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Wei H, Liu J, Liu M, Zhang H, Chen Y. Rumen fermentation and microbial diversity of sheep fed a high-concentrate diet supplemented with hydroethanolic extract of walnut green husks. Anim Biosci 2024; 37:655-667. [PMID: 37946420 PMCID: PMC10915217 DOI: 10.5713/ab.23.0213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2023] [Revised: 08/16/2023] [Accepted: 10/20/2023] [Indexed: 11/12/2023] Open
Abstract
OBJECTIVE This study aimed to assess the impact of a hydroethanolic extract of walnut green husks (WGH) on rumen fermentation and the diversity of bacteria, methanogenic archaea, and fungi in sheep fed a high-concentrate diet. METHODS Five healthy small-tailed Han ewes with permanent rumen fistula were selected and housed in individual pens. This study adopted a self-controlled and crossover design with a control period and an experimental period. During the control period, the animals were fed a basal diet (with a ratio of concentrate to roughage of 65:35), while during the treatment period, the animals were fed the basal diet supplemented with 0.5% hydroethanolic extract of WGH. Fermentation parameters, digestive enzyme activities, and microbial diversity in rumen fluid were analyzed. RESULTS Supplementation of hydroethanolic extract of WGH had no significant effect on feed intake, concentrations of total volatile fatty acids, isovalerate, ammonia nitrogen, and microbial protein (p>0.05). However, the ruminal pH, concentrations of acetate, butyrate and isobutyrate, the ratio of acetate to propionate, protozoa count, and the activities of filter paper cellulase and cellobiase were significantly increased (p<0.05), while concentrations of propionate and valerate were significantly decreased (p<0.05). Moreover, 16S rRNA gene sequencing revealed that the relative abundance of rumen bacteria Christensenellaceae R7 group, Saccharofermentans, and Ruminococcaceae NK4A214 group were significantly increased, while Ruminococcus gauvreauii group, Prevotella 7 were significantly decreased (p<0.05). The relative abundance of the fungus Pseudomonas significantly increased, while Basidiomycota, Fusarium, and Alternaria significantly decreased (p<0.05). However, there was no significant change in the community structure of methanogenic archaea. CONCLUSION Supplementation of hydroethanolic extract of WGH to a high-concentrate diet improved the ruminal fermentation, altered the structure of ruminal bacterial and fungal communities, and exhibited beneficial effects in alleviating subacute rumen acidosis of sheep.
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Affiliation(s)
- Huan Wei
- Laboratory of Nutrition for Meat & Dairy Herbivore, College of Animal Science, Xinjiang Agricultural University, Urumqi 830052,
China
| | - Jiancheng Liu
- Laboratory of Nutrition for Meat & Dairy Herbivore, College of Animal Science, Xinjiang Agricultural University, Urumqi 830052,
China
| | - Mengjian Liu
- Laboratory of Nutrition for Meat & Dairy Herbivore, College of Animal Science, Xinjiang Agricultural University, Urumqi 830052,
China
| | - Huiling Zhang
- Laboratory of Nutrition for Meat & Dairy Herbivore, College of Animal Science, Xinjiang Agricultural University, Urumqi 830052,
China
| | - Yong Chen
- Laboratory of Nutrition for Meat & Dairy Herbivore, College of Animal Science, Xinjiang Agricultural University, Urumqi 830052,
China
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Linz D, Struewing I, Sienkiewicz N, Steinman AD, Partridge CG, McIntosh K, Allen J, Lu J, Vesper S. Periodic Addition of Glucose Suppressed Cyanobacterial Abundance in Additive Lake Water Samples during the Entire Bloom Season. J Water Resour Prot 2024; 16:140-155. [PMID: 38487714 PMCID: PMC10936582 DOI: 10.4236/jwarp.2024.162009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/17/2024]
Abstract
Previously, we showed that prophylactic addition of glucose to Harsha Lake water samples could inhibit cyanobacteria growth, at least for a short period of time. The current study tested cyanobacterial control with glucose for the entire Harsha Lake bloom season. Water samples (1000 ml) were collected weekly from Harsha Lake during the algal-bloom season starting June 9 and lasting until August 24, 2022. To each of two 7-liter polypropylene containers, 500 ml of Harsha Lake water was added, and the containers were placed in a controlled environment chamber. To one container labeled "Treated," 0.15 g of glucose was added, and nothing was added to the container labeled "Control." After that, three 25 ml samples from each container were collected and used for 16S rRNA gene sequencing each week. Then 1000 ml of Harsha Lake water was newly collected each week, with 500 ml added to each container, along with the addition of 0.15 g glucose to the "Treated" container. Sequencing data were used to examine differences in the composition of bacterial communities between Treated and Control containers. Treatment with glucose altered the microbial communities by 1) reducing taxonomic diversity, 2) largely eliminating cyanobacterial taxa, and 3) increasing the relative abundance of subsets of non-cyanobacterial taxa (such as Proteobacteria and Actinobacteriota). These effects were observed across time despite weekly inputs derived directly from Lake water. The addition of glucose to a container receiving weekly additions of Lake water suppressed the cyanobacterial populations during the entire summer bloom season. The glucose appears to stimulate the diversity of certain bacterial taxa at the expense of the cyanobacteria.
