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Genc S, Ademoglu E, Aydin F, Omer B. The performance evaluation of Snibe Maglumi 4000P for hormone assays. Clin Chim Acta 2019. [DOI: 10.1016/j.cca.2019.03.067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Omer B, Telci A, Turker F, Tutuncu Y, Dinccag N, Karsidag K, Yilmaz T, Satman I, Genc S. The prevalence of folate deficiency in the adult population in Turkey: The association with prediabetes and diabetes. Clin Chim Acta 2019. [DOI: 10.1016/j.cca.2019.03.1311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Genc S, Dervisoglu E, Erdem S, Arslan O, Aktan M, Omer B. Comparison of performance and abnormal cell flagging of two automated hematology analyzers: Sysmex XN 3000 and Beckman Coulter DxH 800. Int J Lab Hematol 2017; 39:633-640. [DOI: 10.1111/ijlh.12717] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2017] [Accepted: 06/09/2017] [Indexed: 11/28/2022]
Affiliation(s)
- S. Genc
- Istanbul Faculty of Medicine; Department of Biochemistry; Istanbul University; Istanbul Turkey
| | - E. Dervisoglu
- Istanbul Faculty of Medicine; Department of Biochemistry; Istanbul University; Istanbul Turkey
| | - S. Erdem
- Istanbul Faculty of Medicine; Department of Hematology; Istanbul University; Istanbul Turkey
| | - O. Arslan
- Istanbul Faculty of Medicine; Department of Hematology; Istanbul University; Istanbul Turkey
| | - M. Aktan
- Istanbul Faculty of Medicine; Department of Hematology; Istanbul University; Istanbul Turkey
| | - B. Omer
- Istanbul Faculty of Medicine; Department of Biochemistry; Istanbul University; Istanbul Turkey
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Sakar MN, Unal A, Atay AE, Zebitay AG, Verit FF, Demir S, Turfan M, Omer B. Is there an effect of thyroid autoimmunity on the outcomes of assisted reproduction? J OBSTET GYNAECOL 2015; 36:213-7. [PMID: 26492218 DOI: 10.3109/01443615.2015.1049253] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
We aimed to evaluate the role of thyroid autoantibodies (TAA) on the outcomes of intracytoplasmic sperm injection-embryo transfer (ICSI-ET). A prospective case-control study was conducted in the in vitro fertilisation (IVF) centre of Suleymaniye Maternity Training and Research Hospital, Istanbul, Turkey between July 2013 and March 2014. A total of 49 (19.52%) TAA-positive and 202 TAA-negative patients were enrolled. Demographic characteristics and laboratory parameters were recorded. All patients underwent ICSI-ET. Thirty-one TAA-positive patients (32 cycles) and 121 TAA-negative patients (126 cycles) completed the study. Mean female age, body mass index (BMI), type of infertility, duration of infertility, antral follicle count (AFC), anti-Müllerian hormone (AMH), basal follicle stimulating hormone (bFSH), luteinising hormone (bLH), and oestradiol (bE2), prolactin and thyroid hormone profiles, male age and aetiology of infertility of both groups were similar (p > 0.05). There was no significant difference between groups in terms of duration and dose of gonadotropin (Gn) therapy, day of human chorionic Gn (hCG) administration, serum E2 and progesterone levels, number of collected oocytes, ratio of fertilisation, number of available embryos, positive pregnancy test, biochemical pregnancy, clinical pregnancy, ratio of miscarriage and ongoing pregnancy (p > 0.05). In conclusion, we failed to demonstrate a significant role of TAA on the outcomes of ICSI-ET in euthyroid patients. Further studies with larger numbers of participants are required to clarify these data.
