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DePiero VJ, Borghuis BG. Phase advancing is a common property of multiple neuron classes in the mouse retina. eNeuro 2022; 9:ENEURO.0270-22.2022. [PMID: 35995559 PMCID: PMC9450563 DOI: 10.1523/eneuro.0270-22.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 08/11/2022] [Accepted: 08/18/2022] [Indexed: 11/21/2022] Open
Abstract
Behavioral interactions with moving objects are challenged by response latencies within the sensory and motor nervous systems. In vision, the combined latency from phototransduction and synaptic transmission from the retina to central visual areas amounts to 50-100 ms, depending on stimulus conditions. Time required for generating appropriate motor output adds to this latency and further compounds the behavioral delay. Neuronal adaptations that help counter sensory latency within the retina have been demonstrated in some species, but how general these specializations are, and where in the circuitry they originate, remains unclear. To address this, we studied the timing of object motion-evoked responses at multiple signaling stages within the mouse retina using two-photon fluorescence calcium and glutamate imaging, targeted whole-cell electrophysiology, and computational modeling. We found that both ON and OFF-type ganglion cells, as well as the bipolar cells that innervate them, temporally advance the position encoding of a moving object and so help counter the inherent signaling delay in the retina. Model simulations show that this predictive capability is a direct consequence of the spatial extent of the cells' linear visual receptive field, with no apparent specialized circuits that help predict beyond it.Significance StatementSignal transduction and synaptic transmission within sensory signaling pathways costs time. Not a lot of time, just tens to a few hundred milliseconds depending on the sensory system, but enough to challenge fast behavioral interactions under dynamic stimulus conditions, like catching a moving fly. To counter neuronal delays, nervous systems of many species use anticipatory mechanisms. One such mechanism in the mammalian visual system helps predict the future position of a moving target through a process called phase advancing. Here we ask for functionally diverse neuron populations in the mouse retina how common is phase advancing and demonstrate that it is common and generated at multiple signaling stages.
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Affiliation(s)
- Victor J DePiero
- Department of Anatomical Sciences and Neurobiology, University of Louisville School of Medicine, Louisville, KY 40202, USA
- Department of Biology, University of Virginia, Charlottesville, VA 22904, USA
| | - Bart G Borghuis
- Department of Anatomical Sciences and Neurobiology, University of Louisville School of Medicine, Louisville, KY 40202, USA
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2
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Abstract
An ultimate goal in retina science is to understand how the neural circuit of the retina processes natural visual scenes. Yet most studies in laboratories have long been performed with simple, artificial visual stimuli such as full-field illumination, spots of light, or gratings. The underlying assumption is that the features of the retina thus identified carry over to the more complex scenario of natural scenes. As the application of corresponding natural settings is becoming more commonplace in experimental investigations, this assumption is being put to the test and opportunities arise to discover processing features that are triggered by specific aspects of natural scenes. Here, we review how natural stimuli have been used to probe, refine, and complement knowledge accumulated under simplified stimuli, and we discuss challenges and opportunities along the way toward a comprehensive understanding of the encoding of natural scenes. Expected final online publication date for the Annual Review of Vision Science, Volume 8 is September 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Dimokratis Karamanlis
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany.,Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany.,International Max Planck Research School for Neurosciences, Göttingen, Germany
| | - Helene Marianne Schreyer
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany.,Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany
| | - Tim Gollisch
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany.,Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany.,Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Göttingen, Germany
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3
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Zapp SJ, Nitsche S, Gollisch T. Retinal receptive-field substructure: scaffolding for coding and computation. Trends Neurosci 2022; 45:430-445. [DOI: 10.1016/j.tins.2022.03.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 02/28/2022] [Accepted: 03/17/2022] [Indexed: 11/29/2022]
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4
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Rao A, Padhy D, Pal A, Roy AK. Visual function tests for glaucoma practice - What is relevant? Indian J Ophthalmol 2022; 70:749-758. [PMID: 35225508 PMCID: PMC9114550 DOI: 10.4103/ijo.ijo_1390_21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
Abstract
Glaucoma represents one of the most important ocular diseases causing irreversible ganglion cell death. It is one of the most common causes of visual impairment and morbidity in the elderly population. There are various tests for measuring visual function in glaucoma. While visual field remains the undisputed method for screening, diagnosis, and monitoring disease progression, other tests have been studied for their utility in glaucoma practice. This review discusses some of the commonly used tests of visual function that can be routinely used in clinics for glaucoma management. Among the various modalities of testing visual function in glaucoma, this review highlights the tests that are most clinically relevant.
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Affiliation(s)
- Aparna Rao
- Department of Glaucoma Services, L. V. Prasad Eye Institute, Bhubaneswar, Odisha, India
| | - Debananda Padhy
- Department of Glaucoma Services, L. V. Prasad Eye Institute, Bhubaneswar, Odisha, India
| | - Anindita Pal
- Department of Glaucoma Services, L. V. Prasad Eye Institute, Bhubaneswar, Odisha, India
| | - Avik Kumar Roy
- Department of Glaucoma Services, L. V. Prasad Eye Institute, Bhubaneswar, Odisha, India
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5
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Gao S, Liu X. Explaining Orientation Adaptation in V1 by Updating the State of a Spatial Model. Front Comput Neurosci 2022; 15:759254. [PMID: 35250523 PMCID: PMC8895385 DOI: 10.3389/fncom.2021.759254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Accepted: 12/06/2021] [Indexed: 11/17/2022] Open
Abstract
In this work, we extend an influential statistical model based on the spatial classical receptive field (CRF) and non-classical receptive field (nCRF) interactions (Coen-Cagli et al., 2012) to explain the typical orientation adaptation effects observed in V1. If we assume that the temporal adaptation modifies the “state” of the model, the spatial statistical model can explain all of the orientation adaptation effects in the context of neuronal output using small and large grating observed in neurophysiological experiments in V1. The “state” of the model represents the internal parameters such as the prior and the covariance trained on a mixed dataset that totally determine the response of the model. These two parameters, respectively, reflect the probability of the orientation component and the connectivity among neurons between CRF and nCRF. Specifically, we have two key findings: First, neural adapted results using a small grating that just covers the CRF can be predicted by the change of the prior of our model. Second, the change of the prior can also predict most of the observed results using a large grating that covers both CRF and nCRF of a neuron. However, the prediction of the novel attractive adaptation using large grating covering both CRF and nCRF also necessitates the involvement of a connectivity change of the center-surround RFs. In addition, our paper contributes a new prior-based winner-take-all (WTA) working mechanism derived from the statistical-based model to explain why and how all of these orientation adaptation effects can be predicted by relying on this spatial model without modifying its structure, a novel application of the spatial model. The research results show that adaptation may link time and space by changing the “state” of the neural system according to a specific adaptor. Furthermore, different forms of stimulus used for adaptation can cause various adaptation effects, such as an a priori shift or a connectivity change, depending on the specific stimulus size.
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Affiliation(s)
- Shaobing Gao
- College of Computer Science, Sichuan University, Chengdu, China
- *Correspondence: Shaobing Gao
| | - Xiao Liu
- Tomorrow Advancing Life Education Group (TAL), Beijing, China
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6
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Yedutenko M, Howlett MHC, Kamermans M. Enhancing the dark side: asymmetric gain of cone photoreceptors underpins their discrimination of visual scenes based on skewness. J Physiol 2021; 600:123-142. [PMID: 34783026 PMCID: PMC9300210 DOI: 10.1113/jp282152] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 11/11/2021] [Indexed: 11/08/2022] Open
Abstract
Psychophysical data indicate that humans can discriminate visual scenes based on their skewness, i.e. the ratio of dark and bright patches within a visual scene. It has also been shown that at a phenomenological level this skew discrimination is described by the so-called blackshot mechanism, which accentuates strong negative contrasts within a scene. Here, we present a set of observations suggesting that the underlying computation might start as early as the cone phototransduction cascade, whose gain is higher for strong negative contrasts than for strong positive contrasts. We recorded from goldfish cone photoreceptors and found that the asymmetry in the phototransduction gain leads to responses with larger amplitudes when using negatively rather than positively skewed light stimuli. This asymmetry in amplitude was present in the cone photocurrent, voltage response and synaptic output. Given that the properties of the phototransduction cascade are universal across vertebrates, it is possible that the mechanism shown here gives rise to a general ability to discriminate between scenes based only on their skewness, which psychophysical studies have shown humans can do. Thus, our data suggest the importance of non-linearity of the early photoreceptor for perception. Additionally, we found that stimulus skewness leads to a subtle change in photoreceptor kinetics. For negatively skewed stimuli, the impulse response functions of the cone peak later than for positively skewed stimuli. However, stimulus skewness does not affect the overall integration time of the cone. KEY POINTS: Humans can discriminate visual scenes based on skewness, i.e. the relative prevalence of bright and dark patches within a scene. Here, we show that negatively skewed time-series stimuli induce larger responses in goldfish cone photoreceptors than comparable positively skewed stimuli. This response asymmetry originates from within the phototransduction cascade, where gain is higher for strong negative contrasts (dark patches) than for strong positive contrasts (bright patches). Unlike the implicit assumption often contained within models of downstream visual neurons, our data show that cone photoreceptors do not simply relay linearly filtered versions of visual stimuli to downstream circuitry, but that they also emphasize specific stimulus features. Given that the phototransduction cascade properties among vertebrate retinas are mostly universal, our data imply that the skew discrimination by human subjects reported in psychophysical studies might stem from the asymmetric gain function of the phototransduction cascade.
