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Wilcox TM, Jensen MR. Drawing a line in the sand: Environmental DNA population genomics. Mol Ecol Resour 2022; 22:2455-2457. [PMID: 35837874 DOI: 10.1111/1755-0998.13686] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 07/08/2022] [Indexed: 11/27/2022]
Affiliation(s)
- Taylor Matthew Wilcox
- USDA Forest Service, Rocky Mountain Research Station, National Genomics Center for Wildlife and Fish Conservation, 800 E Beckwith Ave, Missoula, MT, USA
| | - Mads Reinholdt Jensen
- Department of Biology, Aarhus University, Ny Munkegade 116, Building 1540, Aarhus C, Denmark
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2
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Stenhouse A, Perry T, Grützner F, Rismiller P, Koh LP, Lewis M. COVID restrictions impact wildlife monitoring in Australia. Biol Conserv 2022; 267:109470. [PMID: 35136243 PMCID: PMC8814614 DOI: 10.1016/j.biocon.2022.109470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Revised: 01/16/2022] [Accepted: 01/21/2022] [Indexed: 05/04/2023]
Abstract
The global COVID-19 pandemic has imposed restrictions on people's movement, work and access to places at multiple international, national and sub-national scales. We need a better understanding of how the varied restrictions have impacted wildlife monitoring as gaps in data continuity caused by these disruptions may limit future data use and analysis. To assess the effect of different levels of COVID-19 restrictions on both citizen science and traditional wildlife monitoring, we analyse observational records of a widespread and iconic monotreme, the Australian short-beaked echidna (Tachyglossus aculeatus), in three states of Australia. We compare citizen science to observations from biodiversity data repositories across the three states by analysing numbers of observations, coverage in protected areas, and geographic distribution using an index of remoteness and accessibility. We analyse the effect of restriction levels by comparing these data from each restriction level in 2020 with corresponding periods in 2018-2019. Our results indicate that stricter and longer restrictions reduced numbers of scientific observations while citizen science showed few effects, though there is much variation due to differences in restriction levels in each state. Geographic distribution and coverage of protected and non-protected areas were also reduced for scientific monitoring while citizen science observations were little affected. This study shows that citizen science can continue to record accurate and widely distributed species observational data, despite pandemic restrictions, and thus demonstrates the potential value of citizen science to other researchers who require reliable data during periods of disruption.
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Affiliation(s)
- Alan Stenhouse
- School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia
| | - Tahlia Perry
- School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia
- The Environment Institute, University of Adelaide, Adelaide, SA 5005, Australia
| | - Frank Grützner
- School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia
- The Environment Institute, University of Adelaide, Adelaide, SA 5005, Australia
| | - Peggy Rismiller
- School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia
| | - Lian Pin Koh
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Megan Lewis
- School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia
- The Environment Institute, University of Adelaide, Adelaide, SA 5005, Australia
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Che TQ, Hickey GM. Assessing the potential for collaborative governance to support cumulative effects assessment in the Indigenous Cree territory of Eeyou Istchee, Canada. J Environ Manage 2021; 298:113444. [PMID: 34375919 DOI: 10.1016/j.jenvman.2021.113444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 07/23/2021] [Accepted: 07/29/2021] [Indexed: 06/13/2023]
Abstract
This paper explores the potential for collaborative governance approaches to support Cumulative Effects Assessment (CEA) in the Cree territory of Eeyou Istchee, located in Northern Quebec, Canada, where a long history of large-scale hydroelectricity development, mining and forestry activities have negatively affected wildlife populations, imposing burdens on the traditional food systems and livelihoods of local Indigenous communities. Drawing on key informant interviews with policy actors from government, non-government and private sector organizations working on Impact Assessment in Eeyou Istchee, the potential for more decentralized and networked approaches to regional wildlife monitoring and baseline data collection in support of CEA is considered. Results suggest a shared willingness to collaborate towards improving the overall regional environmental conditions and to generate long-term data on wildlife population and distribution. Challenges include the absence of essential supporting programs (land-use plans, regional environmental frameworks, lead monitoring agencies, designated funding), and high levels of distrust between proponents and NGOs which combine to suppress the initiation of collaborative governance processes as well as the potential utility of any regional monitoring program that might be established. The need for leadership to facilitate reciprocal knowledge flows among actors, build trust and enable long-term cooperative structures based on a shared vision and goal congruency is identified.
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Affiliation(s)
- Tian Qi Che
- Department of Natural Resource Sciences, Faculty of Agricultural and Environmental Sciences, McGill University, Montreal, Quebec, Canada
| | - Gordon M Hickey
- Department of Natural Resource Sciences, Faculty of Agricultural and Environmental Sciences, McGill University, Montreal, Quebec, Canada.
