Study on the bio-methane yield and microbial community structure in enzyme enhanced anaerobic co-digestion of cow manure and corn straw

Dominant factors analyses and challenges of anaerobic digestion under cold environments

With the development of fermentation technology and the improvement of efficiency, anaerobic digestion (AD) has been playing an increasingly primary role in waste treatment and resource recovery. Temperature is undoubtedly the most important factor because it shapes microbial habitats, changes the composition of the microbial community structure, and even affects the expression of related functional genes. More than half of the biosphere is in a long-term or seasonal low-temperature environment (<20 °C), which makes psychrophilic AD have broad application prospects. Therefore, this review discusses the influencing factors and enhancement strategies of psychrophilic AD, which may provide a corresponding reference for future research on low-temperature fermentation. First, the occurrence of AD has been discussed. Then, the adaptation of microorganisms to the low-temperature environment was analyzed. Moreover, the challenges of psychrophilic AD have been reviewed. Meanwhile, the strategies for improving psychrophilic AD are presented. Further, from technology to application, the current situation of psychrophilic AD in pilot-scale tests is described. Finally, the economic and environmental feasibility of psychrophilic AD has been highlighted. In summary, psychrophilic AD is technically feasible, while economic analysis shows that the output benefits cannot fully cover the input costs, and the large-scale practical application of psychrophilic AD is still in its infancy. More research should focus on how to improve fermentation efficiency and reduce the investment cost of psychrophilic AD.

Quantitative assessment of exposure to fecal contamination in urban environment across nine cities in low-income and lower-middle-income countries and a city in the United States

BACKGROUND

During 2014 to 2019, the SaniPath Exposure Assessment Tool, a standardized set of methods to evaluate risk of exposure to fecal contamination in the urban environment through multiple exposure pathways, was deployed in 45 neighborhoods in ten cities, including Accra and Kumasi, Ghana; Vellore, India; Maputo, Mozambique; Siem Reap, Cambodia; Atlanta, United States; Dhaka, Bangladesh; Lusaka, Zambia; Kampala, Uganda; Dakar, Senegal.

OBJECTIVE

Assess and compare risk of exposure to fecal contamination via multiple pathways in ten cities.

METHODS

In total, 4053 environmental samples, 4586 household surveys, 128 community surveys, and 124 school surveys were collected. E. coli concentrations were measured in environmental samples as an indicator of fecal contamination magnitude. Bayesian methods were used to estimate the distributions of fecal contamination concentration and contact frequency. Exposure to fecal contamination was estimated by the Monte Carlo method. The contamination levels of ten environmental compartments, frequency of contact with those compartments for adults and children, and estimated exposure to fecal contamination through any of the surveyed environmental pathways were compared across cities and neighborhoods.

RESULTS

Distribution of fecal contamination in the environment and human contact behavior varied by city. Universally, food pathways were the most common dominant route of exposure to fecal contamination across cities in low-income and lower-middle-income countries. Risks of fecal exposure via water pathways, such as open drains, flood water, and municipal drinking water, were site-specific and often limited to smaller geographic areas (i.e., neighborhoods) instead of larger areas (i.e., cities).

CONCLUSIONS

Knowledge of the relative contribution to fecal exposure from multiple pathways, and the environmental contamination level and frequency of contact for those "dominant pathways" could provide guidance for Water, Sanitation, and Hygiene (WASH) programming and investments and enable local governments and municipalities to improve intervention strategies to reduce the risk of exposure to fecal contamination.

Strategies to boost anaerobic digestion performance of cow manure: Laboratory achievements and their full-scale application potential

Cow manure represents a surplus manure waste in agricultural food sectors, which requires proper disposal. Anaerobic digestion, in this regard, has raised global interest owing to its apparent environmental benefits, including simultaneous waste diminishment and renewable energy generation. However, dedicated intensifications are necessary to promote the degradation of recalcitrant lignocellulosic components of cow manure. Hence, this manuscript presents a review of how to exploit cow manure in anaerobic digestion through different incentives extensively at lab-scale and full-scale. These strategies comprise 1) co-digestion; 2) pretreatment; 3) introduction of additives (trace metals, carbon-based materials, low-cost composites, nanomaterials, and microbial cultures); 4) innovative systems (bio-electrochemical fields and laser irradiation). Results imply that co-digestion and pretreatment approaches gain the predominance on promoting the digestion performance of cow manure. Particularly, for the co-digestion scenario, the selection of lignin-poor co-substrate is highlighted to produce maximum synergy and pronounced removal of lignocellulosic compounds of cow manure. Mechanical, thermal, and biological (composting) pretreatments generate mild improvement at laboratory-scale and are proved applicable in full-scale facilities. It is noteworthy that the introduction of additives (Fe-based nanomaterials, carbon-based materials, and composites) is acquiring more attention and shows promising full-scale application potential. Finally, bio-electrochemical fields stand out in laboratory trials and may serve as future reactor modules in agricultural anaerobic digestion installations treating cow manure.

