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Bru JL, Kasallis SJ, Zhuo Q, Høyland-Kroghsbo NM, Siryaporn A. Swarming of P. aeruginosa: Through the lens of biophysics. Biophys Rev (Melville) 2023; 4:031305. [PMID: 37781002 PMCID: PMC10540860 DOI: 10.1063/5.0128140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Accepted: 08/29/2023] [Indexed: 10/03/2023]
Abstract
Swarming is a collective flagella-dependent movement of bacteria across a surface that is observed across many species of bacteria. Due to the prevalence and diversity of this motility modality, multiple models of swarming have been proposed, but a consensus on a general mechanism for swarming is still lacking. Here, we focus on swarming by Pseudomonas aeruginosa due to the abundance of experimental data and multiple models for this species, including interpretations that are rooted in biology and biophysics. In this review, we address three outstanding questions about P. aeruginosa swarming: what drives the outward expansion of a swarm, what causes the formation of dendritic patterns (tendrils), and what are the roles of flagella? We review models that propose biologically active mechanisms including surfactant sensing as well as fluid mechanics-based models that consider swarms as thin liquid films. Finally, we reconcile recent observations of P. aeruginosa swarms with early definitions of swarming. This analysis suggests that mechanisms associated with sliding motility have a critical role in P. aeruginosa swarm formation.
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Affiliation(s)
- Jean-Louis Bru
- Department of Molecular Biology and Biochemistry, University of California Irvine, Irvine, California 92697, USA
| | - Summer J. Kasallis
- Department of Physics and Astronomy, University of California Irvine, Irvine, California 92697, USA
| | - Quantum Zhuo
- Department of Physics and Astronomy, University of California Irvine, Irvine, California 92697, USA
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Li JY, Wang L, Liu YF, Zhou L, Gang HZ, Liu JF, Yang SZ, Mu BZ. Microbial Lipopeptide-Producing Strains and Their Metabolic Roles under Anaerobic Conditions. Microorganisms 2021; 9:2030. [PMID: 34683351 DOI: 10.3390/microorganisms9102030] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2021] [Revised: 09/09/2021] [Accepted: 09/10/2021] [Indexed: 01/17/2023] Open
Abstract
The lipopeptide produced by microorganisms is one of the representative biosurfactants and is characterized as a series of structural analogues of different families. Thirty-four families covering about 300 lipopeptide compounds have been reported in the last decades, and most of the reported lipopeptides produced by microorganisms were under aerobic conditions. The lipopeptide-producing strains under anaerobic conditions have attracted much attention from both the academic and industrial communities, due to the needs and the challenge of their applications in anaerobic environments, such as in oil reservoirs and in microbial enhanced oil recovery (MEOR). In this review, the fifty-eight reported bacterial strains, mostly isolated from oil reservoirs and dominated by the species Bacillus subtilis, producing lipopeptide biosurfactants, and the species Pseudomonas aeruginosa, producing glycolipid biosurfactants under anaerobic conditions were summarized. The metabolic pathway and the non-ribosomal peptide synthetases (NRPSs) of the strain Bacillus subtilis under anaerobic conditions were analyzed, which is expected to better understand the key mechanisms of the growth and production of lipopeptide biosurfactants of such kind of bacteria under anaerobic conditions, and to expand the industrial application of anaerobic biosurfactant-producing bacteria.
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Zhang K, Tao W, Lin J, Wang W, Li S. Production of the biosurfactant serrawettin W1 by Serratia marcescens S-1 improves hydrocarbon degradation. Bioprocess Biosyst Eng 2021; 44:2541-52. [PMID: 34514513 DOI: 10.1007/s00449-021-02625-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Accepted: 08/12/2021] [Indexed: 10/20/2022]
Abstract
With the frequent occurrence of oil spills, the bioremediation of petroleum hydrocarbons pollution has attracted more and more attention. In this study, we investigated the biodegradation of crude oil by the biosurfactant-producing strain S-1. The strain was isolated from petroleum-contaminated soil and identified as Serratia marcescens according to partial 16S rDNA gene analysis. It was able to effectively degrade hydrocarbons with the concomitant production of biosurfactants at 20-30 °C, while there was no biosurfactant production and the degradation rate was lower at 37 °C. The biosurfactant was identified as serrawettin W1 by UPLC-ESI-MS, and was found to reduce the surface tension of water to 30 mN/m, with stable surface activity and emulsion activity at temperatures from 20 to 100 °C, pH of 2-10 and NaCl concentrations of 0-50 g/L. Serrawettin W1 significantly increased the cell surface hydrophobicity (CSH) and enhanced the bioavailability of hydrocarbon pollutants, which was conducive to the degradation of crude oil, including long-chain alkanes and aromatic hydrocarbons. Serratia marcescens S-1 has potential applications in bioremediation at low temperature.
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Mattingly AE, Weaver AA, Dimkovikj A, Shrout JD. Assessing Travel Conditions: Environmental and Host Influences On Bacterial Surface Motility. J Bacteriol 2018; 200:e00014-18. [PMID: 29555698 PMCID: PMC5952383 DOI: 10.1128/jb.00014-18] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023] Open
Abstract
The degree to which surface motile bacteria explore their surroundings is influenced by aspects of their local environment. Accordingly, regulation of surface motility is controlled by numerous chemical, physical, and biological stimuli. Discernment of such regulation due to these multiple cues is a formidable challenge. Additionally inherent ambiguity and variability from the assays used to assess surface motility can be an obstacle to clear delineation of regulated surface motility behavior. Numerous studies have reported single environmental determinants of microbial motility and lifestyle behavior but the translation of these data to understand surface motility and bacterial colonization of human host or environmental surfaces is unclear. Here, we describe the current state of the field and our understanding of exogenous factors that influence bacterial surface motility.
