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polygenic risk score (prs)

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Khan A, Turchin MC, Patki A, Srinivasasainagendra V, Shang N, Nadukuru R, Jones AC, Malolepsza E, Dikilitas O, Kullo IJ, Schaid DJ, Karlson E, Ge T, Meigs JB, Smoller JW, Lange C, Crosslin DR, Jarvik GP, Bhatraju PK, Hellwege JN, Chandler P, Torvik LR, Fedotov A, Liu C, Kachulis C, Lennon N, Abul-Husn NS, Cho JH, Ionita-Laza I, Gharavi AG, Chung WK, Hripcsak G, Weng C, Nadkarni G, Irvin MR, Tiwari HK, Kenny EE, Limdi NA, Kiryluk K. Genome-wide polygenic score to predict chronic kidney disease across ancestries. Nat Med 2022;28:1412-1420. [PMID: 35710995 PMCID: PMC9329233 DOI: 10.1038/s41591-022-01869-1] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Accepted: 05/11/2022] [Indexed: 01/03/2023]

Affiliation(s)

Atlas Khan Division of Nephrology, Department of Medicine, Vagelos College of Physicians & Surgeons, Columbia University, New York, NY, USA
Michael C Turchin Institute for Genomic Health, Icahn School of Medicine at Mount Sinai, New York, NY, USA
Amit Patki Department of Biostatistics, School of Public Health, University of Alabama at Birmingham, Birmingham, AL, USA
Vinodh Srinivasasainagendra Department of Biostatistics, School of Public Health, University of Alabama at Birmingham, Birmingham, AL, USA
Ning Shang Division of Nephrology, Department of Medicine, Vagelos College of Physicians & Surgeons, Columbia University, New York, NY, USA
Rajiv Nadukuru The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA
Alana C Jones Department of Epidemiology, School of Public Health, University of Alabama at Birmingham, Birmingham, AL, USA
Edyta Malolepsza Broad Institute of MIT and Harvard, Cambridge, MA, USA
Ozan Dikilitas Department of Cardiovascular Diseases, Mayo Clinic, Rochester, MN, USA
Iftikhar J Kullo Department of Cardiovascular Diseases, Mayo Clinic, Rochester, MN, USA
Daniel J Schaid Department of Cardiovascular Diseases, Mayo Clinic, Rochester, MN, USA
Elizabeth Karlson Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA
Tian Ge Department of Psychiatry, Massachusetts General Hospital, Boston, MA, USA
James B Meigs Division of General Internal Medicine, Department of Medicine, Massachusetts General Hospital, Boston, MA, USA Harvard Medical School, Boston, MA, USA Program in Medical and Population Genetics, Broad Institute, Cambridge, MA, USA
Jordan W Smoller Department of Psychiatry, Massachusetts General Hospital, Boston, MA, USA
Christoph Lange Department of Biostatistics, Harvard T. H. Chan School of Public Health, Boston, MA, USA
David R Crosslin Division of Biomedical Informatics and Genomics, John W. Deming Department of Medicine, Tulane University School of Medicine, New Orleans, LA, USA
Gail P Jarvik Departments of Medicine (Medical Genetics) and Genome Sciences, University of Washington, Seattle, WA, USA
Pavan K Bhatraju Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, University of Washington, Seattle, WA, USA
Jacklyn N Hellwege Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA
Paulette Chandler Division of Preventive Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA
Laura Rasmussen Torvik Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA
Alex Fedotov Irving Institute for Clinical and Translational Research, Columbia University, New York, NY, USA
Cong Liu Department of Biomedical Informatics, Vagelos College of Physicians & Surgeons, Columbia University, New York, NY, USA
Christopher Kachulis Broad Institute of MIT and Harvard, Cambridge, MA, USA
Niall Lennon Broad Institute of MIT and Harvard, Cambridge, MA, USA
Noura S Abul-Husn Institute for Genomic Health, Icahn School of Medicine at Mount Sinai, New York, NY, USA Division of Genomic Medicine, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA
Judy H Cho The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA
Iuliana Ionita-Laza Department of Biostatistics, Columbia University, New York, NY, USA
Ali G Gharavi Division of Nephrology, Department of Medicine, Vagelos College of Physicians & Surgeons, Columbia University, New York, NY, USA
Wendy K Chung Department of Pediatrics, Columbia University Irving Medical Center, New York, NY, USA
George Hripcsak Department of Biomedical Informatics, Vagelos College of Physicians & Surgeons, Columbia University, New York, NY, USA
Chunhua Weng Department of Biomedical Informatics, Vagelos College of Physicians & Surgeons, Columbia University, New York, NY, USA
Girish Nadkarni The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA
Marguerite R Irvin Department of Epidemiology, School of Public Health, University of Alabama at Birmingham, Birmingham, AL, USA
Hemant K Tiwari Department of Biostatistics, School of Public Health, University of Alabama at Birmingham, Birmingham, AL, USA
Eimear E Kenny Institute for Genomic Health, Icahn School of Medicine at Mount Sinai, New York, NY, USA Division of Genomic Medicine, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA Division of General Internal Medicine, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA
Nita A Limdi Department of Neurology, School of Medicine, University of Alabama at Birmingham, Birmingham, AL, USA
Krzysztof Kiryluk Division of Nephrology, Department of Medicine, Vagelos College of Physicians & Surgeons, Columbia University, New York, NY, USA.

