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Kim JY, Hyun DY, Nam D, Shin HJ, Jung J, Cho SY, Jung K, Hwang D, Lee SW, Kim JY. Proteogenomic Analysis of Human Uterine Cervical Cancer (UCC) Reveals Treatment-Resistant Subtypes of UCC. Int J Radiat Oncol Biol Phys 2023; 117:S22. [PMID: 37784455 DOI: 10.1016/j.ijrobp.2023.06.277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
PURPOSE/OBJECTIVE(S) Locally advanced uterine cervical cancer (UCC) is treated by radiotherapy with concurrent chemotherapy, but heterogenous treatment responses are frequently observed. To better optimize therapeutic options based on molecular signatures, we performed proteogenomic analysis of UCC. MATERIALS/METHODS UCC tissue and blood samples were collected from patients who underwent primary radiotherapy ± chemotherapy at the National Cancer Center (NCC) in Korea from July 2004 to March 2020. Most samples were obtained via biopsy. Genomic DNA for WES was isolated from frozen biopsy tumor tissues and peripheral blood buffy-coat of patients. Both global proteome and phosphoproteome were analyzed using liquid chromatography-tandem mass spectrometry (LC-MS/MS). Whole exome sequencing, RNA sequencing, global proteomics and phosphoproteomics were performed using 253, 337, and 147 cervical cancer samples, respectively. Patient-derived xenograft were established using intratongue implantation using 2 primary cell lines from sub3 and sub5, and flow cytometric analysis was performed. RESULTS Fourteen significantly mutated genes (SMG) were found in our study cohort which include 5 newly identified SMGs. Mutation-phosphorylation analysis revealed association with apoptosis and actin cytoskeleton pathway. Proteogenomic analysis defined 6 molecular subtypes of UCC. Of those, 3 subtypes (i.e., Sub3, Sub5 and Sub6) were associated with treatment-resistant phenotypes. The cell-type deconvolution analysis suggested activated stroma with activation of cancer-associated fibroblast in Sub 3, while Sub5 showed low levels of activated stroma and high levels of myeloid immune cells. FACS analysis of UCC mouse models established from these 2 radio-resistant primary cell lines showed high component of PDGFRA+CAF infiltration in Sub 3, and high level of PVR+CD45+ immune cells mainly composed of polymorphonuclear myeloid-derived suppressor cells (PMN-MDSC) in Sub5. For Sub6, genes and/or protein signatures represented mucin-related processes (e.g., mucin glycosylation/sugar metabolism), which are linked to metastasis-associated Tn antigen production. CONCLUSION The proteogenomic analysis thus suggests potential targets for radiotherapy-resistant subtypes of UCC; secretory factors from activated stroma and cancer-associated fibroblast (Sub3); RHOA signaling, PVR, and PMN-MDSCs (Sub5), and keratin/chondroitin sulfate proteoglycan and Tn antigen production (Sub6). Our study shows the importance of proteogenomic analysis in unveiling the subtype specific molecular pathways of UCC that are beyond reach by genomic data alone. The validity of our molecular pathway and cellular signatures linking these pathways should be further validated through detailed functional experiments and in larger UCC cohorts.
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Affiliation(s)
- J Y Kim
- National Cancer Center, Goyang, Korea, Republic of (South) Korea
| | - D Y Hyun
- School of Biological Sciences, Seoul National University, Seoul, Korea, Republic of (South) Korea
| | - D Nam
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul, Korea, Republic of (South) Korea
| | - H J Shin
- Research Institute and Hospital, National Cancer Center, Korea, Goyang, Korea, Republic of (South) Korea
| | - J Jung
- Department of Anatomy and Cell Biology and Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea, Republic of (South) Korea
| | - S Y Cho
- Research Institute and Hospital, National Cancer Center, Korea, Goyang-si, Korea, Republic of (South) Korea
| | - K Jung
- Department of Anatomy and Cell Biology and Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea, Republic of (South) Korea
| | - D Hwang
- School of Biological Sciences, Seoul National University, Seoul, Korea, Republic of (South) Korea
| | - S W Lee
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul, Korea, Republic of (South) Korea
| | - J Y Kim
- Research Institute and Hospital, National Cancer Center, Korea, Goyang-si, Korea, Republic of (South) Korea
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Renaud-Picard B, Daigneault T, Berra G, Olivia M, Fortunato J, Hwang D, Pal P, Juvet S, Martinu T. Airway Epithelial Cell Apoptosis in Acute Cellular Rejection (ACR) and Chronic Lung Allograft Dysfunction (CLAD). J Heart Lung Transplant 2023. [DOI: 10.1016/j.healun.2023.02.1401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023] Open
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Beber S, Moshkelgosha S, Cheung M, Hedley D, Levy L, Samuels J, Renaud-Picard B, Hwang D, Martinu T, Juvet S. Exploration of Intragraft T Cell Phenotypes in Minimal Acute Cellular Rejection (ACR) Using Imaging Mass Cytometry (IMC). J Heart Lung Transplant 2023. [DOI: 10.1016/j.healun.2023.02.1475] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023] Open
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Kim HS, Kang J, Yun JP, Park KW, Hwang D, Han JK, Yang HM, Kang HJ, Koo BK. Prasugrel-based de-escalation vs. conventional therapy after percutaneous coronary intervention in ACS patients according to the renal function. Eur Heart J 2023. [DOI: 10.1093/eurheartj/ehac779.062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/26/2023] Open
Abstract
Abstract
Funding Acknowledgements
Type of funding sources: Private company. Main funding source(s): A consortium of six companies in Korea (Daiichi Sankyo, Boston Scientific, Terumo, Biotronik, Qualitech Korea, and Dio).
Background
Patients with coronary artery disease and impaired renal function are at higher risk for both bleeding and ischemic adverse events after percutaneous coronary intervention (PCI).
Purpose
We assessed the efficacy and safety of a prasugrel based de-escalation strategy in patients with impaired renal function.
Methods
We conducted a post-hoc analysis of the HOST-REDUCE-POLYTECH-ACS study. Patients with available estimated glomerular filtration rate (eGFR) (n=2,311) were categorized into three groups. (high eGFR: ≥90 mL/min; intermediate eGFR: ≥60 and <90 mL/min; low eGFR: <60 mL/min). The endpoints were bleeding outcomes (Bleeding Academic Research Consortium type 2, or higher), ischemic outcomes (cardiovascular death, myocardial infarction, stent thrombosis, repeat revascularization, and ischemic stroke), and net adverse clinical events (all cause death, BARC 2 or greater bleeding, MI, stent thrombosis, repeat revascularization, and ischemic stroke) at 1 year follow-up. The hazard ratio (HR) and 95% Confidence interval (CI) were calculated from the multivariate Cox proportional hazard regression analysis. Covariates that were considered clinically meaningful were included. The probability risk ratio was obtained by dividing ischemic hazard function from the bleeding hazard function.
