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Fan Z, Li GQ, Long GL. Tuning the Quantum Properties of ZnO Devices by Modulating Bulk Length and Doping. Entropy (Basel) 2022; 24:1750. [PMID: 36554155 PMCID: PMC9777800 DOI: 10.3390/e24121750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 11/24/2022] [Accepted: 11/24/2022] [Indexed: 06/17/2023]
Abstract
The quantum transport properties of ZnO devices with five different bulk configurations are investigated with numerical methods. The calculation results reveal that the transport property at a higher energy range can be tuned by changing the length of central scattering. By substituting some Zn atoms with Cu atoms, it is found that the doped Cu atoms have an obvious effect on the quantum properties at the entire energy range investigated, and could result in different transmission. The properties of ZnO devices are also influenced by the doping positions of Cu atoms. The tuning mechanism relies on the shifting of carrier distributions in the scattering center of the device.
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Affiliation(s)
- Zheng Fan
- State Key Laboratory of Low-Dimensional Quantum Physics and Department of Physics, Tsinghua University, Beijing 100084, China
| | - Gui-Qin Li
- State Key Laboratory of Low-Dimensional Quantum Physics and Department of Physics, Tsinghua University, Beijing 100084, China
- Frontier Science Center for Quantum Information, Beijing 100084, China
| | - Gui-Lu Long
- State Key Laboratory of Low-Dimensional Quantum Physics and Department of Physics, Tsinghua University, Beijing 100084, China
- Frontier Science Center for Quantum Information, Beijing 100084, China
- Beijing Academy of Quantum Information Sciences, Beijing 100193, China
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2
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Liu J, Luo K, Chang H, Sun B, Wu Z. Ultrahigh Spin Filter Efficiency, Giant Magnetoresistance and Large Spin Seebeck Coefficient in Monolayer and Bilayer Co-/Fe-/Cu-Phthalocyanine Molecular Devices. Nanomaterials (Basel) 2021; 11:2713. [PMID: 34685159 PMCID: PMC8538559 DOI: 10.3390/nano11102713] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2021] [Revised: 10/09/2021] [Accepted: 10/11/2021] [Indexed: 11/16/2022]
Abstract
The spin related electrical and thermoelectric properties of monolayer and bilayer MPc (M = Co, Fe, Cu) molecular devices in a parallel spin configuration (PC) and an anti-parallel spin configuration (APC) between the V-shaped zigzag-edged graphene nanoribbon electrodes and the center bilayer MPc molecules are investigated by combining the density functional theory and non-equilibrium Green's function approaches. The results show that there is an ultrahigh spin filter efficiency exceeding 99.99995% and an ultra-large total conductance of 0.49996G0 for FePc-CoPc molecular devices in the PC and a nearly pure charge current at high temperature in the APC and a giant MR ratio exceeding 9.87 × 106% at a zero bias. In addition, there are pure spin currents for CuPc and FePc molecular devices in the PC, and an almost pure spin current for FePc molecular devices in the APC at some temperature. Meanwhile, there is a high SFE of about 99.99585% in the PC and a reserved SFE of about -19.533% in the APC and a maximum MR ratio of about 3.69 × 108% for the FePc molecular device. Our results predict that the monolayer and bilayer MPc (M = Co, Fe, Cu) molecular devices possess large advantages in designing high-performance electrical and spintronic molecular devices.