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Muranen TA, Greco D, Blomqvist C, Aittomäki K, Khan S, Hogervorst F, Verhoef S, Pharoah PD, Dunning AM, Shah M, Luben R, Bojesen SE, Nordestgaard BG, Schoemaker M, Swerdlow A, García-Closas M, Figueroa J, Dörk T, Bogdanova NV, Hall P, Li J, Khusnutdinova E, Bermisheva M, Kristensen V, Borresen-Dale AL, Peto J, dos Santos Silva I, Couch FJ, Olson JE, Hillemans P, Park-Simon TW, Brauch H, Hamann U, Burwinkel B, Marme F, Meindl A, Schmutzler RK, Cox A, Cross SS, Sawyer EJ, Tomlinson I, Lambrechts D, Moisse M, Lindblom A, Margolin S, Hollestelle A, Martens JW, Fasching PA, Beckmann MW, Andrulis IL, Knight JA, Anton-Culver H, Ziogas A, Giles GG, Milne RL, Brenner H, Arndt V, Mannermaa A, Kosma VM, Chang-Claude J, Rudolph A, Devilee P, Seynaeve C, Hopper JL, Southey MC, John EM, Whittemore AS, Bolla MK, Wang Q, Michailidou K, Dennis J, Easton DF, Schmidt MK, Nevanlinna H. Genetic modifiers of CHEK2*1100delC-associated breast cancer risk. Genet Med 2017;19:599-603. [PMID: 27711073 PMCID: PMC5382131 DOI: 10.1038/gim.2016.147] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2016] [Accepted: 07/27/2016] [Indexed: 01/06/2023] Open

Affiliation(s)