Results
With respect to net adverse clinical events, prasugrel de-escalation was beneficial regardless of baseline renal function (p for interaction = 0.508). The relative reduction in bleeding risk from prasugrel de-escalation was higher in the low eGFR group compared with that from both the intermediate and high eGFR groups (relative reduction: 64% [HR 0.36, 95% CI 0.15–0.83] vs. 50% [HR 0.50, 95% CI 0.28-0.90] and 52% [HR 0.48, 95% CI 0.21-1.13] for low, intermediate, and high eGFR groups, p for interaction=0.646). Ischemic risk from prasgurel de-escalation was not significant in all eGFR groups ([HR 1.18, 95% CI 0.47-2.98], [HR 0.95, 95% CI 0.53-1.69], and [HR 0.61, 95% CI 0.26-1.39)], respectively, p for interaction=0.119). The probability risk ratio was highest in low eGFR group (1.06 vs. 1.26 vs. 1.36, for high, intermediate, and low eGFR groups, respectively, p for trend<0.001), suggesting higher relative bleeding risk above ischemic risk. Within those randomized to the de-escalation strategy, the mean probability risk ratio was not significantly different according to renal function (0.89, vs. 0.84 vs. 0.80 respectively, p for trend = 0.053), which was in contrast to those randomized to the conventional strategy where the mean probability risk ratio increased significantly as renal function decreased (1.24 vs. 1.67 vs. 1.94 respectively, p for trend<0.001).
Conclusion
The beneficial effect of prasugrel-based de-escalation strategy was consistent regardless of the baseline renal function, which was mostly driven by a reduction in bleeding risk which was greatest in those with low eGFR.
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Affiliation(s)
- H S Kim
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - J Kang
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - J P Yun
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - K W Park
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - D Hwang
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - J K Han
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - H M Yang
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - H J Kang
- Seoul National University Hospital , Seoul , Korea (Republic of)
| | - B K Koo
- Seoul National University Hospital , Seoul , Korea (Republic of)
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thunnissen E, Borczuk A, Beasly M, Tsao M, Kerr K, Dacic S, Minami Y, Nicholson A, Lissenberg-Witte B, Roden A, Papotti M, Poleri C, Travis B, Jain D, Pelosi G, Chung J, Botling J, Bubendorf L, Mino-Kenudson M, Motoi N, Lantuejoul S, Cooper W, Hwang D, Moreira A, Noguchi M. MA12.07 Defining Morphologic Features of Invasion in Pulmonarynon-Mucinousadenocarcinoma with Lepidic Growth. J Thorac Oncol 2022. [DOI: 10.1016/j.jtho.2022.07.146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Repajic M, Mittelstein D, Zaman N, Zhu T, Hwang D, Cen S, Lei X, Varghese B, Duddalwar V, Katz M, Vairavamurthy J, Schroff S. Abstract No. 105 Use of radiomics to predict outcomes in prostatic artery embolization. J Vasc Interv Radiol 2022. [DOI: 10.1016/j.jvir.2022.03.186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
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7
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Renaud-Picard B, Cheung M, Moshkelgosha S, Berra G, Hwang D, Hedley D, Juvet S, Martinu T. Imaging Mass Cytometry for Detailed Cellular and Spatial Characterization of Chronic Lung Allograft Dysfunction (CLAD). J Heart Lung Transplant 2022. [DOI: 10.1016/j.healun.2022.01.246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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Park SH, Kang J, Hwang D, Zhang J, Han JK, Yang HM, Park KW, Kang HJ, Kim HS, Koo BK. A novel index reflecting both anatomical and physiologic parameters in coronary artery disease, the FFR adjusted SYNTAX score (FaSs). Eur Heart J 2021. [DOI: 10.1093/eurheartj/ehab724.1145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Background
Various physiology-based indices have been proposed to predict adverse clinical events in patients with coronary artery disease (CAD), such as the sum of three vessel-fractional flow reserve (3v-FFR), and the functional SYNTAX score (fSS). However, these values could not fully reflect the anatomical factors, which remains as a barrier for clinical application of these indices.
Purpose
To propose a novel index which can reflect both anatomical and physiologic features in CAD patients, and evaluate the additional predictive value for cardiovascular adverse events compared to previous indices.
Methods
For an index which can reflect both anatomical and physiologic features, we proposed the FFR adjusted SYNTAX score (FaSs). The FaSs is calculated by adding the product of the SYNTAX score and `1-FFR', for all three major coronary arteries. Among the 1136 patients who enrolled at 3V FFR-FRIENDS study, we investigated 866 patients, after excluding those who had missing variables. The 3v-FFR, fSS and FaSs were calculated, derived from the baseline FFR and SYNTAX score. Patients were divided into two groups according to the median value of each index. The primary endpoint was major adverse cardiac events (MACE, a composite of cardiac death, myocardial infarction and ischemia-driven revascularization) at 2 years follow-up.
Results
Among the total population, MACE occurred in 35 (4.04%) patients. Using the median value in a multivariable COX regression model, only FaSs was associated with an increased risk of MACE, (Hazard Ratio [HR] 5.256, 95% confidence interval [CI] 2.014–13.720), while 3v-FFR (HR 1.383, 95% CI 0.685–2.790) and fSS (HR 1.640, 95% CI 0.830–3.243) were not significantly associated with a higher risk of MACE. This was also observed in the Kaplan Meier survival curve analysis (log-rank p value: p<0.001 for FaSs, 0.153 for 3v-FFR, and 0.061 for fSS; Figure 1) The sensitivity and specificity of the FaSs was 85.7% and 51.6%, which was higher compared to the 3v-FFR (62.9% and 49.3%, respectively) and fSS (57.1% and 58.5%, respectively). When these indices were combined with clinical risk factors (age, sex, hypertension, diabetes, hyperlipidemia, chronic renal failure, LVEF<40%), FaSs was superior compared with 3v-FFR and fSS assessed in regards of the predictive accuracy for MACE (Figure 2).
Conclusion
The FaSs, which is a novel index calculated by a formula using the SYNTAX score and FFR, showed a superior predictive value for MACE compared to previous indices. Our results confirm the importance of considering both anatomical and physiologic parameters in evaluating the patient's risk for cardiovascular adverse outcomes.
Funding Acknowledgement
Type of funding sources: None.
