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Abstract
Biomedical research has long relied on small-animal studies to elucidate disease process and develop new medical treatments. The introduction of in vivo functional imaging technology, such as PET, has allowed investigators to peer inside their subjects and follow disease progression longitudinally as well as improve understanding of normal biological processes. Recent developments in CRISPR, immuno-PET, and high-resolution in vivo imaging have only increased the importance of small-animal, or preclinical, PET imaging. Other drivers of preclinical PET innovation include new combinations of imaging technologies, such as PET/MR imaging, which require changes to PET hardware.
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Affiliation(s)
- Adrienne L Lehnert
- Department of Radiology, University of Washington, 1959 Northeast Pacific Street, UW Box 356043, Seattle, WA, USA.
| | - Robert S Miyaoka
- Department of Radiology, University of Washington, 1959 Northeast Pacific Street, UW Box 356043, Seattle, WA, USA
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Labadie KP, Lehnert AL, Kenoyer AL, Hamlin DK, Ludwig AD, Utria AF, Daniel SK, Mihailovic TN, Prossnitz A, Orozco JJ, Li Y, Wilbur DS, Miyaoka RS, Park JO. Glypican-3 targeted positron emission tomography detects sub-centimeter tumors in a xenograft model of hepatocellular carcinoma. EJNMMI Res 2023; 13:35. [PMID: 37103671 PMCID: PMC10140215 DOI: 10.1186/s13550-023-00980-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Accepted: 03/29/2023] [Indexed: 04/28/2023] Open
Abstract
BACKGROUND Early intrahepatic recurrence is common after surgical resection of hepatocellular carcinoma (HCC) and leads to increased morbidity and mortality. Insensitive and nonspecific diagnostic imaging contributes to EIR and results in missed treatment opportunities. In addition, novel modalities are needed to identify targets amenable for targeted molecular therapy. In this study, we evaluated a zirconium-89 radiolabeled glypican-3 (GPC3) targeting antibody conjugate (89Zr-αGPC3) for use in positron emission tomography (PET) for detection of small, GPC3+ HCC in an orthotopic murine model. Athymic nu/J mice received hepG2, a GPC3+ human HCC cell line, into the hepatic subcapsular space. Tumor-bearing mice were imaged by PET/computerized tomography (CT) 4 days after tail vein injection of 89Zr-αGPC3. Livers were then excised for the tumors to be identified, measured, bisected, and then serially sectioned at 500 μm increments. Sensitivity and specificity of PET/CT for 89Zr-αGPC3-avid tumors were assessed using tumor confirmation on histologic sections as the gold standard. RESULTS In tumor-bearing mice, 89Zr-αGPC3 avidly accumulated in the tumor within four hours of injection with ongoing accumulation over time. There was minimal off-target deposition and rapid bloodstream clearance. Thirty-eight of 43 animals had an identifiable tumor on histologic analysis. 89Zr-αGPC3 immuno-PET detected all 38 histologically confirmed tumors with a sensitivity of 100%, with the smallest tumor detected measuring 330 μm in diameter. Tumor-to-liver ratios of 89Zr-αGPC3 uptake were high, creating excellent spatial resolution for ease of tumor detection on PET/CT. Two of five tumors that were observed on PET/CT were not identified on histologic analysis, yielding a specificity of 60%. CONCLUSIONS 89Zr-αGPC3 avidly accumulated in GPC3+ tumors with minimal off-target sequestration. 89Zr-αGPC3 immuno-PET yielded a sensitivity of 100% and detected sub-millimeter tumors. This technology may improve diagnostic sensitivity of small HCC and select GPC3+ tumors for targeted therapy. Human trials are warranted to assess its impact.
