1
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Pylkkänen R, Werner D, Bishoyi A, Weil D, Scoppola E, Wagermaier W, Safeer A, Bahri S, Baldus M, Paananen A, Penttilä M, Szilvay GR, Mohammadi P. The complex structure of Fomes fomentarius represents an architectural design for high-performance ultralightweight materials. Sci Adv 2023; 9:eade5417. [PMID: 36812306 PMCID: PMC9946349 DOI: 10.1126/sciadv.ade5417] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 01/20/2023] [Indexed: 06/18/2023]
Abstract
High strength, hardness, and fracture toughness are mechanical properties that are not commonly associated with the fleshy body of a fungus. Here, we show with detailed structural, chemical, and mechanical characterization that Fomes fomentarius is an exception, and its architectural design is a source of inspiration for an emerging class of ultralightweight high-performance materials. Our findings reveal that F. fomentarius is a functionally graded material with three distinct layers that undergo multiscale hierarchical self-assembly. Mycelium is the primary component in all layers. However, in each layer, mycelium exhibits a very distinct microstructure with unique preferential orientation, aspect ratio, density, and branch length. We also show that an extracellular matrix acts as a reinforcing adhesive that differs in each layer in terms of quantity, polymeric content, and interconnectivity. These findings demonstrate how the synergistic interplay of the aforementioned features results in distinct mechanical properties for each layer.
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Affiliation(s)
- Robert Pylkkänen
- VTT Technical Research Centre of Finland Ltd., Espoo, FI-02044 VTT, Finland
- Department of Bioproducts and Biosystems, School of Chemical Engineering, Aalto University, FI-00076 Aalto, Finland
| | - Daniel Werner
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, D-14476 Potsdam, Germany
| | - Ajit Bishoyi
- NMR Spectroscopy, Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH Utrecht, Netherlands
| | - Dominik Weil
- KLA-Tencor GmbH, Moritzburger Weg 67, Dresden 01109, Germany
| | - Ernesto Scoppola
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, D-14476 Potsdam, Germany
| | - Wolfgang Wagermaier
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, D-14476 Potsdam, Germany
| | - Adil Safeer
- NMR Spectroscopy, Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH Utrecht, Netherlands
| | - Salima Bahri
- NMR Spectroscopy, Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH Utrecht, Netherlands
| | - Marc Baldus
- NMR Spectroscopy, Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH Utrecht, Netherlands
| | - Arja Paananen
- VTT Technical Research Centre of Finland Ltd., Espoo, FI-02044 VTT, Finland
| | - Merja Penttilä
- VTT Technical Research Centre of Finland Ltd., Espoo, FI-02044 VTT, Finland
- Department of Bioproducts and Biosystems, School of Chemical Engineering, Aalto University, FI-00076 Aalto, Finland
| | - Géza R. Szilvay
- VTT Technical Research Centre of Finland Ltd., Espoo, FI-02044 VTT, Finland
| | - Pezhman Mohammadi
- VTT Technical Research Centre of Finland Ltd., Espoo, FI-02044 VTT, Finland
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2
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Paananen A, Weich S, Szilvay GR, Leitner M, Tappura K, Ebner A. Quantifying biomolecular hydrophobicity: Single molecule force spectroscopy of class II hydrophobins. J Biol Chem 2021; 296:100728. [PMID: 33933454 PMCID: PMC8164047 DOI: 10.1016/j.jbc.2021.100728] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 04/25/2021] [Accepted: 04/28/2021] [Indexed: 11/30/2022] Open
Abstract
Hydrophobins are surface-active proteins produced by filamentous fungi. The amphiphilic structure of hydrophobins is very compact, containing a distinct hydrophobic patch on one side of the molecule, locked by four intramolecular disulfide bridges. Hydrophobins form dimers and multimers in solution to shield these hydrophobic patches from water exposure. Multimer formation in solution is dynamic, and hydrophobin monomers can be exchanged between multimers. Unlike class I hydrophobins, class II hydrophobins assemble into highly ordered films at the air-water interface. In order to increase our understanding of the strength and nature of the interaction between hydrophobins, we used atomic force microscopy for single molecule force spectroscopy to explore the molecular interaction forces between class II hydrophobins from Trichoderma reesei under different environmental conditions. A genetically engineered hydrophobin variant, NCys-HFBI, enabled covalent attachment of proteins to the apex of the atomic force microscopy cantilever tip and sample surfaces in controlled orientation with sufficient freedom of movement to measure molecular forces between hydrophobic patches. The measured rupture force between two assembled hydrophobins was ∼31 pN, at a loading rate of 500 pN/s. The results indicated stronger interaction between hydrophobins and hydrophobic surfaces than between two assembling hydrophobin molecules. Furthermore, this interaction was stable under different environmental conditions, which demonstrates the dominance of hydrophobicity in hydrophobin-hydrophobin interactions. This is the first time that interaction forces between hydrophobin molecules, and also between naturally occurring hydrophobic surfaces, have been measured directly at a single-molecule level.
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Affiliation(s)
- Arja Paananen
- Industrial Biotechnology and Food, VTT Technical Research Centre of Finland Ltd, Espoo, Finland.
| | - Sabine Weich
- Department of Applied Experimental Biophysics, Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria
| | - Géza R Szilvay
- Industrial Biotechnology and Food, VTT Technical Research Centre of Finland Ltd, Espoo, Finland
| | - Michael Leitner
- Department of Applied Experimental Biophysics, Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria
| | - Kirsi Tappura
- Industrial Biotechnology and Food, VTT Technical Research Centre of Finland Ltd, Espoo, Finland
| | - Andreas Ebner
- Department of Applied Experimental Biophysics, Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria.