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Affiliation(s)
- David Linz
- United States Environmental Protection Agency, Cincinnati, Ohio, USA
| | - Ian Struewing
- United States Environmental Protection Agency, Cincinnati, Ohio, USA
| | | | - Alan David Steinman
- Annis Water Resources Institute, Grand Valley State University, Muskegon, USA
| | | | - Kyle McIntosh
- Oak Ridge Institute for Science and Education, Oak Ridge, Tennessee, USA
| | - Joel Allen
- United States Environmental Protection Agency, Cincinnati, Ohio, USA
| | - Jingrang Lu
- United States Environmental Protection Agency, Cincinnati, Ohio, USA
| | - Stephen Vesper
- United States Environmental Protection Agency, Cincinnati, Ohio, USA
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Zhao G, Wu H, Li Y, Li L, He J, Yang X, Xie X. Fermentation characteristics and microbial community composition of wet brewer's grains and corn stover mixed silage prepared with cellulase and lactic acid bacteria supplementation. Anim Biosci 2024; 37:84-94. [PMID: 37592379 PMCID: PMC10766456 DOI: 10.5713/ab.23.0177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Revised: 05/31/2023] [Accepted: 06/26/2023] [Indexed: 08/19/2023] Open
Abstract
OBJECTIVE The objective of this study was to investigate how cellulase or/and lactic acid bacteria (LAB) affected the fermentation characteristic and microbial community in wet brewer's grains (WBG) and corn stover (CS) mixed silage. METHODS The WBG was mixed thoroughly with the CS at 7:3 (w/w). Four treatment groups were studied: i) CON, no additives; ii) CEL, added cellulase (120 U/g fresh matter [FM]), iii) LAB, added LAB (2×106 cfu/g FM), and iv) CLA, added cellulase (120 U/g FM) and LAB (2×106 cfu/g FM). RESULTS All additive-treated groups showed higher fermentation quality over the 30 d ensiling period. As these groups exhibited higher (p<0.05) LAB counts and lactic acid (LA) content, along with lower pH value and ammonia-nitrogen (NH3-N) content than the control. Specifically, cellulase-treated groups (CEL and CLA) showed lower (p<0.05) neutral detergent fiber and acid detergent fiber contents than other groups. All additives increased the abundance of beneficial bacteria (Firmicutes, Lactiplantibacillus, and Limosilactobacillus) while they decreased abundance of Proteobacteria and microbial diversity as well. CONCLUSION The combined application of cellulase and LAB could effectively improve the fermentation quality and microbial community of the WBG and CS mixed silage.
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Affiliation(s)
- Guoqiang Zhao
- Guangdong VTR Bio-Tech Co., Ltd., Zhuhai, 519060,
China
| | - Hao Wu
- State Key Laboratory of Animal Nutrition, College of Animal Science and Technology, China Agricultural University, Beijing, 100193,
China
| | - Yangyuan Li
- Guangdong VTR Bio-Tech Co., Ltd., Zhuhai, 519060,
China
| | - Li Li
- Guangdong VTR Bio-Tech Co., Ltd., Zhuhai, 519060,
China
| | - Jiajun He
- Guangdong VTR Bio-Tech Co., Ltd., Zhuhai, 519060,
China
| | - Xinjian Yang
- Guangdong VTR Bio-Tech Co., Ltd., Zhuhai, 519060,
China
| | - Xiangxue Xie
- Guangdong VTR Bio-Tech Co., Ltd., Zhuhai, 519060,
China
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Bicelli LG, Giordani A, Augusto MR, Okada DY, Moura RBD, Vich DV, Contrera RC, Cano V, Souza TSOD. Microbial interactions and nitrogen removal performance in an intermittently rotating biological contactor treating mature landfill leachate. Bioresour Technol 2023; 389:129797. [PMID: 37769977 DOI: 10.1016/j.biortech.2023.129797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Revised: 09/18/2023] [Accepted: 09/21/2023] [Indexed: 10/03/2023]
Abstract
Developing efficient landfill leachate treatment is still necessary to reduce environmental risks. However, nitrogen removal in biological treatment systems is often poor or costly. Studying biofilms in anoxic/aerobic zones of rotating biological contactors (RBC) can elucidate how microbial interactions confer resistance to shock loads and toxic substances in leachate treatment. This study assessed the nitritation-anammox performance in an intermittent-rotating bench-scale RBC treating mature leachate (diluted). Despite the leachate toxicity, the system achieved nitritation with an efficiency of up to 34 % under DO values between 0.8 and 1.8 mg.L-1. The highest average ammoniacal nitrogen removal was 45.3 % with 10 h of HRT. The 16S rRNA sequencing confirmed the presence of Nitrosonomas, Aquamicrobium, Gemmata, and Plantomyces. The coexistence of these bacteria corroborated the selective pressure exerted by leachate in the community structure. The microbial interactions found here highlight the potential application of RBC to remove nitrogen in landfill leachate treatment.