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Affiliation(s)
- Matthew Yedutenko
- Retinal Signal Processing Laboratory, Netherlands Institute for Neuroscience, Amsterdam, The Netherlands
| | - Marcus H C Howlett
- Retinal Signal Processing Laboratory, Netherlands Institute for Neuroscience, Amsterdam, The Netherlands
| | - Maarten Kamermans
- Retinal Signal Processing Laboratory, Netherlands Institute for Neuroscience, Amsterdam, The Netherlands.,Department of Biomedical Physics and Biomedical Optics, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands
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Yedutenko M, Howlett MHC, Kamermans M. High Contrast Allows the Retina to Compute More Than Just Contrast. Front Cell Neurosci 2021; 14:595193. [PMID: 33519381 PMCID: PMC7843368 DOI: 10.3389/fncel.2020.595193] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2020] [Accepted: 12/22/2020] [Indexed: 11/29/2022] Open
Abstract
The goal of sensory processing is to represent the environment of an animal. All sensory systems share a similar constraint: they need to encode a wide range of stimulus magnitudes within their narrow neuronal response range. The most efficient way, exploited by even the simplest nervous systems, is to encode relative changes in stimulus magnitude rather than the absolute magnitudes. For instance, the retina encodes contrast, which are the variations of light intensity occurring in time and in space. From this perspective, it is easy to understand why the bright plumage of a moving bird gains a lot of attention, while an octopus remains motionless and mimics its surroundings for concealment. Stronger contrasts simply cause stronger visual signals. However, the gains in retinal performance associated with higher contrast are far more than what can be attributed to just a trivial linear increase in signal strength. Here we discuss how this improvement in performance is reflected throughout different parts of the neural circuitry, within its neural code and how high contrast activates many non-linear mechanisms to unlock several sophisticated retinal computations that are virtually impossible in low contrast conditions.
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Affiliation(s)
- Matthew Yedutenko
- Retinal Signal Processing Lab, Netherlands Institute for Neuroscience, Amsterdam, Netherlands
| | - Marcus H. C. Howlett
- Retinal Signal Processing Lab, Netherlands Institute for Neuroscience, Amsterdam, Netherlands
| | - Maarten Kamermans
- Retinal Signal Processing Lab, Netherlands Institute for Neuroscience, Amsterdam, Netherlands
- Department of Biomedical Physics and Biomedical Optics, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, Netherlands
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Horiguchi H, Suzuki E, Kubo H, Fujikado T, Asonuma S, Fujimoto C, Tatsumoto M, Fukuchi T, Sakaue Y, Ichimura M, Kurimoto Y, Yamamoto M, Nakadomari S. Efficient measurements for the dynamic range of human lightness perception. Jpn J Ophthalmol 2021; 65:432-8. [PMID: 33420857 DOI: 10.1007/s10384-020-00808-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 10/23/2020] [Indexed: 10/22/2022]
Abstract
PURPOSE Patients with an eye disease often report nyctalopia, hemianopia, and/or photophobia. We hypothesized that such symptoms are related to the disease impacting the dynamic range of lightness perception (DRL). However, there is currently no standardized approach for measuring DRL for clinical use. We developed an efficient measurement method to estimate DRL. STUDY DESIGN Clinical trial METHODS: Fifty-five photophobic patients with eye disease and 46 controls participated. Each participant judged the appearance of visual stimuli, a thick bar with luminance that gradually changed from maximum to minimum was displayed on uniform background. On different trials the background luminance changed pseudo-randomly between three levels. The participants repeatedly tapped a border on the bar that divided the appearance of grayish white/black and perfect white/black. We defined the DRL as the ratio between the luminance values at the tapped point of the border between gray and white/black. RESULTS The mean DRL of the patients was approximately 15 dB, significantly smaller than that of the controls (20 dB). The center of each patient's DRL shift depending on background luminance, which we named index of contextual susceptibility (iCS), was significantly larger than controls. The DRL of retinitis pigmentosa was smaller than controls for every luminance condition. Only the iCS of glaucoma was significantly larger than controls. CONCLUSIONS This measurement technique detects an abnormality of the DRL. The results support our hypothesis that the DRL abnormality characterizes lightness-relevant symptoms that may elucidate the causes of nyctalopia, hemeralopia, and photophobia.
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9
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Dai M, Liang PJ. Functional-pathway-dominant contrast adaptation and sensitization in mouse retinal ganglion cells. Cogn Neurodyn 2020; 14:757-67. [PMID: 33101529 DOI: 10.1007/s11571-020-09636-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Revised: 09/03/2020] [Accepted: 09/14/2020] [Indexed: 10/23/2022] Open
Abstract
Retinal ganglion cells (RGCs) reduce their light sensitivity during persistent high-contrast stimulation to prevent saturation to strong inputs and improve coding efficiency. This process is known as contrast adaptation. However, contrast adaptation also reduces RGCs' light response to weak inputs. On the other hand, some RGCs undergo contrast sensitization, and these RGCs respond to weak inputs following high contrast stimulation. In the present study, multi-electrode recordings were conducted on isolated mouse retinas under full-field visual stimulation with different contrast levels. Adaptation and sensitization were mainly observed in OFF and ON pathways, respectively. The results of linear-nonlinear analysis and stimulus reconstruction revealed that both the light sensitivity and encoded information were changed in opposite directions in adaptation and sensitization processes. Our work suggests that contrast adaptation and sensitization are two opposite dynamic processes. In mouse retina, OFF RGCs utilize adaptation to increase the discrimination of strong OFF inputs. On the other hand, ON RGCs use sensitization to increase the sensitivity to weak ON inputs. This functional differentiation might be meaningful for the mouse's survival as it lives in environments in which strong OFF stimuli often indicate potential predators while weak ON stimuli are usually related to movement and might be important for predation.
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10
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Matulis CA, Chen J, Gonzalez-Suarez AD, Behnia R, Clark DA. Heterogeneous Temporal Contrast Adaptation in Drosophila Direction-Selective Circuits. Curr Biol 2020; 30:222-236.e6. [PMID: 31928874 PMCID: PMC7003801 DOI: 10.1016/j.cub.2019.11.077] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2019] [Revised: 11/06/2019] [Accepted: 11/26/2019] [Indexed: 11/23/2022]
Abstract
In visual systems, neurons adapt both to the mean light level and to the range of light levels, or the contrast. Contrast adaptation has been studied extensively, but it remains unclear how it is distributed among neurons in connected circuits, and how early adaptation affects subsequent computations. Here, we investigated temporal contrast adaptation in neurons across Drosophila's visual motion circuitry. Several ON-pathway neurons showed strong adaptation to changes in contrast over time. One of these neurons, Mi1, showed almost complete adaptation on fast timescales, and experiments ruled out several potential mechanisms for its adaptive properties. When contrast adaptation reduced the gain in ON-pathway cells, it was accompanied by decreased motion responses in downstream direction-selective cells. Simulations show that contrast adaptation can substantially improve motion estimates in natural scenes. The benefits are larger for ON-pathway adaptation, which helps explain the heterogeneous distribution of contrast adaptation in these circuits.
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Affiliation(s)
- Catherine A Matulis
- Department of Physics, Yale University, 217 Prospect Street, New Haven, CT 06511, USA
| | - Juyue Chen
- Interdepartmental Neuroscience Program, Yale University, 333 Cedar Street, New Haven, CT 06510, USA
| | | | - Rudy Behnia
- Department of Neuroscience, Columbia University, 3227 Broadway, New York, NY 10027, USA
| | - Damon A Clark
- Department of Physics, Yale University, 217 Prospect Street, New Haven, CT 06511, USA; Interdepartmental Neuroscience Program, Yale University, 333 Cedar Street, New Haven, CT 06510, USA; Department of Molecular, Cellular, and Developmental Biology, Yale University, 260 Whitney Avenue, New Haven, CT 06511, USA; Department of Neuroscience, Yale University, 333 Cedar Street, New Haven, CT 06510, USA.
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11
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Abstract
An animal’s motion through the environment can induce large and frequent fluctuations in light intensity on the retina. These fluctuations pose a major challenge to neural circuits tasked with encoding visual information, as they can cause cells to adapt and lose sensitivity. Here, we report that sensitization, a short-term plasticity mechanism, solves this difficult computational problem by maintaining neuronal sensitivity in the face of these fluctuations. The numerically dominant output pathway in the macaque monkey retina, the midget (parvocellular-projecting) pathway, undergoes sensitization under specific conditions, including simulated eye movements. Sensitization is present in the excitatory synaptic inputs from midget bipolar cells and is mediated by presynaptic disinhibition from a wide-field mechanism extending >0.5 mm along the retinal surface. Direct physiological recordings and a computational model indicate that sensitization in the midget pathway supports accurate sensory encoding and prevents a loss of responsiveness during dynamic visual processing. Light intensity on the retina can fluctuate rapidly during natural vision, posing a challenge for encoding visual information. Here, the authors report that mechanisms of sensitization/facilitation maintain the sensitivity of the numerically dominant neural pathway in the primate retina during dynamic vision.
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Affiliation(s)
- Todd R Appleby
- Graduate Program in Neuroscience, University of Washington, Seattle, WA, 98195, USA.,Department of Ophthalmology, University of Washington, Seattle, WA, 98195, USA.,Vision Science Center, University of Washington, Seattle, WA, 98195, USA
| | - Michael B Manookin
- Department of Ophthalmology, University of Washington, Seattle, WA, 98195, USA. .,Vision Science Center, University of Washington, Seattle, WA, 98195, USA.
