Bacterial communities associated with mushrooms in the Qinghai-Tibet Plateau are shaped by soil parameters

Fungi capable of producing fruit bodies are essential food and medicine resources. Despite recent advances in the study of microbial communities in mycorrhizospheres, little is known about the bacterial communities contained in fruit bodies. Using high-throughput sequencing, we investigated the bacterial communities in four species of mushrooms located on the alpine meadow and saline-alkali soil of the Qinghai-Tibet Plateau (QTP). Proteobacteria (51.7% on average) and Actinobacteria (28.2% on average) were the dominant phyla in all of the sampled fairy ring fruit bodies, and Acidobacteria (27.5% on average) and Proteobacteria (25.7% on average) dominated their adjacent soils. For the Agria. Bitorquis, Actinobacteria was the dominant phylum in its fruit body (67.5% on average) and adjacent soils (65.9% on average). The alpha diversity (i.e., Chao1, Shannon, Richness, and Simpson indexes) of the bacterial communities in the fruit bodies were significantly lower than those in the soil samples. All of the fungi shared more than half of their bacterial phyla and 16.2% of their total operational taxonomic units (OTUs) with their adjacent soil. Moreover, NH₄⁺ and pH were the key factors associated with bacterial communities in the fruit bodies and soils, respectively. These results indicate that the fungi tend to create a unique niche that selects for specific members of the bacterial community. Using culture-dependent methods, we also isolated 27 bacterial species belonging to three phyla and five classes from fruit bodies and soils. The strains isolated will be useful for future research on interactions between mushroom-forming fungi and their bacterial endosymbionts.

Effect of Fungal Species on the Development and Reproductive Traits of the Fungal-Feeding Mite Rhizoglyphus robini (Astigmata: Acaridae)

The bulb mite, Rhizoglyphus robini (Claparède; Astigmata: Acaridae), is a cosmopolitan pest with a broad host range, including commercially grown edible fungi in China. In this study, we recorded the development and reproductive traits of the bulb mite reared on four mushroom species: Agaricus bisporus Lange, Pleurotus ostreatus Kumm, Pleurotus pulmonarius (Fr.) Quél., and Lentinula edodes (Berk.) Pegler at six constant temperatures ranging from 15 to 31°C and 80% RH. Developmental time for the immature stages was significantly affected by fungal species, ranging from 9.45 ± 1.83 d (reared on L. edodes at 31°C) to 26.39 ± 2.10 d (reared on A. bisporus at 15°C). Edible fungi species significantly affected intrinsic rates of natural increase (rm) at 31°C (varied from 0.23 to 0.28) as did the mite's net reproductive rates (R0) (103.78, 90.43, 70.77, and 97.45, respectively). Longevity, fecundity and female lifespan were dependent on host fungi.

Time-Mortality Relationships to Control Tyrophagus putrescentiae (Sarcoptiformes: Acaridae) Exposed to High and Low Temperatures

Tyrophagus putrescentiae (Schrank) (Sarcoptiformes: Acaridae) is a widely distributed pest species that is of significant economic importance for dry-cured country hams. Methyl bromide was used for decades in country ham plants to control this pest, but now this fumigant is recognized as an atmospheric ozone-depleting compound and will be phased out for all uses in the near future. Of various chemical and nonchemical alternatives to methyl bromide, extreme temperatures are viable and straightforward nonchemical methods to control pests. This study evaluated the efficacy of high and low temperatures on mortality of mold mite in the laboratory. Ten eggs and a mixture of 40 adults and nymphs were separately exposed to different high and low temperatures, ranging from +35 to 45 °C and from -20 to +5 °C, for several periods of time. Mortality was assessed after a recovery period for each life stage. Tyrophagus putrescentiae eggs were found to be more tolerant to both high and low temperatures than were the mobile stages. Results showed that high temperatures from 40-45 °C killed all mites within 4 to 1 d, respectively, while -10 °C or lower killed all mites in less than 1 d. Regression analyses of mortality data as a function of exposure predicted times for achieving desired levels of mite mortality. This study suggests that extreme temperature treatment can play an important role in integrated pest management programs for dry-cured ham as an alternative to methyl bromide or other chemical treatments.

Efficacy of selected food-safe compounds to prevent infestation of the ham mite, Tyrophagus putrescentiae (Schrank) (Acarina: Acaridae), on southern dry-cured hams

BACKGROUND

Tyrophagus putrescentiae (Schrank) is a serious mite pest of dried meats and cheeses. Infestations of T. putrescentiae are controlled with the fumigant methyl bromide, which is an ozone-depleting substance and is currently being banned in most countries. Effective alternatives to methyl bromide are needed. The objective of this research was to use laboratory assays to investigate the effectiveness of food-safe compounds for preventing infestation of T. putrescentiae on dry-cured hams.