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Affiliation(s)
- Larissa Garcez Bicelli
- Department of Hydraulic and Environmental Engineering, Polytechnic School, University of São Paulo (USP), Av. Prof. Almeida Prado, 83, Travessa 2, Butantã, 05.508-900, São Paulo, SP, Brazil.
| | - Alessandra Giordani
- Department of Hydraulic and Environmental Engineering, Polytechnic School, University of São Paulo (USP), Av. Prof. Almeida Prado, 83, Travessa 2, Butantã, 05.508-900, São Paulo, SP, Brazil; Institute of Science and Technology, Federal University of Alfenas (UNIFAL-MG), Poços de Caldas, Brazil
| | - Matheus Ribeiro Augusto
- Department of Hydraulic and Environmental Engineering, Polytechnic School, University of São Paulo (USP), Av. Prof. Almeida Prado, 83, Travessa 2, Butantã, 05.508-900, São Paulo, SP, Brazil
| | | | - Rafael Brito de Moura
- Institute of Science and Technology, Federal University of Alfenas (UNIFAL-MG), Poços de Caldas, Brazil
| | | | - Ronan Cleber Contrera
- Department of Hydraulic and Environmental Engineering, Polytechnic School, University of São Paulo (USP), Av. Prof. Almeida Prado, 83, Travessa 2, Butantã, 05.508-900, São Paulo, SP, Brazil
| | - Vitor Cano
- Department of Hydraulic and Environmental Engineering, Polytechnic School, University of São Paulo (USP), Av. Prof. Almeida Prado, 83, Travessa 2, Butantã, 05.508-900, São Paulo, SP, Brazil
| | - Theo Syrto Octavio de Souza
- Department of Hydraulic and Environmental Engineering, Polytechnic School, University of São Paulo (USP), Av. Prof. Almeida Prado, 83, Travessa 2, Butantã, 05.508-900, São Paulo, SP, Brazil
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Falk N, Droppo IG, Drouillard KG, Weisener CG. Biogeochemical Processes and Microbial Dynamics Governing Phosphorus Retention and Release in Sediments: A Case Study in Lower Great Lakes Headwaters. Environ Manage 2023; 72:932-944. [PMID: 37505273 PMCID: PMC10509119 DOI: 10.1007/s00267-023-01859-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Accepted: 07/10/2023] [Indexed: 07/29/2023]
Abstract
The ability of headwater bed and suspended sediments to mitigate non-point agricultural phosphorus (P) loads to the lower Great Lakes is recognized, but the specific biogeochemical processes promoting sediment P retention or internal P release remain poorly understood. To elucidate these mechanisms, three headwater segments located within priority watersheds of Southern Ontario, Canada, were sampled through the growing season of 2018-2020. The study employed equilibrium P assays along with novel assessments of legacy watershed nutrients, nitrogen (N) concentrations, sediment redox, and microbial community composition. 20-year data revealed elevated total P (TP) and total Nitrogen (TN) at an inorganic fertilizer and manure fertilizer-impacted site, respectively. Overall, sampled sites acted as P sinks; however, agricultural sediments exhibited significantly lower buffering capacity compared to a reference forested watershed. Collection of fine suspended sediment (<63 µm) through time-integrated sampling showed the suspended load at the inorganic-fertilized site was saturated with P, indicating a greater potential for P release into surface waters compared to bed sediments. Through vertical microsensor profiling and DNA sequencing of the sediment microbial community, site-specific factors associated with a distinct P-source event were identified. These included rapid depletion of dissolved oxygen (DO) across the sediment water interface (SWI), as well as the presence of nitrate-reducing bacterial and ammonia-oxidizing archaeal (AOA) genera. This research provides valuable insights into the dynamics of P in headwaters, shedding light on P retention and release. Understanding these processes is crucial for effective management strategies aimed at mitigating P pollution to the lower Great Lakes.
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Affiliation(s)
- Nicholas Falk
- Flinders Accelerator for Microbiome Research, College of Science and Engineering, Flinders University, Sturt Rd, Adelaide, SA, 5042, Australia.
- Great Lakes Institute for Environmental Research, University of Windsor, 401 Sunset Avenue, Windsor, ON, N9B 3P4, Canada.
