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Vorimore F, Aaziz R, Al Qaysi L, Wernery U, Borel N, Sachse K, Laroucau K. Detection of a novel genotype of Chlamydia buteonis in falcons from the Emirates. Vet Microbiol 2024; 291:110027. [PMID: 38430716 DOI: 10.1016/j.vetmic.2024.110027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2023] [Revised: 02/07/2024] [Accepted: 02/08/2024] [Indexed: 03/05/2024]
Abstract
Chlamydiaceae are a family of obligate intracellular bacterial pathogens that affect both humans and animals. Recently, a new species named Chlamydia (C.) buteonis was isolated from hawks. In this study, we aimed to investigate the prevalence of Chlamydiaceae in 60 falcons that underwent a routine health check at a specialized clinic in Dubai, United Arab Emirates. Using real-time PCR, we analyzed cloacal and tracheal swabs from these birds and found that 39 of them tested positive for Chlamydiaceae. Subsequent real-time PCR assays specific for C. psittaci, C. abortus, C. avium, and C. gallinacea yielded negative results, while testing positive for C. buteonis. Analysis of ompA and MLST sequences indicated a highly conserved group of strains within this set of samples, but with sequences distinct from the C. buteonis RSHA reference strains and other C. buteonis strains isolated from hawks in the United States. Two strains were further isolated by cell culture and sequenced using whole-genome sequencing, confirming the clustering of these falcon strains within the C. buteonis species, but in a separate clade from the previously identified hawk strains. We also developed a SNP-based PCR-HRM assay to distinguish between these different genotypes. Overall, our findings suggest a high prevalence of C. buteonis in falcons in Dubai and highlight the importance of monitoring this pathogen in birds of prey.
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Affiliation(s)
- F Vorimore
- Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, Maisons-Alfort, France; Anses, Identhypath, Maisons-Alfort, France
| | - R Aaziz
- Anses, Identhypath, Maisons-Alfort, France
| | - L Al Qaysi
- Lehbab Clinic, Dubai, United Arab Emirates
| | | | - N Borel
- Institute of Veterinary Pathology, Vetsuisse Faculty, University of Zurich, Zurich, Switzerland
| | - K Sachse
- RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University, Jena, Germany
| | - K Laroucau
- Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, Maisons-Alfort, France.
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Laroucau K, Ortega N, Vorimore F, Aaziz R, Mitura A, Szymanska-Czerwinska M, Cicerol M, Salinas J, Sachse K, Caro MR. Detection of a novel Chlamydia species in captive spur-thighed tortoises (Testudo graeca) in southeastern Spain and proposal of Candidatus Chlamydia testudinis. Syst Appl Microbiol 2020; 43:126071. [PMID: 32085936 DOI: 10.1016/j.syapm.2020.126071] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 01/30/2020] [Accepted: 02/04/2020] [Indexed: 12/18/2022]
Abstract
The spur-thighed tortoise (Testudo graeca) is an endangered Mediterranean tortoise that lives in North Africa, Southern Europe and Southwest Asia. In the wake of recent legislation making their keeping as domestic animals illegal, many of these animals have been returned to wildlife recovery centers in Spain. In the present study, a population of such tortoises showing signs of ocular disease and nasal discharge was examined for the presence of Chlamydia spp. Cloacal, conjunctival and/or choanal swabs were collected from 58 animals. Using a real-time PCR specific for the family Chlamydiaceae, 57/58 animals tested positive in at least one sample. While only a few samples proved positive for C. pecorum, sequencing of the 16S rRNA gene revealed a sequence identical to previously published sequences from specimens of German and Polish tortoises. Whole-genome sequences obtained from two conjunctival swab samples, as well as ANIb, TETRA values and a scheme based on 9 taxonomic marker genes revealed that the strain present in the Spanish tortoises represented a new yet non-classified species, with C. pecorum being its closest relative. We propose to designate the new species Candidatus Chlamydia testudinis.
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Affiliation(s)
- K Laroucau
- University Paris-Est, ANSES, Animal Health Laboratory, Bacterial Zoonoses Unit. Maisons-Alfort, France.
