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Oberemok VV, Puzanova YV, Gal’chinsky NV. The 'genetic zipper' method offers a cost-effective solution for aphid control. FRONTIERS IN INSECT SCIENCE 2024; 4:1467221. [PMID: 39726916 PMCID: PMC11670321 DOI: 10.3389/finsc.2024.1467221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2024] [Accepted: 11/11/2024] [Indexed: 12/28/2024]
Abstract
Twenty years ago, it was difficult to imagine the use of nucleic acids in plant protection as insecticides, but today it is a reality. New technologies often work inefficiently and are very expensive; however, qualitative changes occur during their development, making them more accessible and work effectively. Invented in 2008, contact oligonucleotide insecticides (olinscides, or DNA insecticides) based on the CUAD (contact unmodified antisense DNA) platform have been substantially improved and rethought. The main paradigm shift was demonstrating that unmodified antisense DNA can act as a contact insecticide. Key breakthroughs included identifying convenient target genes (rRNA genes), mechanism of action (DNA containment), and discovering insect pests (sternorrhynchans) with high susceptibility to olinscides. Today, the CUAD platform possesses impressive characteristics: low carbon footprint, high safety for non-target organisms, rapid biodegradability, and avoidance of target-site resistance. This next-generation class of insecticides creates opportunities for developing products tailored for specific insect pest populations. The 'genetic zipper' method, based on CUAD biotechnology, integrates molecular genetics, bioinformatics, and in vitro nucleic acid synthesis. It serves as a simple and flexible tool for DNA-programmable plant protection using unmodified antisense oligonucleotides targeting pest rRNAs. Aphids, key pests of important agricultural crops, can be effectively controlled by oligonucleotide insecticides at an affordable price, ensuring efficient control with minimal environmental risks. In this article, a low-dose concentration (0.1 ng/µL; 20 mg per hectare in 200 L of water) of the 11 nt long oligonucleotide insecticide Schip-11 shows effectiveness against the aphid Schizolachnus pineti, causing mortality rate of 76.06 ± 7.68 on the 12th day (p<0.05). At a consumption rate of 200 L per hectare, the cost of the required oligonucleotide insecticide is about 0.5 USD/ha using liquid-phase DNA synthesis making them competitive in the market and very affordable for lab investigations. We also show that non-canonical base pairing Golinscide: UrRNA is well tolerated in aphids. Thus, non-canonical base-pairing should be considered not to harm non-target organisms and can be easily solved during the design of oligonucleotide insecticides. The 'genetic zipper' method, based on CUAD biotechnology, helps quickly create a plethora of efficient oligonucleotide pesticides against aphids and other pests. Already today, according to our estimations, the 'genetic zipper' is potentially capable of effectively controlling 10-15% of all insect pests using a simple and flexible algorithm.
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Affiliation(s)
- Vol V. Oberemok
- Department of General Biology and Genetics, Institute of Biochemical Technologies, Ecology and Pharmacy, V.I. Vernadsky Crimean Federal University, Simferopol, Republic of Crimea
- Laboratory of Entomology and Phytopathology, Dendrology and Landscape Architecture, Nikita Botanical Gardens—National Scientific Centre of the Russian Academy of Sciences, Yalta, Republic of Crimea
| | - Yelizaveta V. Puzanova
- Department of General Biology and Genetics, Institute of Biochemical Technologies, Ecology and Pharmacy, V.I. Vernadsky Crimean Federal University, Simferopol, Republic of Crimea
| | - Nikita V. Gal’chinsky
- Department of General Biology and Genetics, Institute of Biochemical Technologies, Ecology and Pharmacy, V.I. Vernadsky Crimean Federal University, Simferopol, Republic of Crimea
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Mahieu L, González-González A, Rubio-Meléndez ME, Moya-Hernández M, Francis F, Ramírez CC. An Aphid Pest Superclone Benefits From a Facultative Bacterial Endosymbiont in a Host-Dependent Manner, Leading to Reproductive and Proteomic Changes. ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY 2024; 117:e22154. [PMID: 39397367 DOI: 10.1002/arch.22154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2024] [Revised: 09/05/2024] [Accepted: 09/21/2024] [Indexed: 10/15/2024]
Abstract
The English grain aphid, Sitobion avenae, is a significant agricultural pest affecting wheat, barley, and oats. In Chile, the most prevalent and persistent clone (superclone) of S. avenae harbors the facultative endosymbiont bacterium Regiella insecticola. To determine the role of this bacterium in the reproductive success of this superclone, the presence of R. insecticola was manipulated to assess its impact on (1) the reproductive performance of this clone on two host plant species (wheat and barley), (2) the production of winged morphs, (3) changes in the insects' proteomic profiles, and (4) the root/shoot ratio of plant. It was found that the reproductive performance of this S. avenae superclone varied across host plants, depending on the presence of the facultative bacterial endosymbiont. Aphids infected with R. insecticola showed higher reproductive success on wheat, while the opposite effect was observed on barley. Aphid biomass was greater when infected with R. insecticola, particularly on barley. Additionally, aphids harboring R. insecticola exhibited a higher proportion of winged individuals on both host plants. Protein regulation in aphids on wheat was lower compared to those on barley. A higher root/shoot biomass ratio was observed in wheat plants compared to barley when infested by R. insecticola-infected aphid. Thus, R. insecticola significantly influences the reproductive performance and proteomic profile of a S. avenae superclone, with these effects shaped by the host plant. This suggests that the interaction between the host plant and the facultative endosymbiont contributes to the ecological success of this superclone.