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3
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Rischer H, Szilvay GR, Oksman-Caldentey KM. Cellular agriculture — industrial biotechnology for food and materials. Curr Opin Biotechnol 2020; 61:128-134. [DOI: 10.1016/j.copbio.2019.12.003] [Citation(s) in RCA: 68] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Revised: 12/03/2019] [Accepted: 12/09/2019] [Indexed: 12/13/2022]
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4
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Li B, Wang X, Li Y, Paananen A, Szilvay GR, Qin M, Wang W, Cao Y. Single-Molecule Force Spectroscopy Reveals Self-Assembly Enhanced Surface Binding of Hydrophobins. Chemistry 2018; 24:9224-9228. [PMID: 29687928 DOI: 10.1002/chem.201801730] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2018] [Indexed: 01/26/2023]
Abstract
Hydrophobins have raised lots of interest as powerful surface adhesives. However, it remains largely unexplored how their strong and versatile surface adhesion is linked to their unique amphiphilic structural features. Here, we develop an AFM-based single-molecule force spectroscopy assay to quantitatively measure the binding strength of hydrophobin to various types of surfaces both in isolation and in preformed protein films. We find that individual class II hydrophobins (HFBI) bind strongly to hydrophobic surfaces but weakly to hydrophilic ones. After self-assembly into protein films, they show much stronger binding strength to both surfaces due to the cooperativity of different interactions at nanoscale. Such self-assembly enhanced surface binding may serve as a general design principle for synthetic bioactive adhesives.
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Affiliation(s)
- Bing Li
- Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing, 210093, P. R. China
| | - Xin Wang
- Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing, 210093, P. R. China
| | - Ying Li
- Collaborative Innovation Center of Atmospheric Environment and Equipment Technology, Jiangsu Key Laboratory of Atmospheric Environment Monitoring and Pollution Control, School of Environmental Science and Engineering, Nanjing University of Information Science & Technology, Nanjing, Jiangsu, 210044, P. R. China
| | - Arja Paananen
- Industrial Biotechnology, VTT Technical Research Centre of Finland Ltd, 02044 VTT, Espoo, Finland
| | - Géza R Szilvay
- Industrial Biotechnology, VTT Technical Research Centre of Finland Ltd, 02044 VTT, Espoo, Finland
| | - Meng Qin
- Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing, 210093, P. R. China
| | - Wei Wang
- Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing, 210093, P. R. China
| | - Yi Cao
- Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing, 210093, P. R. China
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5
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Griffo A, Hähl H, Grandthyll S, Müller F, Paananen A, Ilmén M, Szilvay GR, Landowski CP, Penttilä M, Jacobs K, Laaksonen P. Single-Molecule Force Spectroscopy Study on Modular Resilin Fusion Protein. ACS Omega 2017; 2:6906-6915. [PMID: 31457277 PMCID: PMC6644949 DOI: 10.1021/acsomega.7b01133] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Accepted: 09/26/2017] [Indexed: 05/05/2023]
Abstract
The adhesive and mechanical properties of a modular fusion protein consisting of two different types of binding units linked together via a flexible resilin-like-polypeptide domain are quantified. The adhesive domains have been constructed from fungal cellulose-binding modules (CBMs) and an amphiphilic hydrophobin HFBI. This study is carried out by single-molecule force spectroscopy, which enables stretching of single molecules. The fusion proteins are designed to self-assemble on the cellulose surface, leading into the submonolayer of proteins having the HFBI pointing away from the surface. A hydrophobic atomic force microscopy (AFM) tip can be employed for contacting and lifting the single fusion protein from the HFBI-functionalized terminus by the hydrophobic interaction between the tip surface and the hydrophobic patch of the HFBI. The work of rupture, contour length at rupture and the adhesion forces of the amphiphilic end domains are evaluated under aqueous environment at different pHs.
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Affiliation(s)
- Alessandra Griffo
- Department
of Bioproducts and Biosystems BIO, Aalto University, P.O. Box 16100, FI-00076 Aalto, Finland
| | - Hendrik Hähl
- Department
of Experimental Physics, Saarland University, 66123 Saarbrücken, Germany
| | - Samuel Grandthyll
- Department
of Experimental Physics, Saarland University, 66123 Saarbrücken, Germany
| | - Frank Müller
- Department
of Experimental Physics, Saarland University, 66123 Saarbrücken, Germany
| | - Arja Paananen
- VTT
Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, FI-02044 Espoo, Finland
| | - Marja Ilmén
- VTT
Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, FI-02044 Espoo, Finland
| | - Géza R. Szilvay
- VTT
Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, FI-02044 Espoo, Finland
| | | | - Merja Penttilä
- Department
of Bioproducts and Biosystems BIO, Aalto University, P.O. Box 16100, FI-00076 Aalto, Finland
- VTT
Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, FI-02044 Espoo, Finland
| | - Karin Jacobs
- Department
of Experimental Physics, Saarland University, 66123 Saarbrücken, Germany
| | - Päivi Laaksonen
- Department
of Bioproducts and Biosystems BIO, Aalto University, P.O. Box 16100, FI-00076 Aalto, Finland
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6
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Meister K, Roeters SJ, Paananen A, Woutersen S, Versluis J, Szilvay GR, Bakker HJ. Observation of pH-Induced Protein Reorientation at the Water Surface. J Phys Chem Lett 2017; 8:1772-1776. [PMID: 28345915 PMCID: PMC5451149 DOI: 10.1021/acs.jpclett.7b00394] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2017] [Accepted: 03/27/2017] [Indexed: 05/23/2023]
Abstract
Hydrophobins are surface-active proteins that form a hydrophobic, water-repelling film around aerial fungal structures. They have a compact, particle-like structure, in which hydrophilic and hydrophobic regions are spatially separated. This surface property renders them amphiphilic and is reminiscent of synthetic Janus particles. Here we report surface-specific chiral and nonchiral vibrational sum-frequency generation spectroscopy (VSFG) measurements of hydrophobins adsorbed to their natural place of action, the air-water interface. We observe that hydrophobin molecules undergo a reversible change in orientation (tilt) at the interface when the pH is varied. We explain this local orientation toggle from the modification of the interprotein interactions and the interaction of hydrophobin with the water solvent, following the pH-induced change of the charge state of particular amino acids.
