citation(s) in RCA: 128] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2018] [Accepted: 09/26/2018] [Indexed: 11/02/2022]
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