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Affiliation(s)
- S H Park
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - J Kang
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - D Hwang
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - J Zhang
- The Second Affiliated Hospital, Zhejiang University School of Medicine, Department of Cardiology, Hangzhou, China
| | - J K Han
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - H M Yang
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - K W Park
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - H J Kang
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - H S Kim
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
| | - B K Koo
- Seoul National University Hospital, Internal Medicine, Seoul, Korea (Republic of)
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Hong Y, Hwang D, Yang C, Cheng S, Aala W, Harn H, Onoufriadis A, Lu K, McGrath J, Hsu C. 360 Pathogenic role of specific macrophage and fibroblast subpopulations in acne keloidalis identified by single cell RNA sequencing. J Invest Dermatol 2021. [DOI: 10.1016/j.jid.2021.08.369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Lau S, Perdrizet K, Giffoni M.M. Mata D, Fung A, Liu G, Bradbury P, Shepherd F, Sacher A, Sheffield B, Hwang D, Tsao M, Cheng S, Cheema P, Leighl N. P45.05 Sequencing of PD-1 Inhibitors and TKIs in Metastatic NSCLC with MET Exon 14 Skipping Mutation May Influence Survival. J Thorac Oncol 2021. [DOI: 10.1016/j.jtho.2021.08.473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Kang SY, Hwang D, Shin S, Park J, Kim M, Rahman MDH, Rahman MA, Ko SG, Kim B. Potential of Bioactive Food Components against Gastric Cancer: Insights into Molecular Mechanism and Therapeutic Targets. Cancers (Basel) 2021; 13:cancers13184502. [PMID: 34572730 PMCID: PMC8469857 DOI: 10.3390/cancers13184502] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Revised: 09/02/2021] [Accepted: 09/03/2021] [Indexed: 12/18/2022] Open
Abstract
Gastric cancer, also known as stomach cancer, is a cancer that develops from the lining of the stomach. Accumulated evidence and epidemiological studies have indicated that bioactive food components from natural products play an important role in gastric cancer prevention and treatment, although its mechanism of action has not yet been elucidated. Particularly, experimental studies have shown that natural bioactive food products display a protective effect against gastric cancer via numerous molecular mechanisms, such as suppression of cell metastasis, anti-angiogenesis, inhibition of cell proliferation, induction of apoptosis, and modulation of autophagy. Chemotherapy remains the standard treatment for advanced gastric cancer along with surgery, radiation therapy, hormone therapy, as well as immunotherapy, and its adverse side effects including neutropenia, stomatitis, mucositis, diarrhea, nausea, and emesis are well documented. However, administration of naturally occurring bioactive phytochemical food components could increase the efficacy of gastric chemotherapy and other chemotherapeutic resistance. Additionally, several studies have suggested that bioactive food components with structural stability, potential bioavailability, and powerful bioactivity are important to develop novel treatment strategies for gastric cancer management, which may minimize the adverse effects. Therefore, the purpose of this review is to summarize the potential therapeutic effects of natural bioactive food products on the prevention and treatment of gastric cancer with intensive molecular mechanisms of action, bioavailability, and safety efficacy.
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Affiliation(s)
- Seog Young Kang
- College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea; (S.Y.K.); (D.H.); (S.S.); (J.P.); (M.A.R.)
| | - Dongwon Hwang
- College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea; (S.Y.K.); (D.H.); (S.S.); (J.P.); (M.A.R.)
| | - Soyoung Shin
- College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea; (S.Y.K.); (D.H.); (S.S.); (J.P.); (M.A.R.)
| | - Jinju Park
- College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea; (S.Y.K.); (D.H.); (S.S.); (J.P.); (M.A.R.)
| | - Myoungchan Kim
- Department of Pathology, College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea;
| | - MD. Hasanur Rahman
- Department of Biotechnology and Genetic Engineering, Bangabandhu Sheikh Mujibur Rahman Science and Technology University, Gopalganj 8100, Bangladesh;
| | - Md. Ataur Rahman
- College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea; (S.Y.K.); (D.H.); (S.S.); (J.P.); (M.A.R.)
- Department of Pathology, College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea;
- Korean Medicine-Based Drug Repositioning Cancer Research Center, College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea;
| | - Seong-Gyu Ko
- Korean Medicine-Based Drug Repositioning Cancer Research Center, College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea;
| | - Bonglee Kim
- College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea; (S.Y.K.); (D.H.); (S.S.); (J.P.); (M.A.R.)
- Department of Pathology, College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea;
- Korean Medicine-Based Drug Repositioning Cancer Research Center, College of Korean Medicine, Kyung Hee University, Hoegidong Dongdaemungu, Seoul 05253, Korea;
- Correspondence:
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Kim JY, Hwang D, Jang M, Rhee CS, Han DH. Clinical effectiveness of house dust mite immunotherapy in mono- versus poly-sensitised patients with allergic rhinitis: a systematic review and meta-analysis. Rhinology 2021; 59:352-359. [PMID: 34180463 DOI: 10.4193/rhin20.588] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Selecting an appropriate allergen-specific immunotherapy (AIT) regimen for polysensitised allergic rhinitis (AR) patients is challenging for clinicians. Although previous studies showed comparable effectiveness of single-allergen AIT with house dust mite (HDM) extract between monosensitised and polysensitised AR patients, there is no systematic review and meta-analysis demonstrating the comparable effectiveness of HDM AIT. In this meta-analysis, we analysed nine studies to compare the clinical effectiveness of HDM AIT. The primary outcome was nasal symptom score and secondary outcomes were medication and quality of life scores. The changes in nasal symptom score after HDM AIT did not significantly differ between monosensitised and polysensitised patients. The clinical effectiveness of HDM AIT regarding medication and quality of life score was not significantly different between monosensitised and polysensitised patients). In conclusion, single-allergen AIT with HDM extract showed comparable clinical effectiveness between polysensitised and monosensitised patients with AR.
