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1
Zhang L, Sasaki-Sekimoto Y, Kosetsu K, Aoyama T, Murata T, Kabeya Y, Sato Y, Koshimizu S, Shimojima M, Ohta H, Hasebe M, Ishikawa M. An ABCB transporter regulates anisotropic cell expansion via cuticle deposition in the moss Physcomitrium patens. New Phytol 2024;241:665-675. [PMID: 37865886 DOI: 10.1111/nph.19337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Accepted: 09/29/2023] [Indexed: 10/23/2023]
2
Gu N, Chen C, Kabeya Y, Hasebe M, Tamada Y. Topoisomerase 1α is required for synchronous spermatogenesis in Physcomitrium patens. New Phytol 2022;234:137-148. [PMID: 35067949 DOI: 10.1111/nph.17983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Accepted: 01/03/2022] [Indexed: 06/14/2023]
3
Higuchi S, Kabeya Y, Nishina Y, Miura Y, Yoshino H. Feasibility and safety of non-contrast percutaneous coronary intervention in patients with complicated acute coronary syndrome. Eur Heart J 2020. [DOI: 10.1093/ehjci/ehaa946.1751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
4
Kabeya Y, Okubo M, Yonezawa S, Nakano H, Inoue M, Ogasawara M, Saito Y, Tanboon J, Indrawati L, Kumutpongpanich T, Chen Y, Tokumasu R, Iwamori T, Takano A, Nishino I. OMICs AND AI APPROACHES FOR MUSCLE DISEASES. Neuromuscul Disord 2020. [DOI: 10.1016/j.nmd.2020.08.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
5
Gu N, Tamada Y, Imai A, Palfalvi G, Kabeya Y, Shigenobu S, Ishikawa M, Angelis KJ, Chen C, Hasebe M. DNA damage triggers reprogramming of differentiated cells into stem cells in Physcomitrella. Nat Plants 2020;6:1098-1105. [PMID: 32807952 DOI: 10.1038/s41477-020-0745-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2019] [Accepted: 07/16/2020] [Indexed: 05/14/2023]
6
Kabeya Y, Iwamori T, Yonezawa S, Takeuchi Y, Nakano H, Nagisa Y, Okubo M, Inoue M, Tokumasu R, Ozawa I, Takano A, Nishino I. O.37AI-based muscle histopathologist can differentiate major muscular dystrophies better than human. Neuromuscul Disord 2019. [DOI: 10.1016/j.nmd.2019.06.320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
7
Ishikawa M, Morishita M, Higuchi Y, Ichikawa S, Ishikawa T, Nishiyama T, Kabeya Y, Hiwatashi Y, Kurata T, Kubo M, Shigenobu S, Tamada Y, Sato Y, Hasebe M. Physcomitrella STEMIN transcription factor induces stem cell formation with epigenetic reprogramming. Nat Plants 2019;5:681-690. [PMID: 31285563 DOI: 10.1038/s41477-019-0464-2] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2018] [Accepted: 05/28/2019] [Indexed: 05/18/2023]
8
Kabeya Y, Takeuchi Y, Nakano H, Okubo M, Inoue M, Tokumasu R, Ozawa I, Takano A, Iwamori T, Yonezawa S, Nishino I. NEXT GENERATION SEQUENCING AND EXPERIMENTAL MYOLOGY. Neuromuscul Disord 2018. [DOI: 10.1016/j.nmd.2018.06.432] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
9
Koshimizu S, Kofuji R, Sasaki-Sekimoto Y, Kikkawa M, Shimojima M, Ohta H, Shigenobu S, Kabeya Y, Hiwatashi Y, Tamada Y, Murata T, Hasebe M. Physcomitrella MADS-box genes regulate water supply and sperm movement for fertilization. Nat Plants 2018;4:36-45. [PMID: 29296005 DOI: 10.1038/s41477-017-0082-9] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2017] [Accepted: 11/24/2017] [Indexed: 05/05/2023]
10