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Affiliation(s)
- Jianhua Liu
- Institute of Microelectronics of Chinese Academy of Sciences, Beijing 100029, China
- College of Microelectronics, University of Chinese Academy of Sciences, Beijing 100029, China
| | - Kun Luo
- Institute of Microelectronics of Chinese Academy of Sciences, Beijing 100029, China
- College of Microelectronics, University of Chinese Academy of Sciences, Beijing 100029, China
| | - Hudong Chang
- Institute of Microelectronics of Chinese Academy of Sciences, Beijing 100029, China
- College of Microelectronics, University of Chinese Academy of Sciences, Beijing 100029, China
| | - Bing Sun
- Institute of Microelectronics of Chinese Academy of Sciences, Beijing 100029, China
- College of Microelectronics, University of Chinese Academy of Sciences, Beijing 100029, China
| | - Zhenhua Wu
- Institute of Microelectronics of Chinese Academy of Sciences, Beijing 100029, China
- College of Microelectronics, University of Chinese Academy of Sciences, Beijing 100029, China
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3
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Goswami R, Das S, Seal N, Pathak B, Neogi S. High-Performance Water Harvester Framework for Triphasic and Synchronous Detection of Assorted Organotoxins with Site-Memory-Reliant Security Encryption via pH-Triggered Fluoroswitching. ACS Appl Mater Interfaces 2021; 13:34012-34026. [PMID: 34255471 DOI: 10.1021/acsami.1c05088] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Atmospheric water harvesting, triphasic detection of water contaminants, and advanced antiforgery measures are among important global agendas, where metal-organic frameworks (MOFs), as an incipient class of multifaceted materials, can affect substantial development of individual properties at the interface of tailor-made fabrication. The chemically robust and microporous MOF, encompassing contrasting pore functionalization, exhibits an S-shaped water adsorption curve at 300 K with a steep pore-filling step near P/P0 = 0.5 and shows reversible uptake-release performance. Density functional theory (DFT) studies provide atomistic-level snapshots of sequential insertion of H2O molecules inside the porous channels and also portray H-bonding interactions with polar functional sites in the two-fold interpenetrated structure. The highly emissive attribute with an electron-pull system benefits the fast-responsive framework and highly regenerable detection of four classes of organic pollutants (2,4,6-trinitrophenol (TNP), dichloran, aniline, and nicotine) in water at a record-low sensitivity. In addition to solid-, liquid-, and vapor-phase sensing, host-guest-mediated reversible fluoroswitching is validated through repetitive paper-strip monitoring and image-based detection of food sample contamination. Structure-property synergism in the electron transfer route of sensing is justified from DFT calculations that describe the reshuffling of molecular orbital energy levels in an electron-rich network by each organotoxin, besides evidencing framework-analyte supramolecular interactions. The MOF further delineates the pH-responsive luminescence defect repair via site-specific emission modulation, wherein reversibly alternated "encrypted and decrypted" states are utilized as highly reusable anticounterfeiting labels over multiple platforms and conceptualized as artificial molecular switches. Aiming at self-calibrated, advanced security claims, a NOR-OR coupled logic gate is devised based on commensurate fluorescence-cum-real-time synchronous detection of organic and inorganic (HCl and NH3) pollutants.
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Affiliation(s)
- Ranadip Goswami
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
- Inorganic Materials & Catalysis Division, CSIR-Central Salt & Marine Chemicals Research Institute, Bhavnagar, Gujarat 364002, India
| | - Sandeep Das
- Discipline of Chemistry, Indian Institute of Technology (IIT) Indore, Indore, Madhya Pradesh 453552, India
| | - Nilanjan Seal
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
- Inorganic Materials & Catalysis Division, CSIR-Central Salt & Marine Chemicals Research Institute, Bhavnagar, Gujarat 364002, India
| | - Biswarup Pathak
- Discipline of Chemistry, Indian Institute of Technology (IIT) Indore, Indore, Madhya Pradesh 453552, India
| | - Subhadip Neogi
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
- Inorganic Materials & Catalysis Division, CSIR-Central Salt & Marine Chemicals Research Institute, Bhavnagar, Gujarat 364002, India
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Oh S, Crommie MF, Cohen ML. Simulating the Nanomechanical Response of Cyclooctatetraene Molecules on a Graphene Device. ACS Nano 2019; 13:1713-1718. [PMID: 30702863 DOI: 10.1021/acsnano.8b07781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
We investigate the atomic and electronic structures of cyclooctatetraene (COT) molecules on graphene and analyze their dependence on external gate voltage using first-principles calculations. The external gate voltage is simulated by adding or removing electrons using density functional theory calculations. This allows us to investigate how changes in carrier density modify the molecular shape, orientation, adsorption site, diffusion barrier, and diffusion path. For increased hole doping, COT molecules gradually change their shape to a more flattened conformation and the distance between the molecules and graphene increases while the diffusion barrier drastically decreases. For increased electron doping, an abrupt transition to a planar conformation at a carrier density of -8 × 1013 e/cm2 is observed. These calculations imply that the shape and mobility of adsorbed COT molecules can be controlled by externally gating graphene devices.
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Affiliation(s)
- Sehoon Oh
- Department of Physics , University of California at Berkeley , Berkeley , California 94720 , United States
- Materials Sciences Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
| | - Michael F Crommie
- Department of Physics , University of California at Berkeley , Berkeley , California 94720 , United States
- Materials Sciences Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
- Kavli Energy Nano Sciences Institute at the University of California Berkeley and the Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
| | - Marvin L Cohen
- Department of Physics , University of California at Berkeley , Berkeley , California 94720 , United States
- Materials Sciences Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
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Ferreira Q, Delfino CL, Morgado J, Alcácer L. Bottom-Up Self-Assembled Supramolecular Structures Built by STM at the Solid/Liquid Interface. Materials (Basel) 2019; 12:E382. [PMID: 30691079 PMCID: PMC6384807 DOI: 10.3390/ma12030382] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Revised: 01/17/2019] [Accepted: 01/21/2019] [Indexed: 01/21/2023]
Abstract
One of the lines of research on organic devices is focused on their miniaturization to obtain denser and faster electronic circuits. The challenge is to build devices adding atom by atom or molecule by molecule until the desired structures are achieved. To do this job, techniques able to see and manipulate matter at this scale are needed. Scanning tunneling microscopy (STM) has been the selected technique by scientists to develop smart and functional unimolecular devices. This review article compiles the latest developments in this field giving examples of supramolecular systems monitored and fabricated at the molecular scale by bottom-up approaches using STM at the solid/liquid interface.
