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Dotsenko VV, Bespalov AV, Sinotsko AE, Temerdashev AZ, Vasilin VK, Varzieva EA, Strelkov VD, Aksenov NA, Aksenova IV. 6-Amino-4-aryl-7-phenyl-3-(phenylimino)-4,7-dihydro-3H-[1,2]dithiolo[3,4-b]pyridine-5-carboxamides: Synthesis, Biological Activity, Quantum Chemical Studies and In Silico Docking Studies. Int J Mol Sci 2024; 25:769. [PMID: 38255843 PMCID: PMC10815501 DOI: 10.3390/ijms25020769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Revised: 12/31/2023] [Accepted: 01/05/2024] [Indexed: 01/24/2024] Open
Abstract
New [1,2]dithiolo[3,4-b]pyridine-5-carboxamides were synthesized through the reaction of dithiomalondianilide (N,N'-diphenyldithiomalondiamide) with 3-aryl-2-cyanoacrylamides or via a three-component reaction involving aromatic aldehydes, cyanoacetamide and dithiomalondianilide in the presence of morpholine. The structure of 6-amino-4-(2,4-dichloro- phenyl)-7-phenyl-3-(phenylimino)-4,7-dihydro-3H-[1,2]dithiolo[3,4-b]pyridine-5-carboxamide was confirmed using X-ray crystallography. To understand the reaction mechanism in detail, density functional theory (DFT) calculations were performed with a Grimme B97-3c composite computational scheme. The results revealed that the rate-limiting step is a cyclization process leading to the closure of the 1,4-dihydropyridine ring, with an activation barrier of 28.8 kcal/mol. Some of the dithiolo[3,4-b]pyridines exhibited moderate herbicide safening effects against 2,4-D. Additionally, ADMET (Absorption, Distribution, Metabolism, Excretion, Toxicity) parameters were calculated and molecular docking studies were performed to identify potential protein targets.
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Affiliation(s)
- Victor V. Dotsenko
- Department of Organic Chemistry and Technologies, Kuban State University, 149 Stavropolskaya St., 350040 Krasnodar, Russia; (A.V.B.); (E.A.V.)
- Department of Chemistry, North Caucasus Federal University, 1a Pushkin St., 355017 Stavropol, Russia; (N.A.A.); (I.V.A.)
| | - Alexander V. Bespalov
- Department of Organic Chemistry and Technologies, Kuban State University, 149 Stavropolskaya St., 350040 Krasnodar, Russia; (A.V.B.); (E.A.V.)
| | - Anna E. Sinotsko
- Department of Organic Chemistry and Technologies, Kuban State University, 149 Stavropolskaya St., 350040 Krasnodar, Russia; (A.V.B.); (E.A.V.)
| | - Azamat Z. Temerdashev
- Department of Analytical Chemistry, Kuban State University, 149 Stavropolskaya St., 350040 Krasnodar, Russia;
| | - Vladimir K. Vasilin
- Department of Bioorganic Chemistry, Kuban State Technological University, 2 Moskovskaya St., 350072 Krasnodar, Russia
| | - Ekaterina A. Varzieva
- Department of Organic Chemistry and Technologies, Kuban State University, 149 Stavropolskaya St., 350040 Krasnodar, Russia; (A.V.B.); (E.A.V.)
| | - Vladimir D. Strelkov
- Department of Organic Chemistry and Technologies, Kuban State University, 149 Stavropolskaya St., 350040 Krasnodar, Russia; (A.V.B.); (E.A.V.)
| | - Nicolai A. Aksenov
- Department of Chemistry, North Caucasus Federal University, 1a Pushkin St., 355017 Stavropol, Russia; (N.A.A.); (I.V.A.)
| | - Inna V. Aksenova
- Department of Chemistry, North Caucasus Federal University, 1a Pushkin St., 355017 Stavropol, Russia; (N.A.A.); (I.V.A.)
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Stroganova TA, Vasilin VK, Kanishcheva EA, Dmitrieva IG, Taranenko VV, Tumskiy RS, Tumskaia AV, Aksenov NA, Krapivin GD. Design, Synthesis, and Screening of Pyridothieno[3,2-b]indole and Pyridothieno[3,2-c]cinnoline Derivatives as Potential Biologically Active Molecules. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/a-1785-7191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
AbstractNew pyridothieno[3,2-b]indole and pyridothieno[3,2-c]cinnoline derivatives are designed and prepared from the corresponding 3-amino-2-arylthieno[2,3-b]pyridines. By a molecular docking method novel potential inhibitors of DNA gyrase B are identified among the thieno[2,3-b]pyridine derivatives. In addition, some of the prepared pyridothienoindoles exhibit in vivo antidote activity against the herbicide 2,4-D.
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Affiliation(s)
- Tatyana A. Stroganova
- Department of Bioorganic Chemistry and Technical Microbiology, Kuban State Technological University
| | - Vladimir K. Vasilin
- Department of Bioorganic Chemistry and Technical Microbiology, Kuban State Technological University
| | - Eugeniya A. Kanishcheva
- Research Institute of Heterocyclic Compounds Chemistry, Kuban State Technological University
| | | | | | - Roman S. Tumskiy
- Institute of Biochemistry and Physiology of Plants and Microorganisms (IBPPM RAS), Russian Academy of Sciences
| | | | | | - Gennady D. Krapivin
- Research Institute of Heterocyclic Compounds Chemistry, Kuban State Technological University
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Stroganova T, Vasilin VK, Dotsenko VV, Aksenov NA, Morozov PG, Vassiliev PM, Volynkin VA, Krapivin GD. Unusual Oxidative Dimerization in the 3-Aminothieno[2,3- b]pyridine-2-carboxamide Series. ACS Omega 2021; 6:14030-14048. [PMID: 34124427 PMCID: PMC8190813 DOI: 10.1021/acsomega.1c00341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Accepted: 05/18/2021] [Indexed: 06/12/2023]
Abstract
Noncatalyzed, regio- and stereoselective hypochlorite oxidation of 3-aminothieno[2,3-b]pyridine-2-carboxamides is presented. Unexpectedly, the oxidation proceeded by different mechanistic pathways, and different products were formed, depending on the nature of solvents used. A possible mechanism, the structure of products, kinetics and dynamics of intramolecular processes, and biological activity of products are discussed.