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Affiliation(s)
- Leandro Mahieu
- Gembloux Agro-Bio Tech-Université de Liège, Gembloux, Belgium
| | - Angélica González-González
- Centre for Molecular and Functional Ecology, Instituto de Ciencias Biológicas, Universidad de Talca, Talca, Chile
| | - María Eugenia Rubio-Meléndez
- Centro de Bioinformática y Simulación Molecular, Facultad de Ingeniería, Universidad de Talca, Talca, Maule, Chile
| | - Mario Moya-Hernández
- Centre for Molecular and Functional Ecology, Instituto de Ciencias Biológicas, Universidad de Talca, Talca, Chile
| | | | - Claudio C Ramírez
- Centre for Molecular and Functional Ecology, Instituto de Ciencias Biológicas, Universidad de Talca, Talca, Chile
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Martel SI, Zamora CA, Ricote N, Sepúlveda DA, Mahéo F, Simon JC, Figueroa CC, Rezende EL, Bozinovic F. Rapid turnover of a pea aphid superclone mediated by thermal endurance in central Chile. Proc Biol Sci 2024; 291:20232462. [PMID: 38320609 PMCID: PMC10846945 DOI: 10.1098/rspb.2023.2462] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 01/02/2024] [Indexed: 02/08/2024] Open
Abstract
Global change drivers are imposing novel conditions on Earth's ecosystems at an unprecedented rate. Among them, biological invasions and climate change are of critical concern. It is generally thought that strictly asexual populations will be more susceptible to rapid environmental alterations due to their lack of genetic variability and, thus, of adaptive responses. In this study, we evaluated the persistence of a widely distributed asexual lineage of the alfalfa race of the pea aphid, Acyrthosiphon pisum, along a latitudinal transect of approximately 600 km in central Chile after facing environmental change for a decade. Based on microsatellite markers, we found an almost total replacement of the original aphid superclone by a new variant. Considering the unprecedented warming that this region has experienced in recent years, we experimentally evaluated the reproductive performance of these two A. pisum lineages at different thermal regimes. The new variant exhibits higher rates of population increase at warmer temperatures, and computer simulations employing a representative temperature dataset suggest that it might competitively displace the original superclone. These results support the idea of a superclone turnover mediated by differential reproductive performance under changing temperatures.
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Affiliation(s)
- Sebastián I. Martel
- Departamento de Ecología, Center of Applied Ecology and Sustainability (CAPES), Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile
- Departamento de Ciencias, Facultad de Artes Liberales, Universidad Adolfo Ibáñez, Santiago & Viña del Mar, Chile
- Instituto Milenio en Socio-Ecología Costera (SECOS), Santiago de Chile, Chile
| | - Cristián A. Zamora
- Departamento de Ecología, Center of Applied Ecology and Sustainability (CAPES), Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile
| | - Natalia Ricote
- Departamento de Ciencias, Facultad de Artes Liberales, Universidad Adolfo Ibáñez, Santiago & Viña del Mar, Chile
| | - Daniela A. Sepúlveda
- Center for Molecular and Functional Ecology in Agroecosystems (CEMF), Instituto de Ciencias Biológicas, Universidad de Talca, Av. Lircay s/n, Talca, Chile
| | - Frédérique Mahéo
- INRAE, UMR IGEPP, Institut Agro, Université de Rennes, Le Rheu, France
| | | | - Christian C. Figueroa
- Center for Molecular and Functional Ecology in Agroecosystems (CEMF), Instituto de Ciencias Biológicas, Universidad de Talca, Av. Lircay s/n, Talca, Chile
| | - Enrico L. Rezende
- Departamento de Ecología, Center of Applied Ecology and Sustainability (CAPES), Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile
| | - Francisco Bozinovic
- Departamento de Ecología, Center of Applied Ecology and Sustainability (CAPES), Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago de Chile, Chile
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Jing K, Li M, Zhao H, Guo J, Yang N, Yang M, Xian X, Liu W. Estimating the Global Geographical Distribution Patterns of the Invasive Crop Pest Diuraphis noxia Kurdjumov under Current and Future Climatic Scenarios. INSECTS 2023; 14:insects14050425. [PMID: 37233053 DOI: 10.3390/insects14050425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Revised: 04/21/2023] [Accepted: 04/27/2023] [Indexed: 05/27/2023]
Abstract
