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Alsharafi SS, Badawi AM, El-Sharkawy AMM. Eddy currents analysis methods for an MRI longitudinal gradient coil. Magn Reson Med 2023; 90:2158-2174. [PMID: 37465874 DOI: 10.1002/mrm.29777] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2023] [Revised: 05/31/2023] [Accepted: 06/05/2023] [Indexed: 07/20/2023]
Abstract
PURPOSE The rapid switching of the gradient fields induces eddy currents in neighboring metallic structures, causing undesirable effects. Numerical computations are thus required to understand eddy-currents effects for designing/implementing mitigation (involving passive shielding) and compensating techniques (using pre-emphasis). Previously, the network-analysis (NA) method was introduced to compute z-gradient eddy currents, although limited to a circularly symmetric and unconnected coil. Multi-layer integral method (MIM) method was recently introduced, modifying the circuit equation involving stream functions. We tailor MIM (TMIM) for a more general eddy-currents analysis in thin structures. Z-gradient eddy currents are analyzed and then compared using three methods (NA, TMIM, and Ansys). The analysis helps to evaluate the efficiency of passive shielding and to compensate eddy currents. METHODS NA and TMIM computational frameworks for harmonic and transient eddy-currents analysis were implemented and cross-validated against Ansys Maxwell. A pre-emphasis pulse was modeled for compensating eddy currents. RESULTS Eddy-currents analysis of an unconnected z-gradient coil in both the passive shield and cryostat were computed, and results were comparable to the least computationally efficient Ansys simulations. Although NA computations are fast, TMIM is implemented with reasonable efficiency and applied to circularly unsymmetric geometries. TMIM computations were further validated against Ansys using a connected z-gradient. Our computations allowed the effective evaluation of the performance of three various passive-shielding configurations, non-capped, capped, and slitted (for the first time), and an effective pre-emphasis compensation model was computed. CONCLUSION Three eddy-currents analysis methods were studied and compared. Computationally efficient TMIM allows both harmonic and transient eddy-currents analysis involving different/complex gradient configurations/situations as well as involved shielding structures. Eddy-currents pre-emphasis compensation was demonstrated.
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Affiliation(s)
- Sadeq S Alsharafi
- Systems and Biomedical Engineering, Faculty of Engineering, Cairo University, Giza, Egypt
| | - Ahmed M Badawi
- Systems and Biomedical Engineering, Faculty of Engineering, Cairo University, Giza, Egypt
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Hirata F. Structural Fluctuation, Relaxation, and Folding of Protein: An Approach Based on the Combined Generalized Langevin and RISM/3D-RISM Theories. Molecules 2023; 28:7351. [PMID: 37959769 PMCID: PMC10647392 DOI: 10.3390/molecules28217351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Revised: 09/25/2023] [Accepted: 09/28/2023] [Indexed: 11/15/2023] Open
Abstract
In 2012, Kim and Hirata derived two generalized Langevin equations (GLEs) for a biomolecule in water, one for the structural fluctuation of the biomolecule and the other for the density fluctuation of water, by projecting all the mechanical variables in phase space onto the two dynamic variables: the structural fluctuation defined by the displacement of atoms from their equilibrium positions, and the solvent density fluctuation. The equation has an expression similar to the classical Langevin equation (CLE) for a harmonic oscillator, possessing terms corresponding to the restoring force proportional to the structural fluctuation, as well as the frictional and random forces. However, there is a distinct difference between the two expressions that touches on the essential physics of the structural fluctuation, that is, the force constant, or Hessian, in the restoring force. In the CLE, this is given by the second derivative of the potential energy among atoms in a protein. So, the quadratic nature or the harmonicity is only valid at the minimum of the potential surface. On the contrary, the linearity of the restoring force in the GLE originates from the projection of the water's degrees of freedom onto the protein's degrees of freedom. Taking this into consideration, Kim and Hirata proposed an ansatz for the Hessian matrix. The ansatz is used to equate the Hessian matrix with the second derivative of the free-energy surface or the potential of the mean force of a protein in water, defined by the sum of the potential energy among atoms in a protein and the solvation free energy. Since the free energy can be calculated from the molecular mechanics and the RISM/3D-RISM theory, one can perform an analysis similar to the normal mode analysis (NMA) just by diagonalizing the Hessian matrix of the free energy. This method is referred to as the Generalized Langevin Mode Analysis (GLMA). This theory may be realized to explore a variety of biophysical processes, including protein folding, spectroscopy, and chemical reactions. The present article is devoted to reviewing the development of this theory, and to providing perspective in exploring life phenomena.
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Affiliation(s)
- Fumio Hirata
- Institute for Molecular Science, National Institute of Natural Sciences, Okazaki 444-8585, Japan
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Xiao X, Zhou R, Ma X, Xu R. Harmonic Phasor Estimation Method Considering Dense Interharmonic Interference. Entropy (Basel) 2023; 25:236. [PMID: 36832603 PMCID: PMC9955660 DOI: 10.3390/e25020236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Revised: 01/11/2023] [Accepted: 01/13/2023] [Indexed: 06/18/2023]
Abstract
Due to the limitation of frequency resolution and the spectrum leakage caused by signal windowing, the spectrums of harmonic and interharmonic components with close frequencies overlap each other. When the dense interharmonic (DI) components are close to the harmonic spectrum peaks, the harmonic phasor estimation accuracy is seriously reduced. To address this problem, a harmonic phasor estimation method considering DI interference is proposed in this paper. Firstly, based on the spectral characteristics of the dense frequency signal, the phase and amplitude characteristics are used to determine whether DI interference exists in the signal. Secondly, an autoregressive model is established by using the autocorrelation of the signal. Data extrapolation is performed on the basis of the sampling sequence to improve the frequency resolution and eliminate the interharmonic interference. Finally, the estimated values of harmonic phasor, frequency and rate of change of frequency are obtained. The simulation and some experimental results demonstrate that the proposed method can accurately estimate the parameters of harmonic phasors when DIs exist in the signal, and has a certain anti-noise capability and dynamic performance.