Influence of zinc oxide nanoparticles on anaerobic digestion of waste activated sludge and microbial communities

The influence of long-term exposure of zinc oxide nanoparticles (ZnO NPs) to waste activated sludge on anaerobic digestion and microbial communities was studied. The exposure concentrations were 0, 30, 60, 90, 120, and 150 mg g-1-volatile suspended solids (VSS) (dry). ZnO NPs inhibit the degradation of macromolecular organic matter and the reduction of VSS in waste activated sludge during anaerobic digestion. Only slight effects on the activities of protease, cellulase, acetated kinase, and coenzyme F420 were found at ZnO-NP concentrations of less than 30 mg g-1-VSS, whereas the activities of these three enzymes were adversely affected in a dose-dependent manner when the ZnO NP concentrations were increased from 30 mg g-1-VSS to 150 mg g-1-VSS. High-throughput sequencing analysis revealed that ZnO NPs had an adverse influence on the archaeal community diversity but increased the bacterial community diversity to some extent. High-throughput sequencing analysis also revealed that ZnO NPs resulted in different shift trends in the archaeal and bacteria community structure at phylum, class, and genus levels. ZnO NPs have negative impacts on the Euryarchaeota community, which plays a significant role as methanogens in the anaerobic digestion. In addition, ZnO NPs could increase the relative abundance of Clostridia and Bacteroidia, playing an important role in hydrolysis during the anaerobic digestion.

Effects of Adding Zero Valent Iron on the Anaerobic Digestion of Cow Manure and Lignocellulose

Previous studies showed that adding zero valent iron (ZVI) can increase the methane production and degradation rate of organic waste by improving the performance of anaerobic digester. However, our study firstly found that ZVI (37 μm, 10 g/L) inhibited the anaerobic digestion (AD) of cow manure and lignocellulose. ZVI significantly increased the methanogenic rate of cow manure in the first 6 days, but decreased the accumulative methane yield and volatile fatty acids yield by 10.3 and 12%, respectively. The effect of ZVI on AD of liquid biomass separated from cow manure was positive, but the effect on solid biomass was negative. These results indicated that ZVI enhanced the AD of easily biodegradable organics but inhibited the biodegradation of refractory organics (lignocellulose). By analyzing the varying effects of ZVI in diverse anaerobic systems, it was found that the effects were influenced by the characteristics of substrate and inoculum-substrate ratio. This study suggested that only proper ZVI addition can improve the AD process depending on the feeding materials.

Optimization of Reactor Temperature for Continuous Anaerobic Digestion of Cow Manure: Bangladesh Perspective

Converting organic waste into energy through anaerobic digestion is gaining popularity day by day. The reactor temperature is considered as one of the most vital factors for the digestion process. An experiment was conducted in the Biogas Laboratory of Green Energy Knowledge Hub at Bangladesh Agricultural University (BAU) to examine the influence of temperature on anaerobic digestion of cow-dung. Laboratory-scale continuous stirred tank reactors with a working volume of 15 L were operated for a 30-day retention time. The reactors were set at 20 °C, 25 °C, 30 °C, 35 °C, 40 °C and 45 °C, respectively to determine the effect of temperature on anaerobic digestion performance. Different parameters like total solids, volatile solids, pH, volatile fatty acids, ammonia nitrogen, total nitrogen, biogas production rate and methane concentration were examined. Among all the reactors, the reactor at 40 °C temperature produced maximum biogas (312.43 L/kg VS) and methane yields (209.70 L/kg VS), followed by the reactors at 35 °C and 30 °C, respectively. Statistical analysis of the obtained experimental results using Minitab® showed that the optimum process performance in terms of methane yield and volatile solid degradation is achieved at a reactor temperature of 35.82 °C.