| | - N Ortega
- Departamento de Sanidad Animal, Facultad de Veterinaria, Campus Regional de Excelencia internacional, Campus Mare Nostrum, Universidad de Murcia, Spain
| | - F Vorimore
- University Paris-Est, ANSES, Animal Health Laboratory, Bacterial Zoonoses Unit. Maisons-Alfort, France
| | - R Aaziz
- University Paris-Est, ANSES, Animal Health Laboratory, Bacterial Zoonoses Unit. Maisons-Alfort, France
| | - A Mitura
- Department of Cattle and Sheep Diseases/Laboratory of Serological Diagnosis, National Veterinary Research Institute, Pulawy, Poland
| | - M Szymanska-Czerwinska
- Department of Cattle and Sheep Diseases/Laboratory of Serological Diagnosis, National Veterinary Research Institute, Pulawy, Poland
| | - M Cicerol
- Departamento de Sanidad Animal, Facultad de Veterinaria, Campus Regional de Excelencia internacional, Campus Mare Nostrum, Universidad de Murcia, Spain
| | - J Salinas
- Departamento de Sanidad Animal, Facultad de Veterinaria, Campus Regional de Excelencia internacional, Campus Mare Nostrum, Universidad de Murcia, Spain
| | - K Sachse
- Friedrich-Schiller-Universität Jena, Institut f. Bioinformatik, 07743 Jena, Germany
| | - M R Caro
- Departamento de Sanidad Animal, Facultad de Veterinaria, Campus Regional de Excelencia internacional, Campus Mare Nostrum, Universidad de Murcia, Spain
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Shivaprasad HL, Carnaccini S, Bland M, Aaziz R, Moeller R, Laroucau K. An Unusual Outbreak of Chlamydiosis in Commercial Turkeys Involving the Nasal Glands. Avian Dis 2015; 59:315-22. [PMID: 26473684 DOI: 10.1637/11006-123014-reg] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
An unusual outbreak of chlamydiosis was diagnosed in 15,000, 13-wk-old organically grown turkeys housed in a semiconfinement housing system. The disease was characterized by unilateral or bilateral swelling above the eye due to mild-to-severe inflammation of the nasal glands in 3%-5% of the birds. Except for a slight drop in feed and water consumption, the birds did not exhibit any respiratory signs, morbidity, and mortality. Chlamydiosis in the turkeys was confirmed by immunofluorescence, immunohistochemistry, and PCR assay of the nasal glands. Other samples such as conjunctiva, lungs, air sacs, heart, liver, spleen, and feces were negative for chlamydia by florescence antibody test in birds submitted over several weeks. Chlamydia psittaci strain B was isolated in chicken egg embryos and typed by multilocus sequence variable number of tandem repeats analysis, multilocus sequence typing, and ompA gene sequencing as a CP3-like strain. This is the first report of a naturally occurring chlamydiosis affecting the nasal glands in turkeys.
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Affiliation(s)
- H L Shivaprasad
- A California Animal Health and Food Safety Laboratory System, Tulare Branch, University of California-Davis, 18830 Road 112, Tulare, CA 93274
| | - S Carnaccini
- A California Animal Health and Food Safety Laboratory System, Tulare Branch, University of California-Davis, 18830 Road 112, Tulare, CA 93274
| | - M Bland
- B Cutler Veterinary Associates International, 3562 Jomar, Napa, CA 94558
| | - R Aaziz
- C Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, 94706 Maisons-Alfort, France
| | - R Moeller
- A California Animal Health and Food Safety Laboratory System, Tulare Branch, University of California-Davis, 18830 Road 112, Tulare, CA 93274
| | - K Laroucau
- C Anses, Animal Health Laboratory, Bacterial Zoonoses Unit, 94706 Maisons-Alfort, France
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Laroucau K, Aaziz R, Meurice L, Servas V, Chossat I, Royer H, de Barbeyrac B, Vaillant V, Moyen JL, Meziani F, Sachse K, Rolland P. Outbreak of psittacosis in a group of women exposed to Chlamydia psittaci-infected chickens. ACTA ACUST UNITED AC 2015; 20. [PMID: 26111240 DOI: 10.2807/1560-7917.es2015.20.24.21155] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Eight cases of psittacosis due to Chlamydia psittaci were identified in May 2013 among 15 individuals involved in chicken gutting activities on a mixed poultry farm in France. All cases were women between 42 and 67 years-old. Cases were diagnosed by serology and PCR of respiratory samples. Appropriate treatment was immediately administered to the eight hospitalised individuals after exposure to birds had been discovered. In the chicken flocks, mainly C. gallinacea was detected, a new member of the family Chlamydiaceae, whereas the ducks were found to harbour predominantly C. psittaci, the classical agent of psittacosis. In addition, C. psittaci was found in the same flock as the chickens that the patients had slaughtered. Both human and C. psittaci-positive avian samples carried the same ompA genotype E/B of C. psittaci, which is widespread among French duck flocks. Repeated grassland rotations between duck and chicken flocks on the farm may explain the presence of C. psittaci in the chickens. Inspection by the veterinary service led to temporary closure of the farm. All birds had to be euthanised on site as no slaughterhouses accepted processing them. Farm buildings and grasslands were cleaned and/or disinfected before the introduction of new poultry birds.