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Affiliation(s)
- Konrad Meister
- AMOLF, Science Park 104, 1098XG Amsterdam, The Netherlands
| | - Steven J. Roeters
- Van
’t Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Arja Paananen
- VTT
Technical Research Centre of Finland Ltd., PO. Box 1000, FI-02044 VTT Espoo, Finland
| | - Sander Woutersen
- Van
’t Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Jan Versluis
- AMOLF, Science Park 104, 1098XG Amsterdam, The Netherlands
| | - Géza R. Szilvay
- VTT
Technical Research Centre of Finland Ltd., PO. Box 1000, FI-02044 VTT Espoo, Finland
| | - Huib J. Bakker
- AMOLF, Science Park 104, 1098XG Amsterdam, The Netherlands
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7
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Grunér MS, Paananen A, Szilvay GR, Linder MB. The dynamics of multimer formation of the amphiphilic hydrophobin protein HFBII. Colloids Surf B Biointerfaces 2017; 155:111-117. [PMID: 28415028 DOI: 10.1016/j.colsurfb.2017.03.057] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2016] [Revised: 12/30/2016] [Accepted: 03/27/2017] [Indexed: 10/19/2022]
Abstract
Hydrophobins are surface-active proteins produced by filamentous fungi. They have amphiphilic structures and form multimers in aqueous solution to shield their hydrophobic regions. The proteins rearrange at interfaces and self-assemble into films that can show a very high degree of structural order. Little is known on dynamics of multimer interactions in solution and how this is affected by other components. In this work we examine the multimer dynamics by stopped-flow fluorescence measurements and Förster Resonance Energy Transfer (FRET) using the class II hydrophobin HFBII. The half-life of exchange in the multimer state was 0.9s at 22°C with an activation energy of 92kJ/mol. The multimer exchange process of HFBII was shown to be significantly affected by the closely related HFBI hydrophobin, lowering both activation energy and half-life for exchange. Lower molecular weight surfactants interacted in very selective ways, but other surface active proteins did not influence the rates of exchange. The results indicate that the multimer formation is driven by specific molecular interactions that distinguish different hydrophobins from each other.
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Affiliation(s)
- M S Grunér
- Department of Bioproducts and Biosystems, Aalto University, Kemistintie 1, 02150 Espoo, Finland; VTT Technical Research Centre of Finland Ltd, Tietotie 2, 02150 Espoo, Finland
| | - A Paananen
- VTT Technical Research Centre of Finland Ltd, Tietotie 2, 02150 Espoo, Finland
| | - G R Szilvay
- VTT Technical Research Centre of Finland Ltd, Tietotie 2, 02150 Espoo, Finland
| | - M B Linder
- Department of Bioproducts and Biosystems, Aalto University, Kemistintie 1, 02150 Espoo, Finland.
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8
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Malho JM, Arola S, Laaksonen P, Szilvay GR, Ikkala O, Linder MB. Modular Architecture of Protein Binding Units for Designing Properties of Cellulose Nanomaterials. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201505980] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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9
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Malho JM, Arola S, Laaksonen P, Szilvay GR, Ikkala O, Linder MB. Modular architecture of protein binding units for designing properties of cellulose nanomaterials. Angew Chem Int Ed Engl 2015; 54:12025-8. [PMID: 26305491 PMCID: PMC4600227 DOI: 10.1002/anie.201505980] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2015] [Indexed: 11/12/2022]
Abstract
Molecular biomimetic models suggest that proteins in the soft matrix of nanocomposites have a multimodular architecture. Engineered proteins were used together with nanofibrillated cellulose (NFC) to show how this type of architecture leads to function. The proteins consist of two cellulose-binding modules (CBM) separated by 12-, 24-, or 48-mer linkers. Engineering the linkers has a considerable effects on the interaction between protein and NFC in both wet colloidal state and a dry film. The protein optionally incorporates a multimerizing hydrophobin (HFB) domain connected by another linker. The modular structure explains effects in the hydrated gel state, as well as the deformation of composite materials through stress distribution and crosslinking. Based on this work, strategies can be suggested for tuning the mechanical properties of materials through the coupling of protein modules and their interlinking architectures.
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Affiliation(s)
- Jani-Markus Malho
- VTT Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, 02044 Espoo (Finland)
| | - Suvi Arola
- School of Chemical Technology, Aalto University, P.O. Box 16100, 00076 Aalto (Finland).,VTT Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, 02044 Espoo (Finland)
| | - Päivi Laaksonen
- School of Chemical Technology, Aalto University, P.O. Box 16100, 00076 Aalto (Finland)
| | - Géza R Szilvay
- VTT Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, 02044 Espoo (Finland)
| | - Olli Ikkala
- School of Science, Aalto University, P.O. Box 15100, 00076 Aalto (Finland)
| | - Markus B Linder
- School of Chemical Technology, Aalto University, P.O. Box 16100, 00076 Aalto (Finland).