Taru A. Muranen Department of Obstetrics and Gynecology, Helsinki University Hospital, University of Helsinki, Helsinki, Finland
Dario Greco Unit of Systems Toxicology, Finnish Institute of Occupational Health, Helsinki, Finland
Carl Blomqvist Department of Oncology, Helsinki University Hospital, University of Helsinki, Helsinki, Finland
Kristiina Aittomäki Department of Clinical Genetics, Helsinki University Hospital, University of Helsinki, Helsinki, Finland
Sofia Khan Department of Obstetrics and Gynecology, Helsinki University Hospital, University of Helsinki, Helsinki, Finland
Frans Hogervorst Netherlands Cancer Institute, Antoni van Leeuwenhoek hospital, Amsterdam, The Netherlands
Senno Verhoef Netherlands Cancer Institute, Antoni van Leeuwenhoek hospital, Amsterdam, The Netherlands
Paul D.P. Pharoah Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK
Alison M. Dunning Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK
Mitul Shah Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK
Robert Luben Clinical Gerontology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK
Stig E. Bojesen Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark Copenhagen General Population Study, Herlev Hospital, Copenhagen University Hospital, Herlev, Denmark Department of Clinical Biochemistry, Herlev Hospital, Copenhagen University Hospital, Herlev, Denmark
Børge G. Nordestgaard Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark Copenhagen General Population Study, Herlev Hospital, Copenhagen University Hospital, Herlev, Denmark Department of Clinical Biochemistry, Herlev Hospital, Copenhagen University Hospital, Herlev, Denmark
Minouk Schoemaker Division of Genetics and Epidemiology, The Institute of Cancer Research, London, UK
Anthony Swerdlow Division of Genetics and Epidemiology, The Institute of Cancer Research, London, UK Division of Breast Cancer Research, The Institute of Cancer Research, London, UK
Montserrat García-Closas Division of Genetics and Epidemiology, The Institute of Cancer Research, London, UK Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, USA
Jonine Figueroa Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, USA
Thilo Dörk Gynaecology Research Unit, Hannover Medical School, Hannover, Germany
Natalia V. Bogdanova Department of Radiation Oncology, Hannover Medical School, Hannover, Germany
Per Hall Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
Jingmei Li Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
Elza Khusnutdinova Department of Genetics and Fundamental Medicine, Bashkir State University, Ufa, Russia Institute of Biochemistry and Genetics, Ufa Scientific Center of Russian Academy of Sciences, Ufa, Russia
Marina Bermisheva Gynaecology Research Unit, Hannover Medical School, Hannover, Germany Institute of Biochemistry and Genetics, Ufa Scientific Center of Russian Academy of Sciences, Ufa, Russia
Vessela Kristensen Department of Genetics, Institute for Cancer Research, Radiumhospitalet, Oslo University Hospital, University of Oslo, Oslo, Norway Department of Clinical Molecular Biology, Oslo University Hospital, University of Oslo, Oslo, Norway K.G. Jebsen Center for Breast Cancer Research, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Oslo, Norway
Anne-Lise Borresen-Dale Department of Genetics, Institute for Cancer Research, Radiumhospitalet, Oslo University Hospital, University of Oslo, Oslo, Norway K.G. Jebsen Center for Breast Cancer Research, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Oslo, Norway
NBCS Investigators Department of Genetics, Institute for Cancer Research, Radiumhospitalet, Oslo University Hospital, University of Oslo, Oslo, Norway Department of Oncology, Radiumhospitalet, Oslo University Hospital, University of Oslo, Oslo, Norway Department of Radiology, Radiumhospitalet, Oslo University Hospital, University of Oslo, Oslo, Norway National Resource Centre for Long-term Studies after Cancer, Cancer Clinic, Radiumhospitalet, Oslo University Hospital, University of Oslo, Oslo, Norway Department of Clinical Molecular Biology, Oslo University Hospital, University of Oslo, Oslo, Norway K.G. Jebsen Center for Breast Cancer Research, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Oslo, Norway Department of Breast and Endocrine Surgery, Institute for Clinical Medicine, Ullevaal University Hospital, University of Oslo, Oslo, Norway Department of Clinical Molecular Biology, Institute of Clinical Medicine, Akershus University Hospital, University of Oslo, Oslo, Norway Department of Oncology, Ullevaal University Hospital, University of Oslo, Oslo, Norway Department of Pathology, Akershus University Hospital, Lørenskog, Norway Department of Surgery, Akershus University Hospital, Lørenskog, Norway Department of Oncology, Haukeland University Hospital, Bergen, Norway Section of Oncology, Institute of Medicine, University of Bergen, Bergen, Norway Norwegian Centre for Integrated Care and Telemedicine, University Hospital of North Norway, Tromsø, Norway Department of Community Medicine, Faculty of Health Sciences, University of Tromsø - The Arctic University of Norway, Tromsø, Norway
Julian Peto Department of Non-Communicable Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, UK
Isabel dos Santos Silva Department of Non-Communicable Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, UK
Fergus J. Couch Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA
Janet E. Olson Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA
Peter Hillemans Gynaecology Research Unit, Hannover Medical School, Hannover, Germany
Tjoung-Won Park-Simon Gynaecology Research Unit, Hannover Medical School, Hannover, Germany
Hiltrud Brauch German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany Dr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology, Stuttgart, Germany University of Tübingen, Tübingen, Germany
Ute Hamann Molecular Genetics of Breast Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany
Barbara Burwinkel Molecular Epidemiology Group, German Cancer Research Center (DKFZ), Heidelberg, Germany Department of Obstetrics and Gynecology, University of Heidelberg, Heidelberg, Germany
Frederik Marme Department of Obstetrics and Gynecology, University of Heidelberg, Heidelberg, Germany National Center for Tumor Diseases, University of Heidelberg, Heidelberg, Germany
