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Nath S, Tulsiyan KD, Mohapatra B, Puthukkudi A, Alone PV, Biswal HS, Biswal BP. Covalent Organic Frameworks as Nano-Reservoir for Room Temperature RNA Storage. Chemistry 2024; 30:e202304079. [PMID: 38441909 DOI: 10.1002/chem.202304079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Indexed: 03/23/2024]
Abstract
The emerging role of Ribonucleic acids (RNAs) as therapeutics is alluring. However, RNAs are extremely labile under ambient conditions and typically need to be stored in cryogenic conditions (-20 °C to -80 °C). Hence, storage, stabilization, and transportation of RNA under ambient conditions have been an arduous task and remain an unsolved problem. In this work, a guanidinium-based ionic covalent organic framework (COF), TTGCl with nanotubular morphology, was synthesized and used as nano-reservoirs for room-temperature storage of RNA. To understand the role of the nanotubular morphology and chemical nature of TTGCl in stabilizing the RNA structure and for comparison purposes, a neutral COF, TMT-TT, is synthesized and studied. Further, density functional theory (DFT) studies confirmed non-covalent interaction between the COFs and the RNA nucleobases, facilitating reversible storage of RNA. RNA loaded in COFs was found to be resistant to enzymatic degradation when treated with RNase. Gel electrophoresis and sequencing confirmed the structural integrity of the recovered RNAs and their further processibility.
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Affiliation(s)
- Satyapriya Nath
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
- Homi Bhabha National Institute (HBNI), Training School Complex, Anushakti Nagar, Mumbai, 400094, INDIA
| | - Kiran D Tulsiyan
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
- Homi Bhabha National Institute (HBNI), Training School Complex, Anushakti Nagar, Mumbai, 400094, INDIA
| | - Binayak Mohapatra
- Homi Bhabha National Institute (HBNI), Training School Complex, Anushakti Nagar, Mumbai, 400094, INDIA
- School of Biological Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
| | - Adithyan Puthukkudi
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
- Homi Bhabha National Institute (HBNI), Training School Complex, Anushakti Nagar, Mumbai, 400094, INDIA
| | - Pankaj V Alone
- Homi Bhabha National Institute (HBNI), Training School Complex, Anushakti Nagar, Mumbai, 400094, INDIA
- School of Biological Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
- Centre for Interdisciplinary Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
| | - Himansu S Biswal
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
- Homi Bhabha National Institute (HBNI), Training School Complex, Anushakti Nagar, Mumbai, 400094, INDIA
- Centre for Interdisciplinary Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
| | - Bishnu P Biswal
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
- Homi Bhabha National Institute (HBNI), Training School Complex, Anushakti Nagar, Mumbai, 400094, INDIA
- Centre for Interdisciplinary Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, INDIA
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Bommakanti S, Nath S, Panda R, Panda SN, Mohapatra J, Puthukkudi A, Rajput CV, Anwar S, Das R, Biswal BP. Octupolar Cyclotriphosphazene-Cored Self-Standing Covalent Organic Framework Membranes as Nonlinear Optical Materials: Impact of Linkage Types and Material Forms. J Phys Chem Lett 2024:4965-4975. [PMID: 38690787 DOI: 10.1021/acs.jpclett.4c00589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2024]
Abstract
Conjugated and processable self-standing vinylene-linked covalent organic framework membranes (COFMs) are highly demanding for photonics and optoelectronics. In this work, we have fabricated the first cyclotriphosphazene (CTP) cored vinylene-linked self-standing COFM (CTP-PDAN). For comparison purposes, we have successfully fabricated the imine-linked congener (CTP-PDA). Leveraging the inherent nonlinear optical (NLO) response of the CTP core, both membranes were directly mounted to evaluate NLO parameters using the open-aperture (OA) Z-scan technique. Direct measurement of NLO responses on membranes is advantageous and free from solvent and scattering effects, making it a more practical approach compared to the conventional dispersion mode. The OA Z-scan transmission yields a reverse saturable absorption signature exhibiting a higher NLO absorption coefficient (β) of 58.37 cm/GW for CTP-PDAN, compared to that of the imine-linked CTP-PDA COFM (β = 8.5 cm/GW). These results can be correlated to the efficient conjugation through the vinylene linkage in CTP-PDAN compared to the imine linked congener.