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Affiliation(s)
- Anne E. Mattingly
- Department of Civil and Environmental Engineering and Earth Sciences, University of Notre Dame, Notre Dame, Indiana, USA
| | - Abigail A. Weaver
- Department of Civil and Environmental Engineering and Earth Sciences, University of Notre Dame, Notre Dame, Indiana, USA
| | - Aleksandar Dimkovikj
- Department of Civil and Environmental Engineering and Earth Sciences, University of Notre Dame, Notre Dame, Indiana, USA
| | - Joshua D. Shrout
- Department of Civil and Environmental Engineering and Earth Sciences, University of Notre Dame, Notre Dame, Indiana, USA
- Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA
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Morris JD, Hewitt JL, Wolfe LG, Kamatkar NG, Chapman SM, Diener JM, Courtney AJ, Leevy WM, Shrout JD. Imaging and analysis of Pseudomonas aeruginosa swarming and rhamnolipid production. Appl Environ Microbiol 2011; 77:8310-7. [PMID: 21984238 PMCID: PMC3233055 DOI: 10.1128/aem.06644-11] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2011] [Accepted: 09/22/2011] [Indexed: 11/20/2022] Open
Abstract
Many bacteria spread over surfaces by "swarming" in groups. A problem for scientists who study swarming is the acquisition of statistically significant data that distinguish two observations or detail the temporal patterns and two-dimensional heterogeneities that occur. It is currently difficult to quantify differences between observed swarm phenotypes. Here, we present a method for acquisition of temporal surface motility data using time-lapse fluorescence and bioluminescence imaging. We specifically demonstrate three applications of our technique with the bacterium Pseudomonas aeruginosa. First, we quantify the temporal distribution of P. aeruginosa cells tagged with green fluorescent protein (GFP) and the surfactant rhamnolipid stained with the lipid dye Nile red. Second, we distinguish swarming of P. aeruginosa and Salmonella enterica serovar Typhimurium in a coswarming experiment. Lastly, we quantify differences in swarming and rhamnolipid production of several P. aeruginosa strains. While the best swarming strains produced the most rhamnolipid on surfaces, planktonic culture rhamnolipid production did not correlate with surface growth rhamnolipid production.
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Affiliation(s)
- Joshua D. Morris
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
| | - Jessica L. Hewitt
- Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana 46556
| | - Lawrence G. Wolfe
- Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana 46556
- NSF International, Ann Arbor, Michigan 48105
| | - Nachiket G. Kamatkar
- Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana 46556
| | - Sarah M. Chapman
- Freimann Life Science Center, University of Notre Dame, Notre Dame, Indiana 46556
| | - Justin M. Diener
- Freimann Life Science Center, University of Notre Dame, Notre Dame, Indiana 46556
| | - Andrew J. Courtney
- Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana 46556
| | - W. Matthew Leevy
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
- Notre Dame Integrated Imaging Facility, University of Notre Dame, Notre Dame, Indiana 46556
| | - Joshua D. Shrout
- Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana 46556
- Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana 46556
- Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana 46556
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Abstract
Swarming is a group motility behavior exhibited by bacteria that coordinate to spread over surfaces. Swarms of the bacterium Pseudomonas aeruginosa often develop tendril patterns and tendril development requires production of the surfactant rhamnolipid. We recently showed that harder surfaces limit induction of quorum sensing genes including those responsible for rhamnolipid synthesis, but it is not yet clear why similar populations of cells should behave differently on hard surfaces compared with soft (agar) surfaces. Here we explore the population dynamics during P. aeruginosa swarming. We find that the population of P. aeruginosa does not immediately increase as the swarm expands. We also detail three stages of population development during swarming.
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Abstract
The importance of rhamnolipid to swarming of the bacterium Pseudomonas aeruginosa is well established. It is frequently, but not exclusively, observed that P. aeruginosa swarms in tendril patterns—formation of these tendrils requires rhamnolipid. We were interested to explain the impact of surface changes on P. aeruginosa swarm tendril development. Here we report that P. aeruginosa quorum sensing and rhamnolipid production is impaired when growing on harder semi-solid surfaces. P. aeruginosa wild-type swarms showed huge variation in tendril formation with small deviations to the “standard” swarm agar concentration of 0.5%. These macroscopic differences correlated with microscopic investigation of cells close to the advancing swarm edge using fluorescent gene reporters. Tendril swarms showed significant rhlA-gfp reporter expression right up to the advancing edge of swarming cells while swarms without tendrils (grown on harder agar) showed no rhlA-gfp reporter expression near the advancing edge. This difference in rhamnolipid gene expression can be explained by the necessity of quorum sensing for rhamnolipid production. We provide evidence that harder surfaces seem to limit induction of quorum sensing genes near the advancing swarm edge and these localized effects were sufficient to explain the lack of tendril formation on hard agar. We were unable to artificially stimulate rhamnolipid tendril formation with added acyl-homoserine lactone signals or increasing the carbon nutrients. This suggests that quorum sensing on surfaces is controlled in a manner that is not solely population dependent.
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Affiliation(s)
- Nachiket G. Kamatkar
- Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana, United States of America
| | - Joshua D. Shrout
- Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana, United States of America
- Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, United States of America
- Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana, United States of America
- * E-mail:
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