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Gil P, Exbrayat A, Loire E, Rakotoarivony I, Charriat F, Morel C, Baldet T, Boisseau M, Marie A, Frances B, L’Ambert G, Bessat M, Otify Y, Goffredo M, Mancini G, Busquets N, Birnberg L, Talavera S, Aranda C, Ayari E, Mejri S, Sghaier S, Bennouna A, El Rhaffouli H, Balenghien T, Chlyeh G, Fassi Fihri O, Reveillaud J, Simonin Y, Eloit M, Gutierrez S. Spatial scale influences the distribution of viral diversity in the eukaryotic virome of the mosquito Culex pipiens. Virus Evol 2023; 9:vead054. [PMID: 37719779 PMCID: PMC10504824 DOI: 10.1093/ve/vead054] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Revised: 06/22/2023] [Accepted: 08/23/2023] [Indexed: 09/19/2023] Open
Abstract
Our knowledge of the diversity of eukaryotic viruses has recently undergone a massive expansion. This diversity could influence host physiology through yet unknown phenomena of potential interest to the fields of health and food production. However, the assembly processes of this diversity remain elusive in the eukaryotic viromes of terrestrial animals. This situation hinders hypothesis-driven tests of virome influence on host physiology. Here, we compare taxonomic diversity between different spatial scales in the eukaryotic virome of the mosquito Culex pipiens. This mosquito is a vector of human pathogens worldwide. The experimental design involved sampling in five countries in Africa and Europe around the Mediterranean Sea and large mosquito numbers to ensure a thorough exploration of virus diversity. A group of viruses was found in all countries. This core group represented a relatively large and diverse fraction of the virome. However, certain core viruses were not shared by all host individuals in a given country, and their infection rates fluctuated between countries and years. Moreover, the distribution of coinfections in individual mosquitoes suggested random co-occurrence of those core viruses. Our results also suggested differences in viromes depending on geography, with viromes tending to cluster depending on the continent. Thus, our results unveil that the overlap in taxonomic diversity can decrease with spatial scale in the eukaryotic virome of C. pipiens. Furthermore, our results show that integrating contrasted spatial scales allows us to identify assembly patterns in the mosquito virome. Such patterns can guide future studies of virome influence on mosquito physiology.
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Affiliation(s)
- Patricia Gil
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Antoni Exbrayat
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Etienne Loire
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Ignace Rakotoarivony
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Florian Charriat
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Côme Morel
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Thierry Baldet
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Michel Boisseau
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | | | | | | | - Mohamed Bessat
- Department of Parasitology, Faculty of Veterinary Medicine, Alexandria University, Alexandria 5410012, Egypt
| | - Yehia Otify
- Department of Parasitology, Faculty of Veterinary Medicine, Alexandria University, Alexandria 5410012, Egypt
| | - Maria Goffredo
- Istituto Zooprofilattico Sperimentale dell’Abruzzo e del Molise ‘G. Caporale’, Teramo 64100, Italy
| | - Giuseppe Mancini
- Istituto Zooprofilattico Sperimentale dell’Abruzzo e del Molise ‘G. Caporale’, Teramo 64100, Italy
| | - Núria Busquets
- IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain
| | - Lotty Birnberg
- IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain
| | - Sandra Talavera
- IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain
| | - Carles Aranda
- IRTA. Programa de Sanitat Animal. Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra 08193, Spain
- Servei de Control de Mosquits del Consell Comarcal del Baix Llobregat, Barcelona 08980, Spain
| | - Emna Ayari
- Institut de la Recherche Vétérinaire de Tunisie - Université Tunis El Manar, Tunis 1068, Tunisia
| | - Selma Mejri
- Institut de la Recherche Vétérinaire de Tunisie - Université Tunis El Manar, Tunis 1068, Tunisia
| | - Soufien Sghaier