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Whiteside TS, Brand AD, Aucott TJ, DiPrete DP. Improved field-portable system to measure Cs-137 in wildlife. J Environ Radioact 2020; 223-224:106394. [PMID: 32861172 DOI: 10.1016/j.jenvrad.2020.106394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2020] [Revised: 08/17/2020] [Accepted: 08/19/2020] [Indexed: 06/11/2023]
Abstract
We have developed an improved system to measure Cs-137 in wildlife at the Savannah River Site. This field-portable system consists of a shielded 5 cm by 10 cm by 40 cm NaI detector controlled by an Ametek Ortec Digibase. Measurement of an animal's radioactivity is made by placing the animal at a predefined location on the detector system for a one minute count-time. The counts, animal type, and animal weight are then used as inputs to an algorithm which calculates the amount of Cs-137 within the whole animal and within the edible meat portion of the animal. The results from these calculations are used to estimate the received dose from eating this animal and is included in the Savannah River Site's Hunter Dose Tracking System. This system has a detection limit of 0.60 pCi/g (22.20 Bq/kg) with a typical measurement uncertainty of less than 0.32 pCi/g (11.84 Bq/kg).
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Affiliation(s)
- Tad S Whiteside
- Savannah River National Laboratory, Savannah River Site, Aiken, SC 29808, United States of America.
| | - Alexander D Brand
- Savannah River National Laboratory, Savannah River Site, Aiken, SC 29808, United States of America.
| | - Timothy J Aucott
- Savannah River National Laboratory, Savannah River Site, Aiken, SC 29808, United States of America.
| | - David P DiPrete
- Savannah River National Laboratory, Savannah River Site, Aiken, SC 29808, United States of America.
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Winterl A, Richter S, Houstin A, Nesterova AP, Bonadonna F, Schneider W, Fabry B, Le Bohec C, Zitterbart DP. micrObs - A customizable time-lapse camera for ecological studies. HardwareX 2020; 8:e00134. [PMID: 35498253 PMCID: PMC9041239 DOI: 10.1016/j.ohx.2020.e00134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Revised: 08/13/2020] [Accepted: 08/15/2020] [Indexed: 06/14/2023]
Abstract
Camera traps for motion-triggered or continuous time-lapse recordings are readily available on the market. For demanding applications in ecology and environmental sciences, however, commercial systems often lack flexibility to freely adjust recording time intervals, suffer from mechanical component wear, and can be difficult to combine with auxiliary sensors such as GPS, weather stations, or light sensors. We present a robust time-lapse camera system that has been operating continuously since 2013 under the harsh climatic conditions of the Antarctic and Subantarctic regions. Thus far, we have recorded over one million images with individual cameras. The system consumes 122 mW of power in standby mode and captures up to 200,000 high-resolution (16 MPix) images without maintenance such as battery or image memory replacement. It offers time-lapse intervals between 2 s and 1 h, low-light or night-time power saving, and data logging capabilities for additional inputs such as GPS and weather data.
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Affiliation(s)
- Alexander Winterl
- Department of Physics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany
- Department of Applied Ocean Physics and Engineering, Woods Hole Oceanographic Institution, Woods Hole, USA
| | - Sebastian Richter
- Department of Physics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany
- Department of Applied Ocean Physics and Engineering, Woods Hole Oceanographic Institution, Woods Hole, USA
| | - Aymeric Houstin
- Centre Scientifique de Monaco, Département de Biologie Polaire, Monaco, Monaco
- Université de Strasbourg, CNRS, IPHC, UMR 7178, Strasbourg, France
| | - Anna P. Nesterova
- INRAE, CNRS, Université de Tours, PRC, UMR 7247, Nouzilly, France
- CEFE, Univ Montpellier, CNRS, Univ Paul Valéry Montpellier 3, EPHE, IRD, Montpellier, France
| | - Francesco Bonadonna
- CEFE, Univ Montpellier, CNRS, Univ Paul Valéry Montpellier 3, EPHE, IRD, Montpellier, France
| | - Werner Schneider
- Department of Physics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany
| | - Ben Fabry
- Department of Physics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany
| | - Céline Le Bohec
- Centre Scientifique de Monaco, Département de Biologie Polaire, Monaco, Monaco
- Université de Strasbourg, CNRS, IPHC, UMR 7178, Strasbourg, France
| | - Daniel P. Zitterbart
- Department of Physics, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany
- Department of Applied Ocean Physics and Engineering, Woods Hole Oceanographic Institution, Woods Hole, USA
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Abstract
Background Wombats are large, nocturnal herbivores that build burrows in a variety of habitats, including grassland communities, and can come into conflict with people. Counting the number of active burrows provides information on the local distribution and abundance of wombats and could prove to be an important management tool to monitor population numbers over time. We compared traditional ground surveys and a new method employing drones, to determine if drones could be used to effectively identify and monitor bare-nosed wombat burrows. Results We surveyed burrows using both methods in eight 5-ha transects in grassland, that was interspersed with patches of tussock grassland. Ground surveys were conducted by systematically walking transects and searching for burrows. Drone surveys involved programming flights over transects to capture multiple images, from which an orthomosaic image of each transect was produced. These were subsequently viewed using ArcMap to detect burrows. A total of 204 individual burrows were recorded by drone and/or ground survey methods. In grassland, the methods were equally effective in terms of the numbers of burrows detected in transects. In the smaller areas of tussock grassland, ground surveys detected significantly more burrows, because burrow openings were obscured in orthomosaic images by overhanging grasses. There was agreement between the methods as to whether burrows were potentially active or inactive for most burrows in both vegetation communities. However, image interpretation tended to classify grassland burrows as potentially active. Overall time taken to conduct surveys was similar for both methods, but ground surveys utilised three observers and more time in the field. Conclusions Drones provide an effective means to survey bare-nosed wombat burrows that are visible from the air, particularly in areas not accessible to observers and vehicles. Furthermore, drones provide alternative options for monitoring burrows at the landscape level, and for monitoring wombat populations based on observable changes in burrow appearance over time.
