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For: Turner SD, Ellison SL, Senalik DA, Simon PW, Spalding EP, Miller ND. An Automated Image Analysis Pipeline Enables Genetic Studies of Shoot and Root Morphology in Carrot (Daucus carota L.). Front Plant Sci 2018;9:1703. [PMID: 30542356 PMCID: PMC6277879 DOI: 10.3389/fpls.2018.01703] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2018] [Accepted: 11/01/2018] [Indexed: 05/04/2023]
Number Cited by Other Article(s)
1
Loarca J, Liou M, Dawson JC, Simon PW. Evaluation of shoot-growth variation in diverse carrot (Daucus carota L.) germplasm for genetic improvement of stand establishment. Front Plant Sci 2024;15:1342512. [PMID: 38708395 PMCID: PMC11066248 DOI: 10.3389/fpls.2024.1342512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 02/26/2024] [Indexed: 05/07/2024]
2
Vega A, Brainard SH, Goldman IL. Linkage mapping of root shape traits in two carrot populations. G3 (Bethesda) 2024;14:jkae041. [PMID: 38412554 PMCID: PMC10989876 DOI: 10.1093/g3journal/jkae041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 02/07/2024] [Accepted: 02/10/2024] [Indexed: 02/29/2024]
3
Liu J, Shui J, Xu C, Cai X, Wang Q, Wang X. Temporal phenotypic variation of spinach root traits and its relation to shoot performance. Sci Rep 2024;14:3233. [PMID: 38332007 PMCID: PMC10853530 DOI: 10.1038/s41598-024-53798-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Accepted: 02/05/2024] [Indexed: 02/10/2024]  Open
4
Goldman IL, Wang Y, Alfaro AV, Brainard S, Oravec MW, McGregor CE, van der Knaap E. Form and contour: breeding and genetics of organ shape from wild relatives to modern vegetable crops. Front Plant Sci 2023;14:1257707. [PMID: 37841632 PMCID: PMC10568141 DOI: 10.3389/fpls.2023.1257707] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Accepted: 08/28/2023] [Indexed: 10/17/2023]
5
Khadivi A, Mirheidari F, Moradi Y. Morphological characterizations of parsnip (Pastinaca sativa L.) to select superior genotypes. Food Sci Nutr 2023;11:3858-3874. [PMID: 37457187 PMCID: PMC10345681 DOI: 10.1002/fsn3.3371] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 03/22/2023] [Accepted: 03/31/2023] [Indexed: 07/18/2023]  Open
6
Rolhauser AG, Windfeld E, Hanson S, Wittman H, Thoreau C, Lyon A, Isaac ME. A trait-environment relationship approach to participatory plant breeding for organic agriculture. New Phytol 2022;235:1018-1031. [PMID: 35510804 PMCID: PMC9322327 DOI: 10.1111/nph.18203] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/22/2021] [Accepted: 04/23/2022] [Indexed: 06/14/2023]
7
Brainard SH, Ellison SL, Simon PW, Dawson JC, Goldman IL. Genetic characterization of carrot root shape and size using genome-wide association analysis and genomic-estimated breeding values. Theor Appl Genet 2022;135:605-622. [PMID: 34782932 PMCID: PMC8866378 DOI: 10.1007/s00122-021-03988-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Accepted: 10/27/2021] [Indexed: 06/13/2023]
8
Ou C, Sun T, Liu X, Li C, Li M, Wang X, Ren H, Zhao Z, Zhuang F. Detection of Chromosomal Segments Introgressed from Wild Species of Carrot into Cultivars: Quantitative Trait Loci Mapping for Morphological Features in Backcross Inbred Lines. Plants (Basel) 2022;11:391. [PMID: 35161370 PMCID: PMC8840429 DOI: 10.3390/plants11030391] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Revised: 01/25/2022] [Accepted: 01/28/2022] [Indexed: 06/14/2023]
9