| | - Ian G Droppo
- Canada Centre for Inland Waters, Environment and Climate Change Canada, 867 Lakeshore Rd, Burlington, ON, L7R 4A6, Canada
| | - Ken G Drouillard
- Great Lakes Institute for Environmental Research, University of Windsor, 401 Sunset Avenue, Windsor, ON, N9B 3P4, Canada
| | - Christopher G Weisener
- Great Lakes Institute for Environmental Research, University of Windsor, 401 Sunset Avenue, Windsor, ON, N9B 3P4, Canada
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Wang B, Hu H, Bishop K, Buck M, Björn E, Skyllberg U, Nilsson MB, Bertilsson S, Bravo AG. Microbial communities mediating net methylmercury formation along a trophic gradient in a peatland chronosequence. J Hazard Mater 2023; 442:130057. [PMID: 36179622 DOI: 10.1016/j.jhazmat.2022.130057] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2022] [Revised: 09/05/2022] [Accepted: 09/19/2022] [Indexed: 06/16/2023]
Abstract
Peatlands are generally important sources of methylmercury (MeHg) to adjacent aquatic ecosystems, increasing the risk of human and wildlife exposure to this highly toxic compound. While microorganisms play important roles in mercury (Hg) geochemical cycles where they directly and indirectly affect MeHg formation in peatlands, potential linkages between net MeHg formation and microbial communities involving these microorganisms remain unclear. To address this gap, microbial community composition and specific marker gene transcripts were investigated along a trophic gradient in a geographically constrained peatland chronosequence. Our results showed a clear spatial pattern in microbial community composition along the gradient that was highly driven by peat soil properties and significantly associated with net MeHg formation as approximated by MeHg concentration and %MeHg of total Hg concentration. Known fermentative, syntrophic, methanogenic and iron-reducing metabolic guilds had the strong positive correlations to net MeHg formation, while methanotrophic and methylotrophic microorganisms were negatively correlated. Our results indicated that sulfate reducers did not have a key role in net MeHg formation. Microbial activity as interpreted from 16S rRNA sequences was significantly correlated with MeHg and %MeHg. Our findings shed new light on the role of microbial community in net MeHg formation of peatlands that undergo ontogenetic change.
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Affiliation(s)
- Baolin Wang
- State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, 550081 Guiyang, China; Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden
| | - Haiyan Hu
- State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, 550081 Guiyang, China.
| | - Kevin Bishop
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden
| | - Moritz Buck
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden
| | - Erik Björn
- Department of Chemistry, Umeå University, SE-90187 Umeå, Sweden
| | - Ulf Skyllberg
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, SE-90183 Umeå, Sweden
| | - Mats B Nilsson
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, SE-90183 Umeå, Sweden
| | - Stefan Bertilsson
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, SE-75007 Uppsala, Sweden
| | - Andrea G Bravo
- Department of Marine Biology and Oceanography, Institut de Ciències del Mar (ICM-CSIC), Pg Marítim de la Barceloneta 37-49, E08003 Barcelona, Catalunya, Spain
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Olivera C, Tondo ML, Girardi V, Fattobene L, Herrero MS, Pérez LM, Salvatierra LM. Early-stage response in anaerobic bioreactors due to high sulfate loads: Hydrogen sulfide yield and other organic volatile sulfur compounds as a sign of microbial community modifications. Bioresour Technol 2022; 350:126947. [PMID: 35247564 DOI: 10.1016/j.biortech.2022.126947] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2022] [Revised: 02/28/2022] [Accepted: 03/01/2022] [Indexed: 06/14/2023]
Abstract
In this work, the early-stage response of six lab-scale biogas bioreactors fed with different amounts of a sulfate-rich organic agro-industrial effluent was investigated. Biogas characterization, gas chromatography selective for sulfur compounds and high-throughput sequencing of 16S rRNA gene were performed. Hydrogen sulfide (H2S) yield went from transient to steady state in ∼ 2 weeks for all the studied conditions. In addition, volatile sulfur compounds (VSCs), like methanethiol (MeSH) and dimethyl sulfide (DMS), were generated at high sulfate loads. Changes were evidenced in the microbial community structures, with a higher abundance of genes involved in the dissimilatory sulfate-reduction pathway in high loaded sulfate bioreactors, as determined by PICRUSt analysis. Principal component analysis (PCA) and correlation analyses evidenced strong relationships between H2S, VSCs and the microbial community. Sulfate-reducing bacteria (SRB) like Desulfocarbo, Desulfocella and Desulfobacteraceae might be possibly linked with methylation processes of H2S.
