Ammoniacal nitrogen recovery from swine slurry using a gas-permeable membrane: pH control strategies and feed-to-trapping volume ratio

Gas-permeable membrane (GPM) technology is gaining interest to recover nitrogen from residual effluents due to its effectiveness, simple operation and capacity of producing a nutrient rich product with fertilising value. In this study, a GPM contactor was used at 25 °C to recover total ammoniacal nitrogen (TAN) from swine slurry as a concentrated (NH4)2SO4 solution. Firstly, a synthetic solution was tested on a wide pH range (6-12). Results showed that the ammonia mass transfer constants (Km) increased from 7.9·10-9 to 1.2·10-6 m/s as the pH increased. The reagent consumption to control the pH per mole nitrogen recovered had a minimum at pH 9, which showed a Km value of 3.0·10-7 m/s. Secondly, various pH control strategies were tested using swine slurry, including (i) no pH control, (ii) pH control at 8.5, 9.0 and 10.0, and (iii) an initial spike of the NaOH equivalent to the required to control the pH at 9. The test without pH control reached a TAN recovery of around 60%, which could be an interesting strategy when high nitrogen recoveries or short operating times are not required. The pH control at 9 stood out as the most favourable operating condition due to its high Km and lower reagent consumption. Thirdly, several feed-to-trapping volume ratios ranging from 1:1 to 15:1 were tested using swine slurry at pH 9. These assays revealed that a GPM process with a high feed-to-trapping volume ratio fastens the recovery of 99% of TAN as a high purity (NH4)2SO4 solution containing 40 g N/L.

Improved dsRNA isolation and purification method validated by viral dsRNA detection using novel primers in Saccharomyces cerevisiae

Accurate genomic sequencing demands high-quality double-stranded RNA (dsRNA). Existing methods for dsRNA extraction from yeast, fungi, and plants primarily rely on cellulose, suitable only for small volume extractions, or the time-consuming lithium chloride precipitation. To streamline the traditional phenol-chloroform-based dsRNA extraction method, the main challenge is the reduction of mitochondrial DNA (mtDNA) and Single Stranded RNA (ssRNA) to no detectable levels after gel electrophoresis. This challenge is successfully addressed through the modified approach described here, involving phenol extraction at low pH, followed by the addition of ammonium sulfate to the aqueous buffer. The dsRNA isolated using this novel method exhibits comparable quality to that obtained through cellulose purification, and it is readily amenable to RT-PCR. Moreover, a single batch of yeast cell RNA isolation requires only 2-3 h of hands-on time, thus simplifying and expediting the process significantly.•Buffers were redesigned from [32,33,35].•No DNASE, Ribonuclease A or beads were used during the purification.•Simple and inexpensive dsRNA extraction and purification method is described.

Peptidomics Methods Applied to the Study of Flower Development

Understanding the global and dynamic nature of plant developmental processes requires not only the study of the transcriptome, but also of the proteome, including its largely uncharacterized peptidome fraction. Recent advances in proteomics and high-throughput analyses of translating RNAs (ribosome profiling) have begun to address this issue, evidencing the existence of novel, uncharacterized, and possibly functional peptides. To validate the accumulation in tissues of sORF-encoded polypeptides (SEPs), the basic setup of proteomic analyses (i.e., LC-MS/MS) can be followed. However, the detection of peptides that are small (up to ~100 aa, 6-7 kDa) and novel (i.e., not annotated in reference databases) presents specific challenges that need to be addressed both experimentally and with computational biology resources. Several methods have been developed in recent years to isolate and identify peptides from plant tissues. In this chapter, we outline two different peptide extraction protocols and the subsequent peptide identification by mass spectrometry using the database search or the de novo identification methods.

Effects of long-term (70 years) nitrogen fertilization and liming on carbon storage in water-stable aggregates of a semi-arid grassland soil

