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Shiravani G, Oberrecht D, Roscher L, Kernchen S, Halbach M, Gerriets M, Scholz-Böttcher BM, Gerdts G, Badewien TH, Wurpts A. Numerical modeling of microplastic interaction with fine sediment under estuarine conditions. Water Res 2023; 231:119564. [PMID: 36680823 DOI: 10.1016/j.watres.2022.119564] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 12/19/2022] [Accepted: 12/31/2022] [Indexed: 06/17/2023]
Abstract
Microplastic (MP) pollution is an important challenge for human life which has consequently affected the natural system of other organisms. Mismanagement and also careless handling of plastics in daily life has led to an accelerating contamination of air, water and soil compartments with MP. Under estuarine conditions, interactions with suspended particulate matter (SPM) like fine sediment in the water column play an important role on the fate of MP. Further studies to better understand the corresponding transport and accumulation mechanisms are required. This paper aims at providing a new modeling approach improving the MP settling velocity formulation based on higher suspended fine sediment concentrations, as i.e. existent in estuarine turbidity zones (ETZ). The capability of the suggested approach is examined through the modeling of released MP transport in water and their interactions with fine sediment (cohesive sediment/fluid mud). The model results suggest higher concentrations of MP in ETZ, both in the water column as well as the bed sediment, which is also supported by measurements. The key process in the modeling approach is the integration of small MP particles into estuarine fine sediment aggregates. This is realized by means of a threshold sediment concentration, above which the effective MP settling velocity increasingly approaches that of the sediment aggregates. The model results are in good agreement with measured MP mass concentrations. Moreover, the model results also show that lighter small MP particles can easier escape the ETZ towards the open sea.
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Affiliation(s)
- G Shiravani
- Lower Saxony Water Management, Coastal Protection and Nature Conservation Agency (NLWKN), D-26506, Norden, Germany.
| | - D Oberrecht
- Lower Saxony Water Management, Coastal Protection and Nature Conservation Agency (NLWKN), D-26506, Norden, Germany
| | - L Roscher
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, D-27483, Helgoland, Germany
| | - S Kernchen
- University of Bayreuth, Department of Atmospheric Chemistry, 95440, Bayreuth, Germany
| | - M Halbach
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26129, Oldenburg, Germany
| | - M Gerriets
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26129, Oldenburg, Germany
| | - B M Scholz-Böttcher
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26129, Oldenburg, Germany
| | - G Gerdts
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, D-27483, Helgoland, Germany
| | - T H Badewien
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26129, Oldenburg, Germany
| | - A Wurpts
- Lower Saxony Water Management, Coastal Protection and Nature Conservation Agency (NLWKN), D-26506, Norden, Germany
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Meyerjürgens J, Schöneich-Argent RI, Badewien TH. An exploratory analysis of seabed litter dynamics in the SE German Bight. Mar Pollut Bull 2022; 177:113515. [PMID: 35278906 DOI: 10.1016/j.marpolbul.2022.113515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Revised: 02/25/2022] [Accepted: 02/27/2022] [Indexed: 06/14/2023]
Abstract
The accumulation of marine litter on coastal seabeds is influenced by various anthropogenic and environmental factors. To identify litter accumulation areas on the seafloor, it is necessary to understand the interaction of these parameters. This study analyses the seafloor litter occurrence in the southeastern North Sea, based on samples collected between October 2017 and March 2019. Litter data were combined with hydrographic, high-resolution in situ measurements and further geographic as well as anthropogenic factors for statistical analyses. Benthic litter showed a mean density of 2473 ± 3116 items km-2, and plastics consisting mainly of fisheries-related items represented the majority of identified objects. The statistical analyses suggest that salinity and temperature gradients, the meridional bottom currents, as well as the distance of the station to the coastline have a significant effect on benthic litter abundance. Direct combination of litter sampling and hydrographic measurements can improve the understanding of seabed litter dynamics.