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10
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Yotprayoonsakl P, Szilvay GR, Laaksonen P, Linder MB, Ahlskog M. The Effect of Hydrophobin Protein on Conductive Properties of Carbon Nanotube Field-Effect Transistors: First Study on Sensing Mechanism. J Nanosci Nanotechnol 2015; 15:2079-2087. [PMID: 26413623 DOI: 10.1166/jnn.2015.10337] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Hydrophobin is a surface active protein having both hydrophobic and hydrophilic functional domains which has previously been used for functionalization and solubilization of graphene and carbon nanotubes. In this work, field-effect transistors based on single nanotubes have been employed for electronic detection of hydrophobin protein in phosphate buffer solution. Individual nanotubes, single- and multiwalled, are characterized by atomic force microscopy after being immersed in protein solution, showing a relatively dense coverage with hydrophobin. We have studied aspects such as nanotube length (0.3-1.2 µm) and the hysteresis effect in the gate voltage dependent conduction. When measured in ambient condition after the exposure to hydrophobin, the resistance increase has a strong dependence on the nanotube length, which we ascribe to mobility degradation and localization effects. The change could be exceptionally large when measured in-situ in solution and at suitable gate voltage conditions, which is shown to relate to the different mechanism behind the hysteresis effect.
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11
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Gabryelczyk B, Szilvay GR, Singh VK, Mikkilä J, Kostiainen MA, Koskinen J, Linder MB. Engineering of the function of diamond-like carbon binding peptides through structural design. Biomacromolecules 2015; 16:476-82. [PMID: 25522202 DOI: 10.1021/bm501522j] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The use of phage display to select material-specific peptides provides a general route towards modification and functionalization of surfaces and interfaces. However, a rational structural engineering of the peptides for optimal affinity is typically not feasible because of insufficient structure-function understanding. Here, we investigate the influence of multivalency of diamond-like carbon (DLC) binding peptides on binding characteristics. We show that facile linking of peptides together using different lengths of spacers and multivalency leads to a tuning of affinity and kinetics. Notably, increased length of spacers in divalent systems led to significantly increased affinities. Making multimers influenced also kinetic aspects of surface competition. Additionally, the multivalent peptides were applied as surface functionalization components for a colloidal form of DLC. The work suggests the use of a set of linking systems to screen parameters for functional optimization of selected material-specific peptides.
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Affiliation(s)
- Bartosz Gabryelczyk
- Department of Biotechnology and Chemical Technology, Aalto University , P.O. Box 16100, 00076 Aalto, Finland
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12
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Abstract
The molecular structural basis for the function of specific peptides that bind to diamond-like carbon (DLC) surfaces was investigated. For this, a competition assay that provided a robust way of comparing relative affinities of peptide variants was set up. Point mutations of specific residues resulted in significant effects, but it was shown that the chemical composition of the peptide was not sufficient to explain peptide affinity. More significantly, rearrangements in the sequence indicated that the binding is a complex recognition event that is dependent on the overall structure of the peptide. The work demonstrates the unique properties of peptides for creating functionality at interfaces via noncovalent binding for potential applications in, for example, nanomaterials, biomedical materials, and sensors.
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Affiliation(s)
- Bartosz Gabryelczyk
- VTT Technical Research Centre of Finland , P.O. Box 1000, 02044 VTT, Finland
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13
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Malho JM, Heinonen H, Kontro I, Mushi NE, Serimaa R, Hentze HP, Linder MB, Szilvay GR. Formation of ceramophilic chitin and biohybrid materials enabled by a genetically engineered bifunctional protein. Chem Commun (Camb) 2014; 50:7348-51. [DOI: 10.1039/c4cc02170c] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An engineered bifunctional protein from an oyster shell protein and a chitin-binding domain enables the formation of mineralized biohybrid materials.
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Affiliation(s)
| | | | - Inkeri Kontro
- University of Helsinki
- Department of Physics
- , Finland
| | - Ngesa E. Mushi
- Royal Institute of Technology
- Fibre and Polymer Technology
- SE-100 44 Stockholm, Sweden
| | - Ritva Serimaa
- University of Helsinki
- Department of Physics
- , Finland
| | | | - Markus B. Linder
- VTT Technical Research Centre of Finland
- , Finland
- Aalto University
- Department of Biotechnology and Chemical Technology
- 00076 Aalto, Finland
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14
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Grunér MS, Szilvay GR, Berglin M, Lienemann M, Laaksonen P, Linder MB. Self-assembly of class II hydrophobins on polar surfaces. Langmuir 2012; 28:4293-4300. [PMID: 22315927 DOI: 10.1021/la300501u] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Hydrophobins are structural proteins produced by filamentous fungi that are amphiphilic and function through self-assembling into structures such as membranes. They have diverse roles in the growth and development of fungi, for example in adhesion to substrates, for reducing surface tension to allow aerial growth, in forming protective coatings on spores and other structures. Hydrophobin membranes at the air-water interface and on hydrophobic solids are well studied, but understanding how hydrophobins can bind to a polar surface to make it more hydrophobic has remained unresolved. Here we have studied different class II hydrophobins for their ability to bind to polar surfaces that were immersed in buffer solution. We show here that the binding under some conditions results in a significant increase of water contact angle (WCA) on some surfaces. The highest contact angles were obtained on cationic surfaces where the hydrophobin HFBI has an average WCA of 62.6° at pH 9.0, HFBII an average of 69.0° at pH 8.0, and HFBIII had an average WCA of 61.9° at pH 8.0. The binding of the hydrophobins to the positively charged surface was shown to depend on both pH and ionic strength. The results are significant for understanding the mechanism for formation of structures such as the surface of mycelia or fungal spore coatings as well as for possible technical applications.