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12
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Kastner DB, Ozuysal Y, Panagiotakos G, Baccus SA. Adaptation of Inhibition Mediates Retinal Sensitization. Curr Biol 2019; 29:2640-2651.e4. [PMID: 31378605 DOI: 10.1016/j.cub.2019.06.081] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2018] [Revised: 05/14/2019] [Accepted: 06/27/2019] [Indexed: 11/22/2022]
Abstract
In response to a changing sensory environment, sensory systems adjust their neural code for a number of purposes, including an enhanced sensitivity for novel stimuli, prediction of sensory features, and the maintenance of sensitivity. Retinal sensitization is a form of short-term plasticity that elevates local sensitivity following strong, local, visual stimulation and has been shown to create a prediction of the presence of a nearby localized object. The neural mechanism that generates this elevation in sensitivity remains unknown. Using simultaneous intracellular and multielectrode recording in the salamander retina, we show that a decrease in tonic amacrine transmission is necessary for and is correlated spatially and temporally with ganglion cell sensitization. Furthermore, introducing a decrease in amacrine transmission is sufficient to sensitize nearby ganglion cells. A computational model accounting for adaptive dynamics and nonlinear pathways confirms a decrease in steady inhibitory transmission can cause sensitization. Adaptation of inhibition enhances the sensitivity to the sensory feature conveyed by an inhibitory pathway, creating a prediction of future input.
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13
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Martelli C, Fiala A. Slow presynaptic mechanisms that mediate adaptation in the olfactory pathway of Drosophila. eLife 2019; 8:43735. [PMID: 31169499 PMCID: PMC6581506 DOI: 10.7554/elife.43735] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2018] [Accepted: 06/05/2019] [Indexed: 12/14/2022] Open
Abstract
The olfactory system encodes odor stimuli as combinatorial activity of populations of neurons whose response depends on stimulus history. How and on which timescales previous stimuli affect these combinatorial representations remains unclear. We use in vivo optical imaging in Drosophila to analyze sensory adaptation at the first synaptic step along the olfactory pathway. We show that calcium signals in the axon terminals of olfactory receptor neurons (ORNs) do not follow the same adaptive properties as the firing activity measured at the antenna. While ORNs calcium responses are sustained on long timescales, calcium signals in the postsynaptic projection neurons (PNs) adapt within tens of seconds. We propose that this slow component of the postsynaptic response is mediated by a slow presynaptic depression of vesicle release and enables the combinatorial population activity of PNs to adjust to the mean and variance of fluctuating odor stimuli.
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Affiliation(s)
- Carlotta Martelli
- Molecular Neurobiology of Behavior, Johann-Friedrich-Blumenbach-Institute for Zoology and Anthropology, University of Goettingen, Goettingen, Germany.,Department of Biology, Neurobiology, University of Konstanz, Konstanz, Germany
| | - André Fiala
- Molecular Neurobiology of Behavior, Johann-Friedrich-Blumenbach-Institute for Zoology and Anthropology, University of Goettingen, Goettingen, Germany
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14
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Ozuysal Y, Kastner DB, Baccus SA. Adaptive feature detection from differential processing in parallel retinal pathways. PLoS Comput Biol 2018; 14:e1006560. [PMID: 30457994 PMCID: PMC6245510 DOI: 10.1371/journal.pcbi.1006560] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Accepted: 10/11/2018] [Indexed: 11/25/2022] Open
Abstract
To transmit information efficiently in a changing environment, the retina adapts to visual contrast by adjusting its gain, latency and mean response. Additionally, the temporal frequency selectivity, or bandwidth changes to encode the absolute intensity when the stimulus environment is noisy, and intensity differences when noise is low. We show that the On pathway of On-Off retinal amacrine and ganglion cells is required to change temporal bandwidth but not other adaptive properties. This remarkably specific adaptive mechanism arises from differential effects of contrast on the On and Off pathways. We analyzed a biophysical model fit only to a cell’s membrane potential, and verified pharmacologically that it accurately revealed the two pathways. We conclude that changes in bandwidth arise mostly from differences in synaptic threshold in the two pathways, rather than synaptic release dynamics as has previously been proposed to underlie contrast adaptation. Different efficient codes are selected by different thresholds in two independently adapting neural pathways.
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Affiliation(s)
- Yusuf Ozuysal
- Department of Electrical Engineering, Stanford University, Stanford, CA, United States of America
| | - David B. Kastner
- Neuroscience Program, Stanford University, Stanford, CA, United States of America
| | - Stephen A. Baccus
- Department of Neurobiology, Stanford University, Stanford, CA, United States of America
- * E-mail:
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15
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Cooke JE, King AJ, Willmore BDB, Schnupp JWH. Contrast gain control in mouse auditory cortex. J Neurophysiol 2018; 120:1872-1884. [PMID: 30044164 PMCID: PMC6230796 DOI: 10.1152/jn.00847.2017] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Revised: 07/18/2018] [Accepted: 07/20/2018] [Indexed: 11/22/2022] Open
Abstract
The neocortex is thought to employ a number of canonical computations, but little is known about whether these computations rely on shared mechanisms across different neural populations. In recent years, the mouse has emerged as a powerful model organism for the dissection of the circuits and mechanisms underlying various aspects of neural processing and therefore provides an important avenue for research into putative canonical computations. One such computation is contrast gain control, the systematic adjustment of neural gain in accordance with the contrast of sensory input, which helps to construct neural representations that are robust to the presence of background stimuli. Here, we characterized contrast gain control in the mouse auditory cortex. We performed laminar extracellular recordings in the auditory cortex of the anesthetized mouse while varying the contrast of the sensory input. We observed that an increase in stimulus contrast resulted in a compensatory reduction in the gain of neural responses, leading to representations in the mouse auditory cortex that are largely contrast invariant. Contrast gain control was present in all cortical layers but was found to be strongest in deep layers, indicating that intracortical mechanisms may contribute to these gain changes. These results lay a foundation for investigations into the mechanisms underlying contrast adaptation in the mouse auditory cortex. NEW & NOTEWORTHY We investigated whether contrast gain control, the systematic reduction in neural gain in response to an increase in sensory contrast, exists in the mouse auditory cortex. We performed extracellular recordings in the mouse auditory cortex while presenting sensory stimuli with varying contrasts and found this form of processing was widespread. This finding provides evidence that contrast gain control may represent a canonical cortical computation and lays a foundation for investigations into the underlying mechanisms.
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Affiliation(s)
- James E Cooke
- Department of Physiology, Anatomy and Genetics, University of Oxford , Oxford , United Kingdom
- University College London , United Kingdom
| | - Andrew J King
- Department of Physiology, Anatomy and Genetics, University of Oxford , Oxford , United Kingdom
| | - Ben D B Willmore
- Department of Physiology, Anatomy and Genetics, University of Oxford , Oxford , United Kingdom
| | - Jan W H Schnupp
- Department of Physiology, Anatomy and Genetics, University of Oxford , Oxford , United Kingdom
- Department of Biomedical Sciences, City University of Hong Kong , Hong Kong
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16
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Maheswaranathan N, Kastner DB, Baccus SA, Ganguli S. Inferring hidden structure in multilayered neural circuits. PLoS Comput Biol 2018; 14:e1006291. [PMID: 30138312 PMCID: PMC6124781 DOI: 10.1371/journal.pcbi.1006291] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2017] [Revised: 09/05/2018] [Accepted: 06/09/2018] [Indexed: 01/26/2023] Open
Abstract
A central challenge in sensory neuroscience involves understanding how neural circuits shape computations across cascaded cell layers. Here we attempt to reconstruct the response properties of experimentally unobserved neurons in the interior of a multilayered neural circuit, using cascaded linear-nonlinear (LN-LN) models. We combine non-smooth regularization with proximal consensus algorithms to overcome difficulties in fitting such models that arise from the high dimensionality of their parameter space. We apply this framework to retinal ganglion cell processing, learning LN-LN models of retinal circuitry consisting of thousands of parameters, using 40 minutes of responses to white noise. Our models demonstrate a 53% improvement in predicting ganglion cell spikes over classical linear-nonlinear (LN) models. Internal nonlinear subunits of the model match properties of retinal bipolar cells in both receptive field structure and number. Subunits have consistently high thresholds, supressing all but a small fraction of inputs, leading to sparse activity patterns in which only one subunit drives ganglion cell spiking at any time. From the model’s parameters, we predict that the removal of visual redundancies through stimulus decorrelation across space, a central tenet of efficient coding theory, originates primarily from bipolar cell synapses. Furthermore, the composite nonlinear computation performed by retinal circuitry corresponds to a boolean OR function applied to bipolar cell feature detectors. Our methods are statistically and computationally efficient, enabling us to rapidly learn hierarchical non-linear models as well as efficiently compute widely used descriptive statistics such as the spike triggered average (STA) and covariance (STC) for high dimensional stimuli. This general computational framework may aid in extracting principles of nonlinear hierarchical sensory processing across diverse modalities from limited data. Computation in neural circuits arises from the cascaded processing of inputs through multiple cell layers. Each of these cell layers performs operations such as filtering and thresholding in order to shape a circuit’s output. It remains a challenge to describe both the computations and the mechanisms that mediate them given limited data recorded from a neural circuit. A standard approach to describing circuit computation involves building quantitative encoding models that predict the circuit response given its input, but these often fail to map in an interpretable way onto mechanisms within the circuit. In this work, we build two layer linear-nonlinear cascade models (LN-LN) in order to describe how the retinal output is shaped by nonlinear mechanisms in the inner retina. We find that these LN-LN models, fit to ganglion cell recordings alone, identify filters and nonlinearities that are readily mapped onto individual circuit components inside the retina, namely bipolar cells and the bipolar-to-ganglion cell synaptic threshold. This work demonstrates how combining simple prior knowledge of circuit properties with partial experimental recordings of a neural circuit’s output can yield interpretable models of the entire circuit computation, including parts of the circuit that are hidden or not directly observed in neural recordings.