- Institut de la Recherche Vétérinaire de Tunisie - Université Tunis El Manar, Tunis 1068, Tunisia
| | - Amal Bennouna
- Department of Animal Pathology and Public Health, Hassan II Agronomy & Veterinary Institute, Rabat BP 6202, Morocco
| | | | - Thomas Balenghien
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
- Department of Animal Pathology and Public Health, Hassan II Agronomy & Veterinary Institute, Rabat BP 6202, Morocco
| | - Ghita Chlyeh
- Département de Production, Protection et Biotechnologies Végétales, Unité de Zoologie, Institute of Agronomy and Veterinary Medicine Hassan II, Rabat BP 6202, Morocco
| | - Ouafaa Fassi Fihri
- Department of Animal Pathology and Public Health, Hassan II Agronomy & Veterinary Institute, Rabat BP 6202, Morocco
| | - Julie Reveillaud
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
| | - Yannick Simonin
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
- Pathogenesis and Control of Chronic Infections, University of Montpellier, INSERM, EFS, Montpellier 34394, France
| | - Marc Eloit
- Institut Pasteur, Université Paris Cité, Pathogen Discovery Laboratory, Paris 75015, France
- Institut Pasteur, The OIE Collaborating Centre for Detection and Identification in Humans of Emerging Animal Pathogens, Paris 75724, France
- École nationale vétérinaire d’Alfort, Maisons-Alfort 94700, France
| | - Serafin Gutierrez
- ASTRE, CIRAD, INRAE, University of Montpellier, Montpellier, Languedoc-Roussillon 34398, France
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Michaelakis A, Balestrino F, Becker N, Bellini R, Caputo B, della Torre A, Figuerola J, L’Ambert G, Petric D, Robert V, Roiz D, Saratsis A, Sousa CA, Wint WGR, Papadopoulos NT. A Case for Systematic Quality Management in Mosquito Control Programmes in Europe. Int J Environ Res Public Health 2021; 18:ijerph18073478. [PMID: 33801616 PMCID: PMC8037277 DOI: 10.3390/ijerph18073478] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/07/2021] [Revised: 03/22/2021] [Accepted: 03/24/2021] [Indexed: 01/23/2023]
Abstract
The recent spread of invasive mosquito species, such as Aedes albopictus and the seasonal sporadic transmission of autochthonous cases of arboviral diseases (e.g., dengue, chikungunya, Zika) in temperate areas, such as Europe and North America, highlight the importance of effective mosquito-control interventions to reduce not only nuisance, but also major threats for public health. Local, regional, and even national mosquito control programs have been established in many countries and are executed on a seasonal basis by either public or private bodies. In order for these interventions to be worthwhile, funding authorities should ensure that mosquito control is (a) planned by competent scientific institutions addressing the local demands, (b) executed following the plan that is based on recommended and effective methods and strategies, (c) monitored regularly by checking the efficacy of the implemented actions, (d) evaluated against the set of targets, and (e) regularly improved according to the results of the monitoring. Adherence to these conditions can only be assured if a formal quality management system is adopted and enforced that ensures the transparency of effectiveness of the control operation. The current paper aims at defining the two components of this quality management system, quality assurance and quality control for mosquito control programs with special emphasis on Europe, but applicable over temperate areas.
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Affiliation(s)
- Antonios Michaelakis
- Scientific Directorate of Entomology and Agricultural Zoology, Benaki Phytopathological Institute, 14561 Kifissia, Greece;
| | - Fabrizio Balestrino
- Centro Agricoltura Ambiente “G. Nicoli”, 40014 Crevalcore, Italy; (F.B.); (R.B.)
| | - Norbert Becker
- German Mosquito Control Association (KABS), 67346 Speyer, Germany;
| | - Romeo Bellini
- Centro Agricoltura Ambiente “G. Nicoli”, 40014 Crevalcore, Italy; (F.B.); (R.B.)
| | - Beniamino Caputo
- Dipartimento di Sanità Pubblica e Malattie Infettive, Università di Roma “Sapienza”, 00185 Rome, Italy; (B.C.); (A.d.T.)
| | - Alessandra della Torre
- Dipartimento di Sanità Pubblica e Malattie Infettive, Università di Roma “Sapienza”, 00185 Rome, Italy; (B.C.); (A.d.T.)