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Affiliation(s)
- Jens Meyerjürgens
- Carl von Ossietzky University of Oldenburg, Institute for Chemistry and Biology of the Marine Environment (ICBM), ICBM Wilhelmshaven, 26382 Wilhelmshaven, Germany.
| | - Rosanna Isabel Schöneich-Argent
- Carl von Ossietzky University of Oldenburg, Institute for Chemistry and Biology of the Marine Environment (ICBM), ICBM Wilhelmshaven, 26382 Wilhelmshaven, Germany; Bund für Umwelt und Naturschutz Deutschland (BUND) e.V. - Friends of the Earth Germany, Landesverband Niedersachsen e.V., Postfach 1106, 30011 Hannover, Germany
| | - Thomas H Badewien
- Carl von Ossietzky University of Oldenburg, Institute for Chemistry and Biology of the Marine Environment (ICBM), ICBM Wilhelmshaven, 26382 Wilhelmshaven, Germany
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3
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Dlugosch L, Poehlein A, Wemheuer B, Pfeiffer B, Badewien TH, Daniel R, Simon M. Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome. Nat Commun 2022; 13:456. [PMID: 35075131 PMCID: PMC8786918 DOI: 10.1038/s41467-022-28128-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Accepted: 01/06/2022] [Indexed: 01/21/2023] Open
Abstract
Microbial communities are major drivers of global elemental cycles in the oceans due to their high abundance and enormous taxonomic and functional diversity. Recent studies assessed microbial taxonomic and functional biogeography in global oceans but microbial functional biogeography remains poorly studied. Here we show that in the near-surface Atlantic and Southern Ocean between 62°S and 47°N microbial communities exhibit distinct taxonomic and functional adaptations to regional environmental conditions. Richness and diversity showed maxima around 40° latitude and intermediate temperatures, especially in functional genes (KEGG-orthologues, KOs) and gene profiles. A cluster analysis yielded three clusters of KOs but five clusters of genes differing in the abundance of genes involved in nutrient and energy acquisition. Gene profiles showed much higher distance-decay rates than KO and taxonomic profiles. Biotic factors were identified as highly influential in explaining the observed patterns in the functional profiles, whereas temperature and biogeographic province mainly explained the observed taxonomic patterns. Our results thus indicate fine-tuned genetic adaptions of microbial communities to regional biotic and environmental conditions in the Atlantic and Southern Ocean. The taxonomic and functional diversity of marine microbial communities are shaped by both environmental and biotic factors. Here, the authors investigate the functional biogeography of epipelagic prokaryotic communities along a 13,000-km transect in the Southern and Atlantic Oceans, showing finely tuned genetic adaptations to regional conditions.
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Affiliation(s)
- Leon Dlugosch
- Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Carl von Ossietzky Str. 9-11, D-26129, Oldenburg, Germany
| | - Anja Poehlein
- Department of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Grisebachstr. 8, D-37077, Göttingen, Germany
| | - Bernd Wemheuer
- Department of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Grisebachstr. 8, D-37077, Göttingen, Germany
| | - Birgit Pfeiffer
- Department of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Grisebachstr. 8, D-37077, Göttingen, Germany
| | - Thomas H Badewien
- Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Carl von Ossietzky Str. 9-11, D-26129, Oldenburg, Germany
| | - Rolf Daniel
- Department of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Grisebachstr. 8, D-37077, Göttingen, Germany
| | - Meinhard Simon
- Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Carl von Ossietzky Str. 9-11, D-26129, Oldenburg, Germany. .,Helmholtz Institute for Functional Marine Biodiversity at the University of Oldenburg (HIFMB), Ammerländer Heerstr. 231, D-26129, Oldenburg, Germany.