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Affiliation(s)
- Mathias S Grunér
- VTT Technical Research Centre of Finland, Biotechnology, Espoo, Finland
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15
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Glykys DJ, Szilvay GR, Tortosa P, Suárez Diez M, Jaramillo A, Banta S. Pushing the limits of automatic computational protein design: design, expression, and characterization of a large synthetic protein based on a fungal laccase scaffold. Syst Synth Biol 2011; 5:45-58. [PMID: 22654993 DOI: 10.1007/s11693-011-9080-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2010] [Revised: 11/12/2010] [Accepted: 02/19/2011] [Indexed: 01/29/2023]
Abstract
UNLABELLED The de novo engineering of new proteins will allow the design of complex systems in synthetic biology. But the design of large proteins is very challenging due to the large combinatorial sequence space to be explored and the lack of a suitable selection system to guide the evolution and optimization. One way to approach this challenge is to use computational design methods based on the current crystallographic data and on molecular mechanics. We have used a laccase protein fold as a scaffold to design a new protein sequence that would adopt a 3D conformation in solution similar to a wild-type protein, the Trametes versicolor (TvL) fungal laccase. Laccases are multi-copper oxidases that find utility in a variety of industrial applications. The laccases with highest activity and redox potential are generally secreted fungal glycoproteins. Prokaryotic laccases have been identified with some desirable features, but they often exhibit low redox potentials. The designed sequence (DLac) shares a 50% sequence identity to the original TvL protein. The new DLac gene was overexpressed in E. coli and the majority of the protein was found in inclusion bodies. Both soluble protein and refolded insoluble protein were purified, and their identity was verified by mass spectrometry. Neither protein exhibited the characteristic T1 copper absorbance, neither bound copper by atomic absorption, and neither was active using a variety of laccase substrates over a range of pH values. Circular dichroism spectroscopy studies suggest that the DLac protein adopts a molten globule structure that is similar to the denatured and refolded native fungal TvL protein, which is significantly different from the natively secreted fungal protein. Taken together, these results indicate that the computationally designed DLac expressed in E. coli is unable to utilize the same folding pathway that is used in the expression of the parent TvL protein or the prokaryotic laccases. This sequence can be used going forward to help elucidate the sequence requirements needed for prokaryotic multi-copper oxidase expression. ELECTRONIC SUPPLEMENTARY MATERIAL The online version of this article (doi:10.1007/s11693-011-9080-9) contains supplementary material, which is available to authorized users.
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Szilvay GR, Brocato S, Ivnitski D, Li C, Iglesia PDL, Lau C, Chi E, Werner-Washburne M, Banta S, Atanassov P. Engineering of a redox protein for DNA-directed assembly. Chem Commun (Camb) 2011; 47:7464-6. [DOI: 10.1039/c1cc11951f] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Blenner MA, Shur O, Szilvay GR, Cropek DM, Banta S. Calcium-induced folding of a beta roll motif requires C-terminal entropic stabilization. J Mol Biol 2010; 400:244-56. [PMID: 20438736 DOI: 10.1016/j.jmb.2010.04.056] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2009] [Revised: 04/22/2010] [Accepted: 04/27/2010] [Indexed: 11/30/2022]
Abstract
Beta roll motifs are associated with several proteins secreted by the type 1 secretion system (T1SS). Located just upstream of the C-terminal T1SS secretion signal, they are believed to act as calcium-induced switches that prevent folding before secretion. Bordetella pertussis adenylate cyclase (CyaA) toxin has five blocks of beta roll motifs (or repeats-in-toxin motifs) separated by linkers. The block V motif on its own has been reported to be non-responsive to calcium. Only when the N- and C-terminal linkers, or flanking groups, were fused did the motif bind calcium and fold. In an effort to understand the requirements for beta roll folding, we have truncated the N- and C-terminal flanks at several locations to determine the minimal essential sequences. Calcium-responsive beta roll folding occurred even in the absence of the natural N-terminal flank. The natural C-terminal flank could not be truncated without decreased calcium affinity and only partially truncated before losing calcium-responsiveness. Globular protein fusion at the C-terminus likewise enabled calcium-induced folding but fusions solely at the N-terminus failed. This demonstrates that calcium-induced folding is an inherent property of the beta roll motif rather than the flanking groups. Given the disparate nature of the observed functional flanking groups, C-terminal fusions appear to confer calcium-responsiveness to the beta roll motif via a non-specific mechanism, suggesting that entropic stabilization of the unstructured C-terminus can enable beta roll folding. Increased calcium affinity was observed when the natural C-terminal flank was used to enable calcium-induced folding, pointing to its cooperative participation in beta roll formation. This work indicates that a general principle of C-terminal entropic stabilization can enable stimulus-responsive repeat protein folding, while the C-terminal flank has a specific role in tuning calcium-responsive beta roll formation. These observations are in stark contrast to what has been reported for other repeat proteins.
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Affiliation(s)
- Mark A Blenner
- Department of Chemical Engineering, Columbia University, 500 W 120th Street, New York, NY 10027, USA
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Szilvay GR, Blenner MA, Shur O, Cropek DM, Banta S. A FRET-based method for probing the conformational behavior of an intrinsically disordered repeat domain from Bordetella pertussis adenylate cyclase. Biochemistry 2009; 48:11273-82. [PMID: 19860484 DOI: 10.1021/bi901447j] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A better understanding of the conformational changes exhibited by intrinsically disordered proteins is necessary as we continue to unravel their myriad biological functions. In repeats in toxin (RTX) domains, calcium binding triggers the natively unstructured domain to adopt a beta roll structure. Here we present an in vitro Forster resonance energy transfer (FRET)-based method for the investigation of the conformational behavior of an RTX domain from the Bordetella pertussis adenylate cyclase consisting of nine repeat units. Equilibrium and stopped-flow FRET between fluorescent proteins, attached to the termini of the domain, were measured in an analysis of the end-to-end distance changes in the RTX domain. The method was complemented with circular dichroism spectroscopy, tryptophan fluorescence, and bis-ANS dye binding. High ionic strength was observed to decrease the calcium affinity of the RTX domain. A truncation and single amino acid mutations yielded insights into the structural determinants of beta roll formation. Mutating the conserved Asp residue in one of the nine repeats significantly reduced the affinity of the domains for calcium ions. Removal of the sequences flanking the repeat domain prevented folding, but replacing them with fluorescent proteins restored the conformational behavior, suggesting an entropic stabilization. The FRET-based method is a useful technique that complements other low-resolution techniques for investigating the dynamic conformational behavior of the RTX domain and other intrinsically disordered protein domains.