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Affiliation(s)
- Suresh Bommakanti
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
| | - Satyapriya Nath
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Rudrashish Panda
- School of Physical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
| | - Sankalpa N Panda
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Jeebanjyoti Mohapatra
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Adithyan Puthukkudi
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Chetan V Rajput
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
| | - Sharmistha Anwar
- CSIR-Institute of Minerals and Materials Technology, Bhubaneswar, Odisha 751013, India
| | - Ritwick Das
- School of Physical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
- Optics and Photonics Centre, Indian Institute of Technology Delhi, Hauz Khas, New Delhi, 110016, India
| | - Bishnu P Biswal
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
- Centre for Interdisciplinary Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha 752050, India
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Puthukkudi A, Nath S, Shee P, Dutta A, Rajput CV, Bommakanti S, Mohapatra J, Samal M, Anwar S, Pal S, Biswal BP. Terahertz Conductivity of Free-Standing 3D Covalent Organic Framework Membranes Fabricated via Triple-Layer-Dual Interfacial Approach. Adv Mater 2024; 36:e2312960. [PMID: 38146892 DOI: 10.1002/adma.202312960] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Indexed: 12/27/2023]
Abstract
Processable covalent organic framework membranes (COFM) are emerging as potential semiconducting materials for device applications. Nevertheless, the fabrication of crystalline and free-standing 3D COFMs is challenging. In this work, a unique time and solvent-efficient triple-layer-dual interfacial (TLDI) approach for the simultaneous synthesis of two 3D COFMs from a single system is developed. Besides, for the first time, the optical conductivity of these free-standing 3D COFMs is analyzed using terahertz (THz) spectroscopy in transmission mode. Interestingly, these membranes show excellent transmittance at THz frequencies with very high intrinsic THz conductivities. The evaluated scattering time and plasma frequency of the free carriers of the COFMs are highly promising for future applications in optoelectronic devices in THz frequencies.
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Affiliation(s)
- Adithyan Puthukkudi
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar Jatni, Khurda, Odisha, 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Satyapriya Nath
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar Jatni, Khurda, Odisha, 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Payel Shee
- School of Physical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha, 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Arpita Dutta
- School of Physical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha, 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Chetan V Rajput
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar Jatni, Khurda, Odisha, 752050, India
| | - Suresh Bommakanti
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar Jatni, Khurda, Odisha, 752050, India
| | - Jeebanjyoti Mohapatra
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar Jatni, Khurda, Odisha, 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Mahalaxmi Samal
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar Jatni, Khurda, Odisha, 752050, India
| | - Sharmistha Anwar
- CSIR-Institute of Minerals and Materials Technology, Bhubaneswar, 751013, Odisha, India
| | - Shovon Pal
- School of Physical Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha, 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
- Centre for Interdisciplinary Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha, 752050, India
| | - Bishnu P Biswal
- School of Chemical Sciences, National Institute of Science Education and Research Bhubaneswar Jatni, Khurda, Odisha, 752050, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
- Centre for Interdisciplinary Sciences, National Institute of Science Education and Research Bhubaneswar, Jatni, Khurda, Odisha, 752050, India
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Nath S, Puthukkudi A, Mohapatra J, Biswal BP. Covalent Organic Frameworks as Emerging Nonlinear Optical Materials. Angew Chem Int Ed Engl 2023; 62:e202218974. [PMID: 36729044 DOI: 10.1002/anie.202218974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 02/02/2023] [Accepted: 02/02/2023] [Indexed: 02/03/2023]
Abstract
The vastness of organic synthetic strategies and knowledge of reticular chemistry have made covalent organic frameworks (COFs) one of the most chemically and structurally diverse class of materials with potential applications ranging from gas storage, molecular separation, and catalysis to energy storage and magnetism. Recently, this class of porous materials has garnered increasing interest as potential nonlinear optical (NLO) materials. Traditionally, inorganic crystals, small-molecule organic chromophores, and oligomers have been studied for their NLO response. Nevertheless, COFs offer significant advantages over existing NLO materials in terms of higher mechanical strength, thermochemical stability, and extended conjugation. Herein, we discuss crucial aspects, terminology, and measurement techniques related to NLO, followed by a critical analysis of the design principles for COFs with NLO response. Furthermore, we touch on selected potential applications of these NLO materials. Finally, future prospects and challenges of COFs as NLO materials are discussed.