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Affiliation(s)
- Kevin P Labadie
- Department of Surgery, University of Washington School of Medicine, 1959 NE Pacific Street, Health Sciences Bldg. Room BB-442, Box 356410, Seattle, WA, 98195-6410, USA
| | - Adrienne L Lehnert
- Department of Radiology, University of Washington School of Medicine, 1959 NE Pacific Street, Seattle, WA, 98195, USA
| | - Aimee L Kenoyer
- Clinical Research Division, Fred Hutch Cancer Research Center, 100 Fairview Ave N, Seattle, WA, 98109, USA
| | - Donald K Hamlin
- Department of Radiation Oncology, University of Washington School of Medicine, 616 NE Northlake Pl., Seattle, WA, 98105, USA
| | - Andrew D Ludwig
- Department of Surgery, University of Washington School of Medicine, 1959 NE Pacific Street, Health Sciences Bldg. Room BB-442, Box 356410, Seattle, WA, 98195-6410, USA
| | - Alan F Utria
- Department of Surgery, University of Washington School of Medicine, 1959 NE Pacific Street, Health Sciences Bldg. Room BB-442, Box 356410, Seattle, WA, 98195-6410, USA
| | - Sara K Daniel
- Department of Surgery, University of Washington School of Medicine, 1959 NE Pacific Street, Health Sciences Bldg. Room BB-442, Box 356410, Seattle, WA, 98195-6410, USA
| | - Tara N Mihailovic
- Department of Surgery, University of Washington School of Medicine, 1959 NE Pacific Street, Health Sciences Bldg. Room BB-442, Box 356410, Seattle, WA, 98195-6410, USA
| | - Alexander Prossnitz
- Department of Bioengineering, University of Washington, 3720 15th Ave NE, Seattle, WA, 98195, USA
| | - Johnnie J Orozco
- Clinical Research Division, Fred Hutch Cancer Research Center, 100 Fairview Ave N, Seattle, WA, 98109, USA
| | - Yawen Li
- Department of Radiation Oncology, University of Washington School of Medicine, 616 NE Northlake Pl., Seattle, WA, 98105, USA
| | - D Scott Wilbur
- Department of Radiation Oncology, University of Washington School of Medicine, 616 NE Northlake Pl., Seattle, WA, 98105, USA
| | - Robert S Miyaoka
- Department of Radiology, University of Washington School of Medicine, 1959 NE Pacific Street, Seattle, WA, 98195, USA
| | - James O Park
- Department of Surgery, University of Washington School of Medicine, 1959 NE Pacific Street, Health Sciences Bldg. Room BB-442, Box 356410, Seattle, WA, 98195-6410, USA.
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Gammon ST, Cohen AS, Lehnert AL, Sullivan DC, Malyarenko D, Manning HC, Hormuth DA, Daldrup-Link HE, An H, Quirk JD, Shoghi K, Pagel MD, Kinahan PE, Miyaoka RS, Houghton AM, Lewis MT, Larson P, Sriram R, Blocker SJ, Pickup S, Badea A, Badea CT, Yankeelov TE, Chenevert TL. An Online Repository for Pre-Clinical Imaging Protocols (PIPs). Tomography 2023; 9:750-758. [PMID: 37104131 PMCID: PMC10145184 DOI: 10.3390/tomography9020060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2023] [Revised: 03/15/2023] [Accepted: 03/16/2023] [Indexed: 03/29/2023] Open
Abstract
Providing method descriptions that are more detailed than currently available in typical peer reviewed journals has been identified as an actionable area for improvement. In the biochemical and cell biology space, this need has been met through the creation of new journals focused on detailed protocols and materials sourcing. However, this format is not well suited for capturing instrument validation, detailed imaging protocols, and extensive statistical analysis. Furthermore, the need for additional information must be counterbalanced by the additional time burden placed upon researchers who may be already overtasked. To address these competing issues, this white paper describes protocol templates for positron emission tomography (PET), X-ray computed tomography (CT), and magnetic resonance imaging (MRI) that can be leveraged by the broad community of quantitative imaging experts to write and self-publish protocols in protocols.io. Similar to the Structured Transparent Accessible Reproducible (STAR) or Journal of Visualized Experiments (JoVE) articles, authors are encouraged to publish peer reviewed papers and then to submit more detailed experimental protocols using this template to the online resource. Such protocols should be easy to use, readily accessible, readily searchable, considered open access, enable community feedback, editable, and citable by the author.