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Roscher L, Fehres A, Reisel L, Halbach M, Scholz-Böttcher B, Gerriets M, Badewien TH, Shiravani G, Wurpts A, Primpke S, Gerdts G. Microplastic pollution in the Weser estuary and the German North Sea. Environ Pollut 2021; 288:117681. [PMID: 34284208 DOI: 10.1016/j.envpol.2021.117681] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2021] [Revised: 06/22/2021] [Accepted: 06/28/2021] [Indexed: 06/13/2023]
Abstract
Microplastics (MP) are defined as synthetic organic pollutants sized <5 mm and have been recorded in various environments worldwide. Due to their small size, they pose a potential risk for many organisms throughout the food web. However, little is known about MP distribution patterns and associated transport mechanisms. Rivers may act as pathways for MP into marine environments. In this study, we investigate the occurrence of MP in the estuary and lower stretch of the second-largest German River, the Weser, representative of a significant interface between fresh water and marine environments. The aim of the study was to enhance the general understanding by providing novel, comprehensive data and suggestions for future studies on estuarine systems. Surface water samples of two different size classes were collected by ship using an on-board filtration system (11-500 μm fraction) and net sampling (500-5000 μm fraction). After a thorough sample preparation, all samples were analysed with Focal Plane Array (FPA) Fourier Transform Infrared (FTIR) spectroscopy and Attenuated Total Reflection (ATR) FTIR spectroscopy in order to obtain information on MP concentrations, polymer composition and size distribution. Our findings show highest concentrations in the 11-500 μm fraction (2.3 × 101 - 9.7 × 103 MP m-3), with the polymer cluster acrylates/polyurethanes(PUR)/varnish being dominant. The >500 μm fraction was dominated by polyethylene. Estimated MP concentrations generally increased in the Turbidity Maximum Zone (TMZ) and decreased towards the open sea. This study contributes to the current research by providing novel insights into the MP pollution of the estuary and lower stretch of an important European river and provides implications for future MP monitoring measures.
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Affiliation(s)
- Lisa Roscher
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, D-27483, Helgoland, Germany.
| | - Annika Fehres
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, D-27483, Helgoland, Germany
| | - Lorenz Reisel
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, D-27483, Helgoland, Germany
| | - Maurits Halbach
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26111, Oldenburg, Germany
| | - Barbara Scholz-Böttcher
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26111, Oldenburg, Germany
| | - Michaela Gerriets
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26111, Oldenburg, Germany
| | - Thomas H Badewien
- Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, D-26111, Oldenburg, Germany
| | - Gholamreza Shiravani
- Lower Saxony Water Management, Coastal Defence and Nature Conservation Agency (NLWKN), D-26506, Norden, Germany
| | - Andreas Wurpts
- Lower Saxony Water Management, Coastal Defence and Nature Conservation Agency (NLWKN), D-26506, Norden, Germany
| | - Sebastian Primpke
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, D-27483, Helgoland, Germany
| | - Gunnar Gerdts
- Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, D-27483, Helgoland, Germany
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Monti-Birkenmeier M, Diociaiuti T, Badewien TH, Schulz AC, Friedrichs A, Meyer B. Spatial distribution of microzooplankton in different areas of the northern Antarctic Peninsula region, with an emphasis on tintinnids. Polar Biol 2021. [DOI: 10.1007/s00300-021-02910-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
AbstractThe Western Antarctic Peninsula (WAP) is experiencing rapid climate warming, resulting in affecting the marine food web. To investigate the microzooplankton spatial distribution and to assess how climate change could affect the tintinnids community, sea water samples were collected during late summer 2018 at 19 stations in three different areas: Deception Island, Elephant Island and Antarctic Sound. The microzooplankton community comprised mainly tintinnids, aloricate ciliates, heterotrophic dinoflagellates and micrometazoans. Microzooplankton abundance varied between 3 and 109 ind. L−1 and biomass ranged from 0.009 to 2.55 µg C L−1. Significant differences in terms of abundance and taxonomic composition of microzooplankton were found among the three sampling areas. Deception Island area showed 44% of tintinnids and the rest were heterotrophic dinoflagellate, aloricate ciliates and micrometazoans. In Elephant Island and Antarctic Sound areas, tintinnids reached, respectively, 73% and 83% of the microzooplankton composition, with all the other groups varying between 20 and 30%. Tintinnids were the most representative group in the area, with the species Codonellopsis balechi, Codonellopsis glacialis, Cymatocylis convallaria and Cymatocylis drygalskii. The highest amounts of tintinnids were found at the surface and 100 m depth. The above mentioned species may be considered key species for the WAP and therefore they can be used to track environmental and hydrographical changes in the area. In late summer, microzooplankton presented low abundances and biomass, nevertheless they represented an important fraction of the planktonic community in the area.