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Affiliation(s)
- M N Sakar
- a Department of Obstetrics and Gynecology , Diyarbakir Gazi Yasargil Training and Research Hospital , Diyarbakir , Turkey
| | - A Unal
- b Department of Obstetrics and Gynecology , Suleymaniye Maternity Training and Research Hospital , Istanbul , Turkey
| | - A E Atay
- c Department of Internal Medicine , Bagcilar Training and Research Hospital , Istanbul , Turkey
| | - A G Zebitay
- b Department of Obstetrics and Gynecology , Suleymaniye Maternity Training and Research Hospital , Istanbul , Turkey
| | - F F Verit
- b Department of Obstetrics and Gynecology , Suleymaniye Maternity Training and Research Hospital , Istanbul , Turkey
| | - S Demir
- d Department of Obstetrics and Gynecology , Haseki Training and Research Hospital , Istanbul , Turkey
| | - M Turfan
- e Department of Microbiology , Suleymaniye Maternity Training and Research Hospital , Istanbul , Turkey
| | - B Omer
- f Department of Biochemistry , School of Medicine, Istanbul University , Istanbul , Turkey
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Sargin M, Orhan G, Aka S, Mete M, Akar R, Ozatik M, Engin C, Balkanay M, Omer B. The Current Status of Heart Transplantation and Mechanical Circulatory Support in Turkey: Facts and Factors. J Heart Lung Transplant 2015. [DOI: 10.1016/j.healun.2015.01.124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Omer B, Krebs S, Omer H, Noor TO. Steroid-sparing effect of wormwood (Artemisia absinthium) in Crohn's disease: a double-blind placebo-controlled study. Phytomedicine 2007; 14:87-95. [PMID: 17240130 DOI: 10.1016/j.phymed.2007.01.001] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
In this double-blind study carried out at five sites in Germany, 40 patients suffering from Crohn's disease receiving a stable daily dose of steroids at an equivalent of 40 mg or less of prednisone for at least 3 weeks were administered a herbal blend containing wormwood herb (3 x 500 mg/day) or a placebo for 10 weeks. Besides steroids, 5-aminosalicylates, if dose remained constant for at least 4 weeks prior to entering the trial and/or azathioprine, stable dose for at least 8 weeks, or methotrexate, stable dose for at least 6 weeks, were permitted as concomitant medications. The recruited 40 patients - 20 in each treatment group, were evaluated with the help of a Crohn's Disease Activity Index (CDAI) questionnaire, an Inflammatory Bowel Disease Questionnaire (IBDQ), the 21-item Hamilton Depression Scale (HAMD) and an 8-item Visual Analogue Scale (VA-Scale) in 2-week intervals during the first 10 study weeks, and then at week 12, 16 and 20, which were the trial-medication free observation periods. The initial stable dose of steroids was maintained until week 2, after that a defined tapering schedule was started so that at the start of week 10 all the patients were free of steroids. At the end of week 10 the trial medication was also discontinued. The concomitant medications were maintained at the same dose levels till the end of the observation period that was the end of week 20. There was a steady improvement in CD symptoms in 18 patients (90%) who received wormwood in spite of tapering of steroids as shown by CDA-Index, IBDQ, HAMD, and VAS. After 8 weeks of treatment with wormwood there was almost complete remission of symptoms in 13 (65%) patients in this group as compared to none in the placebo group. This remission persisted till the end of the observation period that was week 20, and the addition of steroids was not necessary. In two (10%) patients did the re-starting of corticoids become necessary? On the other hand, the CD conditions of the patients who received the placebo deteriorated after the tapering of steroids, and re-starting steroids became necessary in 16 (80%) patients in this group after week 10. These results strongly suggest that wormwood has a steroid sparing effect. The improvements in HAMD scores indicate that wormwood also has an effect on the mood and quality of life of CD patients, which is not achieved by other standard medications.
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Affiliation(s)
- B Omer
- Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA
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Erem C, Tanakol R, Alagöl F, Omer B, Cetin O. Relationship of bone turnover parameters, endogenous hormones and vit D deficiency to hip fracture in elderly postmenopausal women. Int J Clin Pract 2002; 56:333-7. [PMID: 12137439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/25/2023] Open
Abstract
Hip fracture is one of the severest consequences of osteoporosis affecting elderly women, but abnormalities of bone turnover responsible for bone loss have not been clearly defined. This study evaluated the relationship of bone turnover parameters to hip fracture in postmenopausal elderly women. We also investigated the effects of endogenous hormones and vitamin D deficiency on osteoporotic hip fracture. The subjects were 21 osteoporotic patients with hip fracture (study group) and 20 healthy postmenopausal women (control group). We measured osteocalcin levels, total and bone alkaline phosphatase (T-ALP and B-ALP), calcitonin, intact parathyroid hormone (iPTH), serum 25 hydroxyvitamin D (25OHD), urinary free deoxypyridinoline (D-pyr) and cross-linked N-telopeptides of type 1 collagen (NTx) levels. Serum T-ALP and B-ALP levels in the study group were lower than those of the control group. The mean serum 25OHD levels in the study group were not significantly different from the control group, but in five cases the mean serum iPTH level was increased. The mean urinary NTx levels were significantly increased in the study group compared with the control group (p<0.05). There was no significant increase in urinary free D-pyr between the two groups. There was significant correlation between serum T-ALP levels and B-ALP levels and between serum iPTH levels and B-ALP levels. The mean serum SHBG level in the study group was higher than in the control group (p<0.05). These data suggest that postmenopausal hip fracture patients have biochemical evidence of decreased bone formation and increased bone resorption compared with postmenopausal healthy subjects. We suggest these abnormalities play a role in the decrease of bone mass and the consequent increase in bone fragility that characterises osteoporotic hip fracture.