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Affiliation(s)
- Seth T. Gammon
- Department of Cancer Systems Imaging, University of MD Anderson Cancer Center, 1881 E. Road, Houston, TX 77030, USA
- Correspondence: ; Tel.: +713-745-3705
| | - Allison S. Cohen
- Department of Cancer Systems Imaging, University of MD Anderson Cancer Center, 1881 E. Road, Houston, TX 77030, USA
| | | | - Daniel C. Sullivan
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA 94158, USA
| | - Dariya Malyarenko
- Department of Radiology, University of Michigan, Ann Arbor, MI 48108, USA
| | - Henry Charles Manning
- Department of Cancer Systems Imaging, University of MD Anderson Cancer Center, 1881 E. Road, Houston, TX 77030, USA
| | - David A. Hormuth
- Oden Institute for Computational Engineering and Sciences, and Livestrong Cancer Institutes, Dell Medical School, The University of Texas at Austin, Austin, TX 78712, USA
| | - Heike E. Daldrup-Link
- Department of Radiology, Molecular Imaging Program at Stanford, Stanford University School of Medicine, Stanford, CA 94305, USA
| | - Hongyu An
- Mallinckrodt Institute of Radiology, Washington University, St. Louis, MO 63110, USA
| | - James D. Quirk
- Mallinckrodt Institute of Radiology, Washington University, St. Louis, MO 63110, USA
| | - Kooresh Shoghi
- Mallinckrodt Institute of Radiology, Washington University, St. Louis, MO 63110, USA
| | - Mark David Pagel
- Department of Cancer Systems Imaging, University of MD Anderson Cancer Center, 1881 E. Road, Houston, TX 77030, USA
| | - Paul E. Kinahan
- Department of Radiology, University of Washington, Seattle, WA 98105, USA
| | - Robert S. Miyaoka
- Department of Radiology, University of Washington, Seattle, WA 98105, USA
| | | | - Michael T. Lewis
- Lester and Sue Smith Breast Center, Dan L Duncan Comprehensive Cancer Center, Houston, TX 77030, USA
| | - Peder Larson
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA 94158, USA
| | - Renuka Sriram
- Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA 94158, USA
| | - Stephanie J. Blocker
- Center for In Vivo Microscopy, Department of Radiology, Duke University School of Medicine, Durham, NC 27710, USA
| | - Stephen Pickup
- Department of Radiology, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Alexandra Badea
- Department of Radiology, Duke University, Durham, NC 27708, USA
| | | | - Thomas E. Yankeelov
- Department of Biomedical Engineering, Diagnostic Medicine, and Oncology, Oden Institute for Computational Engineering and Sciences, Livestrong Cancer Institutes, The University of Texas at Austin, Austin, TX 78712, USA
- Department of Imaging Physics, MD Anderson Cancer Center, Houston, TX 77030, USA
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Pendergraft LT, Lehnert AL, Marzluff JM. Individual and social factors affecting the ability of American crows to solve and master a string pulling task. Ethology 2019; 126:229-245. [PMID: 33776175 DOI: 10.1111/eth.12980] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Crows and other birds in the family Corvidae regularly share information to learn the identity and whereabouts of dangerous predators, but can they use social learning to solve a novel task for a food reward? Here we examined the factors affecting the ability of 27 wild-caught American crows to solve a common string-pulling task in a laboratory setting. We split crows into two groups; one group was given the task after repeatedly observing a conspecific model the solution, the other solved in the absence of conspecific models. We recorded the crows' estimated age, sex, size, body condition, level of nervousness, and brain volume using DICOM images from a CT scan. Although none of these variables were statistically significant, crows without a conspecific model and large brain volumes consistently mastered the task in the minimum number of days, whereas those with conspecific models and smaller brain volumes required varying and sometimes a substantial number of days to master the task. We found indirect evidence that body condition might also be important for motivating crows to solve the task. Crows with conspecific models were no more likely to initially solve the task than those working the puzzle without social information, but those that mastered the task usually copied the method most frequently demonstrated by their knowledgeable neighbors. These findings suggest that brain volume and possibly body condition may be factors in learning new tasks, and that crows can use social learning to refine their ability to obtain a novel food source, although they must initially learn to access it themselves.