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Affiliation(s)
- Camila Olivera
- Instituto de Investigaciones en Ingeniería Ambiental, Química y Biotecnología Aplicada - INGEBIO-, Facultad de Química e Ingeniería del Rosario, Pontificia Universidad Católica Argentina (UCA), Av. Pellegrini 3314 (S2002QEO), Rosario (Santa Fe), Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina
| | - María Laura Tondo
- Instituto de Investigaciones en Ingeniería Ambiental, Química y Biotecnología Aplicada - INGEBIO-, Facultad de Química e Ingeniería del Rosario, Pontificia Universidad Católica Argentina (UCA), Av. Pellegrini 3314 (S2002QEO), Rosario (Santa Fe), Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina
| | - Valentina Girardi
- Instituto de Investigaciones en Ingeniería Ambiental, Química y Biotecnología Aplicada - INGEBIO-, Facultad de Química e Ingeniería del Rosario, Pontificia Universidad Católica Argentina (UCA), Av. Pellegrini 3314 (S2002QEO), Rosario (Santa Fe), Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina
| | - Lucía Fattobene
- Instituto de Investigaciones en Ingeniería Ambiental, Química y Biotecnología Aplicada - INGEBIO-, Facultad de Química e Ingeniería del Rosario, Pontificia Universidad Católica Argentina (UCA), Av. Pellegrini 3314 (S2002QEO), Rosario (Santa Fe), Argentina
| | - María Sol Herrero
- Instituto de Investigaciones en Ingeniería Ambiental, Química y Biotecnología Aplicada - INGEBIO-, Facultad de Química e Ingeniería del Rosario, Pontificia Universidad Católica Argentina (UCA), Av. Pellegrini 3314 (S2002QEO), Rosario (Santa Fe), Argentina
| | - Leonardo Martín Pérez
- Instituto de Investigaciones en Ingeniería Ambiental, Química y Biotecnología Aplicada - INGEBIO-, Facultad de Química e Ingeniería del Rosario, Pontificia Universidad Católica Argentina (UCA), Av. Pellegrini 3314 (S2002QEO), Rosario (Santa Fe), Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina
| | - Lucas Matías Salvatierra
- Instituto de Investigaciones en Ingeniería Ambiental, Química y Biotecnología Aplicada - INGEBIO-, Facultad de Química e Ingeniería del Rosario, Pontificia Universidad Católica Argentina (UCA), Av. Pellegrini 3314 (S2002QEO), Rosario (Santa Fe), Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina.
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Xie J, Zou X, Chang Y, Chen C, Ma J, Liu H, Cui MH, Zhang TC. Bioelectrochemical systems with a cathode of stainless-steel electrode for treatment of refractory wastewater: Influence of electrode material on system performance and microbial community. Bioresour Technol 2021; 342:125959. [PMID: 34852439 DOI: 10.1016/j.biortech.2021.125959] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2021] [Revised: 09/09/2021] [Accepted: 09/13/2021] [Indexed: 06/13/2023]
Abstract
The large-scale application of the bioelectrochemical system (BES) is limited by the cost-effective electrode materials. In this study, five kinds of stainless-steel materials were used as the cathode of the BES coupled with anaerobic digestion (BES-AD) for the treatment of diluted N, N-dimethylacetamide (DMAC) wastewater. Compared with a carbon-cloth cathode, BES-AD with a stainless-steel cathode had more engineering due to its low cost, although the operating efficiencies were slightly inferior. Stainless-steel mesh with a 100 µm aperture (SSM-100 μm) was the most cost-effective electrode and the implanted BES exhibited better COD removal efficiency, electrochemical performance and biodegradability. Analysis of microbial community revealed the synergetic effect between exoelectrogen and fermentative bacteria had been strengthened in the SSM-100 μm cathode biofilm. Function analysis of the microbial community based on PICRUSt predicted metagenomes revealed that the metabolic pathways of xenobiotics biodegradation and metabolism in the SSM-100 μm cathode were stimulated.
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Affiliation(s)
- Jiawei Xie
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou 215009, PR China
| | - Xinyi Zou
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou 215009, PR China
| | - Yaofeng Chang
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou 215009, PR China
| | - Chongjun Chen
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou 215009, PR China; Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, Suzhou University of Science and Technology, Suzhou 215009, PR China.
| | - Ji Ma
- Jiangsu Sujing Group Co., Ltd, Suzhou 215122, PR China
| | - He Liu
- School of Environment and Civil Engineering, Jiangnan University, Wuxi 214122, PR China
| | - Min-Hua Cui
- School of Environment and Civil Engineering, Jiangnan University, Wuxi 214122, PR China
| | - Tian C Zhang
- Civil & Environmental Engineering Dept, University of Nebraska-Lincoln (Omaha Campus), Omaha, NE 68182-0178, USA
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Huang D, Xu Y, Lei F, Yu X, Ouyang Z, Chen Y, Jia H, Guo X. Degradation of polyethylene plastic in soil and effects on microbial community composition. J Hazard Mater 2021; 416:126173. [PMID: 34492948 DOI: 10.1016/j.jhazmat.2021.126173] [Citation(s) in RCA: 46] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Revised: 05/17/2021] [Accepted: 05/18/2021] [Indexed: 05/20/2023]
Abstract
Plastics pollution in global soil systems is becoming a severely global issue and potential threat to terrestrial ecosystem serves and human health. Herein, in order to determine the degradability and ecological effects of polyethylene (PE) films, we measured the weight loss and characterization of PE films and analyzed variation in microbial community. The results of weight loss, SEM and FTIR spectra exhibited that PE films had unique degradation performance under different conditions. Simultaneously, we investigated the effects of PE films on the microbial community, and the microbiota colonizing on plastics. PE films may change the soil microbial community composition in soil, and hold the post of unique matrix for microbial colonization. These results indicate that the degradation of PE films and microbial community composition in soil can be affected by different conditions (soil layer, time and plants). By assessing the alteration of microbial community composition and PE films in soil, this work will contribute to enhance our understanding on the potential risks of plastics on soil ecosystems and provide a scientific basis for understanding the ecological effect of plastics on soil functions.