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Affiliation(s)
- Quirina Ferreira
- Instituto de Telecomunicações, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
| | - Catarina L Delfino
- Instituto de Telecomunicações, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
| | - Jorge Morgado
- Instituto de Telecomunicações, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
- Department of Bioengineering , Instituto Superior Técnico, University of Lisbon, Av.Rovisco Pais, 1049-001 Lisbon, Portugal.
| | - Luís Alcácer
- Instituto de Telecomunicações, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
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Chen F, Bai M, Cao K, Zhao Y, Cao X, Wei J, Wu N, Li J, Wang L, Fan C, Zhao Y. Programming Enzyme-Initiated Autonomous DNAzyme Nanodevices in Living Cells. ACS Nano 2017; 11:11908-11914. [PMID: 29045785 DOI: 10.1021/acsnano.7b06728] [Citation(s) in RCA: 82] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Molecular nanodevices are computational assemblers that switch defined states upon external stimulation. However, interfacing artificial nanodevices with natural molecular machineries in living cells remains a great challenge. Here, we delineate a generic method for programming assembly of enzyme-initiated DNAzyme nanodevices (DzNanos). Two programs including split assembly of two partzymes and toehold exchange displacement assembly of one intact DNAzyme initiated by telomerase are computed. The intact one obtains higher assembly yield and catalytic performance ascribed to proper conformation folding and active misplaced assembly. By employing MnO2 nanosheets as both DNA carriers and source of Mn2+ as DNAzyme cofactor, we find that this DzNano is well assembled via a series of conformational states in living cells and operates autonomously with sustained cleavage activity. Other enzymes can also induce corresponding DzNano assembly with defined programming modules. These DzNanos not only can monitor enzyme catalysis in situ but also will enable the implementation of cellular stages, behaviors, and pathways for basic science, diagnostic, and therapeutic applications as genetic circuits.
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Affiliation(s)
- Feng Chen
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
| | - Min Bai
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
| | - Ke Cao
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
| | - Yue Zhao
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
| | - Xiaowen Cao
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
| | - Jing Wei
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
| | - Na Wu
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
| | - Jiang Li
- Division of Physical Biology & Bioimaging Center, Shanghai Institute of Applied Physics, Chinese Academy of Sciences , Shanghai 201800, P.R. China
| | - Lihua Wang
- Division of Physical Biology & Bioimaging Center, Shanghai Institute of Applied Physics, Chinese Academy of Sciences , Shanghai 201800, P.R. China
| | - Chunhai Fan
- Division of Physical Biology & Bioimaging Center, Shanghai Institute of Applied Physics, Chinese Academy of Sciences , Shanghai 201800, P.R. China
| | - Yongxi Zhao
- Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University , Xianning West Road, Xi'an, Shaanxi 710049, P.R. China
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Ragazzon G, Credi A, Colasson B. Thermodynamic Insights on a Bistable Acid-Base Switchable Molecular Shuttle with Strongly Shifted Co-conformational Equilibria. Chemistry 2017; 23:2149-2156. [PMID: 27918617 DOI: 10.1002/chem.201604783] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2016] [Indexed: 12/31/2022]
Abstract
Bistable [2]rotaxanes in which the affinities of the two stations can be reversed form the basis of molecular shuttles. Gaining quantitative information on such rotaxanes in which the ring distribution between the two stations is largely nonsymmetric has proven to be very challenging. Herein, we report on two independent experimental methodologies, based on luminescence lifetime measurements and acid-base titrations, to determine the relative populations of the two co-conformations of a [2]rotaxane. The assays yield convergent results and are sensitive enough to measure an equilibrium constant (K≈4000) out of reach for NMR spectroscopy. We also estimate the ring distribution constant in the switched (deprotonated) state (K'<10-4 ), and report the highest positional efficiency for stimuli-induced shuttling to date (>99.92 %). Finally, our results show that the pKa of the pH-responsive station depends on the ring affinity of the pH-insensitive station, an observation that paves the way for the design of new artificial allosteric systems.