A review on application of enzymatic bioprocesses in animal wastewater and manure treatment

Enzymatic processing has been considered an interesting technology as enzymes play important roles in the process of waste bioconversion, whilst heling to develop valuable products from animal wastes. In this paper, the application of enzymes in animal waste management were critically reviewed in short with respect to utilization in: (i) animal wastewater treatment and (ii) animal manure management. The results indicate that the application of enzymes could increase both chemical oxygen demand (COD) removal efficiency and production of biogas. The enzymatic bioprocesses were found to be affected by the type, source and dosage of enzymes and the operating conditions. Further studies on optimizing the operating conditions and developing cost-effective enzymes for the future large-scale application are therefore necessary.

Anaerobic Co-Digestion of Kitchen Waste and Blackwater for Different Practical Application Scenarios in Decentralized Scale: From Wastes to Energy Recovery

This study was performed to investigate the anaerobic digestion feasibility of kitchen waste and blackwater under different scenarios in laboratory tests. According to biochemical methane potential tests, when the kitchen waste to blackwater solid ratio was 1:1, the cumulative methane production reached the highest amount at 313.2 mL/g volatile solids (VSs), which was 26.4% and 29.4% higher than the anaerobic monodigestion of kitchen waste and blackwater, respectively, indicating that the anaerobic codigestion of kitchen waste and blackwater had a synergetic effect. Furthermore, the effect of different initial total ammonia nitrogen concentrations in blackwater on anaerobic digestion was determined based on the above experimental results, thereby proving that reducing the total ammonia nitrogen concentration in blackwater can appropriately improve the efficiency of methane production. Therefore, anaerobic digestion is a suitable method for the biogas production of kitchen waste and blackwater. It is of great significance for the organic waste stream treatment of households in a decentralized scale, especially in rural areas.

Microorganisms and Enzymes Used in the Biological Pretreatment of the Substrate to Enhance Biogas Production: A Review

The pretreatment of lignocellulosic biomass (LC biomass) prior to the anaerobic digestion (AD) process is a mandatory step to improve feedstock biodegradability and biogas production. An important potential is provided by lignocellulosic materials since lignocellulose represents a major source for biogas production, thus contributing to the environmental sustainability. The main limitation of LC biomass for use is its resistant structure. Lately, biological pretreatment (BP) gained popularity because they are eco-friendly methods that do not require chemical or energy input. A large number of bacteria and fungi possess great ability to convert high molecular weight compounds from the substrate into lower mass compounds due to the synthesis of microbial extracellular enzymes. Microbial strains isolated from various sources are used singly or in combination to break down the recalcitrant polymeric structures and thus increase biogasgeneration. Enzymatic treatment of LC biomass depends mainly on enzymes like hemicellulases and cellulases generated by microorganisms. The articles main purpose is to provide an overview regarding the enzymatic/biological pretreatment as one of the most potent techniques for enhancing biogas production.

Critical evidence for direct interspecies electron transfer with tungsten-based accelerants: An experimental and theoretical investigation

Accelerants can significantly enhance the biodegradability in anaerobic digestion (AD), which can be attributed to the direct interspecies electron transfer (DIET) mechanism. However, critical evidence for DIET mechanism is absent. In this work, nano-scale tungsten (W)-based compounds (WC, W₂N, and W₁₈O₄₉) are employed to clarify the roles of W-based accelerants in AD systems. A DIET mechanism based on the W-based accelerants is proposed, and three critical pieces of evidence are provided: (i) First-principle density functional theory calculations provide theoretical evidence, illustrating that W-based accelerants are of zero band gap. (ii) Electrical conductivity evaluation further elucidates that W-based accelerants have superior electronic transport. (iii) Pyrosequencing of 16S rRNA gene confirms the existence of acetogens and methanogens in AD systems, which can act as electron-donor bacteria and electron-acceptor archaea, respectively. Combining theoretical with experimental results, the critical evidence provides a general strategy for understanding the DIET mechanism of accelerant in AD systems.