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Sánchez-Fraga R, Tecpoyotl-Torres M, Mejía I, Mañón JO, Riestra LE, Alcantar-Peña J. Optical Sensor, Based on an Accelerometer, for Low-Frequency Mechanical Vibrations. Micromachines (Basel) 2022; 13:1462. [PMID: 36144085 PMCID: PMC9502717 DOI: 10.3390/mi13091462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 08/26/2022] [Accepted: 08/31/2022] [Indexed: 06/16/2023]
Abstract
This article documents the design, manufacture, and testing of a silicon inertial optical sensor for low-frequency (lower than 2 kHz) applications. Three accelerometer designs optimized by parameterization using Finite Element Analysis were considered. The accelerometers were manufactured and the one with the highest performance at low frequency was chosen for testing, which was attached to a steel package. The feasibility of using probes, based on micro-machined sensing elements, to measure mechanical vibrations with high resolution was also studied. The detection is performed with an air interferometer, eliminating the need for electric signals that are susceptible to electromagnetic interference and large temperature variations. From the fabrication technology using only a silicon wafer with both sides etched, the frequency response of the sensor, temperature operation (higher than 85 °C) and with a resolution of 17.5 nm, it was concluded that is achievable and feasible to design and manufacture an optical vibration sensor for potential harsh environments with a low cost.
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Affiliation(s)
- Rodolfo Sánchez-Fraga
- Gerencia de Microtecnologías del Centro de Ingeniería y Desarrollo Industrial, CIDESI, Querétaro 76125, Mexico
| | - Margarita Tecpoyotl-Torres
- Centro de Investigación en Ingeniería y Ciencias Aplicadas de la Universidad Autónoma del Estado de Morelos, CIICAp-UAEM, Morelos 62209, Mexico
| | - Israel Mejía
- Gerencia de Microtecnologías del Centro de Ingeniería y Desarrollo Industrial, CIDESI, Querétaro 76125, Mexico
| | | | | | - Jesús Alcantar-Peña
- Gerencia de Microtecnologías del Centro de Ingeniería y Desarrollo Industrial, CIDESI, Querétaro 76125, Mexico
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Dyomin V, Davydova A, Kirillov N, Morgalev S, Naumova E, Olshukov A, Polovtsev I. In Situ Measurements of Plankton Biorhythms Using Submersible Holographic Camera. Sensors (Basel) 2022; 22:6674. [PMID: 36081129 PMCID: PMC9460462 DOI: 10.3390/s22176674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 08/27/2022] [Accepted: 08/29/2022] [Indexed: 06/15/2023]
Abstract
The paper presents a diagnostic complex for plankton studies using the miniDHC (digital holographic camera). Its capabilities to study the rhythmic processes in plankton ecosystems were demonstrated using the natural testing in Lake Baikal in summer. The results of in situ measurements of plankton to detect the synchronization of collective biological rhythms with medium parameters are presented and interpreted. The most significant rhythms in terms of the correlation of their parameters with medium factors are identified. The study shows that the correlation with water temperature at the mooring site has the greatest significance and reliability. The results are verified with biodiversity data obtained by the traditional mesh method. The experience and results of the study can be used for the construction of a stationary station to monitor the ecological state of the water area through the digitalization of plankton behavior.
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Affiliation(s)
- Victor Dyomin
- Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia
| | - Alexandra Davydova
- Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia
| | - Nikolay Kirillov
- Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia
| | - Sergey Morgalev
- Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia
| | - Elena Naumova
- Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia
- Laboratory of Ichtyology, Limnological Institute SB RAS, 3 Ulan-Batorskaya Street, 664033 Irkutsk, Russia
| | - Alexey Olshukov
- Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia
| | - Igor Polovtsev
- Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia
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Tegegn TA. On the Inertial Range Bounds of K-41-like Magnetohydrodynamics Turbulence. Entropy (Basel) 2022; 24:833. [PMID: 35741553 DOI: 10.3390/e24060833] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 12/23/2021] [Accepted: 12/31/2021] [Indexed: 11/25/2022]
Abstract
The spectral slope of magnetohydrodynamic (MHD) turbulence varies depending on the spectral theory considered; −3/2 is the spectral slope in Kraichnan–Iroshnikov–Dobrowolny (KID) theory, −5/3 in Marsch–Matthaeus–Zhou and Goldreich–Sridhar theories, also called Kolmogorov-like (K-41-like) MHD theory, the combination of the −5/3 and −3/2 scales in Biskamp, and so on. A rigorous mathematical proof to any of these spectral theories is of great scientific interest. Motivated by the 2012 work of A. Biryuk and W. Craig (Physica D 241(2012) 426–438), we establish inertial range bounds for K-41-like phenomenon in MHD turbulent flow through a mathematical rigor; a range of wave numbers in which the spectral slope of MHD turbulence is proportional to −5/3 is established and the upper and lower bounds of this range are explicitly formulated. We also have shown that the Leray weak solution of the standard MHD model is bonded in the Fourier space, the spectral energy of the system is bounded and its average over time decreases in time.