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Affiliation(s)
- C Erem
- Department of Internal Medicine, Karadeniz Technical University Faculty of Medicine, Turkey
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Abstract
CYP 2E1 is involved in metabolic activation of carcinogenic N-nitrosamines, benzene, urethane and other low molecular weight compounds. CYP2E1 gene is present in the population in various polymorphic forms. We detected the RFLP of the human CYP2E1 gene with the restriction endonuclease PstI, RsaI and DraI in a group of 153 Turkish individuals. According to the results of the PstI/RsaI analysis, 96.07% of the subjects were of the c1/c1 genotype, and 3.93% were of the c1/c2 genotype. In the DraI RFLP analysis, 84.30% DD genotype, 15.03% CD genotype and 0.66% CC genotype were determined. The data obtained may be useful in epidemiological studies of the influence of CYP2E1 polymorphism on carcinogenesis.
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Affiliation(s)
- B Omer
- Istanbul University, Faculty of Medicine, Department of Biochemistry, Istanbul, Turkey.
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Cepok S, Jacobsen M, Schock S, Omer B, Jaekel S, Böddeker I, Oertel WH, Sommer N, Hemmer B. Patterns of cerebrospinal fluid pathology correlate with disease progression in multiple sclerosis. Brain 2001; 124:2169-76. [PMID: 11673319 DOI: 10.1093/brain/124.11.2169] [Citation(s) in RCA: 162] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Multiple sclerosis is a chronic inflammatory and demyelinating disease of the CNS with, as yet, an unknown aetiology. Temporal profile, intensity and treatment responses are highly variable in multiple sclerosis suggesting pathogenetic heterogeneity. This hypothesis has been supported by histopathological studies disclosing at least four different subtypes of acute demyelinating lesions. Although stratification of multiple sclerosis patients into these categories would be extremely helpful for clinical studies, this approach is impractical as it requires brain biopsy. In this study we investigated CSF cytology from 60 multiple sclerosis patients by flow cytometry. We identified different patterns of CSF cytology, which were independent of immunological parameters in the peripheral blood. The most variable CSF parameter was the B cell to monocyte ratio, which remained stable during different phases of disease in selected patients. The ratio correlated with disease progression but not with disability or disease duration in a retrospective, consecutive analysis. A high ratio (predominance of B cells) was associated with more rapid disease progression, whereas a low ratio (predominance of monocytes) was found in patients with slower progression. Our study demonstrates the existence and potential clinical relevance of different CSF cytology patterns. We hypothesize that CSF cytology patterns may reflect the heterogeneity in the pathogenesis of multiple sclerosis.
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Affiliation(s)
- S Cepok
- Clinical Neuroimmunology Group, Department of Neurology, Philipps-University, Marburg, Germany
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Omer B, Akköse A, Kolancí C, Oner P, Ozden I, Tuzlali S. Inhibition of mammary carcinogenesis in rats by parenteral high-dose vitamin E. J Natl Cancer Inst 1997; 89:972-3. [PMID: 9214680 DOI: 10.1093/jnci/89.13.972] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023] Open
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Oner P, Mutlu-Türkoğlu U, Omer B. Evaluation of the changes in serum lipid profile and ferritin concentrations in relation to body ascorbic acid status in healthy pre- and postmenopausal women. J Nutr Sci Vitaminol (Tokyo) 1997; 43:1-9. [PMID: 9151236 DOI: 10.3177/jnsv.43.1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The aim of this work was to study the relationship between body ascorbic acid (AA) status and serum lipid profile and ferritin concentrations in healthy pre- and postmenopausal women. The mean leukocyte and plasma ascorbate values in postmenopausal women were found to be significantly low but within acceptable ranges as compared to premenopausal women. According to these results, plasma and leukocyte AA concentrations decreased after the cessation of ovarian hormone production. In addition, significant increases in total cholesterol, triglyceride and LDL-cholesterol but a significant decrease in HDL-cholesterol were observed in postmenopausal women as compared to premenopausal women. A close positive relationship was found between plasma and leukocyte AA and body iron status in postmenopausal women. The findings were prominent especially in the subgroup of postmenopausal women with low body AA status. Thus, it is concluded that women having low body AA concentrations might have a predisposition for iron depletion.