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Mustaffa NIH, Badewien TH, Ribas-Ribas M, Wurl O. High-resolution observations on enrichment processes in the sea-surface microlayer. Sci Rep 2018; 8:13122. [PMID: 30177725 PMCID: PMC6120901 DOI: 10.1038/s41598-018-31465-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2018] [Accepted: 08/21/2018] [Indexed: 01/16/2023] Open
Abstract
For decades, researchers assumed that enrichment of dissolved organic matter (DOM) in the sea surface microlayer (SML) is solely controlled by changes in the DOM concentration at this uppermost thin boundary layer between the ocean and the atmosphere. We conducted high-resolution observations of fluorescent-DOM (FDOM) at 13 stations in the coastal and open Atlantic Ocean to understand the enrichment processes. Results show that FDOM enrichment in the SML varied between 0.8 and 2.0 (in comparison to the concentrations in the underlying water; ULW), and FDOM enrichment is a common feature of the SML despite the varied distances to the terrestrial sources. At six stations, the FDOM concentration in the SML was less variable over the sampling period (>5 h) compared to FDOM concentrations in the ULW characterized with sudden changes. Even so we observed slightly lower enrichments with increasing wind speeds and solar radiation, changes in ULW concentrations forced the enrichment to change. In addition, we found evidences for the occurrence of photochemical degradation of FDOM in near-shore SML with implications on coastal carbon cycling. Overall, the results show that the processes leading to the enrichment of DOM in the SML are more complex than previously assumed. Given the importance of the organic-rich SML as a diffusion layer in the air-sea exchange of climate-relevant gases and heat, understanding the layer's enrichment processes is crucial.
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Affiliation(s)
- Nur Ili Hamizah Mustaffa
- Institute for Chemistry and Biology of the Marine Environment, Carl Von Ossietzky Universität Oldenburg, 26382, Wilhelmshaven, Germany.
| | - Thomas H Badewien
- Institute for Chemistry and Biology of the Marine Environment, Carl Von Ossietzky Universität Oldenburg, 26382, Wilhelmshaven, Germany
| | - Mariana Ribas-Ribas
- Institute for Chemistry and Biology of the Marine Environment, Carl Von Ossietzky Universität Oldenburg, 26382, Wilhelmshaven, Germany
| | - Oliver Wurl
- Institute for Chemistry and Biology of the Marine Environment, Carl Von Ossietzky Universität Oldenburg, 26382, Wilhelmshaven, Germany
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Pohlner M, Degenhardt J, von Hoyningen-Huene AJE, Wemheuer B, Erlmann N, Schnetger B, Badewien TH, Engelen B. The Biogeographical Distribution of Benthic Roseobacter Group Members along a Pacific Transect Is Structured by Nutrient Availability within the Sediments and Primary Production in Different Oceanic Provinces. Front Microbiol 2017; 8:2550. [PMID: 29326679 PMCID: PMC5741685 DOI: 10.3389/fmicb.2017.02550] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2017] [Accepted: 12/08/2017] [Indexed: 01/30/2023] Open
Abstract
By now, only limited information on the Roseobacter group thriving at the seafloor is available. Hence, the current study was conducted to determine their abundance and diversity within Pacific sediments along the 180° meridian. We hypothesize a distinct biogeographical distribution of benthic members of the Roseobacter group linked to nutrient availability within the sediments and productivity of the water column. Lowest cell numbers were counted at the edge of the south Pacific gyre and within the north Pacific gyre followed by an increase to the north with maximum values in the highly productive Bering Sea. Specific quantification of the Roseobacter group revealed on average a relative abundance of 1.7 and 6.3% as determined by catalyzed reported deposition-fluorescence in situ hybridization (CARD-FISH) and quantitative PCR (qPCR), respectively. Corresponding Illumina tag sequencing of 16S rRNA genes and 16S rRNA transcripts showed different compositions containing on average 0.7 and 0.9% Roseobacter-affiliated OTUs of the DNA- and RNA-based communities. These OTUs were mainly assigned to uncultured members of the Roseobacter group. Among those with cultured representatives, Sedimentitalea and Sulfitobacter made up the largest proportions. The different oceanic provinces with low nutrient content such as both ocean gyres were characterized by specific communities of the Roseobacter group, distinct from those of the more productive Pacific subarctic region and the Bering Sea. However, linking the community structure to specific metabolic processes at the seafloor is hampered by the dominance of so-far uncultured members of the Roseobacter group, indicating a diversity that has yet to be explored.