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Affiliation(s)
- J Y Kim
- Department of Otorhinolaryngology "Head and Neck Surgery, Ilsan Hospital, Dongguk University, Goyang, Gyeonggi, Korea 2 Interdisciplinary Program of Medical Informatics, Seoul National University College of Medicine, Seoul, Korea
| | - D Hwang
- Department of Internal Medicine and Cardiovascular Center, Seoul National University Hospital, Seoul, Korea
| | - M Jang
- Medical Research Collaborating Center, Seoul National University Hospital, Seoul, Korea
| | - C S Rhee
- Department of Otorhinolaryngology, Seoul National University College of Medicine, Seoul, Korea; Graduate School of Immunology, Seoul National University College of Medicine, Seoul, Korea; Institute of Allergy and Clinical Immunology, and Sensory Organ Research Institute, Seoul National University Biomedical Research Center, Seoul, Korea
| | - D H Han
- Department of Otorhinolaryngology, Seoul National University College of Medicine, Seoul, Korea
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Watanabe T, Guan Z, Horie M, Joe B, Juan M, Buhari H, Hwang D, Kolls J, Liu M, Keshavjee S, Juvet S, Juvet S, Martinu T. IL-17 Receptor on Donor Cells Regulates Acute and Chronic Lung Allograft Rejection Potentiated by Repeated Endotoxin Inhalations. J Heart Lung Transplant 2021. [DOI: 10.1016/j.healun.2021.01.1883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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Gutta S, Acharya J, Shiroishi MS, Hwang D, Nayak KS. Improved Glioma Grading Using Deep Convolutional Neural Networks. AJNR Am J Neuroradiol 2021; 42:233-239. [PMID: 33303522 PMCID: PMC7872170 DOI: 10.3174/ajnr.a6882] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2020] [Accepted: 09/02/2020] [Indexed: 12/15/2022]
Abstract
BACKGROUND AND PURPOSE Accurate determination of glioma grade leads to improved treatment planning. The criterion standard for glioma grading is invasive tissue sampling. Recently, radiomic features have shown excellent potential in glioma-grade prediction. These features may not fully exploit the underlying information in MR images. The objective of this study was to investigate the performance of features learned by a convolutional neural network compared with standard radiomic features for grade prediction. MATERIALS AND METHODS A total of 237 patients with gliomas were included in this study. All images were resampled, registered, skull-stripped, and segmented to extract the tumors. The learned features from the trained convolutional neural network were used for grade prediction. The performance of the proposed method was compared with standard machine learning approaches, support vector machine, random forests, and gradient boosting trained with radiomic features. RESULTS The experimental results demonstrate that using learned features extracted from the convolutional neural network achieves an average accuracy of 87%, outperforming the methods considering radiomic features alone. The top-performing machine learning model is gradient boosting with an average accuracy of 64%. Thus, there is a 23% improvement in accuracy, and it is an efficient technique for grade prediction. CONCLUSIONS Convolutional neural networks are able to learn discriminating features automatically, and these features provide added value for grading gliomas. The proposed framework may provide substantial improvement in glioma-grade prediction; however, further validation is needed.
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Affiliation(s)
- S Gutta
- From the Ming Hsieh Department of Electrical and Computer Engineering (S.G., K.S.N.), Viterbi School of Engineering
| | - J Acharya
- Department of Radiology (J.A., M.S.S., D.H., K.S.N.), Keck School of Medicine, University of Southern California, Los Angeles, California
| | - M S Shiroishi
- Department of Radiology (J.A., M.S.S., D.H., K.S.N.), Keck School of Medicine, University of Southern California, Los Angeles, California
| | - D Hwang
- Department of Radiology (J.A., M.S.S., D.H., K.S.N.), Keck School of Medicine, University of Southern California, Los Angeles, California
| | - K S Nayak
- From the Ming Hsieh Department of Electrical and Computer Engineering (S.G., K.S.N.), Viterbi School of Engineering
- Department of Radiology (J.A., M.S.S., D.H., K.S.N.), Keck School of Medicine, University of Southern California, Los Angeles, California
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Hamaya R, Mittleman M, Hoshino M, Kanaji Y, Lee J, Hwang D, Zhang J, Chen S, Koo B, Kakuta T. Prognostic value of pre-revascularization fractional flow reserve mediated by the post-revascularization level: a causal mediation analysis. Eur Heart J 2020. [DOI: 10.1093/ehjci/ehaa946.1275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Background
The prognostic value of pre-percutaneous coronary intervention (PCI) fractional flow reserve (FFR) can depend on that of the post-PCI FFR and their interaction. To correctly interpret the prognostic value of pre-PCI FFR, it is essential to understand to what extent the relationship between pre-PCI FFR and clinical outcome is explained by pre-PCI FFR-related post-PCI FFR.
Purpose
The aim of this study is to investigate the extent to which post-PCI FFR mediates the relationship between pre-PCI FFR and vessel-related outcomes using a global, multicenter collaboration registry.
Methods
Patient data from 4 global FFR registries were pooled and 1488 patients with pre-PCI FFR ≤0.80 were analyzed. The primary outcome was target vessel failure (TVF) during 2-years of follow-up. We evaluated the extent to which post-PCI FFR <0.90 mediated the association between pre-PCI FFR <0.75 and TVF employing a causal mediation analysis in a counterfactual framework.
Results
Among 1488 patients, the mean (standard deviation) age was 63.5 (9.9) years and 78% (1161 patients) were male. The median (IQR) pre-PCI and post-PCI FFR were 0.71 (0.62–0.76) and 0.88 (0.83–0.92), respectively. The direct effect of low pre-PCI FFR (<0.75) on TVF was significantly elevated (OR: 1.81, 95% CI: 1.03–3.18, p=0.038), and was not mediated by post-PCI FFR<0.90 (indirect effect, OR: 1.01, 95% CI: 0.98–1.05, p=0.39). In the model, post-PCI FFR explained only 2.2% of the association between pre-PCI FFR and TVF. The subgroup analysis implicated that the prognostic information of pre-PCI FFR was mainly for diffuse lesions.
Conclusions
The prognostic information of pre-PCI FFR did not greatly depend on the results of PCI assessed by post-PCI FFR. Pre-PCI FFR, as a prognostic marker, may mainly reflect the global atherosclerotic burden of the artery, not the extent of the modifiable epicardial stenosis, thus providing independent information from post-PCI FFR.