Li C, Sako Y, Imai A, Nishiyama T, Thompson K, Kubo M, Hiwatashi Y, Kabeya Y, Karlson D, Wu SH, Ishikawa M, Murata T, Benfey PN, Sato Y, Tamada Y, Hasebe M. A Lin28 homologue reprograms differentiated cells to stem cells in the moss Physcomitrella patens. Nat Commun 2017;8:14242. [PMID: 28128346 PMCID: PMC5290140 DOI: 10.1038/ncomms14242] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 12/12/2016] [Indexed: 12/21/2022]  Open
11
Oikawa Y, Katsuki T, Kawasaki M, Hashiguchi A, Mukai K, Handa K, Tomita M, Kabeya Y, Asai Y, Iwase K, Hirose S, Koyama K, Atsumi Y, Shimada A. Insulinoma may mask the existence of Type 1 diabetes. Diabet Med 2012;29:e138-41. [PMID: 22356209 DOI: 10.1111/j.1464-5491.2012.03615.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
12
Miyagishima SY, Suzuki K, Okazaki K, Kabeya Y. Expression of the Nucleus-Encoded Chloroplast Division Genes and Proteins Regulated by the Algal Cell Cycle. Mol Biol Evol 2012;29:2957-70. [DOI: 10.1093/molbev/mss102] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
13
Kabeya Y, Noda NN, Fujioka Y, Suzuki K, Inagaki F, Ohsumi Y. Characterization of the Atg17-Atg29-Atg31 complex specifically required for starvation-induced autophagy in Saccharomyces cerevisiae. Biochem Biophys Res Commun 2009;389:612-5. [PMID: 19755117 DOI: 10.1016/j.bbrc.2009.09.034] [Citation(s) in RCA: 86] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2009] [Accepted: 09/08/2009] [Indexed: 11/16/2022]
14
Kawamata T, Kamada Y, Kabeya Y, Sekito T, Ohsumi Y. Organization of the pre-autophagosomal structure responsible for autophagosome formation. Mol Biol Cell 2008;19:2039-50. [PMID: 18287526 DOI: 10.1091/mbc.e07-10-1048] [Citation(s) in RCA: 197] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
15
Kabeya Y, Kawamata T, Suzuki K, Ohsumi Y. Cis1/Atg31 is required for autophagosome formation in Saccharomyces cerevisiae. Biochem Biophys Res Commun 2007;356:405-10. [PMID: 17362880 DOI: 10.1016/j.bbrc.2007.02.150] [Citation(s) in RCA: 73] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2007] [Accepted: 02/27/2007] [Indexed: 11/21/2022]
16
Towns R, Kabeya Y, Yoshimori T, Guo C, Shangguan Y, Hong S, Kaplan M, Klionsky DJ, Wiley JW. Sera from patients with type 2 diabetes and neuropathy induce autophagy and colocalization with mitochondria in SY5Y cells. Autophagy 2005;1:163-70. [PMID: 16874076 DOI: 10.4161/auto.1.3.2068] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
17
Kabeya Y, Kamada Y, Baba M, Takikawa H, Sasaki M, Ohsumi Y. Atg17 functions in cooperation with Atg1 and Atg13 in yeast autophagy. Mol Biol Cell 2005;16:2544-53. [PMID: 15743910 PMCID: PMC1087256 DOI: 10.1091/mbc.e04-08-0669] [Citation(s) in RCA: 260] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
18
Kabeya Y, Mizushima N, Yamamoto A, Oshitani-Okamoto S, Ohsumi Y, Yoshimori T. LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation. J Cell Sci 2005;117:2805-12. [PMID: 15169837 DOI: 10.1242/jcs.01131] [Citation(s) in RCA: 1076] [Impact Index Per Article: 56.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]  Open
19
Saeki K, Hong Z, Nakatsu M, Yoshimori T, Kabeya Y, Yamamoto A, Kaburagi Y, Yuo A. Insulin-dependent signaling regulates azurophil granule-selective macroautophagy in human myeloblastic cells. J Leukoc Biol 2003;74:1108-16. [PMID: 12960228 DOI: 10.1189/jlb.0503211] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]  Open