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Affiliation(s)
- Niru Maheswaranathan
- Neurosciences Graduate Program, Stanford University, Stanford, California, United States of America
| | - David B. Kastner
- Neurosciences Graduate Program, Stanford University, Stanford, California, United States of America
| | - Stephen A. Baccus
- Department of Neurobiology, Stanford University, Stanford, California, United States of America
| | - Surya Ganguli
- Department of Applied Physics, Stanford University, Stanford, California, United States of America
- * E-mail:
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Soto-Breceda A, Kameneva T, Meffin H, Maturana M, Ibbotson MR. Irregularly timed electrical pulses reduce adaptation of retinal ganglion cells. J Neural Eng 2018; 15:056017. [PMID: 30021932 DOI: 10.1088/1741-2552/aad46e] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
OBJECTIVE Retinal prostheses aim to provide visual percepts to blind people affected by diseases caused by photoreceptor degeneration. One of the main challenges presented by current devices is neural adaptation in the retina, which is believed to be the cause of fading-an effect where artificially produced percepts disappear over a short period of time, despite continuous stimulation of the retina. We aim to understand the neural adaptation generated in retinal ganglion cells (RGCs) during electrical stimulation. APPROACH Current visual prostheses use electrical pulses with fixed frequencies and amplitudes modulated over hundreds of milliseconds to stimulate the retina. However, in nature, neuronal spiking occurs with stochastic timing, hence the information received naturally from other neurons by RGCs is irregularly timed. We used a single epiretinal electrode to stimulate and compare rat RGC responses to stimulus trains of biphasic pulses delivered at regular and random inter-pulse intervals (IPI), the latter taken from an exponential distribution. MAIN RESULTS Our observations suggest that stimulation with random IPIs result in lower adaptation rates than stimulation with constant IPIs at frequencies of 50 Hz and 200 Hz. We also found a high proportion of lower amplitude action potentials, or spikelets. The spikelets were more prominent at high stimulation frequencies (50 Hz and 200 Hz) and were less susceptible to adaptation, but it was not clear if they propagated along the axon. SIGNIFICANCE Using random IPI stimulation in retinal prostheses reduces the decay of RGCs and this could potentially reduce fading of electrically induced visual perception.
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Affiliation(s)
- A Soto-Breceda
- National Vision Research Institute, Australian College of Optometry, Melbourne, Australia. Department of Biomedical Engineering, The University of Melbourne, Melbourne, Australia. CSIRO, Data 61, Melbourne, Australia
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Hassan O, Georgeson MA, Hammett ST. Brightening and Dimming Aftereffects at Low and High Luminance. Vision (Basel) 2018; 2:vision2020024. [PMID: 31735888 PMCID: PMC6835348 DOI: 10.3390/vision2020024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2018] [Revised: 06/06/2018] [Accepted: 06/11/2018] [Indexed: 11/16/2022] Open
Abstract
Adaptation to a spatially uniform field that increases or decreases in luminance over time yields a “ramp aftereffect”, whereby a steady, uniform luminance appears to dim or brighten, and an appropriate non-uniform test field appears to move. We measured the duration of this aftereffect of adaptation to ascending and descending luminance for a wide range of temporal frequencies and luminance amplitudes. Three types of luminance ramp profiles were used: linear, logarithmic, and exponential. The duration of the motion aftereffect increased as amplitude increased, regardless of the frequency, slope, or ramp profile of the adapting pattern. At low luminance, this result held for ascending luminance adaptation, but the duration of the aftereffect was significantly reduced for descending luminance adaptation. This reduction in the duration of the aftereffect at low luminance is consistent with differential recruitment of temporally tuned cells of the ON and OFF pathways, but the relative independence of the effect from temporal frequency is not.
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Affiliation(s)
- Omar Hassan
- Department of Psychology, Royal Holloway, University of London, Egham TW20 0EX, UK
| | - Mark A. Georgeson
- School of Life & Health Sciences, Aston University, Birmingham B4 7ET, UK
| | - Stephen T. Hammett
- Department of Psychology, Royal Holloway, University of London, Egham TW20 0EX, UK
- Correspondence: ; Tel.: +44-1784-443-3702
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Maturana MI, Apollo NV, Garrett DJ, Kameneva T, Cloherty SL, Grayden DB, Burkitt AN, Ibbotson MR, Meffin H. Electrical receptive fields of retinal ganglion cells: Influence of presynaptic neurons. PLoS Comput Biol 2018; 14:e1005997. [PMID: 29432411 DOI: 10.1371/journal.pcbi.1005997] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2017] [Revised: 02/23/2018] [Accepted: 01/24/2018] [Indexed: 11/26/2022] Open
Abstract
Implantable retinal stimulators activate surviving neurons to restore a sense of vision in people who have lost their photoreceptors through degenerative diseases. Complex spatial and temporal interactions occur in the retina during multi-electrode stimulation. Due to these complexities, most existing implants activate only a few electrodes at a time, limiting the repertoire of available stimulation patterns. Measuring the spatiotemporal interactions between electrodes and retinal cells, and incorporating them into a model may lead to improved stimulation algorithms that exploit the interactions. Here, we present a computational model that accurately predicts both the spatial and temporal nonlinear interactions of multi-electrode stimulation of rat retinal ganglion cells (RGCs). The model was verified using in vitro recordings of ON, OFF, and ON-OFF RGCs in response to subretinal multi-electrode stimulation with biphasic pulses at three stimulation frequencies (10, 20, 30 Hz). The model gives an estimate of each cell’s spatiotemporal electrical receptive fields (ERFs); i.e., the pattern of stimulation leading to excitation or suppression in the neuron. All cells had excitatory ERFs and many also had suppressive sub-regions of their ERFs. We show that the nonlinearities in observed responses arise largely from activation of presynaptic interneurons. When synaptic transmission was blocked, the number of sub-regions of the ERF was reduced, usually to a single excitatory ERF. This suggests that direct cell activation can be modeled accurately by a one-dimensional model with linear interactions between electrodes, whereas indirect stimulation due to summated presynaptic responses is nonlinear. Implantable neural stimulation devices are being widely used and clinically tested for the restoration of lost function (e.g. cochlear implants) and the treatment of neurological disorders. Smart devices that can combine sensing and stimulation will dramatically improve future patient outcomes. To this end, mathematical models that can accurately predict neural responses to electrical stimulation will be critical for the development of smart stimulation devices. Here, we demonstrate a model that predicts neural responses to simultaneous stimulation across multiple electrodes in the retina. We show that the activation of presynaptic neurons leads to nonlinearities in the responses of postsynaptic retinal ganglion cells. The model is accurate and is applicable to a wide range of neural stimulation devices.
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Khani MH, Gollisch T. Diversity in spatial scope of contrast adaptation among mouse retinal ganglion cells. J Neurophysiol 2017; 118:3024-3043. [PMID: 28904106 PMCID: PMC5712662 DOI: 10.1152/jn.00529.2017] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2017] [Revised: 09/07/2017] [Accepted: 09/07/2017] [Indexed: 02/05/2023] Open
Abstract
Retinal ganglion cells adapt to changes in visual contrast by adjusting their response kinetics and sensitivity. While much work has focused on the time scales of these adaptation processes, less is known about the spatial scale of contrast adaptation. For example, do small, localized contrast changes affect a cell's signal processing across its entire receptive field? Previous investigations have provided conflicting evidence, suggesting that contrast adaptation occurs either locally within subregions of a ganglion cell's receptive field or globally over the receptive field in its entirety. Here, we investigated the spatial extent of contrast adaptation in ganglion cells of the isolated mouse retina through multielectrode-array recordings. We applied visual stimuli so that ganglion cell receptive fields contained regions where the average contrast level changed periodically as well as regions with constant average contrast level. This allowed us to analyze temporal stimulus integration and sensitivity separately for stimulus regions with and without contrast changes. We found that the spatial scope of contrast adaptation depends strongly on cell identity, with some ganglion cells displaying clear local adaptation, whereas others, in particular large transient ganglion cells, adapted globally to contrast changes. Thus, the spatial scope of contrast adaptation in mouse retinal ganglion cells appears to be cell-type specific. This could reflect differences in mechanisms of contrast adaptation and may contribute to the functional diversity of different ganglion cell types.NEW & NOTEWORTHY Understanding whether adaptation of a neuron in a sensory system can occur locally inside the receptive field or whether it always globally affects the entire receptive field is important for understanding how the neuron processes complex sensory stimuli. For mouse retinal ganglion cells, we here show that both local and global contrast adaptation exist and that this diversity in spatial scope can contribute to the functional diversity of retinal ganglion cell types.
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Affiliation(s)
- Mohammad Hossein Khani
- University Medical Center Göttingen, Dept. of Ophthalmology and Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany; and.,International Max Planck Research School for Neuroscience, Göttingen, Germany
| | - Tim Gollisch
- University Medical Center Göttingen, Dept. of Ophthalmology and Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany; and
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Abstract
An animal’s ability to survive depends on its sensory systems being able to adapt to a wide range of environmental conditions, by maximizing the information extracted and reducing the noise transmitted. The visual system does this by adapting to luminance and contrast. While luminance adaptation can begin at the retinal photoreceptors, contrast adaptation has been shown to start at later stages in the retina. Photoreceptors adapt to changes in luminance over multiple time scales ranging from tens of milliseconds to minutes, with the adaptive changes arising from processes within the phototransduction cascade. Here we show a new form of adaptation in cones that is independent of the phototransduction process. Rather, it is mediated by voltage-gated ion channels in the cone membrane and acts by changing the frequency response of cones such that their responses speed up as the membrane potential modulation depth increases and slow down as the membrane potential modulation depth decreases. This mechanism is effectively activated by high-contrast stimuli dominated by low frequencies such as natural stimuli. However, the more generally used Gaussian white noise stimuli were not effective since they did not modulate the cone membrane potential to the same extent. This new adaptive process had a time constant of less than a second. A critical component of the underlying mechanism is the hyperpolarization-activated current, Ih, as pharmacologically blocking it prevented the long- and mid- wavelength sensitive cone photoreceptors (L- and M-cones) from adapting. Consistent with this, short- wavelength sensitive cone photoreceptors (S-cones) did not show the adaptive response, and we found they also lacked a prominent Ih. The adaptive filtering mechanism identified here improves the information flow by removing higher-frequency noise during lower signal-to-noise ratio conditions, as occurs when contrast levels are low. Although this new adaptive mechanism can be driven by contrast, it is not a contrast adaptation mechanism in its strictest sense, as will be argued in the Discussion. An animal’s ability to survive depends on its ability to adapt to a wide range of light conditions, by maximizing the information flow through the retina. Here, we show a new form of adaptation in cone photoreceptors that helps them optimize the information they transmit by adjusting their response kinetics to better match the visual conditions. The adaptive mechanism we describe is independent of the cone phototransduction process and is instead mediated by membrane processes in which the hyperpolarization-activated current, Ih, plays a critical role. Consistent with the critical role of this current, we also found that cones sensitive to short wavelengths lacked a prominent Ih current and did not show this new form of adaptation. As voltage-dependent processes underlie the adaptational mechanism, it is only apparent when the stimuli are able to sufficiently modulate the membrane potential of cones. This happens with natural stimuli, which are able to deliver high levels of “effective” contrast. However, even though this new adaptive mechanism can be driven by contrast, we argue in the Discussion that in its strictest sense it is not a contrast adaptation mechanism per se.