Interpretation
Funding Acknowledgement
Type of funding source: None
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Affiliation(s)
- R Hamaya
- Harvard T.H. Chan School of Public Health, Epidemiology, Boston, United States of America
| | - M Mittleman
- Harvard T.H. Chan School of Public Health, Epidemiology, Boston, United States of America
| | - M Hoshino
- Tsuchiura Kyodo Hospital, cardiology, Tsuchiura, Japan
| | - Y Kanaji
- Tsuchiura Kyodo Hospital, cardiology, Tsuchiura, Japan
| | - J Lee
- Samsung Medical Center, Division of Cardiology, Seoul, Korea (Republic of)
| | - D Hwang
- Seoul National University Hospital, Department of Internal Medicine and Cardiovascular Center, Seoul, Korea (Republic of)
| | - J Zhang
- Seoul National University Hospital, Department of Internal Medicine and Cardiovascular Center, Seoul, Korea (Republic of)
| | - S Chen
- Nanjing Medical University, Cardiology, Nanjing, China
| | - B Koo
- Seoul National University Hospital, Department of Internal Medicine and Cardiovascular Center, Seoul, Korea (Republic of)
| | - T Kakuta
- Tsuchiura Kyodo Hospital, cardiology, Tsuchiura, Japan
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16
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Jones R, Casbard A, Carucci M, Smith J, Ingarfield K, Gee J, Hudson Z, Alchami F, Hayward L, Hickish T, Hwang D, McAdam K, Spensley S, Waters S, Wheatley D, Beresford M. LBA20 Vandetanib plus fulvestrant versus placebo plus fulvestrant after relapse or progression on an aromatase inhibitor in metastatic ER positive breast cancer (FURVA): A randomised, double-blind, placebo-controlled, phase II trial. Ann Oncol 2020. [DOI: 10.1016/j.annonc.2020.08.2248] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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17
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Renaud-Picard B, Berra G, Hwang D, Miyamoto E, Berry G, Pal P, Juvet S, Keshavjee S, Martinu T. Spectrum of Chronic Lung Allograft Pathology in Human Lung Transplantation. J Heart Lung Transplant 2020. [DOI: 10.1016/j.healun.2020.01.1253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022] Open
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18
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Kawashima M, Oliver J, Watanabe T, Huang N, Konoeda C, Oishi H, Hirayama S, Hwang D, Keshavjee S, Juvet S, Martinu T. Surgeon- and Experience-Dependent Pathological Variations in Minor-Mismatched Mouse Lung Transplantation. J Heart Lung Transplant 2020. [DOI: 10.1016/j.healun.2020.01.021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022] Open
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19
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Watanabe T, Guan Z, Horie M, Joe B, Juan M, Buhari H, Hwang D, Kolls J, Liu M, Keshavjee S, Juvet S, Martinu T. IL-17 Receptor on Donor Cells Regulates Acute and Chronic Lung Allograft Rejection Potentiated by Repeated Endotoxin Inhalations. J Heart Lung Transplant 2020. [DOI: 10.1016/j.healun.2020.01.796] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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20
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Jagadeesh D, Tsai D, Wei W, Wagner-Johnston N, Xie E, Berg S, Smith S, Koff J, Barot S, Hwang D, Kim S, Venugopal P, Fenske T, Sriram D, David K, Santapuram P, Reddy N, Dharnidharka V, Evens A. POST-TRANSPLANT LYMPHOPROLIFERATIVE DISORDER (PTLD) AFTER SOLID ORGAN TRANSPLANT (SOT): SURVIVAL AND PROGNOSTICATION AMONG 570 PATIENTS (PTS) TREATED IN THE MODERN ERA. Hematol Oncol 2019. [DOI: 10.1002/hon.116_2629] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- D. Jagadeesh
- Hematology and Medical Oncology; Cleveland Clinic; Cleveland United States
| | - D. Tsai
- Hematology/Oncology; University of Pennsylvania; Philadelphia United States
| | - W. Wei
- Hematology and Medical Oncology; Cleveland Clinic; Cleveland United States
| | - N. Wagner-Johnston
- Hematology and Oncology; Johns Hopkins Medical Institution; Baltimore United States
| | - E. Xie
- Hematology and Oncology; Johns Hopkins Medical Institution; Baltimore United States
| | - S. Berg
- Hematology and Oncology; Loyola University Medical Center; Melrose Park United States
| | - S.E. Smith
- Hematology and Oncology; Loyola University Medical Center; Melrose Park United States
| | - J.L. Koff
- Hematology and Medical Oncology; Emory University; Atlanta United States
| | - S. Barot
- Hematology and Medical Oncology; Cleveland Clinic; Cleveland United States
| | - D. Hwang
- Hematology and Oncology; Loyola University Medical Center; Melrose Park United States
| | - S. Kim
- Hematology and Oncology; Rush University Medical Center; Chicago United States
| | - P. Venugopal
- Hematology and Oncology; Rush University Medical Center; Chicago United States
| | - T. Fenske
- Hematology and Oncology; Medical College of Wisconsin; Milwaukee United States
| | - D. Sriram
- Hematology and Oncology; Medical College of Wisconsin; Milwaukee United States
| | - K. David
- Hematology and Oncology; Rutgers Cancer Institute of New Jersey; New Brunswick United States
| | - P. Santapuram
- Department of Medicine; Vanderbilt University Medical Center; Nashville United States
| | - N. Reddy
- Department of Medicine; Vanderbilt University Medical Center; Nashville United States
| | - V. Dharnidharka
- Pediatric Nephrology; Hypertension and Pheresis, Washington University School of Medicine & St. Louis Children's Hospital; St. Louis United States
| | - A.M. Evens
- Hematology and Oncology; Rutgers Cancer Institute of New Jersey; New Brunswick United States
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21
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Hwang D, Kim M, Park H, Jeong MI, Jung W, Kim B. Natural Products and Acute Myeloid Leukemia: A Review Highlighting Mechanisms of Action. Nutrients 2019; 11:nu11051010. [PMID: 31058874 PMCID: PMC6567155 DOI: 10.3390/nu11051010] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2019] [Revised: 04/28/2019] [Accepted: 04/29/2019] [Indexed: 12/22/2022] Open
Abstract
Recent findings have shown great potential of alternative interventions such as immunotherapy and natural products for acute myeloid leukemia (AML). This study aims to review the anti-AML effect of various natural compounds. Natural compounds were classified into five groups: alkaloids, carotenoids, nitrogen-containing compounds, organosulfur compounds or phenolics based on each compound’s chemical properties. Fifty-eight studies were collected and reviewed in this article. Phenolics are the most abundant group to have an apoptotic effect over AML cells, while other groups have also shown significant apoptotic effects. Some compounds induced apoptosis by regulating unique mechanism like human telomerase reverse transcriptase (hTERT) or laminin receptor (67LR), while others modified caspases, poly (adp-ribose) polymerase (PARP) and p53. Further study is required to identify side-effects of potent compounds and the synergistic effects of combination of two or more natural compounds or existing conventional anti-AML drugs to treat this dreadful disease.
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Affiliation(s)
- Dongwon Hwang
- College of Korean Medicine, Kyung Hee University, 1 Hoegi-dong, Dongdaemun-gu, Seoul 130-701, Korea.
| | - Minsun Kim
- College of Korean Medicine, Kyung Hee University, 1 Hoegi-dong, Dongdaemun-gu, Seoul 130-701, Korea.
| | - Hyejin Park
- College of Korean Medicine, Kyung Hee University, 1 Hoegi-dong, Dongdaemun-gu, Seoul 130-701, Korea.
| | - Myung In Jeong
- College of Korean Medicine, Kyung Hee University, 1 Hoegi-dong, Dongdaemun-gu, Seoul 130-701, Korea.
| | - Woojin Jung
- College of Korean Medicine, Kyung Hee University, 1 Hoegi-dong, Dongdaemun-gu, Seoul 130-701, Korea.
| | - Bonglee Kim
- College of Korean Medicine, Kyung Hee University, 1 Hoegi-dong, Dongdaemun-gu, Seoul 130-701, Korea.