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Affiliation(s)
- Marion Pohlner
- Paleomicrobiology Group, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany
| | - Julius Degenhardt
- Paleomicrobiology Group, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany
| | - Avril J E von Hoyningen-Huene
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, University of Göttingen, Göttingen, Germany
| | - Bernd Wemheuer
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, University of Göttingen, Göttingen, Germany
| | - Nora Erlmann
- Microbiogeochemistry Group, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany
| | - Bernhard Schnetger
- Microbiogeochemistry Group, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany
| | - Thomas H Badewien
- Group "Marine Sensor Systems", Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany
| | - Bert Engelen
- Paleomicrobiology Group, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany
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Milici M, Deng ZL, Tomasch J, Decelle J, Wos-Oxley ML, Wang H, Jáuregui R, Plumeier I, Giebel HA, Badewien TH, Wurst M, Pieper DH, Simon M, Wagner-Döbler I. Co-occurrence Analysis of Microbial Taxa in the Atlantic Ocean Reveals High Connectivity in the Free-Living Bacterioplankton. Front Microbiol 2016; 7:649. [PMID: 27199970 PMCID: PMC4858663 DOI: 10.3389/fmicb.2016.00649] [Citation(s) in RCA: 73] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2015] [Accepted: 04/18/2016] [Indexed: 12/04/2022] Open
Abstract
We determined the taxonomic composition of the bacterioplankton of the epipelagic zone of the Atlantic Ocean along a latitudinal transect (51°S–47°N) using Illumina sequencing of the V5-V6 region of the 16S rRNA gene and inferred co-occurrence networks. Bacterioplankon community composition was distinct for Longhurstian provinces and water depth. Free-living microbial communities (between 0.22 and 3 μm) were dominated by highly abundant and ubiquitous taxa with streamlined genomes (e.g., SAR11, SAR86, OM1, Prochlorococcus) and could clearly be separated from particle-associated communities which were dominated by Bacteroidetes, Planktomycetes, Verrucomicrobia, and Roseobacters. From a total of 369 different communities we then inferred co-occurrence networks for each size fraction and depth layer of the plankton between bacteria and between bacteria and phototrophic micro-eukaryotes. The inferred networks showed a reduction of edges in the deepest layer of the photic zone. Networks comprised of free-living bacteria had a larger amount of connections per OTU when compared to the particle associated communities throughout the water column. Negative correlations accounted for roughly one third of the total edges in the free-living communities at all depths, while they decreased with depth in the particle associated communities where they amounted for roughly 10% of the total in the last part of the epipelagic zone. Co-occurrence networks of bacteria with phototrophic micro-eukaryotes were not taxon-specific, and dominated by mutual exclusion (~60%). The data show a high degree of specialization to micro-environments in the water column and highlight the importance of interdependencies particularly between free-living bacteria in the upper layers of the epipelagic zone.