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22
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Real E, Asari H, Gollisch T, Meister M. Neural Circuit Inference from Function to Structure. Curr Biol 2017; 27:189-198. [PMID: 28065610 DOI: 10.1016/j.cub.2016.11.040] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2016] [Revised: 11/17/2016] [Accepted: 11/17/2016] [Indexed: 11/29/2022]
Abstract
Advances in technology are opening new windows on the structural connectivity and functional dynamics of brain circuits. Quantitative frameworks are needed that integrate these data from anatomy and physiology. Here, we present a modeling approach that creates such a link. The goal is to infer the structure of a neural circuit from sparse neural recordings, using partial knowledge of its anatomy as a regularizing constraint. We recorded visual responses from the output neurons of the retina, the ganglion cells. We then generated a systematic sequence of circuit models that represents retinal neurons and connections and fitted them to the experimental data. The optimal models faithfully recapitulated the ganglion cell outputs. More importantly, they made predictions about dynamics and connectivity among unobserved neurons internal to the circuit, and these were subsequently confirmed by experiment. This circuit inference framework promises to facilitate the integration and understanding of big data in neuroscience.
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Affiliation(s)
| | | | - Tim Gollisch
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen 37073, Germany
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23
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Cui Y, Wang YV, Park SJH, Demb JB, Butts DA. Divisive suppression explains high-precision firing and contrast adaptation in retinal ganglion cells. eLife 2016; 5:e19460. [PMID: 27841746 PMCID: PMC5108594 DOI: 10.7554/elife.19460] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2016] [Accepted: 10/19/2016] [Indexed: 11/13/2022] Open
Abstract
Visual processing depends on specific computations implemented by complex neural circuits. Here, we present a circuit-inspired model of retinal ganglion cell computation, targeted to explain their temporal dynamics and adaptation to contrast. To localize the sources of such processing, we used recordings at the levels of synaptic input and spiking output in the in vitro mouse retina. We found that an ON-Alpha ganglion cell's excitatory synaptic inputs were described by a divisive interaction between excitation and delayed suppression, which explained nonlinear processing that was already present in ganglion cell inputs. Ganglion cell output was further shaped by spike generation mechanisms. The full model accurately predicted spike responses with unprecedented millisecond precision, and accurately described contrast adaptation of the spike train. These results demonstrate how circuit and cell-intrinsic mechanisms interact for ganglion cell function and, more generally, illustrate the power of circuit-inspired modeling of sensory processing.
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Affiliation(s)
- Yuwei Cui
- Department of Biology, University of Maryland, College Park, United States
- Program in Neuroscience and Cognitive Science, University of Maryland, College Park, United States
| | - Yanbin V Wang
- Department of Ophthalmology and Visual Science, Yale University, New Haven, United States
- Department of Cellular and Molecular Physiology, Yale University, New Haven, United States
| | - Silvia J H Park
- Department of Ophthalmology and Visual Science, Yale University, New Haven, United States
| | - Jonathan B Demb
- Department of Ophthalmology and Visual Science, Yale University, New Haven, United States
- Department of Cellular and Molecular Physiology, Yale University, New Haven, United States
| | - Daniel A Butts
- Department of Biology, University of Maryland, College Park, United States
- Program in Neuroscience and Cognitive Science, University of Maryland, College Park, United States
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24
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Abstract
Computational simulations of the retina have led to valuable insights about the biophysics of its neuronal activity and processing principles. A great number of retina models have been proposed to reproduce the behavioral diversity of the different visual processing pathways. While many of these models share common computational stages, previous efforts have been more focused on fitting specific retina functions rather than generalizing them beyond a particular model. Here, we define a set of computational retinal microcircuits that can be used as basic building blocks for the modeling of different retina mechanisms. To validate the hypothesis that similar processing structures may be repeatedly found in different retina functions, we implemented a series of retina models simply by combining these computational retinal microcircuits. Accuracy of the retina models for capturing neural behavior was assessed by fitting published electrophysiological recordings that characterize some of the best-known phenomena observed in the retina: adaptation to the mean light intensity and temporal contrast, and differential motion sensitivity. The retinal microcircuits are part of a new software platform for efficient computational retina modeling from single-cell to large-scale levels. It includes an interface with spiking neural networks that allows simulation of the spiking response of ganglion cells and integration with models of higher visual areas.
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Affiliation(s)
- Pablo Martínez-Cañada
- Department of Computer Architecture and Technology, CITIC-UGR, University of Granada, Spain
| | - Christian Morillas
- Department of Computer Architecture and Technology, CITIC-UGR, University of Granada, Spain
| | - Begoña Pino
- Department of Computer Architecture and Technology, CITIC-UGR, University of Granada, Spain
| | - Eduardo Ros
- Department of Computer Architecture and Technology, CITIC-UGR, University of Granada, Spain
| | - Francisco Pelayo
- Department of Computer Architecture and Technology, CITIC-UGR, University of Granada, Spain
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25
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Abstract
Spontaneous activity patterns propagate through many parts of the developing nervous system and shape the wiring of emerging circuits. Prior to vision, waves of activity originating in the retina propagate through the lateral geniculate nucleus (LGN) of the thalamus to primary visual cortex (V1). Retinal waves have been shown to instruct the wiring of ganglion cell axons in LGN and of thalamocortical axons in V1 via correlation-based plasticity rules. Across species, retinal waves mature in three stereotypic stages (I-III), in which distinct circuit mechanisms give rise to unique activity patterns that serve specific functions in visual system refinement. Here, I review insights into the patterns, mechanisms, and functions of stage III retinal waves, which rely on glutamatergic signaling. As glutamatergic waves spread across the retina, neighboring ganglion cells with opposite light responses (ON vs. OFF) are activated sequentially. Recent studies identified lateral excitatory networks in the inner retina that generate and propagate glutamatergic waves, and vertical inhibitory networks that desynchronize the activity of ON and OFF cells in the wavefront. Stage III wave activity patterns may help segregate axons of ON and OFF ganglion cells in the LGN, and could contribute to the emergence of orientation selectivity in V1.
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Affiliation(s)
- Daniel Kerschensteiner
- Departments of Ophthalmology and Visual Sciences, Neuroscience, and Biomedical Engineering, Hope Center for Neurological Diseases, Washington University School of Medicine Saint Louis, MO, USA
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Abstract
The first synapses transmitting visual information contain an unusual organelle, the ribbon, which is involved in the transport and priming of vesicles to be released at the active zone. The ribbon is one of many design features that allow efficient refilling of the active zone, which in turn enables graded changes in membrane potential to be transmitted using a continuous mode of neurotransmitter release. The ribbon also plays a key role in supplying vesicles for rapid and transient bursts of release that signal fast changes, such as the onset of light. We increasingly understand how the physiological properties of ribbon synapses determine basic transformations of the visual signal and, in particular, how the process of refilling the active zone regulates the gain and adaptive properties of the retinal circuit. The molecular basis of ribbon function is, however, far from clear.
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Affiliation(s)
- Leon Lagnado
- School of Life Sciences, University of Sussex, Brighton BN1 9QG, United Kingdom;
| | - Frank Schmitz
- Department of Neuroanatomy, Institute for Anatomy and Cell Biology, Medical School Saarland University, Homburg/Saar, Germany;
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Valtcheva TM, Passaglia CL. Contrast adaptation in the Limulus lateral eye. J Neurophysiol 2015; 114:3234-41. [PMID: 26445869 DOI: 10.1152/jn.00593.2015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2015] [Accepted: 09/30/2015] [Indexed: 11/22/2022] Open
Abstract
Luminance and contrast adaptation are neuronal mechanisms employed by the visual system to adjust our sensitivity to light. They are mediated by an assortment of cellular and network processes distributed across the retina and visual cortex. Both have been demonstrated in the eyes of many vertebrates, but only luminance adaptation has been shown in invertebrate eyes to date. Since the computational benefits of contrast adaptation should apply to all visual systems, we investigated whether this mechanism operates in horseshoe crab eyes, one of the best-understood neural networks in the animal kingdom. The spike trains of optic nerve fibers were recorded in response to light stimuli modulated randomly in time and delivered to single ommatidia or the whole eye. We found that the retina adapts to both the mean luminance and contrast of a white-noise stimulus, that luminance- and contrast-adaptive processes are largely independent, and that they originate within an ommatidium. Network interactions are not involved. A published computer model that simulates existing knowledge of the horseshoe crab eye did not show contrast adaptation, suggesting that a heretofore unknown mechanism may underlie the phenomenon. This mechanism does not appear to reside in photoreceptors because white-noise analysis of electroretinogram recordings did not show contrast adaptation. The likely site of origin is therefore the spike discharge mechanism of optic nerve fibers. The finding of contrast adaption in a retinal network as simple as the horseshoe crab eye underscores the broader importance of this image processing strategy to vision.