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Affiliation(s)
| | | | - John M Marzluff
- University of Washington, School of Environmental and Forest Sciences
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Lehnert AL, Hunter WCJ, McDougald WA, Harrison RL, Lewellen TK, Vesselle HJ, Miyaoka RS. Development and testing of SPECT/CT lung phantoms made from expanding polyurethane foam. Med Phys 2019; 46:5593-5601. [DOI: 10.1002/mp.13832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2019] [Revised: 07/25/2019] [Accepted: 08/30/2019] [Indexed: 11/11/2022] Open
Affiliation(s)
| | | | | | | | | | | | - Robert S. Miyaoka
- Department of Radiology University of Washington Seattle WA 98195 USA
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Affiliation(s)
- Adrienne L. Lehnert
- University of Michigan, Department of Nuclear Engineering and Radiological Sciences2355 Bonisteel Boulevard, Ann Arbor, Michigan 48109-2104
| | - Kimberlee J. Kearfott
- University of Michigan, Department of Nuclear Engineering and Radiological Sciences2355 Bonisteel Boulevard, Ann Arbor, Michigan 48109-2104
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Lehnert AL, Kearfott KJ. Simulations for Developing a Flag-Based Active Neutron Interrogation Method for Explosives Detection in Sea-Land Cargo Containers. NUCL TECHNOL 2017. [DOI: 10.13182/nt11-125] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Adrienne L. Lehnert
- University of Michigan, Department of Nuclear Engineering and Radiological Sciences 2355 Bonisteel Boulevard, Ann Arbor, Michigan 48109-2104
| | - Kimberlee J. Kearfott
- University of Michigan, Department of Nuclear Engineering and Radiological Sciences 2355 Bonisteel Boulevard, Ann Arbor, Michigan 48109-2104
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Lehnert AL, Hunter WCJ, Lewellen TK, Miyaoka RS. Depth of Interaction Calibration and Capabilities in 2×2 Discrete Crystal Arrays and Digital Silicon Photomultipliers. IEEE Trans Nucl Sci 2016; 63:4-7. [PMID: 32063651 PMCID: PMC7020910 DOI: 10.1109/tns.2015.2498524] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Digital silicon photomultiplers (dSiPMs) have potential in the advancement of PET detectors. Their advantages include decreased dark counts through selective microcell activation, fast timing, and flexibility configuring event triggering and collection. Further improvements in PET image resolution are possible when photon depth of interaction (DOI) is available, as this reduces parallax error caused by mispositioning events at the peripheral field of view. These improvements are desirable in smaller ring diameter PET systems, such as whole body PET/MRI. In this study we quantify the DOI capabilities of a unique crystal array design (termed dual light sharing arrays or DLSA) that takes advantage of the 2-by-2-pixel die readout logic of a PDPC dSiPM (Philips Digital Photon Counting 3200) device by Philips Medical Systems. The DLSA is comprised of a 2×2 array of 4×4×22 mm3 LYSO crystals; inter-crystal surfaces were optically coupled in part with high-index optical adhesive and optically isolated in complimentary parts with mirror-film reflector such that light sharing was depth-dependent and different along two axes. The DLSA was mounted to one die of a PDPC and its depth-dependent response to 511-keV gamma rays was calibrated using a coincidence-collimated beam from both side and entrance surfaces. Entrance surface DOI calibration was performed through an iterative application of maximum likelihood calculations based on the signal ratio in crystals adjacent to the crystal of interaction. Results showed timing resolutions of 350-370 ps and energy resolutions of 10-12% while achieving a DOI position estimation of 6-7 mm FWHM. Significant improvements in depth estimation error were found when using maximum likelihood estimation and 3-4 depth bins. Furthermore, similar calibration results were obtained for both side-surface and entrance-surface illumination methods, which suggest that PET system calibrations may be easily performed using a monoenergetic flood source with entrance surface illumination.