| | - Jordi Figuerola
- Department of Wetland Ecology, Estación Biológica de Doñana, CSIC, Avenida Américo Vespucio 26, E-41092 Sevilla, Spain;
- CIBER Epidemiología y Salud Pública, 28029 Madrid, Spain
| | - Gregory L’Ambert
- EID Méditerranée, Division Research and Development, 34184 Montpellier, France;
| | - Dusan Petric
- Department of Plant and Environment Protection, Faculty of Agriculture, University of Novi Sad, 21000 Novi Sad, Serbia;
| | - Vincent Robert
- MIVEGEC, University Montpellier, IRD, CNRS, 34090 Montpellier, France; (V.R.); (D.R.)
| | - David Roiz
- MIVEGEC, University Montpellier, IRD, CNRS, 34090 Montpellier, France; (V.R.); (D.R.)
| | - Anastasios Saratsis
- Laboratory of Parasitology, Veterinary Research Institute, Hellenic Agricultural Organisation Demeter, 57001 Thermi, Greece;
| | - Carla A. Sousa
- Global Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, 1349-008 Lisboa, Portugal;
| | - William G. R. Wint
- Environmental Research Group Oxford Ltd., c/o Department of Zoology, South Parks Road, Oxford OX1 3PS, UK;
| | - Nikos T. Papadopoulos
- Laboratory of Entomology and Agricultural Zoology, University of Thessaly, 38446 Volos, Greece
- Correspondence:
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Ramalli L, Grard G, Beck C, Gallian P, L’Ambert G, Desvaux S, Jourdan M, Ortmans C, Paty MC, Franke F. West Nile virus infections in France, July to November 2018. Eur J Public Health 2019. [DOI: 10.1093/eurpub/ckz186.631] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
In July 2018, one autochthonous case of West Nile virus (WNV) infection was identified in Nice, Provence-Alpes-Côte d’Azur (Paca). We investigated to determine the potential place of infection and the extent of viral circulation in the area, in order to guide control and preventive measures. In affected areas, we raised awareness of health professionals on WNV infections, substance of human origin safety relied on nucleic acid testing for WNV and on deferral of blood donors indicating minimum one night of stay in the areas for 28 days. Equine, wild bird and entomologic surveillance activities were reinforced. The human arboviruses national reference laboratory (NRL) retrospectively tested samples from hospitalized individuals from June 1st with meningitis and encephalitis around Nice. We tested negative suspected autochthonous cases of chikungunya and dengue infections notified since July in Paca and presenting WNV compatible symptoms. Measures were adapted along identification of additional cases.
We identified 27 autochthonous cases, with onset of symptoms between July 7th and November 12th: 24 in Paca, 2 in Corsica and 1 in Occitanie. Seven cases presented neuroinvasives symptoms, 18 flu-like symptoms and 2 were asymptomatic. One blood donation and 2 organs tested positive for WNV. The animal NRL identified 13 equine cases (1 in Paca, 5 in Corsica and 7 in Occitanie) and 4 infected raptors with nervous symptoms (3 in Paca and 1 in Corsica). Genomic characterization of the virus identified a strain belonging to the lineage 2 among 2 raptors. No virus was found in mosquitoes captured in affected areas.
Since 2000, six episodes of WNV transmission were reported in France but none with this extent. For the first time, the lineage 2, circulating in Italy and other European countries, was isolated in France which might be changing epidemiological situation. Therefore, surveillance activities should be revised in order to promptly secure blood products.
Key messages
We describe the most important episode of West Nile Virus transmission identified in humans in France. In 2018, West Nile virus lineage 2 was isolated for the first time in France which might change the epidemiological situation in the country.