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Affiliation(s)
- Tchoudomira M Valtcheva
- Department of Chemical and Biomedical Engineering, University of South Florida, Tampa, Florida; and
| | - Christopher L Passaglia
- Department of Chemical and Biomedical Engineering, University of South Florida, Tampa, Florida; and Department of Ophthalmology, University of South Florida, Tampa, Florida
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Liu JK, Gollisch T. Spike-Triggered Covariance Analysis Reveals Phenomenological Diversity of Contrast Adaptation in the Retina. PLoS Comput Biol 2015; 11:e1004425. [PMID: 26230927 PMCID: PMC4521887 DOI: 10.1371/journal.pcbi.1004425] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2015] [Accepted: 07/03/2015] [Indexed: 11/25/2022] Open
Abstract
When visual contrast changes, retinal ganglion cells adapt by adjusting their sensitivity as well as their temporal filtering characteristics. The latter has classically been described by contrast-induced gain changes that depend on temporal frequency. Here, we explored a new perspective on contrast-induced changes in temporal filtering by using spike-triggered covariance analysis to extract multiple parallel temporal filters for individual ganglion cells. Based on multielectrode-array recordings from ganglion cells in the isolated salamander retina, we found that contrast adaptation of temporal filtering can largely be captured by contrast-invariant sets of filters with contrast-dependent weights. Moreover, differences among the ganglion cells in the filter sets and their contrast-dependent contributions allowed us to phenomenologically distinguish three types of filter changes. The first type is characterized by newly emerging features at higher contrast, which can be reproduced by computational models that contain response-triggered gain-control mechanisms. The second type follows from stronger adaptation in the Off pathway as compared to the On pathway in On-Off-type ganglion cells. Finally, we found that, in a subset of neurons, contrast-induced filter changes are governed by particularly strong spike-timing dynamics, in particular by pronounced stimulus-dependent latency shifts that can be observed in these cells. Together, our results show that the contrast dependence of temporal filtering in retinal ganglion cells has a multifaceted phenomenology and that a multi-filter analysis can provide a useful basis for capturing the underlying signal-processing dynamics. Our sensory systems have to process stimuli under a wide range of environmental conditions. To cope with this challenge, the involved neurons adapt by adjusting their signal processing to the recently encountered intensity range. In the visual system, one finds, for example, that higher visual contrast leads to changes in how visual signals are temporally filtered, making signal processing faster and more band-pass-like at higher contrast. By analyzing signals from neurons in the retina of salamanders, we here found that these adaptation effects can be described by a fixed set of filters, independent of contrast, whose relative contributions change with contrast. Also, we found that different phenomena contribute to this adaptation. In particular, some cells change their relative sensitivity to light increments and light decrements, whereas other cells are influenced by a strong contrast-dependence of the exact timing of their responses. Our results show that contrast adaptation in the retina is not an entirely homogeneous phenomenon, and that models with multiple filters can help in characterizing sensory adaptation.
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Affiliation(s)
- Jian K. Liu
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany
| | - Tim Gollisch
- Department of Ophthalmology, University Medical Center Göttingen, Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany
- * E-mail:
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Fujiwara T, Kazawa T, Sakurai T, Fukushima R, Uchino K, Yamagata T, Namiki S, Haupt SS, Kanzaki R. Odorant concentration differentiator for intermittent olfactory signals. J Neurosci 2014; 34:16581-93. [PMID: 25505311 DOI: 10.1523/JNEUROSCI.2319-14.2014] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Animals need to discriminate differences in spatiotemporally distributed sensory signals in terms of quality as well as quantity for generating adaptive behavior. Olfactory signals characterized by odor identity and concentration are intermittently distributed in the environment. From these intervals of stimulation, animals process odorant concentration to localize partners or food sources. Although concentration-response characteristics in olfactory neurons have traditionally been investigated using single stimulus pulses, their behavior under intermittent stimulus regimens remains largely elusive. Using the silkmoth (Bombyx mori) pheromone processing system, a simple and behaviorally well-defined model for olfaction, we investigated the neuronal representation of odorant concentration upon intermittent stimulation in the naturally occurring range. To the first stimulus in a series, the responses of antennal lobe (AL) projection neurons (PNs) showed a concentration dependence as previously shown in many olfactory systems. However, PN response amplitudes dynamically changed upon exposure to intermittent stimuli of the same odorant concentration and settled to a constant, largely concentration-independent level. As a result, PN responses emphasized odorant concentration changes rather than encoding absolute concentration in pulse trains of stimuli. Olfactory receptor neurons did not contribute to this response transformation which was due to long-lasting inhibition affecting PNs in the AL. Simulations confirmed that inhibition also provides advantages when stimuli have naturalistic properties. The primary olfactory center thus functions as an odorant concentration differentiator to efficiently detect concentration changes, thereby improving odorant source orientation over a wide concentration range.
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Martínez-Cañada P, Morillas C, Pino B, Pelayo F. Towards a Generic Simulation Tool of Retina Models. Artificial Computation in Biology and Medicine 2015. [DOI: 10.1007/978-3-319-18914-7_6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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Baden T, Nikolaev A, Esposti F, Dreosti E, Odermatt B, Lagnado L. A synaptic mechanism for temporal filtering of visual signals. PLoS Biol 2014; 12:e1001972. [PMID: 25333637 DOI: 10.1371/journal.pbio.1001972] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2014] [Accepted: 09/10/2014] [Indexed: 12/22/2022] Open
Abstract
The visual system transmits information about fast and slow changes in light intensity through separate neural pathways. We used in vivo imaging to investigate how bipolar cells transmit these signals to the inner retina. We found that the volume of the synaptic terminal is an intrinsic property that contributes to different temporal filters. Individual cells transmit through multiple terminals varying in size, but smaller terminals generate faster and larger calcium transients to trigger vesicle release with higher initial gain, followed by more profound adaptation. Smaller terminals transmitted higher stimulus frequencies more effectively. Modeling global calcium dynamics triggering vesicle release indicated that variations in the volume of presynaptic compartments contribute directly to all these differences in response dynamics. These results indicate how one neuron can transmit different temporal components in the visual signal through synaptic terminals of varying geometries with different adaptational properties.
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Abstract
How an object is perceived depends on the temporal context in which it is encountered. Sensory signals in the brain also depend on temporal context, a phenomenon often referred to as adaptation. Traditional descriptions of adaptation effects emphasize various forms of response fatigue in single neurons, which grow in strength with exposure to a stimulus. Recent work on vision, and other sensory modalities, has shown that this description has substantial shortcomings. Here we review our emerging understanding of how adaptation alters the balance between excitatory and suppressive signals, how effects depend on adaptation duration, and how adaptation influences representations that are distributed within and across multiple brain structures. This work points to a sophisticated set of mechanisms for adjusting to recent sensory experience, and suggests new avenues for understanding their function.
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Affiliation(s)
- Samuel G Solomon
- Institute for Behavioural Neuroscience, University College London, London, UK; Department of Experimental Psychology, University College London, London, UK.
| | - Adam Kohn
- Dominick Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA; Department of Ophthalmology and Visual Sciences, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
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Vlasits AL, Bos R, Morrie RD, Fortuny C, Flannery JG, Feller MB, Rivlin-Etzion M. Visual stimulation switches the polarity of excitatory input to starburst amacrine cells. Neuron 2014; 83:1172-84. [PMID: 25155960 PMCID: PMC4161675 DOI: 10.1016/j.neuron.2014.07.037] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/18/2014] [Indexed: 11/22/2022]
Abstract
Direction-selective ganglion cells (DSGCs) are tuned to motion in one direction. Starburst amacrine cells (SACs) are thought to mediate this direction selectivity through precise anatomical wiring to DSGCs. Nevertheless, we previously found that visual adaptation can reverse DSGCs's directional tuning, overcoming the circuit anatomy. Here we explore the role of SACs in the generation and adaptation of direction selectivity. First, using pharmacogenetics and two-photon calcium imaging, we validate that SACs are necessary for direction selectivity. Next, we demonstrate that exposure to an adaptive stimulus dramatically alters SACs' synaptic inputs. Specifically, after visual adaptation, On-SACs lose their excitatory input during light onset but gain an excitatory input during light offset. Our data suggest that visual stimulation alters the interactions between rod- and cone-mediated inputs that converge on the terminals of On-cone BCs. These results demonstrate how the sensory environment can modify computations performed by anatomically defined neuronal circuits.
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Affiliation(s)
- Anna L Vlasits
- Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94720, USA
| | - Rémi Bos
- Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA
| | - Ryan D Morrie
- Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA
| | - Cécile Fortuny
- Vision Science Graduate Program, University of California, Berkeley, Berkeley, CA 94720, USA
| | - John G Flannery
- Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Vision Science Graduate Program, University of California, Berkeley, Berkeley, CA 94720, USA
| | - Marla B Feller
- Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
| | - Michal Rivlin-Etzion
- Department of Neurobiology, Weizmann Institute of Science, Rehovot, 76100, Israel.