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Affiliation(s)
| | | | - Tom K Lewellen
- University of Washington Department of Radiology, Seattle, WA USA
| | - Robert S Miyaoka
- University of Washington Department of Radiology, Seattle, WA USA
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Lehnert AL, Thompson KH, Kearfott KJ. Application of an equilibrium-based model for diffusion barrier charcoal canisters in a small volume non-steady state radon chamber. Health Phys 2011; 100:138-147. [PMID: 21399428 DOI: 10.1097/hp.0b013e3181edb807] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Radon in indoor air is often measured using activated charcoal in canisters. These are generally calibrated using large, humidity- and temperature-controlled radon chambers capable of maintaining a constant radon concentration over several days. Reliable and reproducible chambers are expensive and may be difficult to create and maintain. This study characterizes a small radon chamber in which Rn gas is allowed to build up over a period of several days for use in charcoal canister calibration and educational demonstrations, as well as various radon experiments using charcoal canisters. Predictive models have been developed that accurately describe radon gas kinetics in the charcoal canisters. Three models are available for kinetics in the small chamber with and without radon-adsorbing charcoal canisters. Presented here are both theoretical and semi-empirical applications of this equilibrium-based model of radon adsorption as applied to canisters in the small chamber. Several charcoal canister experiments in the small chamber with an equilibrium-based model of radon adsorption applied are reported. Results show that it is necessary to include a continuous radon monitor in the chamber during canister exposures, as the radon removal rate is highly variable. Furthermore, the presence of the canisters significantly decreases the amount of radon in the small chamber, especially when several canisters are present. It was found that canister response in the small chamber is largely consistent with the equilibrium-based model for both applications, with average errors of 1% for the theoretical application and -4% for the semi-empirical approach.
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Affiliation(s)
- A L Lehnert
- Radiological Health Engineering Laboratory, Department of Nuclear Engineering and Radiological Sciences, University of Michigan, 2355 Bonisteel Boulevard, Ann Arbor, MI 48109-2104, USA
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Abstract
Radon in indoor air is often measured using canisters of activated charcoal that function by adsorbing radon gas. The use of a diffusion barrier charcoal canister (DBCC) minimizes the effects of environmental humidity and extends the useful exposure time by several days. Many DBCC protocols model charcoal canisters as simple integrating detectors, which introduces errors due to the fact that radon uptake changes over the exposure period. Errors are compensated for by calculating a calibration factor that is nonlinear with respect to exposure time. This study involves the development and testing of an equilibrium-based model and corresponding measurement protocol that treats the charcoal canisters as a system coming into equilibrium with the surrounding radon environment. This model applies to both constant and temporally varying radon concentration situations, which was essential, as efforts are currently underway using a temporally varying radon chamber. It was found that the DBCCs equilibrate following the relationship E = (1 - e) where E is a measure of how close the DBCC is to equilibrium, t is exposure time, and q is the equilibration constant. This equilibration constant was empirically determined to be 0.019 h. The proposed model was tested in a blind test as well as compared with the currently accepted U.S. Environmental Protection Agency (U.S. EPA) model. Comparisons between the two methods showed a slight decrease in measurement error when using the equilibrium-based method as compared to the U.S. EPA method.
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Affiliation(s)
- A L Lehnert
- Department of Nuclear Engineering and Radiological Sciences, University of Michigan, Radiological Health Engineering Laboratory, Ann Arbor, MI 48109-2104, USA
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