1
|
Cribb JA, Osborne LD, Beicker K, Psioda M, Chen J, O'Brien ET, Taylor Ii RM, Vicci L, Hsiao JPL, Shao C, Falvo M, Ibrahim JG, Wood KC, Blobe GC, Superfine R. An Automated High-throughput Array Microscope for Cancer Cell Mechanics. Sci Rep 2016; 6:27371. [PMID: 27265611 PMCID: PMC4893602 DOI: 10.1038/srep27371] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2016] [Accepted: 05/18/2016] [Indexed: 12/14/2022] Open
Abstract
Changes in cellular mechanical properties correlate with the progression of metastatic cancer along the epithelial-to-mesenchymal transition (EMT). Few high-throughput methodologies exist that measure cell compliance, which can be used to understand the impact of genetic alterations or to screen the efficacy of chemotherapeutic agents. We have developed a novel array high-throughput microscope (AHTM) system that combines the convenience of the standard 96-well plate with the ability to image cultured cells and membrane-bound microbeads in twelve independently-focusing channels simultaneously, visiting all wells in eight steps. We use the AHTM and passive bead rheology techniques to determine the relative compliance of human pancreatic ductal epithelial (HPDE) cells, h-TERT transformed HPDE cells (HPNE), and four gain-of-function constructs related to EMT. The AHTM found HPNE, H-ras, Myr-AKT, and Bcl2 transfected cells more compliant relative to controls, consistent with parallel tests using atomic force microscopy and invasion assays, proving the AHTM capable of screening for changes in mechanical phenotype.
Collapse
Affiliation(s)
- Jeremy A Cribb
- Department of Physics and Astronomy, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Lukas D Osborne
- Department of Physics and Astronomy, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Kellie Beicker
- Department of Physics and Astronomy, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Matthew Psioda
- Department of Biostatistics, UNC-Chapel Hill, Chapel Hill, NC United States of America
| | - Jian Chen
- Department of Medicine and Pharmacology and Cancer Biology, Duke University Medical Center, Durham, North Carolina, United States of America
| | - E Timothy O'Brien
- Department of Physics and Astronomy, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Russell M Taylor Ii
- Department of Physics and Astronomy, UNC-Chapel Hill, Chapel Hill, NC, United States of America.,Department of Computer Science, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Leandra Vicci
- Department of Computer Science, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Joe Ping-Lin Hsiao
- Department of Computer Science, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Chong Shao
- Department of Computer Science, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Michael Falvo
- Department of Physics and Astronomy, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| | - Joseph G Ibrahim
- Department of Biostatistics, The Lineberger Comprehensive Cancer Center, The University of North Carolina School of Medicine, Chapel Hill, North Carolina, United States of America
| | - Kris C Wood
- Department of Pharmacology and Cancer Biology, Duke University, 450 Research Drive, Durham, NC 27710, United States of America
| | - Gerard C Blobe
- Department of Medicine and Pharmacology and Cancer Biology, Duke University Medical Center, Durham, North Carolina, United States of America
| | - Richard Superfine
- Department of Physics and Astronomy, UNC-Chapel Hill, Chapel Hill, NC, United States of America
| |
Collapse
|
2
|
Lawrimore J, Aicher JK, Hahn P, Fulp A, Kompa B, Vicci L, Falvo M, Taylor RM, Bloom K. ChromoShake: a chromosome dynamics simulator reveals that chromatin loops stiffen centromeric chromatin. Mol Biol Cell 2016; 27:153-66. [PMID: 26538024 PMCID: PMC4694754 DOI: 10.1091/mbc.e15-08-0575] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2015] [Revised: 10/27/2015] [Accepted: 10/27/2015] [Indexed: 12/12/2022] Open
Abstract
ChromoShake is a three-dimensional simulator designed to find the thermodynamically favored states for given chromosome geometries. The simulator has been applied to a geometric model based on experimentally determined positions and fluctuations of DNA and the distribution of cohesin and condensin in the budding yeast centromere. Simulations of chromatin in differing initial configurations reveal novel principles for understanding the structure and function of a eukaryotic centromere. The entropic position of DNA loops mirrors their experimental position, consistent with their radial displacement from the spindle axis. The barrel-like distribution of cohesin complexes surrounding the central spindle in metaphase is a consequence of the size of the DNA loops within the pericentromere to which cohesin is bound. Linkage between DNA loops of different centromeres is requisite to recapitulate experimentally determined correlations in DNA motion. The consequences of radial loops and cohesin and condensin binding are to stiffen the DNA along the spindle axis, imparting an active function to the centromere in mitosis.