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Affiliation(s)
- Daofen Huang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yibo Xu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Fadan Lei
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xiaoqin Yu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Zhuozhi Ouyang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China; Key Laboratory of Plant Nutrition and the Agro-environment in Northwest China, Ministry of Agriculture, Yangling, Shaanxi 712100, China
| | - Yanhua Chen
- Institute of Plant Nutrition and Resources, Beijing Academy of Agricultural and Forestry Sciences, Beijing 100097, China
| | - Hanzhong Jia
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China; Key Laboratory of Plant Nutrition and the Agro-environment in Northwest China, Ministry of Agriculture, Yangling, Shaanxi 712100, China
| | - Xuetao Guo
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, China.
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Li D, Ma X, Yin F, Qiu Y, Yan X. Creating biotransformation of volatile fatty acids and octanoate as co-substrate to high yield medium-chain-length polyhydroxyalkanoate. Bioresour Technol 2021; 331:125031. [PMID: 33798859 DOI: 10.1016/j.biortech.2021.125031] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Revised: 03/16/2021] [Accepted: 03/17/2021] [Indexed: 06/12/2023]
Abstract
Using mixed microbial consortium (MMC) to accumulate polyhydroxyalkanoate (PHA) is an effective strategy to solve high production cost and reduce the amount of excess sludge. In this study, a process for the production of short-chain-length and medium-chain-length PHA using volatile fatty acids (VFAs) from pretreated wood hydrolysate synergistic with octanoate as co-substrate was proposed. The effects of co-substrate ratios on PHA accumulation ability and physical properties were investigated. The incorporation of co-substrate accelerated the time of PHA and 3-hydroxyoctanoate reaching the maximum production (1834 and 280 mg COD/L). The highest PHA content was 53.0% (w/w), which was equivalent to that reported previously. The biopolymer films possessed high tensile strength, Young's modulus, and could be used in the field of water vapor barrier requirements. The accumulation strategy applied for converting fermentation products VFAs and octanoate co-substrate into high value and yield PHA could potentially demonstrate the valuable for low-cost large-scale production.
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Affiliation(s)
- Dongna Li
- College of Light Industry Science and Engineering, Tianjin University of Science & Technology, Tianjin 300222, PR China
| | - Xiaojun Ma
- College of Light Industry Science and Engineering, Tianjin University of Science & Technology, Tianjin 300222, PR China.
| | - Fen Yin
- College of Light Industry Science and Engineering, Tianjin University of Science & Technology, Tianjin 300222, PR China
| | - Yujuan Qiu
- College of Light Industry Science and Engineering, Tianjin University of Science & Technology, Tianjin 300222, PR China
| | - Xu Yan
- College of Light Industry Science and Engineering, Tianjin University of Science & Technology, Tianjin 300222, PR China
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Liu W, Zhang X, Xu H, Li S, Lau HCH, Chen Q, Zhang B, Zhao L, Chen H, Sung JJY, Yu J. Microbial Community Heterogeneity Within Colorectal Neoplasia and its Correlation With Colorectal Carcinogenesis. Gastroenterology 2021; 160:2395-2408. [PMID: 33581124 DOI: 10.1053/j.gastro.2021.02.020] [Citation(s) in RCA: 64] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Revised: 02/02/2021] [Accepted: 02/09/2021] [Indexed: 02/08/2023]
Abstract
BACKGROUND & AIMS Gut microbial dysbiosis has pivotal involvement in colorectal cancer (CRC). However, the intratumoral microbiota and its association with CRC progression remain elusive. We aimed to determine the microbial community architecture within a neoplasia (CRC or adenoma) and its contribution to colorectal carcinogenesis. METHODS We collected 436 tissue biopsies from patients with CRC (n = 36) or adenoma (n = 32) (2-6 biopsies from a neoplasia plus 2-5 biopsies from adjacent normal tissues per individual). Microbial profiling was performed using 16S ribosomal RNA gene sequencing with subsequent investigation of microbiota diversities and heterogeneity. The correlation between microbial dysbiosis and host genetic alterations (KRAS mutation and microsatellite instability) in all neoplasia biopsies was also analyzed. RESULTS We discovered that intra-neoplasia microbial communities are heterogeneous. Abundances of some CRC-associated pathobionts (eg, Fusobacterium, Bacteroides, Parvimonas, and Prevotella) were found to be highly varied within a single neoplasia. Correlation of such heterogeneity with CRC development revealed alterations in microbial communities involving microbes with high intra-neoplasia variation in abundance. Moreover, we found that the intra-neoplasia variation in abundance of individual microbes changed along the adenoma-carcinoma sequence. We further determined that there was a significant difference in intra-neoplasia microbiota between biopsies with and without KRAS mutation (P < .001) or microsatellite instability (P < .001), and illustrated the association of intratumoral microbial heterogeneity with genetic alteration. CONCLUSIONS We demonstrated that intra-neoplasia microbiota is heterogeneous and correlated with colorectal carcinogenesis. Our findings provide new insights on the contribution of gut microbiota heterogeneity to CRC progression.