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34
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Abstract
Throughout different sensory systems, individual neurons integrate incoming signals over their receptive fields. The characteristics of this signal integration are crucial determinants for the neurons' functions. For ganglion cells in the vertebrate retina, receptive fields are characterized by the well-known center-surround structure and, although several studies have addressed spatial integration in the receptive field center, little is known about how visual signals are integrated in the surround. Therefore, we set out here to characterize signal integration and to identify relevant nonlinearities in the receptive field surround of ganglion cells in the isolated salamander retina by recording spiking activity with extracellular electrodes under visual stimulation of the center and surround. To quantify nonlinearities of spatial integration independently of subsequent nonlinearities of spike generation, we applied the technique of iso-response measurements as follows: using closed-loop experiments, we searched for different stimulus patterns in the surround that all reduced the center-evoked spiking activity by the same amount. The identified iso-response stimuli revealed strongly nonlinear spatial integration in the receptive field surrounds of all recorded cells. Furthermore, cell types that had been shown previously to have different nonlinearities in receptive field centers showed similar surround nonlinearities but differed systematically in the adaptive characteristics of the surround. Finally, we found that there is an optimal spatial scale of surround suppression; suppression was most effective when surround stimulation was organized into subregions of several hundred micrometers in diameter, indicating that the surround is composed of subunits that have strong center-surround organization themselves.
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35
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36
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Abstract
Components of neural circuits are often repurposed so that the same biological hardware can be used for distinct computations. This flexibility in circuit operation is required to account for the changes in sensory computations that accompany changes in input signals. Yet we know little about how such changes in circuit operation are implemented. Here we show that a single retinal ganglion cell performs a different computation in dim light--averaging contrast within its receptive field--than in brighter light, when the cell becomes sensitive to fine spatial detail. This computational change depends on interactions between two parallel circuits that control the ganglion cell's excitatory synaptic inputs. Specifically, steady-state interactions through dendro-axonal gap junctions control rectification of the synapses providing excitatory input to the ganglion cell. These findings provide a clear example of how a simple synaptic mechanism can repurpose a neural circuit to perform diverse computations.
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Affiliation(s)
- William N Grimes
- Department of Physiology and Biophysics and Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA
| | - Gregory W Schwartz
- Department of Physiology and Biophysics and Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA
| | - Fred Rieke
- Department of Physiology and Biophysics and Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA.
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37
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Kastner DB, Baccus SA. Insights from the retina into the diverse and general computations of adaptation, detection, and prediction. Curr Opin Neurobiol 2014; 25:63-9. [DOI: 10.1016/j.conb.2013.11.012] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2013] [Revised: 11/24/2013] [Accepted: 11/28/2013] [Indexed: 01/26/2023]
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38
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Akimov NP, Rentería RC. Dark rearing alters the normal development of spatiotemporal response properties but not of contrast detection threshold in mouse retinal ganglion cells. Dev Neurobiol 2014; 74:692-706. [PMID: 24408883 DOI: 10.1002/dneu.22164] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2013] [Revised: 12/20/2013] [Accepted: 01/06/2014] [Indexed: 12/27/2022]
Abstract
The mouse visual system is immature when the eyes open two weeks after birth. As in other mammals, some of the maturation that occurs in the subsequent weeks is known to depend on visual experience. Development of the retina, which as the first stage of vision provides the visual information to the brain, also depends on light-driven activity for proper development but has been less well studied than visual cortical development. The critical properties for retinal encoding of images include detection of contrast and responsiveness to the broad range of temporal stimulus frequencies present in natural stimuli. Here we show that contrast detection threshold and temporal frequency response characteristics of ON and OFF retinal ganglion cells (RGCs), which are poor at eye opening, subsequently undergo maturation, improving RGC performance. Further, we find that depriving mice of visual experience from before birth by rearing them in the dark causes ON and OFF RGCs to have smaller receptive field centers but does not affect their contrast detection threshold development. The modest developmental increase in temporal frequency responsiveness of RGCs in mice reared on a normal light cycle was inhibited by dark rearing only in ON but not OFF RGCs. Thus, these RGC response characteristics are in many ways unaffected by the experience-dependent changes to synaptic and spontaneous activity known to occur in the mouse retina in the two weeks after eye opening, but specific differences are apparent in the ON vs. OFF RGC populations.
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Affiliation(s)
- Nikolay P Akimov
- Department of Physiology, The University of Texas Health Science Center at San Antonio, San Antonio, Texas, 78229
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39
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Chen Z, Song Y, Yao J, Weng C, Yin ZQ. Alterations of sodium and potassium channels of RGCs in RCS rat with the development of retinal degeneration. J Mol Neurosci 2013; 51:976-85. [PMID: 23934450 DOI: 10.1007/s12031-013-0082-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2013] [Accepted: 07/22/2013] [Indexed: 11/28/2022]
Abstract
All know that retinitis pigmentosa (RP) is a group of hereditary retinal degenerative diseases characterized by progressive dysfunction of photoreceptors and associated with progressive cells loss; nevertheless, little is known about how rods and cones loss affects the surviving inner retinal neurons and networks. Retinal ganglion cells (RGCs) process and convey visual information from retina to visual centers in the brain. The healthy various ion channels determine the normal reception and projection of visual signals from RGCs. Previous work on the Royal College of Surgeons (RCS) rat, as a kind of classical RP animal model, indicated that, at late stages of retinal degeneration in RCS rat, RGCs were also morphologically and functionally affected. Here, retrograde labeling for RGCs with Fluorogold was performed to investigate the distribution, density, and morphological changes of RGCs during retinal degeneration. Then, patch clamp recording, western blot, and immunofluorescence staining were performed to study the channels of sodium and potassium properties of RGCs, so as to explore the molecular and proteinic basis for understanding the alterations of RGCs membrane properties and firing functions. We found that the resting membrane potential, input resistance, and capacitance of RGCs changed significantly at the late stage of retinal degeneration. Action potential could not be evoked in a part of RGCs. Inward sodium current and outward potassium current recording showed that sodium current was impaired severely but only slightly in potassium current. Expressions of sodium channel protein were impaired dramatically at the late stage of retinal degeneration. The results suggested that the density of RGCs decreased, process ramification impaired, and sodium ion channel proteins destructed, which led to the impairment of electrophysiological functions of RGCs and eventually resulted in the loss of visual function.
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Affiliation(s)
- Zhongshan Chen
- Southwest Hospital, Southwest Eye Hospital, Third Military Medical University, Chongqing, 400038, China
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40
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Abstract
Sensory systems change their sensitivity based on recent stimuli to adjust their response range to the range of inputs and to predict future sensory input. Here, we report the presence of retinal ganglion cells that have antagonistic plasticity, showing central adaptation and peripheral sensitization. Ganglion cell responses were captured by a spatiotemporal model with independently adapting excitatory and inhibitory subunits, and sensitization requires GABAergic inhibition. Using a simple theory of signal detection, we show that the sensitizing surround conforms to an optimal inference model that continually updates the prior signal probability. This indicates that small receptive field regions have dual functionality--to adapt to the local range of signals but sensitize based upon the probability of the presence of that signal. Within this framework, we show that sensitization predicts the location of a nearby object, revealing prediction as a functional role for adapting inhibition in the nervous system.
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Affiliation(s)
- David B. Kastner
- Neuroscience Program, Stanford University School of Medicine, 299 Campus Drive W., Stanford, CA, USA
| | - Stephen A. Baccus
- Department of Neurobiology, Stanford University School of Medicine, 299 Campus Drive W., Stanford, CA, USA
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41
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Marco SD, Protti DA, Solomon SG. Excitatory and inhibitory contributions to receptive fields of alpha-like retinal ganglion cells in mouse. J Neurophysiol 2013; 110:1426-40. [PMID: 23843429 DOI: 10.1152/jn.01097.2012] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
The ON and OFF pathways that emerge at the first synapse in the retina are generally thought to be streamed in parallel to higher visual areas, but recent work shows cross talk at the level of retinal ganglion cells. The ON pathway drives inhibitory inputs onto some OFF ganglion cells, such that these neurons show "push-pull" convergence of OFF-excitation and ON-disinhibition. In this study we measure the spatial receptive field of excitatory and inhibitory inputs to OFF-sustained (OFF-S) retinal ganglion cells of mouse, establish how contrast adaptation modulates excitatory and inhibitory synaptic inputs, and show the pharmacology of the inhibitory inputs. We find that the spatial tuning properties of excitatory and inhibitory inputs are sufficient to determine the spatial profile of the spike output and that high spatial acuity may be particularly reliant on disinhibitory circuits. Contrast adaptation reduced excitation to OFF-S ganglion cells, as expected, and also unmasked an asymmetry in inhibitory inputs: disinhibition at light-off was immune to contrast adaptation, but inhibition at light-on was substantially reduced. In pharmacological experiments we confirm that inhibitory inputs are partly mediated by glycine, but our measurements also suggest a substantial role for GABA. Our observations therefore reveal functional diversity in the inhibitory inputs to OFF ganglion cells and suggest that in addition to enhancing operational range these inputs help shape the spatial receptive fields of ganglion cells.
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Affiliation(s)
- Stefano Di Marco
- ARC Centre of Excellence in Vision Science, The University of Sydney, Sydney, Australia
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42
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Nikolaev A, Leung KM, Odermatt B, Lagnado L. Synaptic mechanisms of adaptation and sensitization in the retina. Nat Neurosci 2013; 16:934-41. [PMID: 23685718 DOI: 10.1038/nn.3408] [Citation(s) in RCA: 60] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2013] [Accepted: 04/24/2013] [Indexed: 12/30/2022]
Abstract
Sensory systems continually adjust the way stimuli are processed. What are the circuit mechanisms underlying this plasticity? We investigated how synapses in the retina of zebrafish adjust to changes in the temporal contrast of a visual stimulus by imaging activity in vivo. Following an increase in contrast, bipolar cell synapses with strong initial responses depressed, whereas synapses with weak initial responses facilitated. Depression and facilitation predominated in different strata of the inner retina, where bipolar cell output was anticorrelated with the activity of amacrine cell synapses providing inhibitory feedback. Pharmacological block of GABAergic feedback converted facilitating bipolar cell synapses into depressing ones. These results indicate that depression intrinsic to bipolar cell synapses causes adaptation of the ganglion cell response to contrast, whereas depression in amacrine cell synapses causes sensitization. Distinct microcircuits segregating to different layers of the retina can cause simultaneous increases or decreases in the gain of neural responses.
