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Hopp AK, Teloni F, Bisceglie L, Gondrand C, Raith F, Nowak K, Muskalla L, Howald A, Pedrioli PGA, Johnsson K, Altmeyer M, Pedrioli DML, Hottiger MO. Mitochondrial NAD + Controls Nuclear ARTD1-Induced ADP-Ribosylation. Mol Cell 2021; 81:340-354.e5. [PMID: 33450210 PMCID: PMC7837215 DOI: 10.1016/j.molcel.2020.12.034] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2020] [Revised: 10/30/2020] [Accepted: 12/18/2020] [Indexed: 12/12/2022]
Abstract
In addition to its role as an electron transporter, mitochondrial nicotinamide adenine dinucleotide (NAD+) is an important co-factor for enzymatic reactions, including ADP-ribosylation. Although mitochondria harbor the most intra-cellular NAD+, mitochondrial ADP-ribosylation remains poorly understood. Here we provide evidence for mitochondrial ADP-ribosylation, which was identified using various methodologies including immunofluorescence, western blot, and mass spectrometry. We show that mitochondrial ADP-ribosylation reversibly increases in response to respiratory chain inhibition. Conversely, H2O2-induced oxidative stress reciprocally induces nuclear and reduces mitochondrial ADP-ribosylation. Elevated mitochondrial ADP-ribosylation, in turn, dampens H2O2-triggered nuclear ADP-ribosylation and increases MMS-induced ARTD1 chromatin retention. Interestingly, co-treatment of cells with the mitochondrial uncoupler FCCP decreases PARP inhibitor efficacy. Together, our results suggest that mitochondrial ADP-ribosylation is a dynamic cellular process that impacts nuclear ADP-ribosylation and provide evidence for a NAD+-mediated mitochondrial-nuclear crosstalk.
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Affiliation(s)
- Ann-Katrin Hopp
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland; Life Science Zurich Graduate School, Molecular Life Science Ph.D. Program, University of Zurich, 8057 Zurich, Switzerland
| | - Federico Teloni
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland; Life Science Zurich Graduate School, Molecular Life Science Ph.D. Program, University of Zurich, 8057 Zurich, Switzerland
| | - Lavinia Bisceglie
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland; Life Science Zurich Graduate School, Molecular Life Science Ph.D. Program, University of Zurich, 8057 Zurich, Switzerland
| | - Corentin Gondrand
- Department of Chemical Biology, Max Planck Institute for Medical Research, 69120 Heidelberg, Germany
| | - Fabio Raith
- Department of Chemical Biology, Max Planck Institute for Medical Research, 69120 Heidelberg, Germany; Faculty of Chemistry and Earth Sciences, University of Heidelberg, 69120 Heidelberg, Germany
| | - Kathrin Nowak
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland; Life Science Zurich Graduate School, Molecular Life Science Ph.D. Program, University of Zurich, 8057 Zurich, Switzerland
| | - Lukas Muskalla
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland; Life Science Zurich Graduate School, Cancer Biology Ph.D. Program, University of Zurich, 8057 Zurich
| | - Anna Howald
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland
| | - Patrick G A Pedrioli
- Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, 8093 Zurich, Switzerland; PHRT-CPAC, ETH Zurich, 8093 Zurich, Switzerland
| | - Kai Johnsson
- Department of Chemical Biology, Max Planck Institute for Medical Research, 69120 Heidelberg, Germany
| | - Matthias Altmeyer
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland
| | - Deena M Leslie Pedrioli
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland
| | - Michael O Hottiger
- Department of Molecular Mechanisms of Disease (DMMD), University of Zurich, 8057 Zurich, Switzerland.