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Barbieri D. Reconstructing Group Wavelet Transform From Feature Maps With a Reproducing Kernel Iteration. Front Comput Neurosci 2022; 16:775241. [PMID: 35370587 PMCID: PMC8965351 DOI: 10.3389/fncom.2022.775241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Accepted: 01/28/2022] [Indexed: 11/13/2022] Open
Abstract
In this article, we consider the problem of reconstructing an image that is downsampled in the space of its SE(2) wavelet transform, which is motivated by classical models of simple cell receptive fields and feature preference maps in the primary visual cortex. We prove that, whenever the problem is solvable, the reconstruction can be obtained by an elementary project and replace iterative scheme based on the reproducing kernel arising from the group structure, and show numerical results on real images.
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Affiliation(s)
- Davide Barbieri
- Departamento de Matemáticas, Universidad Autónoma de Madrid, Madrid, Spain
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Wu HT, Haryadi B, Chen JJ. A First Step towards a Comprehensive Approach to Harmonic Analysis of Synchronous Peripheral Volume Pulses: A Proof-of-Concept Study. J Pers Med 2021; 11:1263. [PMID: 34945735 DOI: 10.3390/jpm11121263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2021] [Revised: 11/24/2021] [Accepted: 11/25/2021] [Indexed: 11/27/2022] Open
Abstract
The harmonic analysis (HA) of arterial radial pulses in humans has been widely investigated in recent years for clinical applications of traditional Chinese medicine. This study aimed at establishing the validity of carrying out HA on synchronous peripheral volume pulses for predicting diabetes-induced subtle changes in heart energy. In this study, 141 subjects (Group 1: 63 healthy elderly subjects; Group 2: 78 diabetic subjects) were enrolled at the same hospital. After routine blood sampling, all synchronous electrocardiogram (ECG) and photoplethysmography (PPG) measurements (i.e., at the six locations) were acquired in the morning. HA of synchronous peripheral volume pulses and radial pulse waves was performed and analyzed after a short period of an ensemble averaging process based on the R-wave peak location. This study utilized HA for the peripheral volume pulses and found that the averaged total pulse energy (i.e., the C0 of the DTFS) was identical in the same subject. A logistic regression model with C0 and a waist circumference variable showed a graded association with the risk of developing type 2 diabetes. The adjusted odds ratio for C0 and the waist circumference were 0.986 (95% confidence interval: 0.977, 0.994) and 1.130 (95% confidence interval: 1.045, 1.222), respectively. C0 also showed significant negative correlations with risk factors for type 2 diabetes mellitus, including glycosylated hemoglobin and fasting plasma glucose (r = −0.438, p < 0.001; r = −0.358, p < 0.001, respectively). This study established a new application of harmonic analysis in synchronous peripheral volume pulses for clinical applications. The findings showed that the C0 could be used as a prognostic indicator of a protective factor for predicting type 2 diabetes.
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Dai Y, Armand M. Vibration-based drilling depth estimation of bone. Int J Med Robot 2021; 17:e2233. [PMID: 33533110 DOI: 10.1002/rcs.2233] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 01/17/2021] [Accepted: 01/18/2021] [Indexed: 01/15/2023]
Abstract
Drilling is one of the most common forms of tissue removal procedures, and drilling to a desired depth contributes to avoid injury to the soft tissue beyond and ensure implant stability. The deformation of the human musculoskeletal system has been a common problem in many drilling processes, making it difficult to achieve accurate estimation of the drilling depth. To remedy this problem, a dynamic model is presented to describe the relationship between the axial vibration of the drill and the feed rate. During drilling process, the amplitude of the main harmonic is estimated from the high-frequency component of the acceleration signal, while the short-time integral of the low-frequency part is calculated. Both the initial contact of the drilling tool to the bone and breakthrough are identified by comparing either the harmonic amplitude or the short-time integral. The harmonic amplitude is mapped to the data from a non-contact position sensor tracking the feed rate of the drill. Multiple drilling experiments on both a handheld device and a robotic cutting system demonstrated the effectiveness, stability and accuracy of the method when estimating depth. The mean maximum error for drilling depth estimation is less than 15% of the simulated bone thickness when using the handheld device, while the mean maximum error is less than 5% for the robotic cutting system.
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Affiliation(s)
- Yu Dai
- Institute of Robotics and Automatic Information System, Tianjin Key Laboratory of Intelligent Robotics, College of Artificial Intelligence, Nankai University, Tianjin, People's Republic of China
| | - Mehran Armand
- The Laboratory for Computational Sensing and Robotics, The Johns Hopkins University, Baltimore, Maryland, USA.,Applied Physics Laboratory, The Johns Hopkins University, Laurel, Maryland, USA
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Artale G, Caravello G, Cataliotti A, Cosentino V, Di Cara D, Dipaola N, Guaiana S, Panzavecchia N, Sambataro MG, Tinè G. PQ and Harmonic Assessment Issues on Low-Cost Smart Metering Platforms: A Case Study. Sensors (Basel) 2020; 20:s20216361. [PMID: 33171825 PMCID: PMC7664700 DOI: 10.3390/s20216361] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Revised: 11/01/2020] [Accepted: 11/04/2020] [Indexed: 12/03/2022]
Abstract
This paper presents a feasibility study on how to implement power quality (PQ) metrics in a low-cost smart metering platform. The study is aimed at verifying the possibility of implementing PQ monitoring in distribution networks without replacing existing smart metering devices or adding new modules for PQ measurements, thus zeroing the installation costs. To this aim, an electronic board, currently used for remote energy metering, was chosen as a case study, specifically the STCOMET platform. Starting from the specifications of this device, the possibility of implementing power quality metrics is investigated in order to verify if compliance with standard requirements for PQ instruments can be obtained. Issues related to device features constraints are discussed; possible solutions and correction algorithms are presented and experimentally verified for different PQ metrics with a particular focus on harmonic analysis. The feasibility study takes into account both the use of on-board voltage and current transducers for low voltage applications and also the impact of external instrument transformers on measurement results.