Grasslands cover up to 40.5% of the world's landmass and store 30% terrestrial carbon (C). Various practices, including mineral fertilization and liming, are used to manage these ecosystems with potential long-term effects on the size and distribution of soil aggregates and inevitably carbon dynamics. The objective of this study was to examine the long-term effects of ^{nitrogen fertilization and liming on soil carbon storage and its dynamics in water-stable} aggregates of a semi-arid grassland. Soil samples (0-10 cm) were collected from Ukulinga long-term grassland trial in Pietermaritzburg, South Africa where nitrogen fertilizers have been applied annually and lime every five years for 70 years. Ten treatments were studied: the control (0 kgN/ha and unlimited), lime at 2250 kg/ha (L), ammonium sulphate at 70 kg/ha (AS70) and 211 kg/ha (AS211); ammonium nitrate at 70 kg/ha (AN70) and 211 kg/ha (AN211); AS70 + lime (AS70L); AS211 + lime (AS211L); AN70 + lime (AN70L) and AN211 + lime (AN211L). Nitrogen fertilizers significantly reduced soil pH and increased total soil N. Liming increased soil pH with no effect on total soil N. Lime and lime + N fertilizer treatments had no effect on mean weight diameter (MWD) while separate N application decreased MWD and large macro-aggregates (LMA). Lime only treatment had no effect on water stable aggregate (WSA) fractions. Nitrogen fertilization and liming (separately or in combination) did not affect total C concentration and stocks. Overall, soils had very high total soil organic carbon ranging from 49.7 - 57.6 g/kg across treatments. Nitrogen fertilization decreased organic carbon in LMA in AS70 (1.52%) and AN211 (1.67%) treatments compared to the control (3.40%) which was in concert with increases in C associated with small macro-aggregates (SMA) and micro-aggregates (MiA and SCA). Organic carbon in SMA was 2.67 % (AS70); AS211 (2.62 %); AN70 (2.02 %); AN211 (2.49 %) compared to 1.26 % in the control. Lime + N fertilizer treatments increased C storage in all aggregate fractions compared to N fertilizer only treatments. The lack of response in total SOC to 70 years of N fertilization and liming suggests possible C saturation given the high soil C concentration. Changes in C associated with WSA fractions suggests their importance as diagnostic indicators of N fertilization and liming induced changes in SOC. Findings also show that ammonium-based N fertilization is associated with soil acidification, dispersion of LMA resulting in an increase of microaggregates and C stored in them. Liming can counteracts acidifying and the dispersive effect on NH₄ ⁺ associated with ammonium-based fertilizers thus restoring macro-aggregation in N fertilized grasslands. These findings suggests that long-term N addition may result in poor soil physical condition and possible stabilization of C in stable fractions.

Techno-economic assessment at full scale of a biogas refinery plant receiving nitrogen rich feedstock and producing renewable energy and biobased fertilisers

Anaerobic digestion of nitrogen (N) rich substrates might be hindered when ammonia (NH₃) formation reaches toxic levels for methanogenic microorganisms. One possible strategy to avoid inhibiting conditions is the removal of NH₃ from digestate by stripping and scrubbing technology and by recirculating N depleted digestate back to the digester. This study aimed to i) monitor the performance (mass and energy balances) of a full scale digestate processing cascade that includes an innovative vacuum side stream NH₃stripping and scrubbing system, ii) assess the production cost of ammonium sulphate (AS) solution and iii) evaluate its fertiliser quality. The use of gypsum to recover NH₃ in the scrubbing unit, instead of the more common sulphuric acid, results in the generation of AS and a fertilising liming substrate. Mass and nutrient balances indicated that 57% and 7.5% of ammonium N contained in digestate was recovered in the form of a 22% AS and liming substrate, respectively. The energy balance showed that about 3.8 kWh_el and 59 kWh_th were necessary to recover 1 kg of N in the form of AS. Furthermore, the production cost of AS, including both capital and operational costs, resulted to be 5.8 € t^-1 of digestate processed. According to the fertiliser quality assessment, this technology allows for the recovery of NH₃in the form of salt solutions that can be utilised as a substitute for synthetic mineral nitrogen fertilisers.

Thermophilic anaerobic digestion as suitable bioprocess producing organic and chemical renewable fertilizers: A full-scale approach