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Affiliation(s)
- Satyapriya Nath
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhaba National Institute (HBNI), Training School Complex Anushakti Nagar, Mumbai, 400094, India
| | - Adithyan Puthukkudi
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhaba National Institute (HBNI), Training School Complex Anushakti Nagar, Mumbai, 400094, India
| | - Jeebanjyoti Mohapatra
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhaba National Institute (HBNI), Training School Complex Anushakti Nagar, Mumbai, 400094, India
| | - Bishnu P Biswal
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhaba National Institute (HBNI), Training School Complex Anushakti Nagar, Mumbai, 400094, India
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Nath S, Puthukkudi A, Mohapatra J, Biswal BP. Covalent Organic Frameworks as Emerging Nonlinear Optical Materials. Angew Chem Int Ed Engl 2023. [DOI: 10.1002/ange.202218974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Satyapriya Nath
- NISER: National Institute of Science Education and Research SCS INDIA
| | | | | | - Bishnu P. Biswal
- NISER: National Institute of Science Education and Research Chemistry JatniKhurda 752050 Bhubaneswar INDIA
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Nath S, Puthukkudi A, Mohapatra J, Bommakanti S, Chandrasekhar N, Biswal BP. Carbon-Carbon Linked Organic Frameworks: An Explicit Summary and Analysis. Macromol Rapid Commun 2023; 44:e2200950. [PMID: 36625406 DOI: 10.1002/marc.202200950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Indexed: 01/11/2023]
Abstract
Organic frameworks with carbon-carbon (CC) linkage are an important class of materials owing to their outstanding chemical stability and extended π-electron delocalization resulting in unique optoelectronic properties. In the first part of this review article, the design principles for the bottom-up synthesis of 2D and 3D sp/sp2 CC linked organic frameworks are summarized. Representative reaction methodologies, such as Knoevenagel condensation, Aldol condensation, Horner-Wadsworth-Emmons reaction, Wittig reaction, and coupling reactions (Ullmann, Suzuki, Heck, Yamamoto, etc.) are included. This is discussed in the context of their reaction mechanism, reaction dynamics, and whether and why resulting in an amorphous or crystalline product. This is followed by a discussion of different state-of-the art bottom-up synthesis methodologies, like solvothermal, interfacial, and solid-state synthesis. In the second part, the structure-property relationships in CC linked organic frameworks with representative examples of organocatalysis, photo(electro)catalysis, energy storage and conversion, magnetism, and molecular storage and separation are analyzed. The importance of linkage type, building blocks, topology, and crystallinity of the framework material in connection with the structure-property relationship is highlighted. Finally, brief concluding remarks are presented based on the key development of bottom-up synthetic methods and provide perspectives for future development in this field.
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Affiliation(s)
- Satyapriya Nath
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Adithyan Puthukkudi
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Jeebanjyoti Mohapatra
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Suresh Bommakanti
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India
| | - Naisa Chandrasekhar
- Centre for Advancing Electronics Dresden (cfaed), Department of Chemistry and Food Chemistry, Dresden University of Technology, Momenstrasse 4, 01069, Dresden, Germany
| | - Bishnu P Biswal
- School of Chemical Sciences, National Institute of Science Education and Research (NISER) Bhubaneswar, Jatni, Khurda, Odisha, 752050, India.,Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
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