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Sriraman N, Sarkar A, Naskar S, Mahajan N, Mukherjee O, Pradeep R, George M, Sarkar K. Immunomodulatory effects of Diospyros peregrina fruit preparation (DFP) in non-small cell lung cancer (NSCLC) by utilizing dendritic cell-mediated antigen presentation and T helper (TH) cell differentiation. Med Oncol 2024; 41:107. [PMID: 38580762 DOI: 10.1007/s12032-024-02331-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2023] [Accepted: 02/12/2024] [Indexed: 04/07/2024]
Abstract
Diospyros peregrina is a dioecious plant which is native to India. It belongs to the family of Ebenaceae and is extensively used to treat various ailments, such as leucorrhoea and other uterine-related problems. Though few studies have been on D. peregrina for their anti-tumour response, little is known. Therefore, this intrigued us to understand its immunomodulator capabilities on various types of cancer extensively. Our primary focus is on NSCLC (Non-Small Cell Lung Cancer), which is ranked as the second largest form of cancer in the world, and the treatments demand non-invasive agents to target NSCLC effectively. In an objective to generate an efficient Lung Cancer Associated Antigen (LCA) specific anti-tumour immune response, LCA was presented using dendritic cells (DCs) in the presence of D. peregrina fruit preparation (DFP). Moreover, we also investigated DFP's role in the differentiation of T-helper (TH) cells. Therefore, this study aimed at better LCA presentation mediated by DFP by activating the LCA pulsed DCs and T helper cell differentiation for better immune response. DCs were pulsed with LCA for tumour antigen presentation in vitro, with and without DFP. Differentially pulsed DCs were irradiated to co-culture with autologous and allogeneic lymphocytes. Extracellular supernatants were collected for the estimation of cytokine levels by ELISA. LDH release assay was performed to test Cytotoxic T lymphocytes (CTLs) mediated lung tumour cell cytotoxicity. Thus, DFP may be a potential vaccine to generate anti-LCA immune responses to restrict NSCLC.
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Affiliation(s)
- Nawaneetan Sriraman
- Department of Biotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India
| | - Ankita Sarkar
- Department of Biotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India
| | - Sohom Naskar
- Department of Biotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India
| | - Nitika Mahajan
- Department of Biotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India
| | - Oishi Mukherjee
- Department of Biotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India
| | - R Pradeep
- Department of Biotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India
| | - Melvin George
- Department of Clinical Pharmacology, SRM Medical College Hospital and Research Centre, Kattankulathur, Tamil Nadu, 603203, India
| | - Koustav Sarkar
- Department of Biotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India.
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Naskar S, Nandi G, Ghosh T. An examination of the reaction pathways of XO + O → X + O2 (X = Br and I). COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2022.113864] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Barman K, Konwar D, Sarma D, Thomas R, Naskar S, Pegu S, Banik S, Mohan N, Tamuli M, Kaushik P, Rajkhowa S. Effect of supplementation of methionine chelated trace minerals on growth, nutrient utilization and blood profiles in crossbred (Hampshire X Ghungroo) finisher pigs. ANIM NUTR FEED TECHN 2022. [DOI: 10.5958/0974-181x.2022.00003.8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Naskar S, Nandi G, Ghosh TK. Ab initio study of the mechanism of the reaction ClO + O --> Cl + O2. J MEX CHEM SOC 2021. [DOI: 10.29356/jmcs.v66i1.1628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Abstract. Ab initio investigation on the reaction mechanism of ClO + O --> Cl + O2 reaction has been performed using correlation consistent triple zeta basis set. The geometry and frequency of the reactants, products, minimum energy geometries and transition states are obtained using MP2 method and energetics are obtained at the QCISD(T)//MP2 level of theory. Primarily, a possible reaction mechanism is obtained on the basis on IRC calculations using MP2 level of theory. To obtain true picture of the reaction path, we performed IRC calculations using CASSCF method with a minimal basis set 6-31G**. Some new equilibrium geometries and transition states have been identified at the CASSCF level. Energetics are also obtained at the QCISD(T)//CASSCF method. Possible reaction paths have been discussed, which are new in literature. Heat of reaction is found to be consistent with the experimental data. Bond dissociation energies to various dissociation paths are also reported.