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Affiliation(s)
- L Ramalli
- Regional Office Paca-Corse, Santé Publique France, Marseille, France
| | - G Grard
- Centre National de Référence des Arbovirus, Institut de Recherche Biomédicale des Armées, Marseille, France
| | - C Beck
- Laboratoire National de Référence West Nile, Agence Nationale de Sécurité Sanitaire, Maisons-Alfort, France
| | - P Gallian
- Etablissement Français du Sang Paca et Corse, Marseille, France
| | - G L’Ambert
- Entente Interdépartementale pour la Démoustication du Littoral Méditerranéen, Montpellier, France
| | - S Desvaux
- Unité Sanitaire de la Faune, Office National de la Chasse et de la Faune Sauvage, Saint Benoist, France
| | - M Jourdan
- Réseau d’épidémio-Surveillance en Pathologie Equine, Saint Contest, France
| | - C Ortmans
- Agence Régionale de Santé Provence-Alpes-Côte d’Azur, Marseille, France
| | - M-C Paty
- Santé Publique France, Saint-Maurice, France
| | - F Franke
- Regional Office Paca-Corse, Santé Publique France, Marseille, France
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4
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Franke F, Giron S, Cochet A, Jeannin C, Leparc-Goffart I, de Valk H, Jourdain F, de Lamballerie X, L’Ambert G, Paty MC. Autochthonous chikungunya and dengue fever outbreak in Mainland France, 2010-2018. Eur J Public Health 2019. [DOI: 10.1093/eurpub/ckz186.628] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Background
Aedes albopictus, vector of dengue and chikungunya viruses, is implanted in mainland France, exposing to the risk of autochthonous transmission. Since 2006, epidemiological and entomological surveillance activities aim to prevent or limit the occurrence of autochthonous cases. We aimed to describe episodes of transmission and control measures implemented in order to reflect on surveillance activities.
Methods
We reviewed all publications and documents produced on autochthonous transmission episodes in France and surveillance protocols. We reviewed surveillance activities, investigation methods and control measures implemented.
Results
Between 2010 and 2018, eight episodes of autochthonous dengue fever transmission and three of chikungunya were recorded in mainland France. All of them occurred in the South east of France, between July and October, when vector density was the highest. Transmission areas were limited to single domestic houses located in discontinuous urban areas. Only two episodes happened in two distinct areas. Chikungunya episodes led to 31 cases and dengue fever episodes to 23 cases. Most cases were identified by door-to-door investigations set-up in transmission areas. We isolated serotypes 1 and 2 for dengue and East Central South Africa lineage for chikungunya in autochthonous cases. Adulticide vector control measures were effective in controlling transmission.
Seven episodes of transmission were due to failure in identifying primary imported cases. Four episodes occurred because of the absence or the lack of vector controls measures around primary imported cases.
Conclusions
Surveillance activities, and autochthonous cases investigations, were effective in limiting the extent of transmission, but were highly demanding for surveillance actors. Identified causes of transmission highlight the need of regular awareness campaigns targeting physicians and biologists.
Key messages
Effectiveness of the surveillance system of dengue, chikungunya and zika viruses, and autochthonous cases investigations. Needs of awareness and training courses targeting health professionals to the risk represented by these viruses.
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Affiliation(s)
- F Franke
- Paca-Corse Regional Office, Santé Publique France, Marseille, France
| | - S Giron
- Paca-Corse Regional Office, Santé Publique France, Marseille, France
| | - A Cochet
- Occitanie Regional Office, Santé Publique France, Montpellier, France
| | - C Jeannin
- Entente Interdépartementale pour la Démoustication du Littoral Méditerranéen, Montpellier, France
| | - I Leparc-Goffart
- Centre National de Référence des Arbovirus, Institut de Recherche Biomédicale des Armées, Marseille, France
| | - H de Valk
- Santé Publique France, Saint-Maurice, France
| | - F Jourdain
- Santé Publique France, Saint-Maurice, France
| | - X de Lamballerie
- UMR Émergence des Pathologies Virales (UMR EPV), Université d’Aix-Marseille, IRD 190, Inserm 1207, EHESP, IHU Méditerranée Infection, Marseille, France