Collapse
Affiliation(s)
- Josh Lawrimore
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Joseph K Aicher
- Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Patrick Hahn
- Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Alyona Fulp
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Ben Kompa
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Leandra Vicci
- Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Michael Falvo
- Department of Physics and Astronomy, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Russell M Taylor
- Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| | - Kerry Bloom
- Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-3280
| |
Collapse
|
3
|
Abstract
The geometry and arrangement of DNA loops in the pericentric region of the budding yeast centromere create a DNA-based molecular shock absorber that serves as the basis for how tension is generated between sister centromeres in mitosis. The centromere is the DNA locus that dictates kinetochore formation and is visibly apparent as heterochromatin that bridges sister kinetochores in metaphase. Sister centromeres are compacted and held together by cohesin, condensin, and topoisomerase-mediated entanglements until all sister chromosomes bi-orient along the spindle apparatus. The establishment of tension between sister chromatids is essential for quenching a checkpoint kinase signal generated from kinetochores lacking microtubule attachment or tension. How the centromere chromatin spring is organized and functions as a tensiometer is largely unexplored. We have discovered that centromere chromatin loops generate an extensional/poleward force sufficient to release nucleosomes proximal to the spindle axis. This study describes how the physical consequences of DNA looping directly underlie the biological mechanism for sister centromere separation and the spring-like properties of the centromere in mitosis.
Collapse
Affiliation(s)
- Josh Lawrimore
- Department of Biology, University of North Carolina, Chapel Hill, NC 27599
| | - Paula A Vasquez
- Department of Mathematics, University of South Carolina, Columbia, SC 29208
| | - Michael R Falvo
- Department of Physics and Astronomy, University of North Carolina, Chapel Hill, NC 27599
| | - Russell M Taylor
- Department of Computer Science, University of North Carolina, Chapel Hill, NC 27599
| | - Leandra Vicci
- Department of Computer Science, University of North Carolina, Chapel Hill, NC 27599
| | - Elaine Yeh
- Department of Biology, University of North Carolina, Chapel Hill, NC 27599
| | - M Gregory Forest
- Department of Mathematics and Biomedical Engineering, University of North Carolina, Chapel Hill, NC 27599
| | - Kerry Bloom
- Department of Biology, University of North Carolina, Chapel Hill, NC 27599
| |
Collapse
|
4
|
Cribb J, Osborne LD, Hsiao JPL, Vicci L, Meshram A, O'Brien ET, Spero RC, Taylor R, Superfine R. A high throughput array microscope for the mechanical characterization of biomaterials. Rev Sci Instrum 2015; 86:023711. [PMID: 25725856 PMCID: PMC4344474 DOI: 10.1063/1.4907705] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2014] [Accepted: 01/26/2015] [Indexed: 05/24/2023]
Abstract
In the last decade, the emergence of high throughput screening has enabled the development of novel drug therapies and elucidated many complex cellular processes. Concurrently, the mechanobiology community has developed tools and methods to show that the dysregulation of biophysical properties and the biochemical mechanisms controlling those properties contribute significantly to many human diseases. Despite these advances, a complete understanding of the connection between biomechanics and disease will require advances in instrumentation that enable parallelized, high throughput assays capable of probing complex signaling pathways, studying biology in physiologically relevant conditions, and capturing specimen and mechanical heterogeneity. Traditional biophysical instruments are unable to meet this need. To address the challenge of large-scale, parallelized biophysical measurements, we have developed an automated array high-throughput microscope system that utilizes passive microbead diffusion to characterize mechanical properties of biomaterials. The instrument is capable of acquiring data on twelve-channels simultaneously, where each channel in the system can independently drive two-channel fluorescence imaging at up to 50 frames per second. We employ this system to measure the concentration-dependent apparent viscosity of hyaluronan, an essential polymer found in connective tissue and whose expression has been implicated in cancer progression.