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Affiliation(s)
- K Laroucau
- Anses, Laboratoire de Sante Animale, Unite Zoonoses Bacteriennes, Laboratoire National de Reference pour la Chlamydiose Aviaire, Maisons-Alfort, France
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Carlier L, Kempf M, Aaziz R, Jolivet‐Gougeon A, Laroucau K. A severe case of pneumopathy in a duck breeder due to Chlamydia psittaci diagnosed by 16S rDNA sequencing. JMM Case Rep 2014. [DOI: 10.1099/jmmcr.0.001537] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Affiliation(s)
- L. Carlier
- Département d’Anesthésie Réanimation, Plateau Technique Ouest, CHU, F‐49933 Angers, France
| | - M. Kempf
- Laboratoire de Bactériologie, Institut de Biologie en Santé – PBH, CHU, F‐49933 Angers, France
| | - R. Aaziz
- Anses, Laboratoire de santé animale, Unité Zoonoses bactériennes, F‐94706 Maisons‐Alfort
| | - A. Jolivet‐Gougeon
- EA 1254 Microbiologie, Université Rennes 1, Service de Bactériologie et Hygiène, CHU Rennes, F‐35043 Rennes, France
| | - K. Laroucau
- Anses, Laboratoire de santé animale, Unité Zoonoses bactériennes, F‐94706 Maisons‐Alfort
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Abstract
Plant cell-to-cell communication is achieved by membranous conduits called plasmodesmata, which bridge the cytoplasm of neighboring cells. A growing body of immunolocalization data shows an association of the cytoskeleton machinery with plasmodesmata. The role of the cytoskeleton in the plasmodesmata-mediated transport has been well documented for virus movement. Because viruses are known to exploit existing host pathways and because the cytoskeleton is involved in intracellular trafficking, the cytoskeleton is thought to drive and target macromolecules to plasmodesmata. It is this link between plasmodesmata and the cytoskeleton that will be described here.
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Affiliation(s)
- R Aaziz
- INRA-Laboratoire de Biologie Cellulaire, 78026 Cedex, Versailles, France.
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Teycheney PY, Aaziz R, Dinant S, Salánki K, Tourneur C, Balázs E, Jacquemond M, Tepfer M. Synthesis of (-)-strand RNA from the 3' untranslated region of plant viral genomes expressed in transgenic plants upon infection with related viruses. J Gen Virol 2000; 81:1121-6. [PMID: 10725441 DOI: 10.1099/0022-1317-81-4-1121] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
When expressed in transgenic tobacco plants, transgene mRNA that includes the 3' untranslated region (3' UTR) of Lettuce mosaic virus served as template for synthesis of complementary (-)-strand RNA following an infection by Tobacco etch virus, Tobacco vein mottle virus or Pepper mottle virus, but not when infected with Cucumber mosaic virus. Deletion of the 3' UTR from the transgene abolished the synthesis of (-)-strand transcripts. Similar results were obtained in transgenic tobacco plants expressing mRNA that includes the RNA3 3' UTR of Cucumber mosaic virus when infected with Tomato aspermy virus. These results show that the viral RNA-dependent RNA polymerase of several potyviruses and Tomato aspermy virus have the ability to recognize heterologous 3' UTRs when included in transgene mRNAs, and to use them as transcription promoters.
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Affiliation(s)
- P Y Teycheney
- INRA, Laboratoire de biologie cellulaire, F-78026 Versailles cedex, France.
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Abstract
Recombination is considered to play a key role in RNA virus evolution; however, little is known about its occurrence under natural conditions. We inoculated tobacco plants with wild-type strains of two closely related cucumovirus species: cucumber mosaic virus (CMV) and tomato aspermy virus (TAV). RNA from the inoculated leaves of doubly-infected plants was tested for the presence of recombination events in an 0.8-kb central portion of the viral RNA3. Using a sensitive and specific RT-PCR procedure, we amplified recombinant segments of RNA3 in 3 of 82 tobacco plants infected with both viruses. In each plant in which recombinant segments were amplified, several different crossover sites were observed, all of which were located within a short stretch of high sequence similarity. Two plants had both CMV-TAV and TAV-CMV recombinants. In all cases, precise homologous recombination had occurred. To the best of our knowledge, this is the first report of interspecific recombination between wild-type plant RNA viruses under conditions of minimal selection pressure in favor of the recombinants.
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Affiliation(s)
- R Aaziz
- Laboratoire de Biologie Cellulaire, INRA-Versailles, Versailles Cedex, 78026, France
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