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Affiliation(s)
- Tatyana
A. Stroganova
- Department
of Bioorganic Chemistry, Kuban State Technological
University, Krasnodar 350072, Russian Federation
| | - Vladimir K. Vasilin
- Department
of Bioorganic Chemistry, Kuban State Technological
University, Krasnodar 350072, Russian Federation
| | - Victor V. Dotsenko
- Department
of Organic Chemistry and Technologies, Kuban
State University, Krasnodar 350040, Russian Federation
- Department
of Organic Chemistry, North Caucasus Federal
University, Stavropol 355009, Russian Federation
| | - Nicolai A. Aksenov
- Department
of Organic Chemistry, North Caucasus Federal
University, Stavropol 355009, Russian Federation
| | - Pavel G. Morozov
- Department
of Chemistry of Natural Compounds, Southern
Federal University, Rostov-on-Don 344006, Russian Federation
| | - Pavel M. Vassiliev
- Volgograd
State Medical University, Volgograd 400131, Russian Federation
| | - Vitaly A. Volynkin
- Department
of Inorganic Chemistry, Kuban State University, Krasnodar 350040, Russian Federation
| | - Gennady D. Krapivin
- Scientific
Research Institute of Chemistry of Heterocyclic Compounds, Kuban State Technological University, Krasnodar 350072, Russian Federation
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Kanishcheva EА, Bedareva VO, Vasilin VK, Stroganova TА, Krapivin GD. Thermolysis of 3-azido-4-aryl(hetaryl)thieno[2,3-b]pyridines: 2,7-naphthyridines or 1,4-diazepines? Chem Heterocycl Compd (N Y) 2019. [DOI: 10.1007/s10593-019-02552-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Stroganova TA, Vasilin VK, Dotsenko VV, Aksenov NA, Krapivin GD. Reaction of thieno[2,3-b]pyridines with sodium hypochlorite: An unusual and stereoselective one-pot approach to dimeric pyrrolo[2′,3′:4,5]thieno[2,3-b]pyridines. Tetrahedron Lett 2019. [DOI: 10.1016/j.tetlet.2019.03.012] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Stroganova TA, Vasilin VK, Kovalenko GA, Krapivin GD. Synthesis of β-Lactam-containing Pyrido[3′,2′:4,5]thieno[3,2- e][1,4]diazepines. J Heterocycl Chem 2017. [DOI: 10.1002/jhet.2936] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Tatyana A. Stroganova
- Kuban State Technological University; Moskovskaya st. 2 Krasnodar 350072 Russian Federation
| | - Vladimir K. Vasilin
- Kuban State Technological University; Moskovskaya st. 2 Krasnodar 350072 Russian Federation
| | - Georgy A. Kovalenko
- Kuban State Technological University; Moskovskaya st. 2 Krasnodar 350072 Russian Federation
| | - Gennady D. Krapivin
- Kuban State Technological University; Moskovskaya st. 2 Krasnodar 350072 Russian Federation
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Stroganova TA, Vasilin VK, Shestakova PS, Red'kin VM, Krapivin GD. Novel Rearrangement of 3-Acylaminofuro[2,3-b]pyridines into 3-(oxazol-4-yl)pyridin-2-ones. J Heterocycl Chem 2014. [DOI: 10.1002/jhet.2032] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Tatyana A. Stroganova
- Kuban State Technological University; Moskovskaya Street 2 Krasnodar 350072 Russian Federation
| | - Vladimir K. Vasilin
- Kuban State Technological University; Moskovskaya Street 2 Krasnodar 350072 Russian Federation
| | - Polina S. Shestakova
- Kuban State Technological University; Moskovskaya Street 2 Krasnodar 350072 Russian Federation
| | - Viktor M. Red'kin
- Kuban State Technological University; Moskovskaya Street 2 Krasnodar 350072 Russian Federation
| | - Gennady D. Krapivin
- Kuban State Technological University; Moskovskaya Street 2 Krasnodar 350072 Russian Federation
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Affiliation(s)
- Tatyana A. Stroganova
- Kuban State Technological University; Moskovskaya Street 2; Krasnodar; 350072; Russian Federation
| | - Viktor M. Red'kin
- Kuban State Technological University; Moskovskaya Street 2; Krasnodar; 350072; Russian Federation
| | - Vladimir K. Vasilin
- Kuban State Technological University; Moskovskaya Street 2; Krasnodar; 350072; Russian Federation
| | - Gennady D. Krapivin
- Kuban State Technological University; Moskovskaya Street 2; Krasnodar; 350072; Russian Federation
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Kosulina DY, Vasilin VK, Stroganova TA, Kaklyugina TY, Krapivin GD. Furan ring recyclization in 2-furfurylthieno[2,3- b]pyridines: An intramolecular N-alkylation of pyrrole ring under acid conditions. J Heterocycl Chem 2010. [DOI: 10.1002/jhet.311] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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