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Affiliation(s)
- Weixin Liu
- Institute of Digestive Disease, Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong, Shenzhen Research Institute, Sha Tin, New Territories, Hong Kong
| | - Xiang Zhang
- Institute of Digestive Disease, Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong, Shenzhen Research Institute, Sha Tin, New Territories, Hong Kong
| | - Hongzhi Xu
- Institute for Microbial Ecology, School of Medicine, Xiamen University, Department of Gastroenterology, Zhongshan Hospital, Xiamen University, Xiamen, China
| | - Shengmian Li
- Department of Gastroenterology, the Fourth Affiliated Hospital of Hebei Medical University, Shijiazhuang, China
| | - Harry Cheuk-Hay Lau
- Institute of Digestive Disease, Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong, Shenzhen Research Institute, Sha Tin, New Territories, Hong Kong
| | - Qiongyun Chen
- Institute for Microbial Ecology, School of Medicine, Xiamen University, Department of Gastroenterology, Zhongshan Hospital, Xiamen University, Xiamen, China
| | - Bin Zhang
- Department of Gastroenterology, the Fourth Affiliated Hospital of Hebei Medical University, Shijiazhuang, China
| | - Liuyang Zhao
- Institute of Digestive Disease, Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong, Shenzhen Research Institute, Sha Tin, New Territories, Hong Kong
| | - Huarong Chen
- Institute of Digestive Disease, Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong, Shenzhen Research Institute, Sha Tin, New Territories, Hong Kong
| | - Joseph Jao-Yiu Sung
- Institute of Digestive Disease, Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong, Shenzhen Research Institute, Sha Tin, New Territories, Hong Kong
| | - Jun Yu
- Institute of Digestive Disease, Department of Medicine and Therapeutics, State Key Laboratory of Digestive Disease, Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong, Shenzhen Research Institute, Sha Tin, New Territories, Hong Kong.
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Hong H, Li J, Wang Q, Lu H, Liu J, Dong YW, Zhang J, Li J, Williams MA, Huang B, Yan C. The legacy of trace metal deposition from historical anthropogenic river management: A regional driver of offshore sedimentary microbial diversity. J Hazard Mater 2020; 400:123164. [PMID: 32563906 DOI: 10.1016/j.jhazmat.2020.123164] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2020] [Revised: 05/30/2020] [Accepted: 06/07/2020] [Indexed: 06/11/2023]
Abstract
River management, both modern and historical, have dramatically modified offshore environments. While numerous studies have described the modern impacts, very few have evaluated the legacies remaining from hundreds of years ago. Herein, we show trace metal enrichment in the surface sediment of the abandoned Yellow River Delta, hypothesized to be associated with ancient river management. Essentially, anthropogenic modification caused the river to shift, creating a 12.4×103 km2 area with elevated trace metals; characterized by clear metal deposition gradients. Geographical factors related to the ancient river mouth had the most significant influences on Zn (explained by distance to the river mouth, DTM) and Cd (DTM and sediment salinity), while the sediment absorptive capacity was associated with the reallocation of Cu (clay, silt, and iron), Ni (clay and iron), and Pb (silt and iron). Trace metal legacies showed stronger influences on prokaryotic diversity than on micro-eukaryotic diversity, with the former best described by changes in rare, rather than dominant families and classes, and explainable by an "overlapping micro-niche" model. The ancient river's legacies provide evidence of longer-term human disturbance over hundreds of years; as its impacts on associated benthic microbiomes have led to lessons for modern-day waterway management of benthic ecosystems.
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Affiliation(s)
- Hualong Hong
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China; School of Plant and Environmental Sciences, Virginia Polytechnic Institute and State University, Blacksburg 24061, Virginia, USA.
| | - Junwei Li
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China; Key Laboratory of the Ministry of Ecology of Rare and Endangered Species and Environmental Protection, Guangxi Normal University, Guilin 541004, Guangxi, China.
| | - Qiang Wang
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China.
| | - Haoliang Lu
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China.
| | - Jingchun Liu
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China.
| | - Yun-Wei Dong
- State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen 361102, Fujian, China.
| | - Jie Zhang
- Key Laboratory of Urban Environment Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen 361021, Fujian, China.
| | - Jian Li
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China; School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
| | - Mark A Williams
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China; School of Plant and Environmental Sciences, Virginia Polytechnic Institute and State University, Blacksburg 24061, Virginia, USA.
| | - Bangqin Huang
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China; State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen 361102, Fujian, China.
| | - Chongling Yan
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, Xiamen University, Xiamen 361102, Fujian, China; State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen 361102, Fujian, China.