20
Ohashi M, Mizushima N, Kabeya Y, Yoshimori T. Localization of mammalian NAD(P)H steroid dehydrogenase-like protein on lipid droplets. J Biol Chem 2003;278:36819-29. [PMID: 12837764 DOI: 10.1074/jbc.m301408200] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
21
Nara A, Mizushima N, Yamamoto A, Kabeya Y, Ohsumi Y, Yoshimori T. SKD1 AAA ATPase-dependent endosomal transport is involved in autolysosome formation. Cell Struct Funct 2002;27:29-37. [PMID: 11937716 DOI: 10.1247/csf.27.29] [Citation(s) in RCA: 115] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
22
Kihara A, Kabeya Y, Ohsumi Y, Yoshimori T. Beclin-phosphatidylinositol 3-kinase complex functions at the trans-Golgi network. EMBO Rep 2001;2:330-5. [PMID: 11306555 PMCID: PMC1083858 DOI: 10.1093/embo-reports/kve061] [Citation(s) in RCA: 672] [Impact Index Per Article: 29.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2000] [Revised: 01/26/2001] [Accepted: 02/01/2001] [Indexed: 12/24/2022]  Open
23
Mizushima N, Yamamoto A, Hatano M, Kobayashi Y, Kabeya Y, Suzuki K, Tokuhisa T, Ohsumi Y, Yoshimori T. Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells. J Cell Biol 2001;152:657-68. [PMID: 11266458 PMCID: PMC2195787 DOI: 10.1083/jcb.152.4.657] [Citation(s) in RCA: 1103] [Impact Index Per Article: 48.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
24
Kabeya Y, Mizushima N, Ueno T, Yamamoto A, Kirisako T, Noda T, Kominami E, Ohsumi Y, Yoshimori T. LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing. EMBO J 2000;19:5720-8. [PMID: 11060023 PMCID: PMC305793 DOI: 10.1093/emboj/19.21.5720] [Citation(s) in RCA: 5314] [Impact Index Per Article: 221.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
25
Kirisako T, Ichimura Y, Okada H, Kabeya Y, Mizushima N, Yoshimori T, Ohsumi M, Takao T, Noda T, Ohsumi Y. The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway. J Cell Biol 2000;151:263-76. [PMID: 11038174 PMCID: PMC2192639 DOI: 10.1083/jcb.151.2.263] [Citation(s) in RCA: 736] [Impact Index Per Article: 30.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
26
Nakayama S, Klugbauer N, Kabeya Y, Smith LM, Hofmann F, Kuzuya M. The alpha 1-subunit of smooth muscle Ca(2+) channel preserves multiple open states induced by depolarization. J Physiol 2000;526 Pt 1:47-56. [PMID: 10878098 PMCID: PMC2270004 DOI: 10.1111/j.1469-7793.2000.00047.x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]  Open
27
Yoshimori T, Yamagata F, Yamamoto A, Mizushima N, Kabeya Y, Nara A, Miwako I, Ohashi M, Ohsumi M, Ohsumi Y. The mouse SKD1, a homologue of yeast Vps4p, is required for normal endosomal trafficking and morphology in mammalian cells. Mol Biol Cell 2000;11:747-63. [PMID: 10679028 PMCID: PMC14807 DOI: 10.1091/mbc.11.2.747] [Citation(s) in RCA: 166] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
28
Nakamura K, Shozui M, Ban E, Kabeya Y, Shibata Y. [Nursing approach to the ARF patient after heart surgery]. Kango Gijutsu 1983;29:1047-56. [PMID: 6556314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 04/05/2023]
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