Impacts of Cellulase and Amylase on Enzymatic Hydrolysis and Methane Production in the Anaerobic Digestion of Corn Straw

The impacts of enzyme pre-treatments on anaerobic digestion of lignocellulosic biomass were explored by using corn straw as a substrate for enzyme pre-treatment and anaerobic digestion and by utilizing starch and microcrystalline cellulose as substrates for comparative analysis. The cellulase pre-treatment effectively improved the enzymatic hydrolysis of cellulose, decreased the crystallinity, and consequently showed 33.2% increase in methane yield. The methane yield of starch increased by 16.0% through amylase pre-treatment. However, when the substrate was corn straw, both the efficiencies of enzymes and methane production were markedly reduced by the lignocellulosic structure. The corn straw’s methane yields were 277.6 and 242.4 mL·CH4/g·VS with cellulase and amylase pre-treatment, respectively, which was 11.7% and 27.9% higher than that of the untreated corn straw. It may imply that the lignocellulose should be broken up firstly, enzyme pre-treatments could have great potentials when combined with other methods.

Enzymatic pretreatment to enhance anaerobic bioconversion of high strength wastewater to biogas: A review

Oil and grease, carbohydrate, protein, and lignin are the main constituents of high strength wastewaters such as dairy wastewater, cheese whey wastewater, distillery wastewater, pulp and paper mill wastewater, and slaughterhouse wastewaters. These constituents have contributed to various operational problems faced by the high-rate anaerobic bioreactor (HRAB). During the hydrolysis stage of anaerobic digestion (AD), these constituents can be hydrolyzed. Since hydrolysis is known to be the rate-limiting step of AD, the overall AD can be enhanced by improving the hydrolysis stage. This can be done by introducing pretreatment that targets the degradation of these constituents. This review mainly focuses on the biological pretreatment on various high-strength wastewaters by using different types of enzymes namely lipase, amylase, protease, and ligninolytic enzymes which are responsible for catalyzing the degradation of oil and grease, carbohydrate, protein, and lignin respectively. This review provides a summary of enzymatic systems involved in enhancing the hydrolysis stage and consequently improve biogas production. The results show that the use of enzymes improves the biogas production in the range of 7 to 76%. Though these improvements are highly dependent on the operating conditions of pretreatment and the types of substrates. Therefore, the critical parameters that would affect the effectiveness of pretreatment are also discussed. This review paper will serve as a useful piece of information to those industries that face difficulties in treating their high-strength wastewaters for the appropriate process, equipment selection, and design of an anaerobic enzymatic system. However, more intensive studies on the optimum operating conditions of pretreatment in a larger-scale and synergistic effects between enzymes are necessary to make the enzymatic pretreatment economically feasible.

Multi-hydrolytic enzyme accumulation and microbial community structure of anaerobic co-digestion of food waste and waste-activated sludge

The accumulation of multi-hydrolytic enzyme through anaerobic co-digestion of waste-activated sludge (WAS) and food waste (FW) was studied by regulating temperature, pH and the mass ratio of FW to WAS (F/W). Experimental results showed that temperature had a profound effect on the activity of the enzyme and the most suitable temperatures for the accumulation of amylase and protease were 37°C and 50°C, respectively. The highest activity of amylase and protease accumulated reached 10.29 and 19.23 U/mL at an F/W ratio of 2:1. The addition of anaerobic co-digestion solution enriching protease and amylase had positive effects on the hydrolysis of WAS. In addition, the Illumina high-throughput sequencing demonstrated that the bacterial diversity decreased, but the bacterial abundance increased during the co-digestion process of WAS and FW. The predominant strains for secreting amylase were Lactobacillus and Clostridium-sensu-strito-1, and Aeromonas was the dominant strain for secreting protease.

Mesophilic anaerobic co-digestion of acorn slag waste with dairy manure in a batch digester: Focusing on mixing ratios and bio-based carbon accelerants

Co-digestion of acorn slag waste (ASW) and dairy manure (DM) with two bio-based carbon (BC) accelerants are investigated via batch experiments under mesophilic condition. With the favorable synergistic effect of the mixed substrate and BC accelerant, the anaerobic digestion (AD) systems assembled with aloe peel-derived BC (2.16 g/L) show significantly improved methanogenesis on the basis of the optimum wet weight ratio of ASW to DM (1:3). The cumulative biogas yield is 580.9 mL/g VS, and the total chemical oxygen demand reduction is 79.37%. These results are higher than those of the AD systems without carbon-based accelerants. The feasibility of digestate utilization is evaluated by thermal and fertilizer analyses, which manifest outstanding stability and excellent fertility (6.93%-7.40%) of digestate in co-digestion systems. A general strategy for understanding the enhanced methanogenesis pathways, induced by BC in AD systems, is demonstrated. These important findings open an innovative opportunity for developing carbon-based accelerants in anaerobic co-digestion.