This work reports a full-scale study in which organic wastes were transformed by high-solid thermophilic anaerobic digestion (HSAD), into N fertilizers and organic fertilizers, i.e. digestate. The produced fertilizers were characterized over 42 months and their properties were discussed in comparisons with literature data. HSAD coupled with N stripping technology led to ammonia sulphate production having high N concentration (74 ± 2 g kg^-1 wet weight), neutral pH (6.8 ± 1.3) and low traces of other elements. Digestate showed both higher carbon (C) content (314 ± 30 g kg^-1 on dry matter (DM) and biological stability than green composts, indicating good amendment properties. Digestate was also interesting for its N (77 ± 3.7 g kg^-1 dry matter - DM) content, half of it in the ammonia form, and P content (28 ± 4.1 g kg^-1 DM) that was 43% readily available as soluble P-orthophosphate. K content was low (6.5 ± 1.3 g kg^-1 DM), indicating poor fertilizing ability of digestate for this element. All organic pollutants investigated were much lower than the limits required for agricultural use and levels of some of them were lower than the content revealed for other organic matrices such as agricultural and energy crop digestates and compost. Emerging pollutants (i.e., pharmaceuticals) were tested as markers and they were found to be below the detection limit (<0.01 mg kg^-1 DM) indicating very low content. The results obtained showed that HSAD coupled with N stripping allowed transforming sewage sludge into fertilizers and soil improvers exploitable in agriculture.

Organic matter removal and ammonia recovery by optimised treatments of swine wastewater

The organic matter and nitrogen contents of swine wastewater (SW) can be reduced and, at the same time, a fertiliser as ammonium salt can be recovered by wastewater treatments. One of the most promising technique is air stripping (AS). However, the operational parameters (pH, temperature and air flow rate) of AS must be optimised, in order to maximise the ammonia recovery and reduce the requirement of chemicals and energy. In this study 27 batch tests at laboratory scale were carried out on real SW, varying (individually or simultaneously) the pH (not adjusted, 8 and 10), temperature (ambient, 40 and 60 °C) and flow rate (0, 1 and 5 L_air L_SW^-1 min^-1) of AS; the changes in soluble COD (sCOD) and total ammonia nitrogen (TAN) concentrations were evaluated in response to the parameters adjustments. For the tests including AS, the ammonium sulphate recovered was also measured. In general (about 50% of the tests), more than 80% of TAN was removed. Most of these tests were carried out with pH and temperature control and AS at the highest flow rate; the highest efficiency was found for a combination of chemical, thermal and aeration treatments. For a few tests with the same process control, an increase (up to 50%) or a very limited (less than 10%) decrease of sCOD were detected; therefore, these treatments can be adopted prior of anaerobic digestion of SW. A high flow rate, which increases the removal efficiency of both sCOD and TAN, should be adopted, when AS is used as pre-treatment of activated sludge or lagooning plants. Very high amounts (over 80% of the theoretical yield) of ammonium sulphate were recovered by AS at the maximum air flow rate (5 L_air L_SW^-1 min^-1), which would provide a nitrogen fertiliser at a sustainable cost.

Relationship between tillage management and DMPSA nitrification inhibitor efficiency

Agricultural sustainability is compromised by nitrogen (N) losses caused by soil microbial activity. Nitrous oxide (N₂O) is a potent greenhouse gas (GHG) produced as consequence of nitrification and denitrification processes in soils. Nitrification inhibitors (NI) as 3,4-dimethylpyrazole-succinic acid (DMPSA) are useful tools to reduce these N losses from fertilization. The objective of this work was to test the efficiency of DMPSA in two different tillage management systems, conventional tillage (CT) and no-tillage (NT), in a winter wheat crop under Humid Mediterranean conditions. N fertilizer was applied as ammonium sulphate (AS) with or without DMPSA in a single or split application, including an unfertilized treatment. GHG fluxes (N₂O, CO₂ and CH₄) were measured by the closed chamber method. amoA and nosZI genes were quantified by qPCR as indicators of nitrifying and denitrifying populations. Nitrification was inhibited by DMPSA in both CT and NT, while the higher water filled pore space (WFPS) in NT promoted a better efficiency of DMPSA in this system. This higher efficiency might be due to a greater N₂O reduction to N₂ as result of the nosZI gene induction. Consequently, DMPSA was able to reduce N₂O emissions down to the unfertilized levels in NT. Provided that NT reduced CO₂ emissions and maintained crop yield compared to CT, the application DMPSA under NT management is a promising strategy to increase agro-systems sustainability under Humid Mediterranean conditions.