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Yu Q, Pourmandi N, Xue L, Gondrand C, Fabritz S, Bardy D, Patiny L, Katsyuba E, Auwerx J, Johnsson K. A biosensor for measuring NAD + levels at the point of care. Nat Metab 2019; 1:1219-1225. [PMID: 32694678 DOI: 10.1038/s42255-019-0151-7] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/18/2019] [Accepted: 11/12/2019] [Indexed: 01/08/2023]
Abstract
The cellular level of nicotinamide adenine dinucleotide (NAD+), through its different functions, affects cellular metabolism and signalling1-3. A decrease in the NAD+ content has been associated with various pathologies and physiological aging4,5, while strategies to boost cellular NAD+ levels have been shown to be effective against age-related diseases in many animal models6. The link between decreased NAD+ levels and numerous pathologies and physiological aging has triggered the need for a simple quantification method for NAD+, ideally applicable at the point of care. Here, we introduce a bioluminescent biosensor for the rapid quantification of NAD+ levels in biological samples, which can be used either in laboratories or at the point of care. The biosensor is a semisynthetic, light-emitting sensor protein that changes the colour of emitted light from blue to red on binding of NAD+. This NAD+-dependent colour change enables the use of the biosensor in paper-based assays in which NAD+ is quantified by measuring the colour of the emitted light by using either a simple digital camera or a plate reader. We used the approach to quantify NAD+ levels in cell culture, tissue and blood samples, yielding results that agreed with those from standard testing methods. The same biosensor furthermore allows the quantification of NAD+-dependent enzymatic activities in blood samples, thus expanding its utility as a tool for point-of-care diagnostics.
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Affiliation(s)
- Qiuliyang Yu
- Department of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany
- Institute of Chemical Sciences and Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Narges Pourmandi
- Department of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany
| | - Lin Xue
- Department of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany
| | - Corentin Gondrand
- Department of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany
| | - Sebastian Fabritz
- Department of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany
| | - Daniel Bardy
- Clinical Chemistry Laboratory, Service of Biomedicine, University Hospital of Lausanne, Lausanne, Switzerland
| | - Luc Patiny
- Institute of Chemical Sciences and Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Elena Katsyuba
- Laboratory of Integrative Systems Physiology, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Nagi Biosciences, Lausanne, Switzerland
| | - Johan Auwerx
- Laboratory of Integrative Systems Physiology, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Kai Johnsson
- Department of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany.
- Institute of Chemical Sciences and Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
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Sallin O, Reymond L, Gondrand C, Raith F, Koch B, Johnsson K. Semisynthetic biosensors for mapping cellular concentrations of nicotinamide adenine dinucleotides. eLife 2018; 7:32638. [PMID: 29809136 PMCID: PMC5990361 DOI: 10.7554/elife.32638] [Citation(s) in RCA: 73] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Accepted: 05/09/2018] [Indexed: 12/18/2022] Open
Abstract
We introduce a new class of semisynthetic fluorescent biosensors for the quantification of free nicotinamide adenine dinucleotide (NAD+) and ratios of reduced to oxidized nicotinamide adenine dinucleotide phosphate (NADPH/NADP+) in live cells. Sensing is based on controlling the spatial proximity of two synthetic fluorophores by binding of NAD(P) to the protein component of the sensor. The sensors possess a large dynamic range, can be excited at long wavelengths, are pH-insensitive, have tunable response range and can be localized in different organelles. Ratios of free NADPH/NADP+ are found to be higher in mitochondria compared to those found in the nucleus and the cytosol. By recording free NADPH/NADP+ ratios in response to changes in environmental conditions, we observe how cells can react to such changes by adapting metabolic fluxes. Finally, we demonstrate how a comparison of the effect of drugs on cellular NAD(P) levels can be used to probe mechanisms of action.
