Nutritional markers of undiagnosed type 2 diabetes in adults: Findings of a machine learning analysis with external validation and benchmarking

Detection of Diabetes through Microarray Genes with Enhancement of Classifiers Performance

Diabetes is a life-threatening, non-communicable disease. Diabetes mellitus is a prevalent chronic disease with a significant global impact. The timely detection of diabetes in patients is necessary for an effective treatment. The primary objective of this study is to propose a novel approach for identifying type II diabetes mellitus using microarray gene data. Specifically, our research focuses on the performance enhancement of methods for detecting diabetes. Four different Dimensionality Reduction techniques, Detrend Fluctuation Analysis (DFA), the Chi-square probability density function (Chi2pdf), the Firefly algorithm, and Cuckoo Search, are used to reduce high dimensional data. Metaheuristic algorithms like Particle Swarm Optimization (PSO) and Harmonic Search (HS) are used for feature selection. Seven classifiers, Non-Linear Regression (NLR), Linear Regression (LR), Logistics Regression (LoR), Gaussian Mixture Model (GMM), Bayesian Linear Discriminant Classifier (BLDC), Softmax Discriminant Classifier (SDC), and Support Vector Machine-Radial Basis Function (SVM-RBF), are utilized to classify the diabetic and non-diabetic classes. The classifiers' performances are analyzed through parameters such as accuracy, recall, precision, F1 score, error rate, Matthews Correlation Coefficient (MCC), Jaccard metric, and kappa. The SVM (RBF) classifier with the Chi2pdf Dimensionality Reduction technique with a PSO feature selection method attained a high accuracy of 91% with a Kappa of 0.7961, outperforming all of the other classifiers.

Machine Learning Approaches for Predicting Fatty Acid Classes in Popular US Snacks Using NHANES Data

In the US, people frequently snack between meals, consuming calorie-dense foods including baked goods (cakes), sweets, and desserts (ice cream) high in lipids, salt, and sugar. Monounsaturated fatty acid (MUFA) and polyunsaturated fatty acid (PUFA) are reasonably healthy; however, excessive consumption of food high in saturated fatty acid (SFA) has been related to an elevated risk of cardiovascular diseases. The National Health and Nutrition Survey (NHANES) uses a 24 h recall to collect information on people's food habits in the US. The complexity of the NHANES data necessitates using machine learning (ML) methods, a branch of data science that uses algorithms to collect large, unstructured, and structured data sets and identify correlations between the data variables. This study focused on determining the ability of ML regression models including artificial neural networks (ANNs), decision trees (DTs), k-nearest neighbors (KNNs), and support vector machines (SVMs) to assess the variability in total fat content concerning the classes (SFA, MUFA, and PUFA) of US-consumed snacks between 2017 and 2018. KNNs and DTs predicted SFA, MUFA, and PUFA with mean squared error (MSE) of 0.707, 0.489, 0.612, and 1.172, 0.846, 0.738, respectively. SVMs failed to predict the fatty acids accurately; however, ANNs performed satisfactorily. Using ensemble methods, DTs (10.635, 5.120, 7.075) showed higher error values for MSE than linear regression (LiR) (9.086, 3.698, 5.820) for SFA, MUFA, and PUFA prediction, respectively. R2 score ranged between -0.541 to 0.983 and 0.390 to 0.751 for models one and two, respectively. Extreme gradient boost (XGR), Light gradient boost (LightGBM), and random forest (RF) performed better than LiR, with RF having the lowest score for MSE in predicting all the fatty acid classes.

Recent applications of machine learning and deep learning models in the prediction, diagnosis, and management of diabetes: a comprehensive review

Diabetes as a metabolic illness can be characterized by increased amounts of blood glucose. This abnormal increase can lead to critical detriment to the other organs such as the kidneys, eyes, heart, nerves, and blood vessels. Therefore, its prediction, prognosis, and management are essential to prevent harmful effects and also recommend more useful treatments. For these goals, machine learning algorithms have found considerable attention and have been developed successfully. This review surveys the recently proposed machine learning (ML) and deep learning (DL) models for the objectives mentioned earlier. The reported results disclose that the ML and DL algorithms are promising approaches for controlling blood glucose and diabetes. However, they should be improved and employed in large datasets to affirm their applicability.

Machine Learning in Nutrition Research

Data currently generated in the field of nutrition are becoming increasingly complex and high-dimensional, bringing with them new methods of data analysis. The characteristics of machine learning (ML) make it suitable for such analysis and thus lend itself as an alternative tool to deal with data of this nature. ML has already been applied in important problem areas in nutrition, such as obesity, metabolic health, and malnutrition. Despite this, experts in nutrition are often without an understanding of ML, which limits its application and therefore potential to solve currently open questions. The current article aims to bridge this knowledge gap by supplying nutrition researchers with a resource to facilitate the use of ML in their research. ML is first explained and distinguished from existing solutions, with key examples of applications in the nutrition literature provided. Two case studies of domains in which ML is particularly applicable, precision nutrition and metabolomics, are then presented. Finally, a framework is outlined to guide interested researchers in integrating ML into their work. By acting as a resource to which researchers can refer, we hope to support the integration of ML in the field of nutrition to facilitate modern research.

Predicting the 2-Year Risk of Progression from Prediabetes to Diabetes Using Machine Learning among Chinese Elderly Adults

Identifying people with a high risk of developing diabetes among those with prediabetes may facilitate the implementation of a targeted lifestyle and pharmacological interventions. We aimed to establish machine learning models based on demographic and clinical characteristics to predict the risk of incident diabetes. We used data from the free medical examination service project for elderly people who were 65 years or older to develop logistic regression (LR), decision tree (DT), random forest (RF), and extreme gradient boosting (XGBoost) machine learning models for the follow-up results of 2019 and 2020 and performed internal validation. The receiver operating characteristic (ROC), sensitivity, specificity, accuracy, and F1 score were used to select the model with better performance. The average annual progression rate to diabetes in prediabetic elderly people was 14.21%. Each model was trained using eight features and one outcome variable from 9607 prediabetic individuals, and the performance of the models was assessed in 2402 prediabetes patients. The predictive ability of four models in the first year was better than in the second year. The XGBoost model performed relatively efficiently (ROC: 0.6742 for 2019 and 0.6707 for 2020). We established and compared four machine learning models to predict the risk of progression from prediabetes to diabetes. Although there was little difference in the performance of the four models, the XGBoost model had a relatively good ROC value, which might perform well in future exploration in this field.

Machine learning and deep learning predictive models for type 2 diabetes: a systematic review

Diabetes Mellitus is a severe, chronic disease that occurs when blood glucose levels rise above certain limits. Over the last years, machine and deep learning techniques have been used to predict diabetes and its complications. However, researchers and developers still face two main challenges when building type 2 diabetes predictive models. First, there is considerable heterogeneity in previous studies regarding techniques used, making it challenging to identify the optimal one. Second, there is a lack of transparency about the features used in the models, which reduces their interpretability. This systematic review aimed at providing answers to the above challenges. The review followed the PRISMA methodology primarily, enriched with the one proposed by Keele and Durham Universities. Ninety studies were included, and the type of model, complementary techniques, dataset, and performance parameters reported were extracted. Eighteen different types of models were compared, with tree-based algorithms showing top performances. Deep Neural Networks proved suboptimal, despite their ability to deal with big and dirty data. Balancing data and feature selection techniques proved helpful to increase the model's efficiency. Models trained on tidy datasets achieved almost perfect models.