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Affiliation(s)
- Anton Nikolaev
- Medical Research Council Laboratory of Molecular Biology, Cambridge, UK
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43
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Abstract
Retinal ganglion cells react to changes in visual contrast by adjusting their sensitivity and temporal filtering characteristics. This contrast adaptation has primarily been studied under spatially homogeneous stimulation. Yet, ganglion cell receptive fields are often characterized by spatial subfields, providing a substrate for nonlinear spatial processing. This raises the question whether contrast adaptation follows a similar subfield structure or whether it occurs globally over the receptive field even for local stimulation. We therefore recorded ganglion cell activity in isolated salamander retinas while locally changing visual contrast. Ganglion cells showed primarily global adaptation characteristics, with notable exceptions in certain aspects of temporal filtering. Surprisingly, some changes in filtering were most pronounced for locations where contrast did not change. This seemingly paradoxical effect can be explained by a simple computational model, which emphasizes the importance of local nonlinearities in the retina and suggests a reevaluation of previously reported local contrast adaptation.
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Affiliation(s)
- Mona M Garvert
- Visual Coding Group, Max Planck Institute of Neurobiology, 82152 Martinsried, Germany
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44
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Abstract
Sensory cortex is able to encode a broad range of stimulus features despite a great variation in signal strength. In cat primary visual cortex (V1), for example, neurons are able to extract stimulus features like orientation or spatial configuration over a wide range of stimulus contrasts. The contrast-invariant spatial tuning found in V1 neuron responses has been modeled as a gain control mechanism, but at which stage of the visual pathway it emerges has remained unclear. Here we describe our findings that contrast-invariant spatial tuning occurs not only in the responses of lateral geniculate nucleus (LGN) relay cells but also in their afferent retinal input. Our evidence suggests that a similar contrast-invariant mechanism is found throughout the stages of the early visual pathway, and that the contrast-invariant spatial selectivity is evident in both retinal ganglion cell and LGN cell responses.
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45
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Abstract
Amacrine cells represent the most diverse class of retinal neuron, comprising dozens of distinct cell types. Each type exhibits a unique morphology and generates specific visual computations through its synapses with a subset of excitatory interneurons (bipolar cells), other amacrine cells, and output neurons (ganglion cells). Here, we review the intrinsic and network properties that underlie the function of the most common amacrine cell in the mammalian retina, the AII amacrine cell. The AII connects rod and cone photoreceptor pathways, forming an essential link in the circuit for rod-mediated (scotopic) vision. As such, the AII has become known as the rod-amacrine cell. We, however, now understand that AII function extends to cone-mediated (photopic) vision, and AII function in scotopic and photopic conditions utilizes the same underlying circuit: AIIs are electrically coupled to each other and to the terminals of some types of ON cone bipolar cells. The direction of signal flow, however, varies with illumination. Under photopic conditions, the AII network constitutes a crossover inhibition pathway that allows ON signals to inhibit OFF ganglion cells and contributes to motion sensitivity in certain ganglion cell types. We discuss how the AII's combination of intrinsic and network properties accounts for its unique role in visual processing.
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46
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Abstract
In multiple sensory systems, adaptation to the variance of a sensory input changes the sensitivity, kinetics, and average response over timescales ranging from < 100 ms to tens of seconds. Here, we present a simple, biophysically relevant model of retinal contrast adaptation that accurately captures both the membrane potential response and all adaptive properties. The adaptive component of this model is a first-order kinetic process of the type used to describe ion channel gating and synaptic transmission. From the model, we conclude that all adaptive dynamics can be accounted for by depletion of a signaling mechanism, and that variance adaptation can be explained as adaptation to the mean of a rectified signal. The model parameters show strong similarity to known properties of bipolar cell synaptic vesicle pools. Diverse types of adaptive properties that implement theoretical principles of efficient coding can be generated by a single type of molecule or synapse with just a few microscopic states.
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Affiliation(s)
- Yusuf Ozuysal
- Department of Electrical Engineering, Stanford University, Stanford, CA 94305, USA
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47
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Radonjić A, Allred SR, Gilchrist AL, Brainard DH. The dynamic range of human lightness perception. Curr Biol 2011; 21:1931-6. [PMID: 22079116 DOI: 10.1016/j.cub.2011.10.013] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2011] [Revised: 10/10/2011] [Accepted: 10/11/2011] [Indexed: 11/29/2022]
Abstract
Natural viewing challenges the visual system with images that have a dynamic range of light intensity (luminance) that can approach 1,000,000:1 and that often exceeds 10,000:1 [1, 2]. The range of perceived surface reflectance (lightness), however, can be well approximated by the Munsell matte neutral scale (N 2.0/ to N 9.5/), consisting of surfaces whose reflectance varies by about 30:1. Thus, the visual system must map a large range of surface luminance onto a much smaller range of surface lightness. We measured this mapping in images with a dynamic range close to that of natural images. We studied simple images that lacked segmentation cues that would indicate multiple regions of illumination. We found a remarkable degree of compression: at a single image location, a stimulus luminance range of 5,905:1 can be mapped onto an extended lightness scale that has a reflectance range of 100:1. We characterized how the luminance-to-lightness mapping changes with stimulus context. Our data rule out theories that predict perceived lightness from luminance ratios or Weber contrast. A mechanistic model connects our data to theories of adaptation and provides insight about how the underlying visual response varies with context.
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Affiliation(s)
- Ana Radonjić
- Department of Psychology, University of Pennsylvania, Philadelphia, PA 19104, USA.
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48
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Jarsky T, Cembrowski M, Logan SM, Kath WL, Riecke H, Demb JB, Singer JH. A synaptic mechanism for retinal adaptation to luminance and contrast. J Neurosci 2011; 31:11003-15. [PMID: 21795549 DOI: 10.1523/JNEUROSCI.2631-11.2011] [Citation(s) in RCA: 97] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The gain of signaling in primary sensory circuits is matched to the stimulus intensity by the process of adaptation. Retinal neural circuits adapt to visual scene statistics, including the mean (background adaptation) and the temporal variance (contrast adaptation) of the light stimulus. The intrinsic properties of retinal bipolar cells and synapses contribute to background and contrast adaptation, but it is unclear whether both forms of adaptation depend on the same cellular mechanisms. Studies of bipolar cell synapses identified synaptic mechanisms of gain control, but the relevance of these mechanisms to visual processing is uncertain because of the historical focus on fast, phasic transmission rather than the tonic transmission evoked by ambient light. Here, we studied use-dependent regulation of bipolar cell synaptic transmission evoked by small, ongoing modulations of membrane potential (V(M)) in the physiological range. We made paired whole-cell recordings from rod bipolar (RB) and AII amacrine cells in a mouse retinal slice preparation. Quasi-white noise voltage commands modulated RB V(M) and evoked EPSCs in the AII. We mimicked changes in background luminance or contrast, respectively, by depolarizing the V(M) or increasing its variance. A linear systems analysis of synaptic transmission showed that increasing either the mean or the variance of the presynaptic V(M) reduced gain. Further electrophysiological and computational analyses demonstrated that adaptation to mean potential resulted from both Ca channel inactivation and vesicle depletion, whereas adaptation to variance resulted from vesicle depletion alone. Thus, background and contrast adaptation apparently depend in part on a common synaptic mechanism.
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49
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Abstract
Retinal ganglion cells adapt by reducing their sensitivity during periods of high contrast. Contrast adaptation in the firing response depends on both presynaptic and intrinsic mechanisms. Here, we investigated intrinsic mechanisms for contrast adaptation in OFF Alpha ganglion cells in the in vitro guinea pig retina. Using either visual stimulation or current injection, we show that brief depolarization evoked spiking and suppressed firing during subsequent depolarization. The suppression could be explained by Na channel inactivation, as shown in salamander cells. However, brief hyperpolarization in the physiological range (5-10 mV) also suppressed firing during subsequent depolarization. This suppression was selectively sensitive to blockers of delayed-rectifier K channels (K(DR)). In somatic membrane patches, we observed tetraethylammonium-sensitive K(DR) currents that activated near -25 mV. Recovery from inactivation occurred at potentials hyperpolarized to V(rest). Brief periods of hyperpolarization apparently remove K(DR) inactivation and thereby increase the channel pool available to suppress excitability during subsequent depolarization.
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Affiliation(s)
- Michael Weick
- Department of Ophthalmology and Visual Sciences, Kellogg Eye Center, University of Michigan, 1000 Wall Street, Ann Arbor, MI 48105, USA
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50
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Abstract
The range of natural inputs encoded by a neuron often exceeds its dynamic range. To overcome this limitation, neural populations divide their inputs among different cell classes, as with rod and cone photoreceptors, and adapt by shifting their dynamic range. We report that the dynamic behavior of retinal ganglion cells in salamanders, mice and rabbits is divided into two opposing forms of short-term plasticity in different cell classes. One population of cells exhibited sensitization-a persistent elevated sensitivity following a strong stimulus. This newly observed dynamic behavior compensates for the information loss caused by the known process of adaptation occurring in a separate cell population. The two populations divide the dynamic range of inputs, with sensitizing cells encoding weak signals and adapting cells encoding strong signals. In the two populations, the linear, threshold and adaptive properties are linked to preserve responsiveness when stimulus statistics change, with one population maintaining the ability to respond when the other fails.
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Affiliation(s)
- David B Kastner
- Neuroscience Program, Stanford University School of Medicine, Stanford, California, USA
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