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Affiliation(s)
- Olivier Sallin
- École Polytechnique Fédérale de Lausanne, Institute of Chemical Sciences and Engineering, Lausanne, Switzerland
| | - Luc Reymond
- École Polytechnique Fédérale de Lausanne, Institute of Chemical Sciences and Engineering, Lausanne, Switzerland.,National Centre of Competence in Research in Chemical Biology, Lausanne, Switzerland
| | - Corentin Gondrand
- Department of Chemical Biology, Max-Planck-Institute for Medical Research, Heidelberg, Germany
| | - Fabio Raith
- Department of Chemical Biology, Max-Planck-Institute for Medical Research, Heidelberg, Germany
| | - Birgit Koch
- Department of Chemical Biology, Max-Planck-Institute for Medical Research, Heidelberg, Germany
| | - Kai Johnsson
- École Polytechnique Fédérale de Lausanne, Institute of Chemical Sciences and Engineering, Lausanne, Switzerland.,Department of Chemical Biology, Max-Planck-Institute for Medical Research, Heidelberg, Germany.,National Centre of Competence in Research in Chemical Biology, Lausanne, Switzerland
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Gondrand C, Touti F, Godart E, Berezhanskyy Y, Jeanneau E, Maurin P, Hasserodt J. Spring‐Loaded Iron(II) Complexes as Magnetogenic Probes Reporting on a Chemical Analyte in Water. Eur J Inorg Chem 2015. [DOI: 10.1002/ejic.201403183] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Corentin Gondrand
- Laboratoire de Chimie, UMR CNRS UCBL 5182, Université de Lyon–ENS de Lyon, 46, allée d'Italie, 69364 Lyon CEDEX 07, France, http://www.ens‐lyon.fr/CHIMIE/
| | - Fayçal Touti
- Laboratoire de Chimie, UMR CNRS UCBL 5182, Université de Lyon–ENS de Lyon, 46, allée d'Italie, 69364 Lyon CEDEX 07, France, http://www.ens‐lyon.fr/CHIMIE/
| | - Estelle Godart
- Laboratoire de Chimie, UMR CNRS UCBL 5182, Université de Lyon–ENS de Lyon, 46, allée d'Italie, 69364 Lyon CEDEX 07, France, http://www.ens‐lyon.fr/CHIMIE/
| | - Yevgen Berezhanskyy
- Laboratoire de Chimie, UMR CNRS UCBL 5182, Université de Lyon–ENS de Lyon, 46, allée d'Italie, 69364 Lyon CEDEX 07, France, http://www.ens‐lyon.fr/CHIMIE/
| | - Erwann Jeanneau
- Centre de Diffractométrie Henri Longchambon, Université de Lyon–UCBL, Site CLEA, Bâtiment ISA, 3ème étage 5, rue de la Doua, 69100 Villeurbanne, France
| | - Philippe Maurin
- Laboratoire de Chimie, UMR CNRS UCBL 5182, Université de Lyon–ENS de Lyon, 46, allée d'Italie, 69364 Lyon CEDEX 07, France, http://www.ens‐lyon.fr/CHIMIE/
| | - Jens Hasserodt
- Laboratoire de Chimie, UMR CNRS UCBL 5182, Université de Lyon–ENS de Lyon, 46, allée d'Italie, 69364 Lyon CEDEX 07, France, http://www.ens‐lyon.fr/CHIMIE/
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Wang J, Gondrand C, Touti F, Hasserodt J. A pair of highly biotolerated diamagnetic and paramagnetic iron(ii) complexes displaying electroneutrality. Dalton Trans 2015; 44:15391-5. [DOI: 10.1039/c5dt02192h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A pair of structurally analogous macrocyclic iron(ii) complexes with a magnetic off-on relationship is reported that exhibit electroneutrality at neutral pH and high stability in physiological media.
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Affiliation(s)
- J. Wang
- Laboratoire de Chimie
- Université de Lyon – ENS
- Lyon
- France
- School of Chemistry and Molecular Engineering
| | - C. Gondrand
- Laboratoire de Chimie
- Université de Lyon – ENS
- Lyon
- France
| | - F. Touti
- Laboratoire de Chimie
- Université de Lyon – ENS
- Lyon
- France
| | - J. Hasserodt
- Laboratoire de Chimie
- Université de Lyon – ENS
- Lyon
- France
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