Dynamic analysis of optical microfiber coil resonators

We present transient time analysis of a two-turn optical microfiber coil resonator (MCR). Our dynamic model is based on two sets of equations, coupled mode and nonlinear Schrödinger equations. The pulse response of this device is obtained by numerically solving the modified sets of equations in a dynamic regime. The results show that if the input pulse of the MCR is set at an off-resonance wavelength, this resonator operates as an all-pass filter with neither loss nor time delay. But in the case of resonance, the output pulse may have loss and a relatively long time delay, according to the continuous rotation of light between the first and the second turns of the MCR. Tunable time delays up to t_d=320  ps are obtained by choosing different values of the coupling coefficients. Furthermore, the material and structural dispersions of the MCR are studied, and it is shown that strong dispersive effects can occur even in this millimeter dimensions photonic device. Pulse broadening and distortion effects of the MCR are studied in the dynamic regime. The results show that, for high bit rate applications, the dispersion effects of the MCR should be carefully considered. Finally, fundamental soliton solution and its conditions in the MCR are investigated.

Polymorphic core promoter GA-repeats alter gene expression of the early embryonic developmental genes

Protein complexes that bind to 'GAGA' DNA elements are necessary to replace nucleosomes to create a local chromatin environment that facilitates a variety of site-specific regulatory responses. Three to four elements are required for the disruption of a preassembled nucleosome. We have previously identified human protein-coding gene core promoters that are composed of exceptionally long GA-repeats. The functional implication of those GA-repeats is beginning to emerge in the core promoter of the human SOX5 gene, which is involved in multiple developmental processes. In the current study, we analyze the functional implication of GA-repeats in the core promoter of two additional genes, MECOM and GABRA3, whose expression is largely limited to embryogenesis. We report a significant difference in gene expression as a result of different alleles across those core promoters in the HEK-293 cell line. Across-species homology check for the GABRA3 GA-repeats revealed that those repeats are evolutionary conserved in mouse and primates (p<1 × 10(-8)). The MECOM core promoter GA-repeats are also conserved in numerous species, of which human has the longest repeat and complexity. We propose a novel role for GA-repeat core promoters to regulate gene expression in the genes involved in development and evolution.