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Affiliation(s)
- Giovanni Artale
- Department of Engineering, Università degli Studi di Palermo, 90128 Palermo, Italy; (G.A.); (G.C.); (A.C.)
| | - Giuseppe Caravello
- Department of Engineering, Università degli Studi di Palermo, 90128 Palermo, Italy; (G.A.); (G.C.); (A.C.)
| | - Antonio Cataliotti
- Department of Engineering, Università degli Studi di Palermo, 90128 Palermo, Italy; (G.A.); (G.C.); (A.C.)
| | - Valentina Cosentino
- Department of Engineering, Università degli Studi di Palermo, 90128 Palermo, Italy; (G.A.); (G.C.); (A.C.)
- Correspondence: (V.C.); (D.D.C.)
| | - Dario Di Cara
- Institute of Marine Engineering (INM), National Research Council (CNR), 90146 Palermo, Italy; (S.G.); (N.P.); (G.T.)
- Correspondence: (V.C.); (D.D.C.)
| | - Nunzio Dipaola
- STMicroelectronics S.r.l., 95121 Catania, Italy; (N.D.); (M.G.S.)
| | - Salvatore Guaiana
- Institute of Marine Engineering (INM), National Research Council (CNR), 90146 Palermo, Italy; (S.G.); (N.P.); (G.T.)
| | - Nicola Panzavecchia
- Institute of Marine Engineering (INM), National Research Council (CNR), 90146 Palermo, Italy; (S.G.); (N.P.); (G.T.)
| | | | - Giovanni Tinè
- Institute of Marine Engineering (INM), National Research Council (CNR), 90146 Palermo, Italy; (S.G.); (N.P.); (G.T.)
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Andrade-Loarca H, Kutyniok G, Öktem O. Shearlets as feature extractor for semantic edge detection: the model-based and data-driven realm. Proc Math Phys Eng Sci 2020; 476:20190841. [PMID: 33363436 PMCID: PMC7735309 DOI: 10.1098/rspa.2019.0841] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Accepted: 11/02/2020] [Indexed: 11/16/2022] Open
Abstract
Semantic edge detection has recently gained a lot of attention as an image-processing task, mainly because of its wide range of real-world applications. This is based on the fact that edges in images contain most of the semantic information. Semantic edge detection involves two tasks, namely pure edge detection and edge classification. Those are in fact fundamentally distinct in terms of the level of abstraction that each task requires. This fact is known as the distracted supervision paradox and limits the possible performance of a supervised model in semantic edge detection. In this work, we will present a novel hybrid method that is based on a combination of the model-based concept of shearlets, which provides probably optimally sparse approximations of a model class of images, and the data-driven method of a suitably designed convolutional neural network. We show that it avoids the distracted supervision paradox and achieves high performance in semantic edge detection. In addition, our approach requires significantly fewer parameters than a pure data-driven approach. Finally, we present several applications such as tomographic reconstruction and show that our approach significantly outperforms former methods, thereby also indicating the value of such hybrid methods for biomedical imaging.
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Affiliation(s)
| | - Gitta Kutyniok
- Institut für Mathematik, Technische Universität Berlin, 10623 Berlin, Germany
- Fakultät Elektrotechnik und Informatik, Technische Universität Berlin, 10587 Berlin, Germany
- Department of Physics and Technology, University of Tromsø, Tromsø, Norway
| | - Ozan Öktem
- Department of Mathematics, KTH - Royal Institute of Technology, SE-100 44 Stockholm, Sweden
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Hu Y, Zhan Y, Han L, Hu P, Ye B, Yu Y. An Angle Error Compensation Method Based on Harmonic Analysis for Integrated Joint Modules. Sensors (Basel) 2020; 20:E1715. [PMID: 32204414 DOI: 10.3390/s20061715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Revised: 03/16/2020] [Accepted: 03/17/2020] [Indexed: 11/30/2022]
Abstract
Nowadays, integrated joint modules are increasingly adopted in manipulators for their advantages of high integration, miniaturization and high repeatability positioning accuracy. The problem of generally low absolute positioning accuracy (namely angle measurement accuracy) must be solved before they can be introduced into the self-driven articulated arm coordinate measuring machine which is under study in our laboratory. In this study, the sources of joint module’s angle error were analyzed and the error model based on harmonic analysis was established. Two integrated joint modules were calibrated on the self-designed calibration platform and the model parameters were deduced, respectively. The angle error was then compensated in the experiments and the results demonstrated that the angle error of the joint modules was reduced by 82.03% on average. The established angle error model can be effectively applied into the self-driven articulated arm coordinated measuring machine.
