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Acri DJ, You Y, Tate MD, Karahan H, Martinez P, McCord B, Sharify AD, John S, Kim B, Dabin LC, Philtjens S, Wijeratne HS, McCray TJ, Smith DC, Bissel SJ, Lamb BT, Lasagna-Reeves CA, Kim J. Network analysis identifies strain-dependent response to tau and tau seeding-associated genes. J Exp Med 2023; 220:e20230180. [PMID: 37606887 PMCID: PMC10443211 DOI: 10.1084/jem.20230180] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2023] [Revised: 06/05/2023] [Accepted: 07/27/2023] [Indexed: 08/23/2023] Open
Abstract
Previous research demonstrated that genetic heterogeneity is a critical factor in modeling amyloid accumulation and other Alzheimer's disease phenotypes. However, it is unknown what mechanisms underlie these effects of genetic background on modeling tau aggregate-driven pathogenicity. In this study, we induced tau aggregation in wild-derived mice by expressing MAPT. To investigate the effect of genetic background on the action of tau aggregates, we performed RNA sequencing with brains of C57BL/6J, CAST/EiJ, PWK/PhJ, and WSB/EiJ mice (n = 64) and determined core transcriptional signature conserved in all genetic backgrounds and signature unique to wild-derived backgrounds. By measuring tau seeding activity using the cortex, we identified 19 key genes associated with tau seeding and amyloid response. Interestingly, microglial pathways were strongly associated with tau seeding activity in CAST/EiJ and PWK/PhJ backgrounds. Collectively, our study demonstrates that mouse genetic context affects tau-mediated alteration of transcriptome and tau seeding. The gene modules associated with tau seeding provide an important resource to better model tauopathy.
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Affiliation(s)
- Dominic J. Acri
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Medical Neuroscience Graduate Program, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Yanwen You
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Anatomy, Cell Biology and Physiology, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Mason D. Tate
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Medical Neuroscience Graduate Program, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Hande Karahan
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Pablo Martinez
- Department of Anatomy, Cell Biology and Physiology, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Brianne McCord
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - A. Daniel Sharify
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Sutha John
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Byungwook Kim
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Luke C. Dabin
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Stéphanie Philtjens
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - H.R. Sagara Wijeratne
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Biochemistry and Molecular Biology, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Tyler J. McCray
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Medical Neuroscience Graduate Program, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Daniel C. Smith
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Medical Neuroscience Graduate Program, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Stephanie J. Bissel
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Bruce T. Lamb
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Cristian A. Lasagna-Reeves
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Anatomy, Cell Biology and Physiology, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Center for Computational Biology and Bioinformatics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
| | - Jungsu Kim
- Stark Neurosciences Research Institute, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
- Department of Medical and Molecular Genetics, Indiana UniversitySchool of Medicine, Indianapolis, IN, USA
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