Collapse
Affiliation(s)
- Jeremy Cribb
- Department of Physics and Astronomy, University of North Carolina at Chapel Hill, 345 Chapman Hall, CB #3255, Chapel Hill, North Carolina 27599, USA
| | - Lukas D Osborne
- Department of Physics and Astronomy, University of North Carolina at Chapel Hill, 345 Chapman Hall, CB #3255, Chapel Hill, North Carolina 27599, USA
| | - Joe Ping-Lin Hsiao
- Department of Computer Science, University of North Carolina at Chapel Hill, Sitterson Hall, CB #3175, Chapel Hill, North Carolina 27599, USA
| | - Leandra Vicci
- Department of Computer Science, University of North Carolina at Chapel Hill, Sitterson Hall, CB #3175, Chapel Hill, North Carolina 27599, USA
| | - Alok Meshram
- Department of Computer Science, University of North Carolina at Chapel Hill, Sitterson Hall, CB #3175, Chapel Hill, North Carolina 27599, USA
| | - E Tim O'Brien
- Department of Physics and Astronomy, University of North Carolina at Chapel Hill, 345 Chapman Hall, CB #3255, Chapel Hill, North Carolina 27599, USA
| | - Richard Chasen Spero
- Rheomics Inc., B40 Chapman Hall CB #3255, Chapel Hill, North Carolina 27599, USA
| | - Russell Taylor
- Department of Computer Science, University of North Carolina at Chapel Hill, Sitterson Hall, CB #3175, Chapel Hill, North Carolina 27599, USA
| | - Richard Superfine
- Department of Physics and Astronomy, University of North Carolina at Chapel Hill, 345 Chapman Hall, CB #3255, Chapel Hill, North Carolina 27599, USA
| |
Collapse
|
5
|
Osborne LD, Cribb J, Vicci L, O'Brien ET, Hsiao J, Taylor R, Superfine R. Array Microscope for High Throughput Stiffness Characterization of Cancer Biology. Biophys J 2014. [DOI: 10.1016/j.bpj.2013.11.3423] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
|
6
|
Stephens AD, Haggerty RA, Vasquez PA, Vicci L, Snider CE, Shi F, Quammen C, Mullins C, Haase J, Taylor RM, Verdaasdonk JS, Falvo MR, Jin Y, Forest MG, Bloom K. Pericentric chromatin loops function as a nonlinear spring in mitotic force balance. ACTA ACUST UNITED AC 2013; 200:757-72. [PMID: 23509068 PMCID: PMC3601350 DOI: 10.1083/jcb.201208163] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
During mitosis, cohesin- and condensin-based pericentric chromatin loops function as a spring network to balance spindle microtubule force. The mechanisms by which sister chromatids maintain biorientation on the metaphase spindle are critical to the fidelity of chromosome segregation. Active force interplay exists between predominantly extensional microtubule-based spindle forces and restoring forces from chromatin. These forces regulate tension at the kinetochore that silences the spindle assembly checkpoint to ensure faithful chromosome segregation. Depletion of pericentric cohesin or condensin has been shown to increase the mean and variance of spindle length, which have been attributed to a softening of the linear chromatin spring. Models of the spindle apparatus with linear chromatin springs that match spindle dynamics fail to predict the behavior of pericentromeric chromatin in wild-type and mutant spindles. We demonstrate that a nonlinear spring with a threshold extension to switch between spring states predicts asymmetric chromatin stretching observed in vivo. The addition of cross-links between adjacent springs recapitulates coordination between pericentromeres of neighboring chromosomes.
Collapse
Affiliation(s)
- Andrew D Stephens
- Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
7
|
Stephens AD, Haase J, Vicci L, Taylor RM, Bloom K. Cohesin, condensin, and the intramolecular centromere loop together generate the mitotic chromatin spring. J Cell Biol 2011; 193:1167-80. [PMID: 21708976 PMCID: PMC3216333 DOI: 10.1083/jcb.201103138] [Citation(s) in RCA: 113] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2011] [Accepted: 05/25/2011] [Indexed: 01/18/2023] Open
Abstract
Sister chromatid cohesion provides the mechanistic basis, together with spindle microtubules, for generating tension between bioriented chromosomes in metaphase. Pericentric chromatin forms an intramolecular loop that protrudes bidirectionally from the sister chromatid axis. The centromere lies on the surface of the chromosome at the apex of each loop. The cohesin and condensin structural maintenance of chromosomes (SMC) protein complexes are concentrated within the pericentric chromatin, but whether they contribute to tension-generating mechanisms is not known. To understand how pericentric chromatin is packaged and resists tension, we map the position of cohesin (SMC3), condensin (SMC4), and pericentric LacO arrays within the spindle. Condensin lies proximal to the spindle axis and is responsible for axial compaction of pericentric chromatin. Cohesin is radially displaced from the spindle axis and confines pericentric chromatin. Pericentric cohesin and condensin contribute to spindle length regulation and dynamics in metaphase. Together with the intramolecular centromere loop, these SMC complexes constitute a molecular spring that balances spindle microtubule force in metaphase.