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Kedare GM, . V, Karunakaran M, Mandal A, Ghosh MK, Naskar S. Effect of area specific mineral mixture supplementation on milk production, biochemical and blood mineral status of Black Bengal goats. IJDS 2021. [DOI: 10.33785/ijds.2021.v74i02.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Mukhopadhyay T, Naskar S, Gupta KK, Kumar R, Dey S, Adhikari S. Probing the Stochastic Dynamics of Coronaviruses: Machine Learning Assisted Deep Computational Insights with Exploitable Dimensions. Adv Theory Simul 2021. [DOI: 10.1002/adts.202000291] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- T. Mukhopadhyay
- Department of Aerospace Engineering Indian Institute of Technology Kanpur Kanpur India
| | - S. Naskar
- Department of Aerospace Engineering Indian Institute of Technology Bombay Mumbai India
| | - K. K. Gupta
- Department of Mechanical Engineering National Institute of Technology Silchar Silchar India
| | - R. Kumar
- Department of Mechanical Engineering National Institute of Technology Silchar Silchar India
| | - S. Dey
- Department of Mechanical Engineering National Institute of Technology Silchar Silchar India
| | - S. Adhikari
- College of Engineering Swansea University Swansea United Kingdom
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Mukhopadhyay T, Mahata A, Naskar S, Adhikari S. Probing the Effective Young's Modulus of ‘Magic Angle’ Inspired Multi‐Functional Twisted Nano‐Heterostructures. Adv Theory Simul 2020. [DOI: 10.1002/adts.202000129] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- T. Mukhopadhyay
- Department of Aerospace Engineering Indian Institute of Technology Kanpur Kanpur India
| | - A. Mahata
- School of Engineering Brown University Providence Rhode Island USA
| | - S. Naskar
- Department of Aerospace Engineering Indian Institute of Technology Bombay Bombay India
| | - S. Adhikari
- College of Engineering Swansea University Swansea UK
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Vashi Y, Naskar S, Chutia T, Banik S, Singh AK, Goswami J, Sejian V. Comparative assessment of native, crossbred and exotic pigs during different seasons (winter, spring and summer) based on rhythmic changes in the levels of serum cortisol, lactate dehydrogenase levels and PBMC HSP70 mRNA expression pattern. BIOL RHYTHM RES 2018. [DOI: 10.1080/09291016.2017.1410019] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Y. Vashi
- ICAR-National Research Centre on Pig, Guwahati, India
- Department of Biotechnology, Assam Don Bosco University, Sonapur, India
| | - S. Naskar
- ICAR-National Research Centre on Pig, Guwahati, India
- ICAR-Indian Institute of Agricultural Biotechnology, Ranchi, India
| | - T. Chutia
- ICAR-National Research Centre on Pig, Guwahati, India
| | - S. Banik
- ICAR-National Research Centre on Pig, Guwahati, India
| | - A. K. Singh
- ICAR-National Research Centre on Pig, Guwahati, India
| | - J. Goswami
- College of Veterinary Science, Assam Agricultural University, Guwahati, India
| | - V. Sejian
- ICAR-National Institute of Animal Nutrition and Physiology, Bengaluru, India
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Singh AK, Naskar S, Saikia B, Vashi Y, Gupta S, Banik S, Tamuli MK, Pande V, Sarma DK, Dhara SK. Effect of testicular tissue lysate on developmental competence of porcine oocytes matured and fertilized in vitro. Reprod Domest Anim 2016; 52:183-188. [PMID: 27862454 DOI: 10.1111/rda.12875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2016] [Accepted: 09/21/2016] [Indexed: 11/29/2022]
Abstract
The objective of the present study was to investigate the effect of testicular tissue lysate (TTL) on developmental competence of germinal vesicle (GV) stage porcine oocytes. Two types of TTL were prepared through repeated freeze-thaw in liquid nitrogen, one from whole testicular tissue (wTTL) and other from either of four different sections of testes, namely just beneath the tunica albuginea (TA), from the transitional area between the seminiferous cord/tubules and the mediastinum testis (TR) and from the intermediate area (parenchymal tissue origin) and CE (cauda epididymis origin). The whole or section-wise TTL treatments were given for 44 hr during in vitro maturation (IVM). Oocyte maturation was done in either of the two media, namely defined (high-performance basic medium for porcine oocyte maturation, commercially available) and serum containing (TCM199). After maturation, oocytes were co-incubated with fresh spermatozoa for 6 hr and then transferred to embryo culture media. Treatment of GV stage oocytes with wTTL (1 mg/ml) increased the cleavage and morula percentage rate (69.23 ± 6.23 and 48.15 ± 6.77, respectively) than that of their control (58.33 ± 8.08 and 32.54 ± 5.53, respectively) in defined media, and in serum-containing media, cleavage and morula percentage rate were almost equal in both treatment (54.56 ± 7.79 and 34.70 ± 6.78, respectively) and control (59.52 ± 8.21 and 38.52 ± 6.54, respectively). However, effect of wTTL was not significant. In case of section-wise TTL supplements, TR section significantly (p < .01) improved cleavage and morula rate (58.43 ± 7.98 and 36.14 ± 6.89, respectively) followed by TA. In conclusion, present study indicates that IVM, in vitro fertilization and in vitro culture of embryo are improved in the presence of TTL, particularly its TR section. Further study is expected to reveal the principal components of TTL which may prove useful for IVM.