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Affiliation(s)
- Julie M Old
- School of Science and Health, Western Sydney University, Hawkesbury Campus, Locked Bag 1797, Penrith, NSW, 2751, Australia.
| | - Simon H Lin
- School of Science and Health, Western Sydney University, Hawkesbury Campus, Locked Bag 1797, Penrith, NSW, 2751, Australia
| | - Michael J M Franklin
- School of Science and Health, Western Sydney University, Hawkesbury Campus, Locked Bag 1797, Penrith, NSW, 2751, Australia
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Abstract
Citizen science approaches are of great interest for their potential to efficiently and sustainably monitor wildlife populations on both public and private lands. Here we present two studies that worked with volunteers to set camera traps for ecological surveys. The photographs recorded by these citizen scientists were archived and verified using the eMammal software platform, providing a professional grade, vouchered database of biodiversity records. Motivated by managers’ concern with perceived high bear activity, our first example enlisted the help of homeowners in a short-term study to compare black bear activity inside a National Historic Site with surrounding private land. We found similar levels of bear activity inside and outside the NHS, and regional comparisons suggest the bear population is typical. Participants benefited from knowing their local bear population was normal and managers refocused bear management given this new information. Our second example is a continuous survey of wildlife using the grounds of a nature education center that actively manages habitat to maintain a grassland prairie. Center staff incorporated the camera traps into educational programs, involving visitors with camera setup and picture review. Over two years and 5,968 camera-nights this survey has collected 41,393 detections of 14 wildlife species. Detection rates and occupancy were higher in open habitats compared to forest, suggesting that the maintenance of prairie habitat is beneficial to some species. Over 500 volunteers of all ages participated in this project over two years. Some of the greatest benefits have been to high school students, exemplified by a student with autism who increased his communication and comfort level with others through field work with the cameras. These examples show how, with the right tools, training and survey design protocols, citizen science can be used to answer a variety of applied management questions while connecting participants with their secretive mammal neighbors.
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Affiliation(s)
- Arielle Waldstein Parsons
- North Carolina Museum of Natural Sciences, Raleigh, NC, USA.,Department of Forestry & Environmental Resources, North Carolina State University, Raleigh, NC, USA
| | | | - Robert Costello
- Smithsonian's National Museum of Natural History, Washington, DC, USA
| | - Roland Kays
- North Carolina Museum of Natural Sciences, Raleigh, NC, USA.,Department of Forestry & Environmental Resources, North Carolina State University, Raleigh, NC, USA
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Si X, Kays R, Ding P. How long is enough to detect terrestrial animals? Estimating the minimum trapping effort on camera traps. PeerJ 2014; 2:e374. [PMID: 24868493 PMCID: PMC4017883 DOI: 10.7717/peerj.374] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2014] [Accepted: 04/18/2014] [Indexed: 11/26/2022] Open
Abstract
Camera traps is an important wildlife inventory tool for estimating species diversity at a site. Knowing what minimum trapping effort is needed to detect target species is also important to designing efficient studies, considering both the number of camera locations, and survey length. Here, we take advantage of a two-year camera trapping dataset from a small (24-ha) study plot in Gutianshan National Nature Reserve, eastern China to estimate the minimum trapping effort actually needed to sample the wildlife community. We also evaluated the relative value of adding new camera sites or running cameras for a longer period at one site. The full dataset includes 1727 independent photographs captured during 13,824 camera days, documenting 10 resident terrestrial species of birds and mammals. Our rarefaction analysis shows that a minimum of 931 camera days would be needed to detect the resident species sufficiently in the plot, and c. 8700 camera days to detect all 10 resident species. In terms of detecting a diversity of species, the optimal sampling period for one camera site was c. 40, or long enough to record about 20 independent photographs. Our analysis of evaluating the increasing number of additional camera sites shows that rotating cameras to new sites would be more efficient for measuring species richness than leaving cameras at fewer sites for a longer period.
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Affiliation(s)
- Xingfeng Si
- The Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, College of Life Sciences, Zhejiang University , Hangzhou, Zhejiang , China
| | - Roland Kays
- North Carolina Museum of Natural Sciences & NC State University , Raleigh, NC , USA
| | - Ping Ding
- The Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, College of Life Sciences, Zhejiang University , Hangzhou, Zhejiang , China
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