Alfons Meindl Division of Gynaecology and Obstetrics, Technische Universität München, Munich, Germany
Rita K. Schmutzler Center for Molecular Medicine Cologne (CMMC), University of Cologne, Cologne, Germany Center for Hereditary Breast and Ovarian Cancer, University Hospital of Cologne, Cologne, Germany Center for Integrated Oncology (CIO), University Hospital of Cologne, Cologne, Germany
Angela Cox Sheffield Cancer Research, Department of Oncology, University of Sheffield, Sheffield, UK
Simon S. Cross Academic Unit of Pathology, Department of Neuroscience, University of Sheffield, Sheffield, UK
Elinor J. Sawyer Research Oncology, Guy’s Hospital, King's College London, London, UK
Ian Tomlinson Wellcome Trust Centre for Human Genetics and Oxford NIHR Biomedical Research Centre, University of Oxford, Oxford, UK
Diether Lambrechts Laboratory for Translational Genetics, Department of Oncology, University of Leuven, Leuven, Belgium Vesalius Research Center, VIB, Leuven, Belgium
Matthieu Moisse Laboratory for Translational Genetics, Department of Oncology, University of Leuven, Leuven, Belgium
Annika Lindblom Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden
Sara Margolin Department of Oncology - Pathology, Karolinska Institutet, Stockholm, Sweden
Antoinette Hollestelle Department of Medical Oncology, Family Cancer Clinic, Erasmus MC Cancer Institute, Rotterdam, The Netherlands
John W.M. Martens Department of Medical Oncology, Family Cancer Clinic, Erasmus MC Cancer Institute, Rotterdam, The Netherlands
Peter A. Fasching Department of Gynaecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander University Erlangen-Nuremberg, Comprehensive Cancer Center Erlangen-EMN, Erlangen, Germany David Geffen School of Medicine, Department of Medicine Division of Hematology and Oncology, University of California at Los Angeles, Los Angeles, CA, USA
Matthias W. Beckmann Department of Gynaecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander University Erlangen-Nuremberg, Comprehensive Cancer Center Erlangen-EMN, Erlangen, Germany
Irene L. Andrulis Department of Molecular Genetics, University of Toronto, Toronto, Canada Lunenfeld-Tanenbaum Research Institute of Mount Sinai Hospital, Toronto, Canada
Julia A. Knight Division of Epidemiology, Dalla Lana School of Public Health, University of Toronto, Toronto, Canada Prosserman Centre for Health Research, Lunenfeld-Tanenbaum Research Institute of Mount Sinai Hospital, Toronto, Canada
kConFab/AOCS Investigators Peter MacCallum Cancer Center, The University of Melbourne, Melbourne, Australia
Hoda Anton-Culver Department of Epidemiology, University of California Irvine, Irvine, CA, USA
Argyrios Ziogas Department of Epidemiology, University of California Irvine, Irvine, CA, USA
Graham G. Giles Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global health, The University of Melbourne, Melbourne, Australia Cancer Epidemiology Centre, Cancer Council Victoria, Melbourne, Australia
Roger L. Milne Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global health, The University of Melbourne, Melbourne, Australia Cancer Epidemiology Centre, Cancer Council Victoria, Melbourne, Australia
Hermann Brenner German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany Division of Preventive Oncology, German Cancer Research Center (DKFZ), Heidelberg, Germany Division of Clinical Epidemiology and Aging Research, German Cancer Research Center (DKFZ), Heidelberg, Germany
Volker Arndt Division of Clinical Epidemiology and Aging Research, German Cancer Research Center (DKFZ), Heidelberg, Germany
Arto Mannermaa Institute of Clinical Medicine, Pathology and Forensic Medicine, University of Eastern Finland, Kuopio, Finland Cancer Center, Department of Clinical Pathology, Kuopio University Hospital, Kuopio, Finland Imaging Center, Department of Clinical Pathology, Kuopio University Hospital, Kuopio, Finland
Veli-Matti Kosma Institute of Clinical Medicine, Pathology and Forensic Medicine, University of Eastern Finland, Kuopio, Finland Cancer Center, Department of Clinical Pathology, Kuopio University Hospital, Kuopio, Finland Imaging Center, Department of Clinical Pathology, Kuopio University Hospital, Kuopio, Finland
Jenny Chang-Claude Division of Cancer Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany
Anja Rudolph Division of Cancer Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany
Peter Devilee Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands Department of Pathology, Leiden University Medical Center, Leiden, The Netherlands
Caroline Seynaeve Department of Medical Oncology, Family Cancer Clinic, Erasmus MC Cancer Institute, Rotterdam, The Netherlands
John L. Hopper Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global health, The University of Melbourne, Melbourne, Australia
Melissa C. Southey Genetic Epidemiology Laboratory, Department of Pathology, The University of Melbourne, Melbourne, Australia
Esther M. John Department of Epidemiology, Cancer Prevention Institute of California, Fremont, CA, USA Department of Health Research and Policy - Epidemiology, Stanford University School of Medicine, Stanford, CA, USA Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA, USA
Alice S. Whittemore Department of Health Research and Policy - Epidemiology, Stanford University School of Medicine, Stanford, CA, USA Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA, USA
Manjeet K. Bolla Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK
Qin Wang Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK
Kyriaki Michailidou Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK Department of Electron Microscopy/Molecular Pathology, The Cyprus Institute of Neurology and Genetics, Nicosia, Cyprus
Joe Dennis Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK
Douglas F. Easton Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK
Marjanka K. Schmidt Netherlands Cancer Institute, Antoni van Leeuwenhoek hospital, Amsterdam, The Netherlands
Heli Nevanlinna Department of Obstetrics and Gynecology, Helsinki University Hospital, University of Helsinki, Helsinki, Finland

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