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Abstract
The consumption of black tea and green tea has been shown to be beneficial for cardiovascular health. Because the chemical composition of the two teas varies widely, the purpose of the study was to investigate whether the consumption of green tea and black tea had different effects on the arterial system. Thirty-three healthy subjects received a single dose of green tea (dose = 0.05 g/kg) and black tea (dose = 0.05 g/kg) in different weeks. Radial blood pressure and radial pulse pressure were measured before and after drinking tea. The harmonic analysis was performed on radial pressure waves, and harmonics (Cns) were recorded. The results showed that both black tea and green tea consumption significantly increased the C1, C2, C6, C7, C8, C9, and C10 of the radial pressure wave. Furthermore, the results confirmed that the consumption effect of green tea on C6-C10 increase is greater than that of black tea. This report also found a subtle difference that consumption of green tea increased C4, whereas consumption of black tea increased C3. We concluded that black tea and green tea have similar patterns in higher harmonics, but with varying degrees.
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Affiliation(s)
- Chi-Wei Chang
- 1 Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
| | - Xiang-Yu Xie
- 2 Department of Geography, National Taiwan University, Taipei, Taiwan
| | - Wei-Kung Wang
- 3 Biophysics Laboratory, Institute of Physics, Academia Sinica, Taipei, Taiwan
| | - Gin-Chung Wang
- 4 Research and Development Department, JinMu Health Technology, Taipei, Taiwan
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Nikitin SS, Kirpatovskii VI, Moiseev SV, Gavrilov IY, Kabanova IV, Makarov AD, Revenko SV. Pelvic Electric Potential as a Marker of Autonomic Dysfunctions and Risk Factor of Neurogenic Arrhythmias in Humans. Bull Exp Biol Med 2019; 166:404-8. [PMID: 30627894 DOI: 10.1007/s10517-019-04360-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2018] [Indexed: 10/27/2022]
Abstract
Differential high-resolution ECG (V1-V2) and pelvic electric potential measured between the coccyx and perineum were recorded simultaneously in resting supine position in men with autonomic nervous system disorders (N=37). In healthy volunteers (N=23), the effective (rms) value of PEP presented by median and interdecile range was 30 (20-80) μV within the frequency band of 0.03-80 Hz. In patients, the corresponding value was significantly higher: 140 (80-280) μV. In both groups, the amplitude harmonic spectrum of pelvic electric potential decreased monotonically with frequency according to 1/f1.6 law. In some patients (N=16), rare single or grouped high-amplitude impulses (up to 1 mV) of pelvic electric potential with total duration of about 1 sec were observed; of them, some persons (N=7) demonstrated practically one-to-one synchronous relations between these impulses and arrhythmia episodes indicating abnormal activity of the autonomic nervous system as their most probable common cause. The high-amplitude pelvic electric potential impulses were also observed in ECG records as interference signals with an amplitude attaining 50 μV. Thus, high-resolution ECG and pelvic electric potential can reveal the risk of abnormal neurogenic influences on the heart. The data obtained are discussed in relation to diagnostics of the autonomic nervous system disorders, neurogenic arrhythmias, and risk of sudden cardiac death.
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Chang CW, Liao KM, Chen YC, Wang SH, Jan MY, Wang GC. Radial Pulse Spectrum Analysis as Risk Markers to Improve the Risk Stratification of Silent Myocardial Ischemia in Type 2 Diabetic Patients. IEEE J Transl Eng Health Med 2018; 6:1900509. [PMID: 30245944 PMCID: PMC6147733 DOI: 10.1109/jtehm.2018.2869091] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/16/2018] [Revised: 07/30/2018] [Accepted: 08/31/2018] [Indexed: 12/14/2022]
Abstract
Diabetic patients with silent myocardial ischemia (SMI) have elevated rates of morbidity and mortality and need intensive care and monitoring. An early predictor of SMI may lead to early diagnosis and medical treatment to prevent progression and adverse clinical events. Therefore, this paper was aimed to evaluate the radial pulse spectrum as risk markers to improve the risk stratification of SMI in type-2 diabetic patients; 195 diabetic patients at high-risk of SMI were enrolled. All patients underwent myocardial perfusion imaging and radial pressure wave measurement. The spectrum analysis of the radial pressure wave was calculated and transformed into Fourier series coefficients Cns and Pns. The risk of SMI (odds ratio: 4.46, 95%, C.I. 1.61–12.4, \documentclass[12pt]{minimal}
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}{}$P<0.01$
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}{}$P<0.05$
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}{}$P<0.05$
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}{}$R=0.46$
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}{}$P<0.05$
\end{document}). The myocardial ischemic score (MIS), combining C2, C3, and P5, the albumin-to-creatinine ratio (ACR), and ABI, presented an excellent risk stratification performance in enrolled patients (odds ratio: 5.78, 95%, C.I. 2.29–14.6, \documentclass[12pt]{minimal}
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}{}$P<0.01$
\end{document}). The area under receiver operating characteristic curves for C2, C3, P5, ABI, ACR, and MIS were 0.66, 0.60, 0.68, 0.51, 0.56, and 0.74, respectively, in identifying SMI. This paper demonstrated that C2 was independently associated with the extent of SMI in multivariable regression analysis. Odds ratio and chi-square tests reflected that C2 could be an important marker for the risk stratification of SMI. Furthermore, MIS, adding radial pulse spectrum analysis to ACR and ABI, could significantly improve the risk stratification of SMI in type-2 diabetic patients compared to any single risk factor.