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Parada J, Rubilar O, Diez MC, Cea M, Sant'Ana da Silva A, Rodríguez-Rodríguez CE, Tortella GR. Combined pollution of copper nanoparticles and atrazine in soil: Effects on dissipation of the pesticide and on microbiological community profiles. J Hazard Mater 2019; 361:228-236. [PMID: 30196035 DOI: 10.1016/j.jhazmat.2018.08.042] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2018] [Revised: 08/02/2018] [Accepted: 08/11/2018] [Indexed: 05/23/2023]
Abstract
Copper nanoparticles (NCu) have been proposed as an antimicrobial agent in agriculture. Therefore, NCu may interact with numerous pollutants including pesticides. Little is known about the combined effects of NCu and pesticides in soil. This study aimed at assessing the impact of NCu combined with the herbicide atrazine (ATZ) on soil. We focused on assessing the adsorption and dissipation of ATZ in the presence of NCu and the changes in microbial community profiles. First, ATZ adsorption isotherms (described using the Freundlich equation) were evaluated. After that, soil samples were spiked with NCu (40-60 nm) at 0.05 and 0.15% w/w and ATZ (3 mg a.i kg-1) and incubated for 30 days. The results showed that ATZ adsorption is favored by the presence of NCu. On the other hand, NCu at 0.15% w/w caused a significant decrease in ATZ dissipation, increasing its half-life from 6 to 37 days. Microbial community profiles (bacteria, fungi and nitrifying bacteria) remained relatively stable throughout the evaluated period. Therefore, our findings suggest that NCu can increase the persistence of ATZ in soil, which may be mostly associated to physical-chemical interaction with soil particles more than a microbial impact.
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Affiliation(s)
- J Parada
- Doctoral Program in Sciences of Natural Resources, Universidad de La Frontera, Temuco, Chile
| | - O Rubilar
- Departamento de Ingeniería Química, Universidad de La Frontera, Temuco, Chile; Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Temuco, Chile; Laboratorio de Nanobiotecnología Ambiental, Universidad de La Frontera, Temuco, Chile
| | - M C Diez
- Departamento de Ingeniería Química, Universidad de La Frontera, Temuco, Chile; Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Temuco, Chile
| | - M Cea
- Departamento de Ingeniería Química, Universidad de La Frontera, Temuco, Chile
| | - A Sant'Ana da Silva
- National Institute of Technology, Ministry of Science, Technology, Innovation and Communication, 20081-312, RJ, Brazil; Federal University of Rio de Janeiro, Department of Biochemistry, 21941-909, RJ, Brazil
| | - C E Rodríguez-Rodríguez
- Centro de Investigación en Contaminación Ambiental (CICA), Universidad de Costa Rica, 2060 San José, Costa Rica
| | - G R Tortella
- Departamento de Ingeniería Química, Universidad de La Frontera, Temuco, Chile; Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Temuco, Chile; Laboratorio de Nanobiotecnología Ambiental, Universidad de La Frontera, Temuco, Chile.
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Lim JS, Yang SH, Kim BS, Lee EY. Comparison of microbial communities in swine manure at various temperatures and storage times. Asian-Australas J Anim Sci 2018; 31:1373-1380. [PMID: 29381907 PMCID: PMC6043449 DOI: 10.5713/ajas.17.0704] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 12/21/2017] [Indexed: 11/27/2022]
Abstract
Objective This study was designed to investigate the effects of temperature and storage time on the evolution of bacterial communities in swine manure. Methods Manure was stored at −20°C, 4°C, 20°C, or 37°C and sampled at 7-day intervals over 28 days of storage, for a total of 5 time points. To assess the bacterial species present, 16S ribosomal RNA gene sequences were analyzed using pyrosequencing. Results After normalization, 113,934 sequence reads were obtained, with an average length of 466.6±4.4 bp. The diversity indices of the communities reduced as temperature and storage time increased, and the slopes of rarefaction curves decreased from the second week in samples stored at −20°C and 4°C. These results indicate that the richness of the bacterial community in the manure reduced as temperature and storage time increased. Firmicutes were the dominant phylum in all samples examined, ranging from 89.3% to 98.8% of total reads, followed by Actinobacteria, which accounted for 0.6% to 7.9%. A change in community composition was observed in samples stored at 37°C during the first 7 days, indicating that temperature plays an important role in determining the microbiota of swine manure. Clostridium, Turicibacter, Streptococcus, and Lactobacillus within Firmicutes, and Corynebacterium within Actinobacteria were the most dominant genera in fresh manure and all stored samples. Conclusion Based on our findings, we propose Clostridium as an indicator genus of swine manure decomposition in an anaerobic environment. The proportions of dominant genera changed in samples stored at 20°C and 37°C during the fourth week. Based on these results, it was concluded that the microbial communities of swine manure change rapidly as storage time and temperature increase.
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Affiliation(s)
- Joung-Soo Lim
- Animal Environment Division, National Institute of Animal Science, RDA, Wanju 55365, Korea
| | - Seung Hak Yang
- Hanwoo Research Institute, National Institute of Animal Science, RDA, Pyeongchang, 25340, Korea
| | - Bong-Soo Kim
- Department of Life Science, Hallym University, Chuncheon 24252, Korea
| | - Eun Young Lee
- Department of Environmental and Energy Engineering, The University of Suwon, Suwon 18323, Korea
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