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Affiliation(s)
- Géza R Szilvay
- Department of Chemical Engineering, Columbia University, 500 West 120th Street, New York, New York 10027, USA
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Kisko K, Szilvay GR, Vuorimaa E, Lemmetyinen H, Linder MB, Torkkeli M, Serimaa R. Self-assembled films of hydrophobin proteins HFBI and HFBII studied in situ at the air/water interface. Langmuir 2009; 25:1612-1619. [PMID: 19093751 DOI: 10.1021/la803252g] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Hydrophobins are a group of surface-active fungal proteins known to adsorb to the air/water interface and self-assemble into highly crystalline films. We characterized the self-assembled protein films of two hydrophobins, HFBI and HFBII from Trichoderma reesei, directly at the air/water interface using Brewster angle microscopy, grazing-incidence X-ray diffraction, and reflectivity. Already in zero surface pressure, HFBI and HFBII self-assembled into micrometer-sized rafts containing hexagonally ordered two-dimensional crystallites with lattice constants of 55 A and 56 A, respectively. Increasing the pressure did not change the ordering of the proteins in the crystallites. According to the reflectivity measurements, the thicknesses of the hydrophobin films were 28 A (HFBI) and 24 A (HFBII) at 20 mN/m. The stable films could also be transferred to a silicon substrate. Modeling of the diffraction data indicated that both hydrophobin films contained six molecules in the unit cell, but the ordering of the molecules was somewhat different for HFBI and HFBII, suggesting specific protein-protein interactions.
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Affiliation(s)
- Kaisa Kisko
- Division of Materials Physics, Department of Physics, University of Helsinki, POB 64, FI-00014, Finland.
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Yu L, Zhang B, Szilvay GR, Sun R, Jänis J, Wang Z, Feng S, Xu H, Linder MB, Qiao M. Protein HGFI from the edible mushroom Grifola frondosa is a novel 8 kDa class I hydrophobin that forms rodlets in compressed monolayers. Microbiology (Reading) 2008; 154:1677-1685. [PMID: 18524922 DOI: 10.1099/mic.0.2007/015263-0] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Hydrophobins are a group of low-molecular-mass, cysteine-rich proteins that have unusual biophysical properties. They are highly surface-active and can self-assemble at hydrophobic-hydrophilic interfaces, forming surface layers that are able to reverse the hydropathy of surfaces. Here we describe a novel hydrophobin from the edible mushroom Grifola frondosa, which was named HGFI and belongs to class I. The hydrophobin gene was identified during sequencing of random clones from a cDNA library, and the corresponding protein was isolated as a hot SDS-insoluble aggregate from the cell wall. The purified HGFI was found to have 83 amino acids. The protein sequence deduced from the cDNA sequence had 107 amino acids, from which a 24 aa signal sequence had been cleaved off in the mature protein. This signal sequence was 5 aa longer than had been predicted on the basis of signal peptide analysis of the cDNA. Rodlet mosaic structures were imaged using atomic force microscopy (AFM) on mica surfaces after drying-down HGFI solutions. Using Langmuir films we were also able to take images of both the hydrophobic and hydrophilic sides of films formed at the air-water interface. No distinct structure was observed in films compressed once, but in films compressed several times rodlet structures could be seen. Most rodlets were aligned in the same direction, indicating that formation of rodlets may be promoted during compression of the monolayer.
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Affiliation(s)
- Lei Yu
- VTT Biotechnology, Technical Research Centre of Finland, PO Box 1000, FI-02044 VTT, Finland.,College of Life Sciences, Nankai University, No. 94 Weijin Road, Tianjin 300071, PR China
| | - Baohua Zhang
- College of Life Sciences, Nankai University, No. 94 Weijin Road, Tianjin 300071, PR China
| | - Géza R Szilvay
- VTT Biotechnology, Technical Research Centre of Finland, PO Box 1000, FI-02044 VTT, Finland
| | - Ren Sun
- College of Life Sciences, Nankai University, No. 94 Weijin Road, Tianjin 300071, PR China
| | - Janne Jänis
- University of Joensuu, Department of Chemistry, PO Box 111, FI-80101 Joensuu, Finland
| | - Zefang Wang
- College of Life Sciences, Nankai University, No. 94 Weijin Road, Tianjin 300071, PR China
| | - Shuren Feng
- College of Life Sciences, Nankai University, No. 94 Weijin Road, Tianjin 300071, PR China
| | - Haijin Xu
- College of Life Sciences, Nankai University, No. 94 Weijin Road, Tianjin 300071, PR China
| | - Markus B Linder
- VTT Biotechnology, Technical Research Centre of Finland, PO Box 1000, FI-02044 VTT, Finland
| | - Mingqiang Qiao
- College of Life Sciences, Nankai University, No. 94 Weijin Road, Tianjin 300071, PR China
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Kisko K, Szilvay GR, Vainio U, Linder MB, Serimaa R. Interactions of hydrophobin proteins in solution studied by small-angle X-ray scattering. Biophys J 2008; 94:198-206. [PMID: 17827247 PMCID: PMC2134873 DOI: 10.1529/biophysj.107.112359] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2007] [Accepted: 08/15/2007] [Indexed: 11/18/2022] Open
Abstract
Hydrophobins are a group of very surface-active, fungal proteins known to self-assemble on various hydrophobic/hydrophilic interfaces. The self-assembled films coat fungal structures and mediate their attachment to surfaces. Hydrophobins are also soluble in water. Here, the association of hydrophobins HFBI and HFBII from Trichoderma reesei in aqueous solution was studied using small-angle x-ray scattering. Both HFBI and HFBII exist mainly as tetramers in solution in the concentration range 0.5-10 mg/ml. The assemblies of HFBII dissociate more easily than those of HFBI, which can tolerate changes of pH from 3 to 9 and temperatures in the range 5 degrees C-60 degrees C. The self-association of HFBI and HFBII is mainly driven by the hydrophobic effect, and addition of salts along the Hofmeister series promotes the formation of larger assemblies, whereas ethanol breaks the tetramers into monomers. The possibility that the oligomers in solution form the building blocks of the self-assembled film at the air/water interface is discussed.