Process of ammonia removal from anaerobic digestion and associated ammonium sulphate production: Pilot plant demonstration

A process for the continuous extraction of ammonia from anaerobic digesters is proposed. In this process, a portion of the sludge treated in the digesters is continuously withdrawn and transferred to a thin film evaporator (TFE) unit, where the ammonia is stripped through a biogas stream. The ammonia-rich biogas is treated with a sulfuric acid/water solution in a reactive absorption unit, with production of ammonium sulphate. The chemistry of a CH₄/CO₂/NH₃ gas phase in thermodynamic equilibrium with a liquid sulfuric acid/water solution is investigated theoretically, with focus on the simultaneous absorption of CO₂ and NH₃ into the liquid phase. Pilot plant experimental data confirm the theoretical results. Further pilot plant experimental results obtained during on-off cycles of the stripping equipment demonstrate that, when the TFE unit is off, ammonia concentration in the digestate rises quickly, while, when the stripping equipment is turned on again, ammonia concentration drops down. On average, during the 180 days of pilot plant experimentation, 4.1 g N-NH₄ per kg of sludge fed to the digester, i.e. 19.3 g N-NH₄ per kg of total solids (TS) fed to the digester, are stripped from digestate and recovered as ammonium sulphate, demonstrating the feasibility of the proposed concept.

Application of salting-out thin layer chromatography in computational prediction of minimum inhibitory concentration and blood-brain barrier penetration of some selected fluoroquinolones

The 2017 FDA safety review regarding the CNS (central nervous system) side effects associated with the systemic use of fluoroquinolones antibacterials (FQs) was the key motivation to carry out this work. The main objective of this study is to investigate lipophilicity and retention parameters of some selected fluoroquinolones antibacterials (FQs) namely; levofloxacin (LEV), ofloxacin (OFL), gatifloxacin (GAT), norfloxacin (NOR), sparfloxacin (SPA), ciprofloxacin (CIP) and lomefloxacin (LOM) using salting-out thin layer chromatography (SOTLC). Statistically significant correlations between the chromatographically-obtained retention parameters and experimental log P values were found and expressed as quantitative structure retention relationship (QSRR) equations. Principal component analysis was carried out to explain the variation between chromatographic and both experimental and computed lipophilicity parameters. In another aspect of this study, a comparison between the chromatographically-determined retention parameters (for five of the drugs under study) obtained using SOTLC (current study) and relative lipophilicity (R_M0) determined using a previously reported RP (reversed-phase)-TLC method was carried out. Statistically significant correlation between the two methods was found, although R_M0 values obtained using SOTLC was lower than those reported using RP-TLC. Multiple linear regression analysis was performed to predict MIC (minimum inhibitory concentration) and blood brain barrier (BBB) penetration of the examined drugs in which efficient QSAR (quantitative structure-activity relationship) and QSPR (quantitative structure-property relationship) models were generated using the calculated chromatographic parameters (R_M0 and C₀). The described models can provide a useful approach to predict MIC and BBB penetration of newly synthesized FQs targeting to increase their activity against Gram-positive organisms and to minimize the associated CNS side effects.

Addendum to "Process development for elemental recovery from PGM tailings by thermochemical treatment: Preliminary major element extraction studies using ammonium sulphate as extracting agent" [Waste Manage. 50 (2016) 334-345]

In a recent paper, a promising two-stage process for the extraction of major elements from Platinum Group Metals (PGM) was presented (Mohamed et al., 2016). This process involved solid-solid thermochemical treatment of tailings with ammonium sulphate (stage one), followed by an optimised acid dissolution step (stage two). The inclusion of a control experiment for the optimal dissolution procedure was however overlooked. The new set of data delivered by the control experiment reveals that (i) most of the silicon and calcium are extracted via the acid leaching step, (ii) aluminium and magnesium are extracted at each stage of the process, and (iii) the thermochemical step is the main contributor to chromium and iron extraction. The conclusion of the previous paper (Mohamed et al., 2016), whereby thermochemical treatment with ammonium sulphate represents a promising technology for extracting valuable elements from South African PGM tailings, withstands.

Physiological Effects of GLT1 Modulation in Saccharomyces cerevisiae Strains Growing on Different Nitrogen Sources