Optimization of the co-digestion of sewage sludge, maize straw and cow manure: microbial responses and effect of fractional organic characteristics

The aim of this study was to evaluate the efficiency and optimization of co-digestion using sewage sludge (SS), maize straw (MS) and cow manure (CM) as feeds, and the effects of the mixing ratio and C/N ratio of the substrates were analyzed in detail. Among the three substrates tested, CM/MS exhibited better digestion than CM/SS and SS/MS in terms of all measures, including total daily biogas and net methane volume production, due to the hydrophilic characteristics and high level of biodegradability of CM, as well as its higher C/N ratio. The average biogas production was 613.8 mL/g VS for the co-digestion of CM/MS at a feed concentration of 15 g VS/L and using a 1:1 mixing ratio (C/N ratio of 28.3). The co-digestion of SS/CM/MS performed better than the individual digestion of the components because of the balanced C/N ratios and supply of carbon. The optimum conditions for maximizing methane potential were an SS:CM:MS ratio of 30:35:35 and a bulk VS concentration of 15.0 g VS/L, which led to a maximum methane production of 8047.31 mL (C/N ratio of 12.7). The high-throughput sequencing analysis showed clear differences in microbial communities during the entire co-digestion process.

Simulated reactive zone with emulsified vegetable oil for the long-term remediation of Cr(VI)-contaminated aquifer: dynamic evolution of geological parameters and groundwater microbial community

Cr(VI), which is highly toxic and soluble, is one of the most challenging groundwater contaminants. Previous work has indicated that emulsified vegetable oil (EVO) is an effective in situ amendment for removing Cr(VI) from groundwater. However, the spatial and temporal changes in geological parameters and microbial community structures throughout the remediation period are poorly understood. In this study, a large laboratory-scale sand-packed chamber (reactive zone of 100 × 50 × 30 cm) was used to simulate the bioremediation of Cr(VI)-contaminated aquifer by EVO over a 512-day period. Various geological parameters and microbial communities were monitored during both the establishment and remediation stages. The results indicate that several biogeochemical reactions occurred in a specific sequence following the injection of EVO, creating an acidic and reducing environment. A shift in the community structure and a decrease in the community diversity were observed. The abundance of microbes involved in the degradation of EVO and reduction of electron acceptors significantly increased. Then, the EVO reactive zone was flushed with Cr(VI)-contaminated groundwater. Biogeochemical reactions were inhibited after the inflow of Cr(VI) and subsequently recovered a month later. The pH of the aquifer returned to the initial neutral condition (approximately 7.2). The EVO reactive zone could remediate Cr(VI)-contaminated groundwater at an efficiency exceeding 97% over 480 days. Biogeochemistry played a major role in the early period (0~75 days). In the later period (240~480 days), the remediation of Cr(VI) in the reactive zone depended mostly on bio-reduction by Cr(VI)-reducing bacteria.

Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants

The production of biogas by anaerobic digestion (AD) of agricultural residues, organic wastes, animal excrements, municipal sludge, and energy crops has a firm place in sustainable energy production and bio-economy strategies. Focusing on the microbial community involved in biomass conversion offers the opportunity to control and engineer the biogas process with the objective to optimize its efficiency. Taxonomic profiling of biogas producing communities by means of high-throughput 16S rRNA gene amplicon sequencing provided high-resolution insights into bacterial and archaeal structures of AD assemblages and their linkages to fed substrates and process parameters. Commonly, the bacterial phyla Firmicutes and Bacteroidetes appeared to dominate biogas communities in varying abundances depending on the apparent process conditions. Regarding the community of methanogenic Archaea, their diversity was mainly affected by the nature and composition of the substrates, availability of nutrients and ammonium/ammonia contents, but not by the temperature. It also appeared that a high proportion of 16S rRNA sequences can only be classified on higher taxonomic ranks indicating that many community members and their participation in AD within functional networks are still unknown. Although cultivation-based approaches to isolate microorganisms from biogas fermentation samples yielded hundreds of novel species and strains, this approach intrinsically is limited to the cultivable fraction of the community. To obtain genome sequence information of non-cultivable biogas community members, metagenome sequencing including assembly and binning strategies was highly valuable. Corresponding research has led to the compilation of hundreds of metagenome-assembled genomes (MAGs) frequently representing novel taxa whose metabolism and lifestyle could be reconstructed based on nucleotide sequence information. In contrast to metagenome analyses revealing the genetic potential of microbial communities, metatranscriptome sequencing provided insights into the metabolically active community. Taking advantage of genome sequence information, transcriptional activities were evaluated considering the microorganism's genetic background. Metaproteome studies uncovered enzyme profiles expressed by biogas community members. Enzymes involved in cellulose and hemicellulose decomposition and utilization of other complex biopolymers were identified. Future studies on biogas functional microbial networks will increasingly involve integrated multi-omics analyses evaluating metagenome, transcriptome, proteome, and metabolome datasets.

Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants

The production of biogas by anaerobic digestion (AD) of agricultural residues, organic wastes, animal excrements, municipal sludge, and energy crops has a firm place in sustainable energy production and bio-economy strategies. Focusing on the microbial community involved in biomass conversion offers the opportunity to control and engineer the biogas process with the objective to optimize its efficiency. Taxonomic profiling of biogas producing communities by means of high-throughput 16S rRNA gene amplicon sequencing provided high-resolution insights into bacterial and archaeal structures of AD assemblages and their linkages to fed substrates and process parameters. Commonly, the bacterial phyla Firmicutes and Bacteroidetes appeared to dominate biogas communities in varying abundances depending on the apparent process conditions. Regarding the community of methanogenic Archaea, their diversity was mainly affected by the nature and composition of the substrates, availability of nutrients and ammonium/ammonia contents, but not by the temperature. It also appeared that a high proportion of 16S rRNA sequences can only be classified on higher taxonomic ranks indicating that many community members and their participation in AD within functional networks are still unknown. Although cultivation-based approaches to isolate microorganisms from biogas fermentation samples yielded hundreds of novel species and strains, this approach intrinsically is limited to the cultivable fraction of the community. To obtain genome sequence information of non-cultivable biogas community members, metagenome sequencing including assembly and binning strategies was highly valuable. Corresponding research has led to the compilation of hundreds of metagenome-assembled genomes (MAGs) frequently representing novel taxa whose metabolism and lifestyle could be reconstructed based on nucleotide sequence information. In contrast to metagenome analyses revealing the genetic potential of microbial communities, metatranscriptome sequencing provided insights into the metabolically active community. Taking advantage of genome sequence information, transcriptional activities were evaluated considering the microorganism's genetic background. Metaproteome studies uncovered enzyme profiles expressed by biogas community members. Enzymes involved in cellulose and hemicellulose decomposition and utilization of other complex biopolymers were identified. Future studies on biogas functional microbial networks will increasingly involve integrated multi-omics analyses evaluating metagenome, transcriptome, proteome, and metabolome datasets.

Study on improving anaerobic co-digestion of cow manure and corn straw by fruit and vegetable waste: Methane production and microbial community in CSTR process

Based on continuous anaerobic co-digestion of cow manure with available carbon slowly released corn straw, the effect of adding available carbon quickly released fruit and vegetable waste (FVW) was explored, meanwhile microbial community variation was studied in this study. When the FVW added was 5% and 1%, the methane production of the cow manure and corn straw was improved, and the start-up process was shortened. With higher proportion of FVW to 5%, the performance was superior with a mean methane yield increase of 22.4%, and a greater variation of bacterial communities was observed. FVW enhanced the variation of the bacterial communities. The microbial community structure changed during fermentation and showed a trend toward a diverse and balance system. Therefore, the available carbon quickly released FVW was helpful to improve the anaerobic co-digestion of the cow manure and available carbon slowly released corn straw.

A critical review on the interaction of substrate nutrient balance and microbial community structure and function in anaerobic co-digestion

Anaerobic co-digestion generally results in a higher yield of biogas than mono-digestion, hence co-digestion has become a topic of general interest in recent studies of anaerobic digestion. Compared with mono-digestion, co-digestion utilizes multiple substrates. The balance of substrate nutrient in co-digestion comprises better adjustments of C/N ratio, pH, moisture, trace elements, and dilution of toxic substances. All of these changes could result in positive shifts in microbial community structure and function in the digestion processes and consequent augmentation of biogas production. Nevertheless, there have been few reviews on the interaction of nutrient and microbial community in co-digestions. The objective of this review is to investigate recent achievements and perspectives on the interaction of substrate nutrient balance and microbial community structure and function. This may provide valuable information on the optimization of combinations of substrates and prediction of bioreactor performance.