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Affiliation(s)
- Kaisa Kisko
- Department of Physical Sciences, University of Helsinki, FI-00014 HU, Finland.
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Kostiainen MA, Szilvay GR, Lehtinen J, Smith DK, Linder MB, Urtti A, Ikkala O. Precisely defined protein-polymer conjugates: construction of synthetic DNA binding domains on proteins by using multivalent dendrons. ACS Nano 2007; 1:103-113. [PMID: 19206526 DOI: 10.1021/nn700053y] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Nature has evolved proteins and enzymes to carry out a wide range of sophisticated tasks. Proteins modified with functional polymers possess many desirable physical and chemical properties and have applications in nanobiotechnology. Here we describe multivalent Newkome-type polyamine dendrons that function as synthetic DNA binding domains, which can be conjugated with proteins. These polyamine dendrons employ naturally occurring spermine surface groups to bind DNA with high affinity and are attached onto protein surfaces in a site-specific manner to yield well-defined one-to-one protein-polymer conjugates, where the number of dendrons and their attachment site on the protein surface are precisely known. This precise structure is achieved by using N-maleimido-core dendrons that selectively react via 1,4-conjugate addition with a single free thiol group on the protein surface--either Cys-34 of bovine serum albumin (BSA) or a genetically engineered cysteine mutant of Class II hydrophobin (HFBI). This reaction can be conducted in mild aqueous solutions (pH 7.2-7.4) and at ambient temperature, resulting in BSA- and HFBI-dendron conjugates. The protein-dendron conjugates constitute a specific biosynthetic diblock copolymer and bind DNA with high affinity, as shown by ethidium bromide displacement assay. Importantly, even the low-molecular-weight first-generation polyamine dendron (1 kDa) can bind a large BSA protein (66.4 kDa) to DNA with relatively good affinity. Preliminary gene transfection, cytotoxicity, and self-assembly studies establish the relevance of this methodology for in vitro applications, such as gene therapy and surface patterning. These results encourage further developments in protein-dendron block copolymer-like conjugates and will allow the advance of functional biomimetic nanoscale materials.
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Affiliation(s)
- Mauri A Kostiainen
- Department of Engineering, Physics, and Mathematics and Center for New Materials, Helsinki University of Technology, P.O. Box 2200, 02015 HUT, Espoo, Finland.
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Kurppa K, Jiang H, Szilvay GR, Nasibulin AG, Kauppinen EI, Linder MB. Controlled Hybrid Nanostructures through Protein-Mediated Noncovalent Functionalization of Carbon Nanotubes. Angew Chem Int Ed Engl 2007; 46:6446-9. [PMID: 17654645 DOI: 10.1002/anie.200702298] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Katri Kurppa
- VTT Biotechnology, VTT Technical Research Centre of Finland, Tietotie 2, P.O. Box 1000, 02044 Espoo, Finland.
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Szilvay GR, Kisko K, Serimaa R, Linder MB. The relation between solution association and surface activity of the hydrophobin HFBI fromTrichoderma reesei. FEBS Lett 2007; 581:2721-6. [PMID: 17531982 DOI: 10.1016/j.febslet.2007.05.024] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2007] [Revised: 04/27/2007] [Accepted: 05/07/2007] [Indexed: 11/19/2022]
Abstract
Hydrophobins are small fungal surface active proteins that self-assemble at interfaces into films with nanoscale structures. The hydrophobin HFBI from Trichoderma reesei has been shown to associate in solution into tetramers but the role of this association on the function of HFBI has remained unclear. We produced two HFBI variants that showed a significant shift in solution association equilibrium towards the tetramer state. However, this enhanced solution association did not alter the surface properties of the variant HFBIs. The results show that there is not a strong relationship between HFBI solution association state and surface properties such as surface activity.
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Szilvay GR, Paananen A, Laurikainen K, Vuorimaa E, Lemmetyinen H, Peltonen J, Linder MB. Self-assembled hydrophobin protein films at the air-water interface: structural analysis and molecular engineering. Biochemistry 2007; 46:2345-54. [PMID: 17297923 DOI: 10.1021/bi602358h] [Citation(s) in RCA: 143] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hydrophobins are amphiphilic proteins produced by filamentous fungi. They function in a variety of roles that involve interfacial interactions, as in growth through the air-water interface, adhesion to surfaces, and formation of coatings on various fungal structures. In this work, we have studied the formation of films of the class II hydrophobin HFBI from Trichoderma reesei at the air-water interface. Analysis of hydrophobin aqueous solution drops showed that a protein film is formed at the air-water interface. This elastic film was clearly visible, and it appeared to cause the drops to take unusual shapes. Because adhesion and formation of coatings are important biological functions for hydrophobins, a closer structural analysis of the film was made. The method involved picking up the surface film onto a solid substrate and imaging the surface by atomic force microscopy. High-resolution images were obtained showing both the hydrophilic and hydrophobic sides of the film at nanometer resolution. It was found that the hydrophobin film had a highly ordered structure. To study the orientation of molecules and to obtain further insight in film formation, we made variants of HFBI that could be site specifically conjugated. We then used the avidin-biotin interaction as a probe. On the basis of this work, we suggest that the unusual interfacial properties of this type of hydrophobins are due to specific molecular interactions which lead to an ordered network of proteins in the surface films that have a thickness of only one molecule. The interactions between the proteins in the network are likely to be responsible for the unusual surface elasticity of the hydrophobin film.