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22
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Hwang D, Kim S, Hong H. Substance P improves MSC-mediated RPE regeneration by modulating PDGF-BB. Cytotherapy 2019. [DOI: 10.1016/j.jcyt.2019.03.467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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23
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Watanabe T, Martinu T, Boonstra K, Umana J, Horie M, Guan Z, Hwang D, Liu M, Keshavjee S, Juvet S. Recipient CD103+ Classical Dendritic Cells Enhance Acute Rejection in Response to Airway Inflammation after Mouse Lung Transplantation. J Heart Lung Transplant 2019. [DOI: 10.1016/j.healun.2019.01.370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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24
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Gomes B, Ribeiro R, Ramadan K, Galasso M, Ali A, Watanabe Y, Paradiso E, Meineri M, Chan H, Zhang Y, Hwang D, Slutsky A, Fan E, Liu M, Keshavjee S, Cypel M, del Sorbo L. Effect of PEEP-Induced Alveolar Recruitment on Lung Injury during Extracorporeal Membrane Oxygenation for ARDS. J Heart Lung Transplant 2019. [DOI: 10.1016/j.healun.2019.01.851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
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25
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Miyamoto E, Martinu T, Hwang D, Ohsumi A, Boonstra K, Joe B, Umana M, Liu M, Cypel M, Keshavjee S, Juvet S. Intrapulmonary Immune Regulation by Pre-Transplant Infusion of Recipient-Derived Regulatory T Cells in a Rat Model of Ex Vivo Lung Perfusion Followed by Transplantation. J Heart Lung Transplant 2019. [DOI: 10.1016/j.healun.2019.01.084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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26
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Watanabe T, Martinu T, Boonstra K, Horie M, Guan Z, Joe B, Bei K, Chruscinski A, Hwang D, Liu M, Keshavjee S, Juvet S. B Cells Drive Chronic Lung Allograft Rejection after Ischemia-Reperfusion Injury in Mouse Lung Transplantation. J Heart Lung Transplant 2019. [DOI: 10.1016/j.healun.2019.01.191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
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27
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Bin B, Lee S, Bhin J, Irié T, Kim S, Seo J, Mishima K, Lee T, Hwang D, Fukada T, Cho E. The epithelial zinc transporter
ZIP
10 epigenetically regulates human epidermal homeostasis by modulating histone acetyltransferase activity. Br J Dermatol 2018; 180:869-880. [DOI: 10.1111/bjd.17339] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/15/2018] [Indexed: 12/17/2022]
Affiliation(s)
- B.‐H. Bin
- Basic Research & Innovation Division AmorePacific R&D Unit Yongin 17014 Republic of Korea
- Department of Biological Sciences Ajou University Suwon 16499Republic of Korea
| | - S.‐H. Lee
- Biosolution Corporation Seoul 01811Republic of Korea
| | - J. Bhin
- Division of Molecular Carcinogenesis the Netherlands Cancer Institute Amsterdam 1066 CXthe Netherlands
| | - T. Irié
- Division of Pathology Department of Oral Diagnostic Sciences School of Dentistry Showa University Tokyo 142‐8666Japan
- Division of Anatomical and Cellular Pathology Department of Pathology Iwate Medical University Iwate 028‐3694Japan
| | - S. Kim
- Biosolution Corporation Seoul 01811Republic of Korea
| | - J. Seo
- Beauty in Longevity Science Research Division AmorePacific R&D Unit Yongin 17014 Republic of Korea
| | - K. Mishima
- Division of Pathology Department of Oral Diagnostic Sciences School of Dentistry Showa University Tokyo 142‐8666Japan
| | - T.R. Lee
- Basic Research & Innovation Division AmorePacific R&D Unit Yongin 17014 Republic of Korea
| | - D. Hwang
- Center for Systems Biology of Plant Senescence and Life History Institute for Basic Science Daegu 42988Republic of Korea
| | - T. Fukada
- Faculty of Pharmaceutical Sciences Tokushima Bunri University Tokushima 770‐8055 Japan
| | - E.‐G. Cho
- Basic Research & Innovation Division AmorePacific R&D Unit Yongin 17014 Republic of Korea
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28
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Perdrizet K, Stockley T, Tsao M, Morganstein J, Kamel-Reid S, Ranich L, Shepherd F, Bradbury P, Liu G, Hwang D, Pal P, Schwock J, Boerner S, Sacher A, Law J, Leighl N. P2.03-03 Upfront Next Generation Sequencing in NSCLC: A Publicly Funded Perspective. J Thorac Oncol 2018. [DOI: 10.1016/j.jtho.2018.08.1190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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29
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Mahadevan N, Sholl L, Hwang D. P3.09-12 Molecular and Immunohistochemical Correlates of RB1 Inactivation in Small Cell Lung Carcinoma. J Thorac Oncol 2018. [DOI: 10.1016/j.jtho.2018.08.1781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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30
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Sung M, Nadjafi M, Santos G, Le L, Hwang D, Tsao M, Leighl N. P2.01-94 Diagnostic Patterns of Non-Small Cell Lung Cancer at Princess Margaret Cancer Centre. J Thorac Oncol 2018. [DOI: 10.1016/j.jtho.2018.08.1148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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31
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Affiliation(s)
- Jinwoo Park
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
| | - Hyungtae Cho
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
| | - Dongwon Hwang
- Green Carbon Catalysis Research Group, Korea Research Institute of Chemical Technology (KRICT), 141Gajeongro, Yuseong, Daejeon 34114, Republic of Korea
| | - Seungnam Kim
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
| | - Il Moon
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
| | - Myungjun Kim
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
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32
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Hwang D, Ahn S, Kim B, Bok S. How can biomechanical foot orthosis affect gait in arthritis with hallux valgus? Ann Phys Rehabil Med 2018. [DOI: 10.1016/j.rehab.2018.05.927] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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33
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Cole N, Hwang D, Jankowska P, Hamilton C. Head and Neck Contouring Peer Review. Clin Oncol (R Coll Radiol) 2018; 30:393. [DOI: 10.1016/j.clon.2018.01.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2017] [Revised: 01/16/2018] [Accepted: 01/29/2018] [Indexed: 10/18/2022]
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34
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Arguelles J, Becker K, Kim J, Chang J, Montoya E, Dewitte J, Villalpando C, Woodrum R, Henry L, Takehara J, Hwang D. 0486 Comparing Three Home Sleep Apnea Testing Devices to Polysomnography: Assessing Respiratory, Sleep-Wake, and Body Position Data. Sleep 2018. [DOI: 10.1093/sleep/zsy061.485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | | | - J Kim
- Kaiser Permanente, Fontana, CA
| | - J Chang
- Kaiser Permanente, Fontana, CA
| | | | | | | | | | - L Henry
- Kaiser Permanente, Fontana, CA
| | | | - D Hwang
- Kaiser Permanente, Tustin, CA