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Affiliation(s)
- A K Singh
- ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India.,Department of Biotechnology, Kumaun University, Nainital, Uttarakhand, India
| | - S Naskar
- ICAR-National Research Centre on Pig, Guwahati, Assam, India.,ICAR-Indian Institute of Agricultural Biotechnology, Ranchi, Jharkhand, India
| | - B Saikia
- ICAR-National Research Centre on Pig, Guwahati, Assam, India
| | - Y Vashi
- ICAR-National Research Centre on Pig, Guwahati, Assam, India
| | - S Gupta
- ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
| | - S Banik
- ICAR-National Research Centre on Pig, Guwahati, Assam, India
| | - M K Tamuli
- ICAR-National Research Centre on Pig, Guwahati, Assam, India
| | - V Pande
- Department of Biotechnology, Kumaun University, Nainital, Uttarakhand, India
| | - D K Sarma
- ICAR-National Research Centre on Pig, Guwahati, Assam, India
| | - S K Dhara
- ICAR-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, India
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Paul A, Dangi S, Gupta M, Singh J, Thakur N, Naskar S, Nanda P, Mohanty N, Das A, Bandopadhayay S, Das B, Sarkar M. Expression of TLR genes in Black Bengal goat (Capra hircus) during different seasons. Small Rumin Res 2015. [DOI: 10.1016/j.smallrumres.2015.01.011] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Naskar S, Borah S, Vashi Y, Thomas R, Dhara S, Banik S. Evaluation of pig rearing farmers of North East India as prospective breeder: A retrospective analysis. INDIAN J ANIM RES 2015. [DOI: 10.5958/0976-0555.2015.00025.4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Jana TK, Naskar S, Paul S, Sarkar B, Saha J. Handling machine breakdown for dynamic scheduling by a colony of cognitive agents in a holonic manufacturing framework. 10 5267/j dsl 2015. [DOI: 10.5267/j.dsl.2015.5.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Nayak MK, Agrawal AS, Bose S, Naskar S, Bhowmick R, Chakrabarti S, Sarkar S, Chawla-Sarkar M. Antiviral activity of baicalin against influenza virus H1N1-pdm09 is due to modulation of NS1-mediated cellular innate immune responses. J Antimicrob Chemother 2014; 69:1298-310. [DOI: 10.1093/jac/dkt534] [Citation(s) in RCA: 76] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023] Open
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Chowdhury P, Hari R, Chakraborty B, Mandal B, Naskar S, Das N. Isolation, culture optimization and physico-chemical characterization of laccase enzyme from Pleurotus fossulatus. Pak J Biol Sci 2014; 17:173-181. [PMID: 24783799 DOI: 10.3923/pjbs.2014.173.181] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Pleurotus fossulatus (Cooke) Sace is member of oyster mushroom can produced extracellular laccase (benzenediol: oxygen oxidoreductase; EC 1.10.3.2) in submerged fermentation. To analyze the optimum production for laccase P. fossulatus was cultured both in stationary and shaking condition in different media. Partial purification of laccase was done after 0-80% ammonium sulphate precipitation, followed by DEAE (Diethylaminoethyl) Sephadex (A-50) anion exchange chromatography. Potato-sucrose peptone (PSP) medium and Potato-dextrose (PD) medium showed highest laccase production in shaking and stationary conditions, respectively. Though the time required for optimum laccase production in stationary condition was much more than the shaking condition but the amount of laccase was about 2.75t greater in former condition. The laccase produced in stationary condition was more stable than the enzyme produced in shaking condition. The partially purified enzyme showed highest affinity towards o-dianisidine than guaiacol and ABTS (2,2'-Azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) as evidenced by their K(m). The physico-chemical properties of the laccase suggested the significance of this enzyme in industrial applications.