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Affiliation(s)
- Géza R Szilvay
- VTT Technical Research Centre of Finland, P.O. Box 1000, FI-02044 VTT, Espoo, Finland.
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Kisko K, Szilvay GR, Vuorimaa E, Lemmetyinen H, Linder MB, Torkkeli M, Serimaa R. Self-assembled films of hydrophobin protein HFBIII from Trichoderma reesei. J Appl Crystallogr 2007. [DOI: 10.1107/s0021889807001331] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Hakanpää J, Szilvay GR, Kaljunen H, Maksimainen M, Linder M, Rouvinen J. Two crystal structures of Trichoderma reesei hydrophobin HFBI--the structure of a protein amphiphile with and without detergent interaction. Protein Sci 2006; 15:2129-40. [PMID: 16882996 PMCID: PMC2242604 DOI: 10.1110/ps.062326706] [Citation(s) in RCA: 131] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2006] [Revised: 06/05/2006] [Accepted: 06/08/2006] [Indexed: 10/24/2022]
Abstract
Hydrophobins are small fungal proteins that are highly surface active and possess a unique ability to form amphiphilic membranes through spontaneous self-assembly. The first crystal structure of a hydrophobin, Trichoderma reesei HFBII, revealed the structural basis for the function of this amphiphilic protein--a patch consisting of hydrophobic side chains on the protein surface. Here, the crystal structures of a native and a variant T. reesei hydrophobin HFBI are presented, revealing the same overall structure and functional hydrophobic patch as in the HFBII structure. However, some structural flexibility was found in the native HFBI structure: The asymmetric unit contained four molecules, and, in two of these, an area of seven residues was displaced as compared to the two other HFBI molecules and the previously determined HFBII structure. This structural change is most probably induced by multimer formation. Both the native and the N-Cys-variant of HFBI were crystallized in the presence of detergents, but an association between the protein and a detergent was only detected in the variant structure. There, the molecules were arranged into an extraordinary detergent-associated octamer and the solvent content of the crystals was 75%. This study highlights the conservation of the fold of class II hydrophobins in spite of the low sequence identity and supports our previous suggestion that concealment of the hydrophobic surface areas of the protein is the driving force in the formation of multimers and monolayers in the self-assembly process.
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Szilvay GR, Nakari-Setälä T, Linder MB. Behavior of Trichoderma reesei Hydrophobins in Solution: Interactions, Dynamics, and Multimer Formation. Biochemistry 2006; 45:8590-8. [PMID: 16834333 DOI: 10.1021/bi060620y] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Filamentous fungi utilize small amphiphilic proteins called hydrophobins in their adaptation to the environment. The hydrophobins are used to form coatings on various fungal structures, lower the surface tension of water, and to mediate surface attachment. Hydrophobins function through self-assembly at interfaces, for example, at the air-water interface, and at fungal cellular structures. Despite their high tendency to self assemble at interfaces, hydrophobins can be very soluble in water. To understand the mechanism of hydrophobin self-assembly, in this work, we have studied the behavior of two Trichoderma reesei hydrophobins, HFBI and HFBII in aqueous solution. The main methods used were Förster resonance energy transfer (FRET) and size exclusion chromatography. A genetically engineered HFBI variant, NCys-HFBI, was utilized for the site-specific labeling of dyes for the FRET experiments. We observed the multimerization of HFBI in a concentration-dependent manner. A change from monomers to tetramers was seen when the hydrophobin concentration was increased. Interaction studies between HFBI and HFBII suggested that at low concentrations homodimers are preferred, and at higher concentrations, the heterotetramers of HFBI and HFBII are formed. In conclusion, the results support the model where hydrophobins in aqueous solutions form multimers by hydrophobic interactions. In contrast to micelles formed by detergents, the hydrophobin multimers are defined in size and involve specific protein-protein interactions.
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Affiliation(s)
- Géza R Szilvay
- VTT Biotechnology, Tietotie 2, P.O. Box 1000, FIN-02044 VTT, Finland.
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Kostiainen MA, Szilvay GR, Smith DK, Linder MB, Ikkala O. Multivalent Dendrons for High-Affinity Adhesion of Proteins to DNA. Angew Chem Int Ed Engl 2006. [DOI: 10.1002/ange.200504540] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Affiliation(s)
- Mauri A Kostiainen
- Department of Engineering Physics and Mathematics and Center for New Materials, Helsinki University of Technology, P.O. BOX 2200, 02015 HUT, Espoo, Finland.
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Linder MB, Szilvay GR, Nakari-Setälä T, Penttilä ME. Hydrophobins: the protein-amphiphiles of filamentous fungi. FEMS Microbiol Rev 2005; 29:877-96. [PMID: 16219510 DOI: 10.1016/j.femsre.2005.01.004] [Citation(s) in RCA: 410] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2004] [Revised: 12/20/2004] [Accepted: 01/21/2005] [Indexed: 11/22/2022] Open
Abstract
Hydrophobins are surface active proteins produced by filamentous fungi. They have a role in fungal growth as structural components and in the interaction of fungi with their environment. They have, for example, been found to be important for aerial growth, and for the attachment of fungi to solid supports. Hydrophobins also render fungal structures, such as spores, hydrophobic. The biophysical properties of the isolated proteins are remarkable, such as strong adhesion, high surface activity and the formation of various self-assembled structures. The first high resolution three dimensional structure of a hydrophobin, HFBII from Trichoderma reesei, was recently solved. In this review, the properties of hydrophobins are analyzed in light of these new data. Various application possibilities are also discussed.
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Affiliation(s)
- Markus B Linder
- VTT Biotechnology, Tietotie 2, P.O.Box 1500, FIN-02044 VTT, Finland.
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