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Affiliation(s)
- Mathias Milici
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Zhi-Luo Deng
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Jürgen Tomasch
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Johan Decelle
- UMR 7144 - Sorbonne Universités, UPMC Univ Paris 06Roscoff, France; Centre National de la Recherche Scientifique, UMR 7144Roscoff, France
| | - Melissa L Wos-Oxley
- Group Microbial Interactions and Processes, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Hui Wang
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Ruy Jáuregui
- Group Microbial Interactions and Processes, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Iris Plumeier
- Group Microbial Interactions and Processes, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Helge-Ansgar Giebel
- Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Thomas H Badewien
- Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Mascha Wurst
- Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Dietmar H Pieper
- Group Microbial Interactions and Processes, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Meinhard Simon
- Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Irene Wagner-Döbler
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
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Milici M, Tomasch J, Wos-Oxley ML, Decelle J, Jáuregui R, Wang H, Deng ZL, Plumeier I, Giebel HA, Badewien TH, Wurst M, Pieper DH, Simon M, Wagner-Döbler I. Bacterioplankton Biogeography of the Atlantic Ocean: A Case Study of the Distance-Decay Relationship. Front Microbiol 2016; 7:590. [PMID: 27199923 PMCID: PMC4845060 DOI: 10.3389/fmicb.2016.00590] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Accepted: 04/11/2016] [Indexed: 11/13/2022] Open
Abstract
In order to determine the influence of geographical distance, depth, and Longhurstian province on bacterial community composition and compare it with the composition of photosynthetic micro-eukaryote communities, 382 samples from a depth-resolved latitudinal transect (51°S–47°N) from the epipelagic zone of the Atlantic ocean were analyzed by Illumina amplicon sequencing. In the upper 100 m of the ocean, community similarity decreased toward the equator for 6000 km, but subsequently increased again, reaching similarity values of 40–60% for samples that were separated by ~12,000 km, resulting in a U-shaped distance-decay curve. We conclude that adaptation to local conditions can override the linear distance-decay relationship in the upper epipelagial of the Atlantic Ocean which is apparently not restrained by barriers to dispersal, since the same taxa were shared between the most distant communities. The six Longhurstian provinces covered by the transect were comprised of distinct microbial communities; ~30% of variation in community composition could be explained by province. Bacterial communities belonging to the deeper layer of the epipelagic zone (140–200 m) lacked a distance-decay relationship altogether and showed little provincialism. Interestingly, those biogeographical patterns were consistently found for bacteria from three different size fractions of the plankton with different taxonomic composition, indicating conserved underlying mechanisms. Analysis of the chloroplast 16S rRNA gene sequences revealed that phytoplankton composition was strongly correlated with both free-living and particle associated bacterial community composition (R between 0.51 and 0.62, p < 0.002). The data show that biogeographical patterns commonly found in macroecology do not hold for marine bacterioplankton, most likely because dispersal and evolution occur at drastically different rates in bacteria.
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Affiliation(s)
- Mathias Milici
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Jürgen Tomasch
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Melissa L Wos-Oxley
- Group Microbial Interactions and Processes, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Johan Decelle
- UMR 7144 - Sorbonne Universités, UPMC Univ Paris 06, Station Biologique de RoscoffRoscoff, France; Centre National de la Recherche Scientifique, UMR 7144, Station Biologique de RoscoffRoscoff, France
| | - Ruy Jáuregui
- Group Microbial Interactions and Processes, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Hui Wang
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Zhi-Luo Deng
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Iris Plumeier
- Group Microbial Interactions and Processes, Helmholtz-Center for Infection Research Braunschweig, Germany
| | - Helge-Ansgar Giebel
- Department of Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Thomas H Badewien
- Department of Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Mascha Wurst
- Department of Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Dietmar H Pieper
- Department of Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Meinhard Simon
- Department of Biology of Geological Processes, Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg Oldenburg, Germany
| | - Irene Wagner-Döbler
- Group Microbial Communication, Helmholtz-Center for Infection Research Braunschweig, Germany
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