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Borah S, Sarmah B, Chakravarty P, Naskar S, Dutta D, Kalita D. Effect of zinc supplementation on serum biochemicals in grower pig. Journal of Applied Animal Research 2013. [DOI: 10.1080/09712119.2013.824888] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Mitra A, Basak T, Datta K, Naskar S, Sengupta S, Sarkar S. Role of α-crystallin B as a regulatory switch in modulating cardiomyocyte apoptosis by mitochondria or endoplasmic reticulum during cardiac hypertrophy and myocardial infarction. Cell Death Dis 2013; 4:e582. [PMID: 23559016 PMCID: PMC3641337 DOI: 10.1038/cddis.2013.114] [Citation(s) in RCA: 90] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Cardiac hypertrophy and myocardial infarction (MI) are two major causes of heart failure with different etiologies. However, the molecular mechanisms associated with these two diseases are not yet fully understood. So, this study was designed to decipher the process of cardiomyocyte apoptosis during cardiac hypertrophy and MI in vivo. Our study revealed that mitochondrial outer membrane channel protein voltage-dependent anion channel-1 (VDAC1) was upregulated exclusively during cardiac hypertrophy, whereas 78 kDa glucose-regulated protein (GRP78) was exclusively upregulated during MI, which is an important upstream regulator of the endoplasmic reticulum (ER) stress pathway. Further downstream analysis revealed that mitochondrial pathway of apoptosis is instrumental in case of hypertrophy, whereas ER stress-induced apoptosis is predominant during MI, which was confirmed by treatment with either siRNA against VDAC1 or ER stress inhibitor tauroursodeoxycholic acid (TUDCA). Very interestingly, our data also showed that the expression and interaction of small heat-shock protein α-crystallin B (CRYAB) with VDAC1 was much more pronounced during MI compared with either hypertrophy or control. The study demonstrated for the first time that two different organelles—mitochondria and ER have predominant roles in mediating cardiomyocyte death signaling during hypertrophy and MI, respectively, and activation of CRYAB acts as a molecular switch in bypassing mitochondrial pathway of apoptosis during MI.
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Affiliation(s)
- A Mitra
- Department of Zoology, University of Calcutta, 35, B.C. Road, Kolkata 700 019, India
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Das M, Laha R, Devi P, Bordoloi RK, Naskar S. Sarcoptic mange infestation in pigs in a hilly region of Meghalaya. Trop Anim Health Prod 2009; 42:1009-11. [PMID: 20041347 DOI: 10.1007/s11250-009-9523-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/09/2009] [Indexed: 11/29/2022]
Abstract
Skin lesions were collected from 15 adult crossbred pigs maintained at the pig farm of ICAR Research Complex for the North-Eastern Hill Region, Umiam, a hilly region of the state of Meghalaya, India. Skin scrapings of these 15 animals were examined by KOH digestion method. Presence of mites were detected in five animals which were indistinguishable from Sarcoptes scabiei var. suis. Infected pigs were treated with a single dose of Ivermectin at 200 ug/kg body weight, subcutaneously. No mites were recovered from treated pigs after a period of 10 days of post-treatment. The presence of S. scabiei var. suis in pigs from this part of the country has never been reported. This infestation has great significance because it affects the growth rate and feed conversion significantly, specially to the grower and weaned pigs. It can be concluded that S. scabiei var. suis infestation is prevalent in hilly region of Meghalaya. The pig producers are generally unaware about the severity of the problem of mite infestation, so precaution should be taken to prevent their valuable pigs from S. scabiei var. suis infestation.
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Affiliation(s)
- M Das
- Division of Veterinary Parasitology, ICAR Research Complex for NEH Region, Umroi Road, Umiam, Meghalaya, 793 103, India
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Kumaresan A, Kadirvel G, Bujarbaruah K, Bardoloi R, Das A, Kumar S, Naskar S. Preservation of boar semen at 18°C induces lipid peroxidation and apoptosis like changes in spermatozoa. Anim Reprod Sci 2009; 110:162-71. [DOI: 10.1016/j.anireprosci.2008.01.006] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2007] [Revised: 01/10/2008] [Accepted: 01/13/2008] [Indexed: 11/30/2022]
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Hering J, Rottmann M, Hempel F, Naskar S, Angelkort B. Langzeitergebnisse nach primär erfolgreicher transluminaler percutaner Angioplastie (PTA) von Unterschenkelarterien beim diabetischen Fußsyndrom. DIABETOL STOFFWECHS 2006. [DOI: 10.1055/s-2006-943918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Naskar S, Biswas S, Mishra D, Adhikary B, Falvello L, Soler T, Schwalbe C, Chattopadhyay S. Studies on the relative stabilities of Mn(II) and Mn(III) in complexes with N4O2 donor environments: crystal structures of [Mn(pybzhz)2] and [Mn(Ophsal)(imzH)2] ClO4 (pybzhz=N-(benzoyl)-N′-(picolinylidene) hydrazine, Ophsal=N,N′-o-phenylenebis(salicylideneimine), imzH=imidazole). Inorganica Chim Acta 2004. [DOI: 10.1016/j.ica.2004.06.018] [Citation(s) in RCA: 64] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Naskar S, Nanda DK. Cytomorphology of the ring gland and its relation with the stomatogastric nervous system in adult fly, Chrysomyia megacephala (Diptera: Calliphoridae). CYTOLOGIA 1975; 40:277-84. [PMID: 1157524 DOI: 10.1508/cytologia.40.277] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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