Collapse
Affiliation(s)
- Andrew D. Stephens
- Department of Biology and Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599
| | - Julian Haase
- Department of Biology and Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599
| | - Leandra Vicci
- Department of Biology and Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599
| | - Russell M. Taylor
- Department of Biology and Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599
| | - Kerry Bloom
- Department of Biology and Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599
| |
Collapse
|
8
|
Spero RC, Vicci L, Cribb J, Bober D, Swaminathan V, O'Brien ET, Rogers SL, Superfine R. High throughput system for magnetic manipulation of cells, polymers, and biomaterials. Rev Sci Instrum 2008; 79:083707. [PMID: 19044357 PMCID: PMC2748383 DOI: 10.1063/1.2976156] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2008] [Accepted: 08/04/2008] [Indexed: 05/22/2023]
Abstract
In the past decade, high throughput screening (HTS) has changed the way biochemical assays are performed, but manipulation and mechanical measurement of micro- and nanoscale systems have not benefited from this trend. Techniques using microbeads (particles approximately 0.1-10 mum) show promise for enabling high throughput mechanical measurements of microscopic systems. We demonstrate instrumentation to magnetically drive microbeads in a biocompatible, multiwell magnetic force system. It is based on commercial HTS standards and is scalable to 96 wells. Cells can be cultured in this magnetic high throughput system (MHTS). The MHTS can apply independently controlled forces to 16 specimen wells. Force calibrations demonstrate forces in excess of 1 nN, predicted force saturation as a function of pole material, and powerlaw dependence of F approximately r(-2.7+/-0.1). We employ this system to measure the stiffness of SR2+ Drosophila cells. MHTS technology is a key step toward a high throughput screening system for micro- and nanoscale biophysical experiments.
Collapse
Affiliation(s)
- Richard Chasen Spero
- Department of Physics and Astronomy, University of North Carolina at Chapel Hill, 141 Phillips Hall, CB #3255, Chapel Hill, North Carolina 27599, USA
| | | | | | | | | | | | | | | |
Collapse
|
9
|
Desai KV, Bishop TG, Vicci L, O'Brien ET, Taylor RM, Superfine R. Agnostic particle tracking for three-dimensional motion of cellular granules and membrane-tethered bead dynamics. Biophys J 2008; 94:2374-84. [PMID: 18055538 PMCID: PMC2257905 DOI: 10.1529/biophysj.107.114140] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2007] [Accepted: 10/05/2007] [Indexed: 11/18/2022] Open
Abstract
The ability to detect biological events at the single-molecule level provides unique biophysical insights. Back-focal-plane laser interferometry is a promising technique for nanoscale three-dimensional position measurements at rates far beyond the capability of standard video. We report an in situ calibration technique for back-focal-plane, low-power (nontrapping) laser interferometry. The technique does not rely on any a priori model or calibration knowledge, hence the name "agnostic". We apply the technique to track long-range (up to 100 microm) motion of a variety of particles, including magnetic beads, in three-dimensions with high spatiotemporal resolution ( approximately 2 nm, 100 micros). Our tracking of individual unlabeled vesicles revealed a previously unreported grouping of mean-squared displacement curves at short timescales (<10 ms). Also, tracking functionalized magnetic beads attached to a live cell membrane revealed an anchorage-dependent nonlinear response of the membrane. The software-based technique involves injecting small perturbations into the probe position by driving a precalibrated specimen-mounting stage while recording the quadrant photodetector signals. The perturbations and corresponding quadrant photodetector signals are analyzed to extract the calibration parameters. The technique is sufficiently fast and noninvasive that the calibration can be performed on-the-fly without interrupting or compromising high-bandwidth, long-range tracking of a particle.
Collapse
Affiliation(s)
- Kalpit V Desai
- Department of Biomedical Engineering, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
| | | | | | | | | | | |
Collapse
|
10
|
Bouzarth EL, Brooks A, Camassa R, Jing H, Leiterman TJ, McLaughlin RM, Superfine R, Toledo J, Vicci L. Epicyclic orbits in a viscous fluid about a precessing rod: theory and experiments at the micro- and macro-scales. Phys Rev E Stat Nonlin Soft Matter Phys 2007; 76:016313. [PMID: 17677569 DOI: 10.1103/physreve.76.016313] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2006] [Revised: 12/27/2006] [Indexed: 05/16/2023]
Abstract
We present experimental observations and quantified theoretical predictions of the nanoscale hydrodynamics induced by nanorod precession emulating primary cilia motion in developing embryos. We observe phenomena including micron size particles which exhibit epicyclic orbits with coherent fluctuations distinguishable from comparable amplitude thermal noise. Quantifying the mixing and transport physics of such motions on small scales is critical to understanding fundamental biological processes such as extracellular redistribution of nutrients. We present experiments designed to quantify the trajectories of these particles, which are seen to consist of slow orbits about the rod, with secondary epicycles quasicommensurate with the precession rate. A first-principles theory is developed to predict trajectories in such time-varying flows. The theory is further tested using a dynamically similar macroscale experiment to remove thermal noise effects. The excellent agreement between our theory and experiments confirms that the continuum hypothesis applies all the way to the scales of such submicron biological motions.