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35
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Arguelles J, Kim J, Becker K, Chang J, Dewitte J, Montoya E, Villalpando C, Woodrum R, Henry L, Takehara J, Hwang D. 0487 Comparing Three Home Sleep Apnea Testing Devices to Polysomnography: Evaluating Diagnostic Rates for Obstructive Sleep Apnea. Sleep 2018. [DOI: 10.1093/sleep/zsy061.486] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - J Kim
- Kaiser Permanente, Fontana, CA
| | | | - J Chang
- Kaiser Permanente, Fontana, CA
| | | | | | | | | | - L Henry
- Kaiser Permanente, Fontana, CA
| | | | - D Hwang
- Kaiser Permanente, Tustin, CA
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36
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Chang J, Liang J, Becker K, Kim J, Woodrum R, Vega D, Dewitte J, Arguelles J, Derose S, Crocker M, Benjafield A, Hwang D. 1077 Optimizing Message Delivery in Tele-monitoring to Patients at 90 Days: The Tele-OSA Randomized Clinical Trial. Sleep 2018. [DOI: 10.1093/sleep/zsy061.1076] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- J Chang
- Kaiser Permanente, Fontana, CA
| | - J Liang
- Kaiser Permanente, Fontana, CA
| | | | - J Kim
- Kaiser Permanente, Fontana, CA
| | | | - D Vega
- Kaiser Permanente, Fontana, CA
| | | | | | | | - M Crocker
- ResMed Science Center, San Diego, CA
| | | | - D Hwang
- Kaiser Permanente, Tustin, CA
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37
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Chang J, Liang J, Becker K, Kim J, Woodrum R, Vega D, Dewitte J, Arguelles J, Derose S, Crocker M, Benjafield A, Hwang D. 1048 Impact of Automated CPAP Tele-monitoring on CPAP Adherence At 2 Years: Follow-up From The Tele-OSA Randomized Clinical Trial. Sleep 2018. [DOI: 10.1093/sleep/zsy061.1047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- J Chang
- Kaiser Permanente, Fontana, CA
| | - J Liang
- Kaiser Permanente, Fontana, CA
| | | | - J Kim
- Kaiser Permanente, Fontana, CA
| | | | - D Vega
- Kaiser Permanente, Fontana, CA
| | | | | | | | - M Crocker
- ResMed Science Center, San Diego, CA
| | | | - D Hwang
- Kaiser Permanente, Tustin, CA
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38
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Chang J, Arguelles J, Kim J, Becker K, Woodrum R, Vega D, Kim J, Demerjian G, Thompson F, Bautista M, Hwang D. 0552 Evaluating the Use of a Titratable Pre-Fabricated Mandibular Advancement Device to Predict Response to a Custom Device. Sleep 2018. [DOI: 10.1093/sleep/zsy061.551] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- J Chang
- Kaiser Permanente, Fontana, CA
| | | | - J Kim
- Kaiser Permanente, Fontana, CA
| | | | | | - D Vega
- Kaiser Permanente, Fontana, CA
| | - J Kim
- Kaiser Permanente, Fontana, CA
| | | | | | | | - D Hwang
- Kaiser Permanente, Tustin, CA
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39
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Koutsokera A, Benden C, Cantu E, Chambers D, Cypel M, Edelman J, Emtiazjoo A, Fisher A, Greenland J, Hayes D, Hwang D, Keller B, Lease E, Perch M, Sato M, Todd J, Verleden S, von der Thüsen J, Weight S, Keshavjee S, Martinu T. Bronchoalveolar Lavage Practices in Lung Transplantation: Results of a Large-scale International Survey. J Heart Lung Transplant 2018. [DOI: 10.1016/j.healun.2018.01.482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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40
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Levy L, Klement W, Huszti E, Ahmed M, Tikkanen J, Zamel R, Azad S, Fiset P, Hwang D, Tomlinson G, Keshavjee S, Singer L, Juvet S, Martinu T. Untreated Subclinical Minimal Acute Rejection Does Not Increase the Risk for Chronic Lung Allograft Dysfunction and Death After Lung Transplantation. J Heart Lung Transplant 2018. [DOI: 10.1016/j.healun.2018.01.1146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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41
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Watanabe T, Boonstra K, Horie M, Konoeda C, Guan Z, Maxim M, Hwang D, Liu M, Keshavjee S, Juvet S, Martinu T. Repeated Episodes of Airway Inflammation Augment Acute Rejection and Fibrosis in a Mouse Lung Transplant Model. J Heart Lung Transplant 2018. [DOI: 10.1016/j.healun.2018.01.185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
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42
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Watanabe T, Martinu T, Boonstra K, Horie M, Guan Z, Hwang D, Keshavjee S, Juvet S. Alloimmunity Contributes to and is Enhanced by Acute Lung Injury Following Prolonged Ischemia in Mouse Orthotopic Lung Transplantation. J Heart Lung Transplant 2018. [DOI: 10.1016/j.healun.2018.01.525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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43
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Guibert N, Tsukada H, Hwang D, Bale T, Chambers E, Ulrich B, Paweletz C, Sholl L, Oxnard G. MA 20.14 Genotyping of Lung Cancer Using Cell-Free DNA (cfDNA) from Cytologic Supernatant (CSN). J Thorac Oncol 2017. [DOI: 10.1016/j.jtho.2017.09.653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Hong D, Arguelles J, Montoya E, Villalpando C, Henry L, Chang J, Becker K, Kim J, Woodrum R, Hwang D. 0492 COMPARING THREE HOME SLEEP APNEA TESTING DEVICES TO POLYSOMNOGRAPHY: SIMULTANEOUS AND MULTI-NIGHT ASSESSMENTS. Sleep 2017. [DOI: 10.1093/sleepj/zsx050.491] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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Chang J, Kim J, Becker K, Benjafield A, Crocker M, Woodrum R, Arguelles J, Derose S, Hwang D. 0509 IMPACT OF AUTOMATED WEB-EDUCATION AND CPAP TELE-MONITORING ON CPAP ADHERENCE AT 3 MONTHS AND 1 YEAR: THE TELE-OSA RANDOMIZED CLINICAL TRIAL. Sleep 2017. [DOI: 10.1093/sleepj/zsx050.508] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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Chang J, Derose S, Benjafield A, Crocker M, Kim J, Becker K, Woodrum R, Arguelles J, Hwang D. 0541 ACCEPTANCE AND IMPACT OF TELEMEDICINE IN PATIENT SUB-GROUPS WITH OBSTRUCTIVE SLEEP APNEA: ANALYSIS FROM THE TELE-OSA RANDOMIZED CLINICAL TRIAL. Sleep 2017. [DOI: 10.1093/sleepj/zsx050.540] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Patel A, Mukherjee A, Hwang D, Ensor J, Patel TA, Chang JC, Rodriguez AA. Abstract P1-02-06: Serial monitoring of circulating tumor DNA in patients with metastatic breast cancer. Cancer Res 2017. [DOI: 10.1158/1538-7445.sabcs16-p1-02-06] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Background: For patients with MBC, there is currently no evidence that changing therapy on the basis of biomarker results improves outcome. Clinical benefit of treatment is defined as complete response, objective response, or stable disease as determined by RECIST criteria on radiological evaluation. Serial measurements of serum biomarkers such as CA2729 and CTCs have proven unsuccessful in predicting clinical benefit. Circulating tumor DNA(ctDNA) has emerged as a potential biomarker that may predict response to therapy or progression of disease. The present retrospective study was conducted to evaluate the relationship between change in ctDNA with clinical benefit determined by clinical and radiological evaluations of patients with MBC patients.