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Affiliation(s)
- P Oner
- Department of Biochemistry, University of Istanbul, Turkey
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Omer B, Oner P, Manyasli M, Aktan M. Leukocyte arylsulphatase A activity in acute leukemia. Cancer Biochem Biophys 1994; 14:53-6. [PMID: 7796388] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Lysosomal arylsulphatase A of peripheral leukocytes from patients with acute lymphoblastic and myeloblastic leukemia and from healthy subjects, were studied. Arylsulphatase A activity of both types of leukemic cells was significantly higher than those of cells from healthy subjects. From our present observations, it can be concluded that estimation of lysosomal arylsulphatase A of leukocytes, may be of value clinically as a biochemical assay which can serve to demonstrate the presence of malignancy.
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Affiliation(s)
- B Omer
- Department of Biochemistry, Istanbul Medical Faculty, Istanbul University, Capa, Turkey
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Omer B, Oner P, Baysal K, Oz H. Effect of acetylsalicylic acid on liver plasma membrane Ca2+ ATPase activity. Pol J Pharmacol Pharm 1990; 42:441-6. [PMID: 2151533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
In the present study, the effects of low- and non-toxic high doses of acetylsalicylic acid (ASA) on liver plasma membrane Ca2+ ATPase activity and also on some membrane lipid components were investigated in rats. ASA was administered to rats by means of a gastric tube at doses of 50 mg/kg and 200 mg/kg, daily, for 30 days. Chronic oral administration of high dose of ASA resulted in significant increases in liver plasma membrane cholesterol and phospholipid levels, whereas the membrane lipids appeared not to be affected by low dose of ASA. Liver plasma membrane Ca2+ ATPase activity was found to be significantly inhibited following high dose of ASA treatment. Low dose of ASA administration caused a slight, but non-significant decrease in enzyme activity. It is concluded that the inhibition of Ca2+ ATPase activity produced by high dose of ASA treatment may be expected to cause Ca2+ accumulation in liver cells, thereby leading to the cell injury.
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Affiliation(s)
- B Omer
- Department of Biochemistry, Istanbul Medical Faculty, University of Istanbul, Turkey
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Hallac P, Oner P, Omer B. [The mechanism of intrahepatic cholestasis induced by oral contraceptives]. Istanbul Tip Fak Mecmuasi 1990; 53:70-4. [PMID: 12286868] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 04/19/2023]
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Eryürek FG, Sürmen E, Omer B, Altuğ T, Oner P, Deniz G. Modulation of gamma-glutamyl transpeptidase activity by dietary eicosapentaenoic acid and vitamin E in livers of rabbits on hypercholesterolemic diet. Res Commun Chem Pathol Pharmacol 1989; 65:389-92. [PMID: 2573119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Rabbits were fed high-cholesterol diets containing either eicosapentaenoic acid (EPA) or vitamin E at doses of 80 mg and 100 IU per day, respectively. Liver gamma-glutamyl transpeptidase (GGT) activity and liver cholesterol and phospholipid levels were determined following the administration of the diets for 45 days. The feeding of cholesterol produced the highest concentrations of cholesterol in livers accompanied with the elevated enzymatic activity. Addition of EPA to the diet dramatically reduced GGT activity to normal levels, whereas vitamin E administration caused only a slight reduction.
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Affiliation(s)
- F G Eryürek
- Department of Biochemistry, Istanbul Faculty of Medicine, University of Istanbul, Capa, Turkey
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Omer B, Eryürek F, Oner P, Baysal K. Liver gamma-glutamyl transpeptidase activity following chronic treatment with acetylsalicylic acid in rats. Enzyme 1989; 42:185-8. [PMID: 2576532 DOI: 10.1159/000469031] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
In the present study, rats were administered acetylsalicylic acid (ASA), at low and high doses, by means of a gastric tube for 30 days. Chronic administration of a high dose of ASA (200 mg/kg body weight) resulted in a significant increase in liver plasma membrane gamma-glutamyl transpeptidase activity, cholesterol, and phospholipid levels. The enzymatic activity and lipid levels appeared not to be affected by ASA when given at a lower dose (50 mg/kg body weight). The changes in the enzymatic activity of plasma membrane were positively correlated to membrane cholesterol content. These findings suggest that the hepatotoxicity of high doses of ASA should not be overlooked during clinical use of the drug.
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Affiliation(s)
- B Omer
- Department of Biochemistry, Istanbul Faculty of Medicine, University of Istanbul, Turkey
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