RESULTS

Ham pieces dipped in solutions of either propylene glycol (1,2-propanediol), lard, ethoxyquin or butylated hydroxytoluene prevented or significantly reduced mite population growth. Behavioral assays revealed that more mites oriented to the untreated control ham cubes, and more eggs were laid on these untreated ham cubes, compared with cubes treated with various dips. Our results also indicated that a combination of carrageenan + propylene glycol alginate + 40% propylene glycol was effective in reducing mite numbers on whole aging hams compared with untreated whole hams.

CONCLUSIONS

Several food-safe compounds can prevent infestation of T. putrescentiae on dry-cured hams and may represent alternatives for managing this pest. © 2015 Society of Chemical Industry.

Populations of Stored Product Mite Tyrophagus putrescentiae Differ in Their Bacterial Communities

Background:Tyrophagus putrescentiae colonizes different human-related habitats and feeds on various post-harvest foods. The microbiota acquired by these mites can influence the nutritional plasticity in different populations. We compared the bacterial communities of five populations of T. putrescentiae and one mixed population of T. putrescentiae and T. fanetzhangorum collected from different habitats.

Material: The bacterial communities of the six mite populations from different habitats and diets were compared by Sanger sequencing of cloned 16S rRNA obtained from amplification with universal eubacterial primers and using bacterial taxon-specific primers on the samples of adults/juveniles or eggs. Microscopic techniques were used to localize bacteria in food boli and mite bodies. The morphological determination of the mite populations was confirmed by analyses of CO1 and ITS fragment genes.

Results: The following symbiotic bacteria were found in compared mite populations: Wolbachia (two populations), Cardinium (five populations), Bartonella-like (five populations), Blattabacterium-like symbiont (three populations), and Solitalea-like (six populations). From 35 identified OTUs₉₇, only Solitalea was identified in all populations. The next most frequent and abundant sequences were Bacillus, Moraxella, Staphylococcus, Kocuria, and Microbacterium. We suggest that some bacterial species may occasionally be ingested with food. The bacteriocytes were observed in some individuals in all mite populations. Bacteria were not visualized in food boli by staining, but bacteria were found by histological means in ovaria of Wolbachia-infested populations.

Conclusion: The presence of Blattabacterium-like, Cardinium, Wolbachia, and Solitalea-like in the eggs of T. putrescentiae indicates mother to offspring (vertical) transmission. Results of this study indicate that diet and habitats influence not only the ingested bacteria but also the symbiotic bacteria of T. putrescentiae.

Insights Into the Evolution of Chemoreceptor Genes Superfamily in Tyrophagus putrescentiae (Acari: Acaridae)

All living organisms, including animals, plants, fungi, and bacteria, use the olfactory system to recognize chemicals or pheromone from their environment. Insects detect a volatile substance using odorant receptors (ORs) or gustatory receptors (GRs) and ionotropic receptors (IRs). The gene families of the olfactory system in Acari are still not clear. In this study, we identified seven ORs, one GR, and five IRs from the transcriptome of the storage mite, Tyrophagus putrescentiae Schrank. No olfactory coreceptor was found in this transcriptome. Phylogenetic analysis of these gene families with other Arthropoda species revealed the conservation of carbon dioxide receptors in all tested flying insects and T. putrescentiae Most of these ORs and GRs were unique to three mosquitoes (Anopheles gambiae Giles, Culex quinquefasciatus Say, and Aedes aegypti L.), Ixodes scapularis Say and Pediculus humanus L., indicating their involvement in specific aspects of both gustatory and olfactory perception. Some clades contained receptors obtained from all tested insect vector species, indicating a degree of conservation among some vector-dependent OR lineages. IRs family was a highly dynamic and independent original of the chemoreceptor genes subfamily. Our findings would make it possible for future research on the chemosensory recognition mechanism in Acari.

A Novel Extracellular Gut Symbiont in the Marine Worm Priapulus caudatus (Priapulida) Reveals an Alphaproteobacterial Symbiont Clade of the Ecdysozoa

Priapulus caudatus (phylum Priapulida) is a benthic marine predatory worm with a cosmopolitan distribution. In its digestive tract we detected symbiotic bacteria that were consistently present in specimens collected over 8 years from three sites at the Swedish west coast. Based on their 16S rRNA gene sequence, these symbionts comprise a novel genus of the order Rickettsiales (Alphaproteobacteria). Electron microscopy and fluorescence in situ hybridization (FISH) identified them as extracellular, elongate bacteria closely associated with the microvilli, for which we propose the name “Candidatus Tenuibacter priapulorum”. Within Rickettsiales, they form a phylogenetically well-defined, family-level clade with uncultured symbionts of marine, terrestrial, and freshwater arthropods. Cand. Tenuibacter priapulorum expands the host range of this candidate family from Arthropoda to the entire Ecdysozoa, which may indicate an evolutionary adaptation of this bacterial group to the microvilli-lined guts of the Ecdysozoa.