| | - G L’Ambert
- Entente Interdépartementale pour la Démoustication du Littoral Méditerranéen, Montpellier, France
| | - M C Paty
- Santé Publique France, Saint-Maurice, France
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5
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Delisle E, Rousseau C, Broche B, Leparc-Goffart I, L’Ambert G, Cochet A, Prat C, Foulongne V, Ferré JB, Catelinois O, Flusin O, Tchernonog E, Moussion IE, Wiegandt A, Septfons A, Mendy A, Moyano MB, Laporte L, Maurel J, Jourdain F, Reynes J, Paty MC, Golliot F. Chikungunya outbreak in Montpellier, France, September to October 2014. Euro Surveill 2015; 20. [DOI: 10.2807/1560-7917.es2015.20.17.21108] [Citation(s) in RCA: 201] [Impact Index Per Article: 22.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023] Open
Abstract
In October 2014, an outbreak of 12 autochthonous chikungunya cases, 11 confirmed and 1 probable, was detected in a district of Montpellier, a town in the south of France colonised by the vector Aedes albopictus since 2010. A case returning from Cameroon living in the affected district was identified as the primary case. The epidemiological investigations and the repeated vector control treatments performed in the area and around places frequented by cases helped to contain the outbreak. In 2014, the chikungunya and dengue surveillance system in mainland France was challenged by numerous imported cases due to the chikungunya epidemic ongoing in the Caribbean Islands. This first significant outbreak of chikungunya in Europe since the 2007 Italian epidemic, however, was due to an East Central South African (ECSA) strain, imported by a traveller returning from West Africa. Important lessons were learned from this episode, which reminds us that the threat of a chikungunya epidemic in southern Europe is real.
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Affiliation(s)
- E Delisle
- Regional office of the French Institute for Public Health Surveillance (Cire Languedoc-Roussillon), Montpellier, France
| | - C Rousseau
- Regional office of the French Institute for Public Health Surveillance (Cire Languedoc-Roussillon), Montpellier, France
| | - B Broche
- Regional Health Agency of Languedoc-Roussillon, Montpellier, France
| | - I Leparc-Goffart
- Institut de Recherche Biomédicale des Armées, National Reference Laboratory for arboviruses, Marseille, France
| | - G L’Ambert
- Entente Interdépartementale pour la Démoustication du littoral Méditerranéen (EID Méditerranée), Public mosquito control operator, Montpellier, France
| | - A Cochet
- Regional office of the French Institute for Public Health Surveillance (Cire Languedoc-Roussillon), Montpellier, France
| | - C Prat
- Institut de Recherche Biomédicale des Armées, National Reference Laboratory for arboviruses, Marseille, France
| | - V Foulongne
- Montpellier University Hospital, Montpellier, France
| | - J B Ferré
- Entente Interdépartementale pour la Démoustication du littoral Méditerranéen (EID Méditerranée), Public mosquito control operator, Montpellier, France
| | - O Catelinois
- Regional office of the French Institute for Public Health Surveillance (Cire Languedoc-Roussillon), Montpellier, France
| | - O Flusin
- Institut de Recherche Biomédicale des Armées, National Reference Laboratory for arboviruses, Marseille, France
| | - E Tchernonog
- Montpellier University Hospital, Montpellier, France
| | - I E Moussion
- Regional Health Agency of Languedoc-Roussillon, Montpellier, France
| | - A Wiegandt
- Regional Health Agency of Languedoc-Roussillon, Montpellier, France
| | - A Septfons
- French Institute for Public Health Surveillance (Institut de Veille Sanitaire, InVS), Saint-Maurice, France
| | - A Mendy
- Regional Health Agency of Languedoc-Roussillon, Montpellier, France
| | - M B Moyano
- Regional Health Agency of Languedoc-Roussillon, Montpellier, France
| | - L Laporte
- Regional Health Agency of Languedoc-Roussillon, Montpellier, France
| | - J Maurel
- Regional Health Agency of Languedoc-Roussillon, Montpellier, France
| | - F Jourdain
- National Centre of Expertise on Vectors, Montpelier, France
| | - J Reynes
- Montpellier University Hospital, Montpellier, France
| | - M C Paty
- National Centre of Expertise on Vectors, Montpelier, France
| | - F Golliot
- Regional office of the French Institute for Public Health Surveillance (Cire Languedoc-Roussillon), Montpellier, France
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