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Affiliation(s)
- Chi-Wei Chang
- Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan UniversityTaipei10617Taiwan
| | - Kuo-Meng Liao
- Zhongxiao Branch of Taipei City HospitalTaipei11556Taiwan
| | - Ying-Chun Chen
- Zhongxiao Branch of Taipei City HospitalTaipei11556Taiwan
| | | | - Ming-Yie Jan
- Institute of Physics, Academia SinicaTaipei11529Taiwan
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Stanescu T, Jaffray D. Technical Note: Harmonic analysis applied to MR image distortion fields specific to arbitrarily shaped volumes. Med Phys 2018; 45:3705-3712. [PMID: 29799634 DOI: 10.1002/mp.13000] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2017] [Revised: 04/26/2018] [Accepted: 05/15/2018] [Indexed: 11/10/2022] Open
Abstract
PURPOSE Magnetic resonance imaging is expected to play a more important role in radiation therapy given the recent developments in MR-guided technologies. MR images need to consistently show high spatial accuracy to facilitate RT-specific tasks such as treatment planning and in-room guidance. The present study investigates a new harmonic analysis method for the characterization of complex three-dimensional (3D) fields derived from MR images affected by system-related distortions. METHODS An interior Dirichlet problem based on solving the Laplace equation with boundary conditions (BCs) was formulated for the case of a 3D distortion field. The second-order boundary value problem (BVP) was solved using a finite elements method (FEM) for several quadratic geometries - that is, sphere, cylinder, cuboid, D-shaped, and ellipsoid. To stress-test the method and generalize it, the BVP was also solved for more complex surfaces such as a Reuleaux 9-gon and the MR imaging volume of a scanner featuring a high degree of surface irregularities. The BCs were formatted from reference experimental data collected with a linearity phantom featuring a volumetric grid structure. The method was validated by comparing the harmonic analysis results with the corresponding experimental reference fields. RESULTS The harmonic fields were found to be in good agreement with the baseline experimental data for all geometries investigated. In the case of quadratic domains, the percentage of sampling points with residual values larger than 1 mm was 0.5% and 0.2% for the axial components and vector magnitude, respectively. For the general case of a domain defined by the available MR imaging field of view, the reference data showed a peak distortion of about 1 mm and 79% of the sampling points carried a distortion magnitude larger than 1 mm (tolerance intrinsic to the experimental data). The upper limits of the residual values after comparison with the harmonic fields showed max and mean of 1.4 and 0.25 mm, respectively, with only 1.5% of sampling points exceeding 1 mm. CONCLUSIONS A novel harmonic analysis approach relying on finite element methods was introduced and validated for multiple volumes with surface shape functions ranging from simple to highly complex. Since a boundary value problem is solved the method requires input data from only the surface of the desired domain of interest. It is believed that the harmonic method will facilitate (a) the design of new phantoms dedicated for the quantitation of MR image distortions in large volumes and (b) an integrative approach of combining multiple imaging tests specific to radiotherapy into a single test object for routine imaging quality control.
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Affiliation(s)
- T Stanescu
- Princess Margaret Cancer Centre & The Techna Institute, University Health Network, Toronto, ON, M5G 2M9, Canada
- Department of Radiation Oncology, University of Toronto, 610 University Avenue, Toronto, ON, M5G 2M9, Canada
| | - D Jaffray
- Princess Margaret Cancer Centre & The Techna Institute, University Health Network, Toronto, ON, M5G 2M9, Canada
- Department of Radiation Oncology, University of Toronto, 610 University Avenue, Toronto, ON, M5G 2M9, Canada
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Jindal GD, Jain RK, Bhat SN, Pande JA, Sawant MS, Jindal SK, Deshpande AK. Harmonic analysis of peripheral pulse for screening subjects at high risk of diabetes. J Med Eng Technol 2017; 41:437-443. [PMID: 28585476 DOI: 10.1080/03091902.2017.1323968] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Power spectral density (PSD) of peripheral pulses in human has been investigated in the past for its clinical applications. Continuing the efforts, data acquired using Peripheral Pulse Analyser in research projects sponsored by Board of Research in Nuclear Sciences in 207 control subjects, 18 descendants of diabetic patients and 22 patients with systemic hypertension have been subjected to PSD analysis for its study of harmonics. Application software, named Pulse Harmonic Analyser specifically developed for this work, selected 131,072 samples from each data file, obtained PSD, derived 52 PHA parameters and saved them in an Excel sheet. Coefficient of variation in control data was reduced significantly by application of Central Limit Theorem, which enabled use of parametric methods for statistical analysis of the observations. Data in hypertensive patients have shown significant difference in comparison to that of controls in eight parameters at low values of α and β. Data in offspring of diabetic patients also have shown significant difference in one parameter indicating its usefulness in screening subjects with genetic disposition of acquiring Type-II Diabetes. PHA analysis has also yielded sub-harmonic components, which are related to combined variability in the heart rate, pulse volume and pulse morphology and has a potential to become method of choice for real time variability monitoring.