Methods: We conducted a retrospective, single-institutional study to determine if serial monitoring of ctDNA allele frequency levels predict clinical benefit of a treatment. 55 patients with measurable MBC who had serial monitoring of ctDNA between August 2014 and May 2016 were included. The median age was 55.9 (27–94) years). Clinical outcomes were determined as per standard guidelines. The analysis was performed on all cases that had serial measurements of ctDNA with no change in therapy in between and the repeat blood draw was done within 30 days of repeat radiographic evaluation. The dataset contained 125 observations from 48 unique patients. The relationship between the change in ctDNA and clinical benefit was analyzed using a generalized linear model with a random subject effect to account for the intrapatient dependence occurring from obtaining multiple evaluations from the same patient. A logit link function was used akin to logistic regression and a compound symmetric correlation structure was assumed.
Results: 68.8% of the cases were hormone receptor-positive, 18.8% HER2-positive, and 27.1% TNBC. The treatments received were 58.4% hormonal therapy, 31.2% chemotherapy, 26.4% included anti-HER2 therapy, 2 cases were on targeted therapy, and 1 case was not on any treatment. Three patients had stage 4 disease in complete remission. ctDNA analysis was repeated on average 4 days prior to radiological evaluation. The average time between repeat assessments was 108.5 days. 93% of the patients had a genomic alteration detected at some point during their course of disease. The most common mutations detected were TP53 41.7%, PIK3CA 35.4%, ESR1 18.8%, and ERBB2 amplifications 6.3%. A dichotomized change in ctDNA is a significant predictor of clinical benefit (p < 0.0001). The intrapatient correlation is estimated to be 0.273 for the transformed variable. The model yields a predicted probability of clinical benefit of 26.9% when the increase in ctDNA is greater than or equal to 0.5 and when the increase in ctDNA is less than 0.5, the a predicted probability of clinical benefit is 78.4%. The concordance of change in ctDNA and change in CA 27-29 was 76.2%.
Conclusions: Serial evaluation of serum ctDNA may be useful to evaluate molecular response to treatment which may correlate with clinical benefit and potentially guide treatment decisions. Early indication that a chosen therapy is not effective may lead to avoidance of overtreatment and initiation of an alternative regimen. Further, prospective studies are needed.
Citation Format: Patel A, Mukherjee A, Hwang D, Ensor J, Patel TA, Chang JC, Rodriguez AA. Serial monitoring of circulating tumor DNA in patients with metastatic breast cancer [abstract]. In: Proceedings of the 2016 San Antonio Breast Cancer Symposium; 2016 Dec 6-10; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2017;77(4 Suppl):Abstract nr P1-02-06.
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Affiliation(s)
- A Patel
- Houston Methodist Cancer Center, Houston, TX
| | - A Mukherjee
- Houston Methodist Cancer Center, Houston, TX
| | - D Hwang
- Houston Methodist Cancer Center, Houston, TX
| | - J Ensor
- Houston Methodist Cancer Center, Houston, TX
| | - TA Patel
- Houston Methodist Cancer Center, Houston, TX
| | - JC Chang
- Houston Methodist Cancer Center, Houston, TX
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Lam WY, Cheung MK, Fung WY, Law PT, Kam KM, Au CH, Nong WY, Hwang D, Chan RC, Kwan HS, Tsui SK. Metagenomics of tuberculosis infection in Hong Kong. Hong Kong Med J 2016; 22 Suppl 7:15-17. [PMID: 29941686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023] Open
Affiliation(s)
- W Y Lam
- School of Biomedical Sciences, The Chinese University of Hong Kong
| | - M K Cheung
- School of Life Sciences, The Chinese University of Hong Kong
| | - W Yw Fung
- School of Biomedical Sciences, The Chinese University of Hong Kong
| | - P Tw Law
- School of Life Sciences, The Chinese University of Hong Kong
| | - K M Kam
- Centre for Health Protection, Department of Health
| | - C H Au
- School of Life Sciences, The Chinese University of Hong Kong
| | - W Y Nong
- School of Life Sciences, The Chinese University of Hong Kong
| | - D Hwang
- Department of Laboratory Medicine and Pathology, University of Toronto, Canada
| | - R Cy Chan
- Department of Microbiology, The Chinese University of Hong Kong
| | - H S Kwan
- School of Life Sciences, The Chinese University of Hong Kong
| | - S Kw Tsui
- School of Biomedical Sciences, The Chinese University of Hong Kong
- Hong Kong Bioinformatics Centre, The Chinese University of Hong Kong
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Mant S, Chiu K, Norris T, Fraser I, Collinson M, Roy A, Cogill G, Hamilton C, Hwang D. The peninsula multicentre head and neck cancer audit: time from surgery to adjuvant radiotherapy. Clin Oncol (R Coll Radiol) 2016. [DOI: 10.1016/j.clon.2016.04.032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Kanou T, Pacheco S, Chen M, Zehong G, Bai X, Hwang D, Cypel M, Keshavjee S, Liu M. A Novel Nanoscale Formulation of Hydrophobic Src Tyrosine Kinase Inhibitor PP2 Prevents Pulmonary Ischemia Reperfusion Induced Acute Lung Injury. J Heart Lung Transplant 2016. [DOI: 10.1016/j.healun.2016.01.502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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