Coe KM, Ellison S, Senalik D, Dawson J, Simon P. The influence of the Or and Carotene Hydroxylase genes on carotenoid accumulation in orange carrots [Daucus carota (L.)]. Theor Appl Genet 2021;134:3351-3362. [PMID: 34282485 DOI: 10.1007/s00122-021-03901-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Accepted: 06/28/2021] [Indexed: 06/13/2023]
10
Bhatta BB, Panda RK, Anandan A, Pradhan NSN, Mahender A, Rout KK, Patra BC, Ali J. Improvement of Phosphorus Use Efficiency in Rice by Adopting Image-Based Phenotyping and Tolerant Indices. Front Plant Sci 2021;12:717107. [PMID: 34531886 PMCID: PMC8438534 DOI: 10.3389/fpls.2021.717107] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/30/2021] [Accepted: 07/26/2021] [Indexed: 06/13/2023]
11
Brainard SH, Bustamante JA, Dawson JC, Spalding EP, Goldman IL. A Digital Image-Based Phenotyping Platform for Analyzing Root Shape Attributes in Carrot. Front Plant Sci 2021;12:690031. [PMID: 34220912 PMCID: PMC8244657 DOI: 10.3389/fpls.2021.690031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 05/21/2021] [Indexed: 06/13/2023]
12
Zingaretti LM, Monfort A, Pérez-Enciso M. Automatic Fruit Morphology Phenome and Genetic Analysis: An Application in the Octoploid Strawberry. Plant Phenomics 2021;2021:9812910. [PMID: 34056620 PMCID: PMC8139333 DOI: 10.34133/2021/9812910] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Accepted: 04/20/2021] [Indexed: 06/01/2023]
13
Chang F, Lv W, Lv P, Xiao Y, Yan W, Chen S, Zheng L, Xie P, Wang L, Karikari B, Abou-Elwafa SF, Jiang H, Zhao T. Exploring genetic architecture for pod-related traits in soybean using image-based phenotyping. Mol Breed 2021;41:28. [PMID: 37309355 PMCID: PMC10236113 DOI: 10.1007/s11032-021-01223-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Accepted: 03/18/2021] [Indexed: 06/14/2023]
14
Macko-Podgórni A, Stelmach K, Kwolek K, Machaj G, Ellison S, Senalik DA, Simon PW, Grzebelus D. Mining for Candidate Genes Controlling Secondary Growth of the Carrot Storage Root. Int J Mol Sci 2020;21:E4263. [PMID: 32549408 DOI: 10.3390/ijms21124263] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Revised: 06/10/2020] [Accepted: 06/12/2020] [Indexed: 12/02/2022]  Open
15
Feldmann MJ, Hardigan MA, Famula RA, López CM, Tabb A, Cole GS, Knapp SJ. Multi-dimensional machine learning approaches for fruit shape phenotyping in strawberry. Gigascience 2020;9:giaa030. [PMID: 32352533 PMCID: PMC7191992 DOI: 10.1093/gigascience/giaa030] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Revised: 02/06/2020] [Accepted: 03/10/2020] [Indexed: 12/04/2022]  Open
16
Leisner CP. Review: Climate change impacts on food security- focus on perennial cropping systems and nutritional value. Plant Sci 2020;293:110412. [PMID: 32081261 DOI: 10.1016/j.plantsci.2020.110412] [Citation(s) in RCA: 64] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Revised: 12/09/2019] [Accepted: 01/08/2020] [Indexed: 05/18/2023]
17
Anandan A, Mahender A, Sah RP, Bose LK, Subudhi H, Meher J, Reddy JN, Ali J. Non-destructive phenotyping for early seedling vigor in direct-seeded rice. Plant Methods 2020;16:127. [PMID: 32973913 PMCID: PMC7507283 DOI: 10.1186/s13007-020-00666-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2019] [Accepted: 09/04/2020] [Indexed: 05/17/2023]
18
Isaac ME, Martin AR. Accumulating crop functional trait data with citizen science. Sci Rep 2019;9:15715. [PMID: 31673016 DOI: 10.1038/s41598-019-51927-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2019] [Accepted: 10/10/2019] [Indexed: 12/19/2022]  Open
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