Invasive crop pests (ICPs) are a major cause of crop losses and adversely affect global food security. Diuraphis noxia Kurdjumov is a significant ICP that feeds on the sap of crops, reducing crop yield and quality. Although estimating the geographical distribution patterns of D. noxia under climate change is critical for its management and global food security, such information remains unclear. Based on 533 global occurrence records and 9 bioclimatic variables, an optimized MaxEnt model was used to predict the potential global geographical distribution of D. noxia. The results showed that Bio1, Bio2, Bio7, and Bio12 were significant bioclimatic variables that influenced the potential geographical distribution of D. noxia. Under current climatic conditions, D. noxia was mainly distributed in west-central Asia, most of Europe, central North America, southern South America, southern and northern Africa, and southern Oceania. Under the SSP 1-2.6, SSP 2-4.5, and SSP 5-8.5 scenarios for the 2030s and 2050s, the potential suitable areas increased, and the centroid migrated to higher latitudes. The early warning of D. noxia in northwestern Asia, western Europe, and North America should be attended to further. Our results provide a theoretical basis for early monitoring and warning of D. noxia worldwide.
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Affiliation(s)
- Kaiting Jing
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Ming Li
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Haoxiang Zhao
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Jianyang Guo
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Nianwan Yang
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
- Western Agricultural Research Center, Chinese Academy of Agricultural Sciences, Changji 831100, China
| | - Ming Yang
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Xiaoqing Xian
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Wanxue Liu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
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Composition and structure of winter aphid–parasitoid food webs along a latitudinal gradient in Chile. Oecologia 2022; 200:425-440. [DOI: 10.1007/s00442-022-05270-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Accepted: 09/27/2022] [Indexed: 10/31/2022]
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Martel SI, Ossa CG, Simon J, Figueroa CC, Bozinovic F. Latitudinal trend in the reproductive mode of the pea aphid Acyrthosiphon pisum invading a wide climatic range. Ecol Evol 2020; 10:8289-8298. [PMID: 32788979 PMCID: PMC7417215 DOI: 10.1002/ece3.6536] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Revised: 05/15/2020] [Accepted: 06/08/2020] [Indexed: 11/12/2022] Open
Abstract
The maintenance of sexuality is a puzzling phenomenon in evolutionary biology. Many universal hypotheses have been proposed to explain the prevalence of sex despite its costs, but it has been hypothesized that sex could be also retained by lineage-specific mechanisms that would confer some short-term advantage. Aphids are good models to study the maintenance of sex because they exhibit coexistence of both sexual and asexual populations within the same species and because they invade a large variety of ecosystems. Sex in aphids is thought to be maintained because only sexually produced eggs can persist in cold climates, but whether sex is obligate or facultative depending on climatic conditions remains to be elucidated. In this study, we have inferred the reproductive mode of introduced populations of the pea aphid Acyrthosiphon pisum in Chile along a climatic gradient using phenotypic assays and genetic-based criteria to test the ecological short-term advantage of sex in cold environments. Our results showed a latitudinal trend in the reproductive mode of Chilean pea aphid population from obligate parthenogenesis in the north to an intermediate life cycle producing both parthenogenetic and sexual progeny in the southernmost locality, where harsh winters are usual. These findings are congruent with the hypothesis of the ecological short-term advantage of sex in aphids.
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Affiliation(s)
- Sebastián I. Martel
- Departamento de EcologíaFacultad de Ciencias BiológicasCenter of Applied Ecology and Sustainability (CAPES)Pontificia Universidad Católica de ChileSantiago de ChileChile
| | - Carmen G. Ossa
- Instituto de BiologíaFacultad de CienciasUniversidad de ValparaísoValparaísoChile
| | | | - Christian C. Figueroa
- Instituto de Ciencias BiológicasCenter for Molecular and Functional Ecology in Agroecosystems (CEMF)Universidad de TalcaTalcaChile
| | - Francisco Bozinovic
- Departamento de EcologíaFacultad de Ciencias BiológicasCenter of Applied Ecology and Sustainability (CAPES)Pontificia Universidad Católica de ChileSantiago de ChileChile
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