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Affiliation(s)
- G D Jindal
- a Bio-Medical Engineering Department , MGMCET , Navi-Mumbai , India
| | | | - Sushma N Bhat
- c BRNS, Electronics Division , BARC , Mumbai , India
| | - Jyoti A Pande
- d BRNS, Bio-Medical Engineering Department , MGMCET , Navi-Mumbai , India
| | - Manasi S Sawant
- e Department of Bio-Technology , MGMIHS , Navi-Mumbai , India
| | | | - Alaka K Deshpande
- g Medicine Department , Grant Medical College & JJ Hospital , Mumbai , India
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Xavier P, Rauly D, Chamberod E, Martins JMF. Theoretical evidence of maximum intracellular currents versus frequency in an Escherichia coli cell submitted to AC voltage. Bioelectromagnetics 2016; 38:213-219. [PMID: 28012193 DOI: 10.1002/bem.22033] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2016] [Accepted: 12/10/2016] [Indexed: 11/10/2022]
Abstract
In this work, the problem of intracellular currents in longilinear bacteria, such as Escherichia coli, suspended in a physiological medium and submitted to a harmonic voltage (AC), is analyzed using the Finite-Element-based software COMSOL Multiphysics. Bacterium was modeled as a cylindrical capsule, ended by semi-spheres and surrounded by a dielectric cell wall. An equivalent single-layer cell wall was defined, starting from the well-recognized three-shell modeling approach. The bacterium was considered immersed in a physiological medium, which was also taken into account in the modeling. A new complex transconductance was thus introduced, relating the complex ratio between current inside the bacterium and voltage applied between two parallel equipotential planes, separated by a realistic distance. When voltage was applied longitudinally relative to the bacterium main axis, numerical results in terms of frequency response in the 1-20 MHz range for E. coli cells revealed that transconductance magnitude exhibited a maximum at a frequency depending on the cell wall capacitance. This occurred in spite of the purely passive character of the model and could be explained by an equivalent electrical network giving very similar results and showing special conditions for lateral paths of the currents through the cell wall. It is shown that the main contribution to this behavior is due to the conductive part of the current. Bioelectromagnetics. 38:213-219, 2017. © 2016 Wiley Periodicals, Inc.
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Affiliation(s)
- Pascal Xavier
- Institut de Microélectronique, Electromagnétisme et Photonique - Laboratoire d'Hyperfréquences et de Caractérisation (IMEP-LAHC), UMR 5130, CNRS/G-INP/UGA, MINATEC, Grenoble, France.,University Grenoble Alps (UGA), Grenoble, France
| | - Dominique Rauly
- Institut de Microélectronique, Electromagnétisme et Photonique - Laboratoire d'Hyperfréquences et de Caractérisation (IMEP-LAHC), UMR 5130, CNRS/G-INP/UGA, MINATEC, Grenoble, France.,University Grenoble Alps (UGA), Grenoble, France
| | | | - Jean M F Martins
- University Grenoble Alps (UGA), Grenoble, France.,Laboratoire d'étude des Transferts en Hydrologie et Environnement (LTHE), UMR 5564, CNRS/G-INP/IRD/UGA, Grenoble, France
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Abstract
BACKGROUND Preterm birth is a common, costly and dangerous pregnancy complication. Seasonality of risk would suggest modifiable causes. METHODS We examine seasonal effects on preterm birth, using data from the Medical Birth Registry of Norway (2,321,652 births), and show that results based on births are misleading and a fetuses-at-risk approach is essential. In our harmonic-regression Cox proportional hazards model we consider fetal risk of birth between 22 and 37 completed weeks of gestation. We examine effects of both day of year of conception (for early effects) and day of ongoing gestation (for seasonal effects on labour onset) as modifiers of gestational-age-based risk. RESULTS Naïve analysis of preterm rates across days of birth shows compelling evidence for seasonality (P < 10(-152)). However, the reconstructed numbers of conceptions also vary with season (P < 10(-307)), confounding results by inducing seasonal variation in the age distribution of the fetal population at risk. When we instead properly treat fetuses as the individuals at risk, restrict analysis to pregnancies with relatively accurate ultrasound-based assessment of gestational age (available since 1998) and adjust for socio-demographic factors and maternal smoking, we find modest effects of both time of year of conception and time of year at risk, with peaks for early preterm near early January and early July. CONCLUSIONS Analyses of seasonal effects on preterm birth are demonstrably vulnerable to confounding by seasonality of conception, measurement error in conception dating, and socio-demographic factors. The seasonal variation based on fetuses reveals two peaks for early preterm, coinciding with New Year's Day and the early July beginning of Norway's summer break, and may simply reflect a holiday-related pattern of unintended conception.
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Affiliation(s)
- Clarice R Weinberg
- National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA,
| | - Min Shi
- National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA
| | - Lisa A DeRoo
- Department of Global Public Health and Primary Care, University of Bergen, and Medical Birth Registry of Norway, Bergen, Norway and
| | - Olga Basso
- Department of Obstetrics and Gynecology, and Department of Epidemiology, Biostatistics and Occupational Health, McGill University, Montreal, QC, Canada
| | - Rolv Skjærven
- Department of Global Public Health and Primary Care, University of Bergen, and Medical Birth Registry of Norway, Bergen, Norway and
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Abstract
This study aimed to assess intrinsic reliabilities of devices for pulse wave measurement (PWM). An artificial pulse generator system was constructed to create a periodic pulse wave. The stability of the periodic output was tested by the DP103 pressure transducer. The pulse generator system was then used to evaluate the TD01C system. Test-re-test and inter-device reliability assessments were conducted on the TD01C system. First, 11 harmonic components of the pulse wave were calculated using Fourier series analysis. For each harmonic component, coefficient of variation (CV), intra-class correlation coefficient (ICC) and Bland-Altman plot were used to determine the degree of reliability of the TD01C system. In addition, device exclusion criteria were pre-specified to improve consistency of devices. The artificial pulse generator system was stable to evaluate intrinsic reliabilities of devices for PWM (ICCs > 0.95, p < 0.001). TD01C was reliable for repeated measurements (ICCs of test-re-test reliability > 0.95, p < 0.001; CVs all < 3%). Device exclusion criteria successfully excluded the device with defect; therefore, the criteria reduced inter-device CVs of harmonics and improved consistency of the selected devices for all harmonic components. This study confirmed the feasibility of intrinsic reliability assessment of devices for PWM using an artificial pulse generator system. Moreover, potential novel findings on the assessment combined with device exclusion criteria could be a useful method to select the measuring devices and to evaluate the qualities of them in PWM.