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Affiliation(s)
- Giulio Ragazzon
- Dipartimento di Chimica "G. Ciamician", Università di Bologna, via Selmi 2, 40126, Bologna, Italy
| | - Alberto Credi
- Dipartimento di Scienze e Tecnologie Agro-alimentari, Università di Bologna, Viale Fanin 44, 40127, Bologna, Italy
| | - Benoit Colasson
- Dipartimento di Chimica "G. Ciamician", Università di Bologna, via Selmi 2, 40126, Bologna, Italy.,Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques (CNRS UMR 8601), Université Paris Descartes Sorbonne Paris Cité, 45 rue des Saints-Pères, 75006, Paris, France
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Bahadoran M, Noorden AFA, Mohajer FS, Abd Mubin MH, Chaudhary K, Jalil MA, Ali J, Yupapin P. Detection of Salmonella bacterium in drinking water using microring resonator. Artif Cells Nanomed Biotechnol 2014; 44:315-21. [PMID: 25133457 DOI: 10.3109/21691401.2014.948549] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
A new microring resonator system is proposed for the detection of the Salmonella bacterium in drinking water, which is made up of SiO2-TiO2 waveguide embedded inside thin film layer of the flagellin. The change in refractive index due to the binding of the Salmonella bacterium with flagellin layer causes a shift in the output signal wavelength and the variation in through and drop port's intensities, which leads to the detection of Salmonella bacterium in drinking water. The sensitivity of proposed sensor for detecting of Salmonella bacterium in water solution is 149 nm/RIU and the limit of detection is 7 × 10(-4)RIU.
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Affiliation(s)
- Mahdi Bahadoran
- a Institue of Advance Photonics Science, Nanotechnology Research Alliance, Universiti Teknologi Malaysia (UTM) , Johor Bahru , Malaysia
| | - Ahmad Fakhrurrazi Ahmad Noorden
- a Institue of Advance Photonics Science, Nanotechnology Research Alliance, Universiti Teknologi Malaysia (UTM) , Johor Bahru , Malaysia
| | - Faeze Sadat Mohajer
- b Bioinformatics Research Group, Universiti Teknologi Malaysia (UTM) , Johor Bahru , Malaysia
| | - Mohamad Helmi Abd Mubin
- a Institue of Advance Photonics Science, Nanotechnology Research Alliance, Universiti Teknologi Malaysia (UTM) , Johor Bahru , Malaysia
| | - Kashif Chaudhary
- a Institue of Advance Photonics Science, Nanotechnology Research Alliance, Universiti Teknologi Malaysia (UTM) , Johor Bahru , Malaysia
| | - Muhammad Arif Jalil
- a Institue of Advance Photonics Science, Nanotechnology Research Alliance, Universiti Teknologi Malaysia (UTM) , Johor Bahru , Malaysia
| | - Jalil Ali
- a Institue of Advance Photonics Science, Nanotechnology Research Alliance, Universiti Teknologi Malaysia (UTM) , Johor Bahru , Malaysia
| | - Preecha Yupapin
- c Advanced Studies Center, Faculty of Science King Mongkut's Institute of Technology Ladkrabang , Bangkok , Thailand
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Mukai M, Sasaki Y, Kikuchi J. Fusion-triggered switching of enzymatic activity on an artificial cell membrane. Sensors (Basel) 2012; 12:5966-77. [PMID: 22778625 DOI: 10.3390/s120505966] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2012] [Revised: 04/13/2012] [Accepted: 05/03/2012] [Indexed: 11/17/2022]
Abstract
A nanosensory membrane device was constructed for detecting liposome fusion through changes in an enzymatic activity. Inspired by a biological signal transduction system, the device design involved functionalized liposomal membranes prepared by self-assembly of the following molecular components: a synthetic peptide lipid and a phospholipid as matrix membrane components, a Schiff's base of pyridoxal 5'-phosphate with phosphatidylethanolamine as a thermo-responsive artificial receptor, NADH-dependent L-lactate dehydrogenase as a signal amplifier, and Cu(2+) ion as a signal mediator between the receptor and enzyme. The enzymatic activity of the membrane device was adjustable by changing the matrix lipid composition, reflecting the thermotropic phase transition behavior of the lipid membranes, which in turn controlled receptor binding affinity toward the enzyme-inhibiting mediator species. When an effective fusogen anionic polymer was added to these cationic liposomes, membrane fusion occurred, and the functionalized liposomal membranes responded with changes in enzymatic activity, thus serving as an effective nanosensory device for liposome fusion detection.
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