Collapse
Affiliation(s)
- Elizabeth L Bouzarth
- Department of Mathematics, University of North Carolina, Chapel Hill, North Carolina 27599-3250, USA
| | | | | | | | | | | | | | | | | |
Collapse
|
11
|
Hall AR, An L, Liu J, Vicci L, Falvo MR, Superfine R, Washburn S. Experimental measurement of single-wall carbon nanotube torsional properties. Phys Rev Lett 2006; 96:256102. [PMID: 16907325 PMCID: PMC3274556 DOI: 10.1103/physrevlett.96.256102] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2006] [Indexed: 05/11/2023]
Abstract
We report on the characterization of nanometer-scale torsional devices based on individual single-walled carbon nanotubes as the spring elements. The axial shear moduli of the nanotubes are obtained through modeling of device reaction to various amounts of applied electrostatic force and are compared to theoretical values.
Collapse
Affiliation(s)
- A R Hall
- Curriculum in Applied and Materials Sciences, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA
| | | | | | | | | | | | | |
Collapse
|
12
|
Fisher JK, Cribb J, Desai KV, Vicci L, Wilde B, Keller K, Taylor RM, Haase J, Bloom K, O'Brien ET, Superfine R. Thin-foil magnetic force system for high-numerical-aperture microscopy. Rev Sci Instrum 2006; 77:nihms8302. [PMID: 16858495 PMCID: PMC1513178 DOI: 10.1063/1.2166509] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Forces play a key role in a wide range of biological phenomena from single-protein conformational dynamics to transcription and cell division, to name a few. The majority of existing microbiological force application methods can be divided into two categories: those that can apply relatively high forces through the use of a physical connection to a probe and those that apply smaller forces with a detached probe. Existing magnetic manipulators utilizing high fields and high field gradients have been able to reduce this gap in maximum applicable force, but the size of such devices has limited their use in applications where high force and high-numerical-aperture (NA) microscopy must be combined. We have developed a magnetic manipulation system that is capable of applying forces in excess of 700 pN on a 1 mum paramagnetic particle and 13 nN on a 4.5 mum paramagnetic particle, forces over the full 4pi sr, and a bandwidth in excess of 3 kHz while remaining compatible with a commercially available high-NA microscope objective. Our system design separates the pole tips from the flux coils so that the magnetic-field geometry at the sample is determined by removable thin-foil pole plates, allowing easy change from experiment to experiment. In addition, we have combined the magnetic manipulator with a feedback-enhanced, high-resolution (2.4 nm), high-bandwidth (10 kHz), long-range (100 mum xyz range) laser tracking system. We demonstrate the usefulness of this system in a study of the role of forces in higher-order chromosome structure and function.
Collapse
Affiliation(s)
- J K Fisher
- Department of Biomedical Engineering, University of North Carolina, Chapel Hill, North Carolina 27599-7575
| | | | | | | | | | | | | | | | | | | | | |
Collapse
|
13
|
Papadakis SJ, Hall AR, Williams PA, Vicci L, Falvo MR, Superfine R, Washburn S. Resonant oscillators with carbon-nanotube torsion springs. Phys Rev Lett 2004; 93:146101. [PMID: 15524813 DOI: 10.1103/physrevlett.93.146101] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2004] [Indexed: 05/24/2023]
Abstract
We report on the characterization of nanometer-scale resonators. Each device incorporates one multiwalled carbon nanotube (MWNT) as a torsional spring. The devices are actuated electrostatically, and their deflections, both low frequency and on resonance, are detected optically. These are some of the smallest electromechanical devices ever created and are a demonstration of practical integrated MWNT-based oscillators. The results also show surprising intershell mechanical coupling behavior in the MWNTs.
Collapse
Affiliation(s)
- S J Papadakis
- Department of Physics and Astronomy, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA
| | | | | | | | | | | | | |
Collapse
|