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Affiliation(s)
- Chi-Wei Chang
- Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University , Taipei, Taiwan , ROC and
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Schenk T, Schroeder U, Pešić M, Popovici M, Pershin YV, Mikolajick T. Electric field cycling behavior of ferroelectric hafnium oxide. ACS Appl Mater Interfaces 2014; 6:19744-19751. [PMID: 25365475 DOI: 10.1021/am504837r] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
HfO2 based ferroelectrics are lead-free, simple binary oxides with nonperovskite structure and low permittivity. They just recently started attracting attention of theoretical groups in the fields of ferroelectric memories and electrostatic supercapacitors. A modified approach of harmonic analysis is introduced for temperature-dependent studies of the field cycling behavior and the underlying defect mechanisms. Activation energies for wake-up and fatigue are extracted. Notably, all values are about 100 meV, which is 1 order of magnitude lower than for conventional ferroelectrics like lead zirconate titanate (PZT). This difference is mainly atttributed to the one to two orders of magnitude higher electric fields used for cycling and to the different surface to volume ratios between the 10 nm thin films in this study and the bulk samples of former measurements or simulations. Moreover, a new, analog-like split-up effect of switching peaks by field cycling is discovered and is explained by a network model based on memcapacitive behavior as a result of defect redistribution.
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Affiliation(s)
- Tony Schenk
- NaMLab gGmbH, Noethnitzer Str. 64, D-01187 Dresden, Germany
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Çetingül HE, Wright MJ, Thompson PM, Vidal R. Segmentation of high angular resolution diffusion MRI using sparse riemannian manifold clustering. IEEE Trans Med Imaging 2014; 33:301-317. [PMID: 24108748 PMCID: PMC4293082 DOI: 10.1109/tmi.2013.2284360] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
We address the problem of segmenting high angular resolution diffusion imaging (HARDI) data into multiple regions (or fiber tracts) with distinct diffusion properties. We use the orientation distribution function (ODF) to model diffusion and cast the ODF segmentation problem as a clustering problem in the space of ODFs. Our approach integrates tools from sparse representation theory and Riemannian geometry into a graph theoretic segmentation framework. By exploiting the Riemannian properties of the space of ODFs, we learn a sparse representation for each ODF and infer the segmentation by applying spectral clustering to a similarity matrix built from these representations. In cases where regions with similar (resp. distinct) diffusion properties belong to different (resp. same) fiber tracts, we obtain the segmentation by incorporating spatial and user-specified pairwise relationships into the formulation. Experiments on synthetic data evaluate the sensitivity of our method to image noise and to the concentration parameters, and show its superior performance compared to alternative methods when analyzing complex fiber configurations. Experiments on phantom and real data demonstrate the accuracy of the proposed method in segmenting simulated fibers and white matter fiber tracts of clinical importance.
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Affiliation(s)
- H. Ertan Çetingül
- Imaging and Computer Vision Technology Field, Siemens Corporation, Corporate Technology, Princeton, NJ 08540, USA. ()
| | - Margaret J. Wright
- Queensland Institute of Medical Research and with the School of Psychology, The University of Queensland, Brisbane 4072, Queensland, Australia ()
| | - Paul M. Thompson
- Laboratory of Neuro Imaging, Department of Neurology, University of California-Los Angeles (UCLA) School of Medicine, Los Angeles, CA 90095, USA ()
| | - René Vidal
- Department of Biomedical Engineering, The Johns Hopkins University, Baltimore, MD 21218, USA ()
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Abstract
BACKGROUND The objective of this article was to focus on the application of harmonic decomposition to continuous glucose monitor (CGM) measurements. We show evidence of an attenuation of fast variations of interstitial glucose when compared to blood in type 1 diabetes mellitus (T1DM) and, using information theory, propose optimal sampling schedules associated with the use and study of CGMs. METHOD Using a cohort of 26 T1DM subjects, wearing two Navigator sensors for 1 to 3 days, we analyzed the frequency content of each glucose signal and derived across subject frequency cutoffs using discrete Fourier transform and common signal processing techniques. RESULTS We observed a significant difference in the frequency content of blood glucose compared to interstitial glucose in T1DM, providing evidence toward the existence of a diffusion process between blood and interstitial glucose, acting as a low-pass filter. Furthermore, we obtained a 15-minutes sampling schedule for optimal comparison of CGM values to blood reference. CONCLUSION Blood glucose and interstitial glucose have different dynamics, as shown by harmonic analysis, and these differences have consequences on advisable schedules for accuracy studies of CGMS.
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Affiliation(s)
- Marc D Breton
- University of Virginia Diabetes Technology Center, UVa Health System, Charlottesville, Virginia 22908-4888, USA.
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