Saccharomyces cerevisiae is one of the most employed cell factories for the production of bioproducts. Although monomeric hexose sugars constitute the preferential carbon source, this yeast can grow on a wide variety of nitrogen sources that are catabolized through central nitrogen metabolism (CNM). To evaluate the effects of internal perturbations on nitrogen utilization, we characterized strains deleted or overexpressed in GLT1, encoding for one of the key enzymes of the CNM node, the glutamate synthase. These strains, together with the parental strain as control, have been cultivated in minimal medium formulated with ammonium sulfate, glutamate, or glutamine as nitrogen source. Growth kinetics, together with the determination of protein content, viability, and reactive oxygen species (ROS) accumulation at the single cell level, revealed that GLT1 modulations do not significantly influence the cellular physiology, whereas the nitrogen source does. As important exceptions, GLT1 deletion negatively affected the scavenging activity of glutamate against ROS accumulation, when cells were treated with H2O2, whereas Glt1p overproduction led to lower viability in glutamine medium. Overall, this confirms the robustness of the CNM node against internal perturbations, but, at the same time, highlights its plasticity in respect to the environment. Considering that side-stream protein-rich waste materials are emerging as substrates to be used in an integrated biorefinery, these results underline the importance of preliminarily evaluating the best nitrogen source not only for media formulation, but also for the overall economics of the process.

Effect of fertilising with pig slurry and chicken manure on GHG emissions from Mediterranean paddies

Soil fertilisation affects greenhouse gas emissions. The objective of this study was to compare the effect of different fertilisation strategies on N2O, CH4 emissions and on ecosystem respiration (CO2 emissions), during different periods of rice cultivation (rice crop, postharvest period, and seedling) under Mediterranean climate. Emissions were quantified weekly by the photoacoustic technique at two sites. At Site 1 (2011 and 2012), background treatments were 2 doses of chicken manure (CM): 90 and 170kgNH4(+)-Nha(-1) (CM-90, CM-170), urea (U, 150kgNha(-1)) and no-N (control). Fifty kilogram N ha(-1) ammonium sulphate (AS) were topdress applied to all of them. At Site 2 (2012), background treatments were 2 doses of pig slurry (PS): 91 and 152kgNH4(+)-Nha(-1) (PS-91, PS-152) and ammonium sulphate (AS) at 120kgNH4(+)-Nha(-1) and no-N (control). Sixty kilogram NH4(+)-Nha(-1) as AS were topdress applied to AS and PS-91. During seedling, global warming potential (GWP) was ~3.5-17% of that of the whole rice crop for the CM treatments. The postharvest period was a net sink for CH4, and CO2 emissions only increased for the CM-170 treatment (up to 2MgCO2ha(-1)). The GWP of the entire rice crop reached 17Mg CO2-eqha(-1) for U, and was 14 for CM-170, and 37 for CM-90. The application of PS at agronomic doses (~170kgNha(-1)) allowed high yields (~7.4Mgha(-1)), the control of GWP (~6.5MgCO2-eqha(-1)), and a 13% reduction in greenhouse gas intensity (GHGI) to 0.89kgCO2-eqkg(-1) when compared to AS (1.02kgCO2-eqkg(-1)).

Process development for elemental recovery from PGM tailings by thermochemical treatment: Preliminary major element extraction studies using ammonium sulphate as extracting agent

Mine tailings can represent untapped secondary resources of non-ferrous, ferrous, precious, rare and trace metals. Continuous research is conducted to identify opportunities for the utilisation of these materials. This preliminary study investigated the possibility of extracting major elements from South African tailings associated with the mining of Platinum Group Metals (PGM) at the Two Rivers mine operations. These PGM tailings typically contain four major elements (11% Al2O3; 12% MgO; 22% Fe2O3; 34% Cr2O3), with lesser amounts of SiO2 (18%) and CaO (2%). Extraction was achieved via thermochemical treatment followed by aqueous dissolution, as an alternative to conventional hydrometallurgical processes. The thermochemical treatment step used ammonium sulphate, a widely available, low-cost, recyclable chemical agent. Quantification of the efficiency of the thermochemical process required the development and optimisation of the dissolution technique. Dissolution in water promoted the formation of secondary iron precipitates, which could be prevented by leaching thermochemically-treated tailings in 0.6M HNO3 solution. The best extraction efficiencies were achieved for aluminium (ca. 60%) and calcium (ca. 80%). 35% iron and 32% silicon were also extracted, alongside chromium (27%) and magnesium (25%). Thermochemical treatment using ammonium sulphate may therefore represent a promising technology for extracting valuable elements from PGM tailings, which could be subsequently converted to value-added products. However, it is not element-selective, and major elements were found to compete with the reagent to form water-soluble sulphate-metal species. Further development of this integrated process, which aims at achieving the full potential of utilisation of PGM tailings, is currently underway.

Comparison of procedures for the extraction of supernatants and cytotoxicity tests in Vero cells, applied to assess the toxigenic potential of Bacillus spp. and Lactobacillus spp., intended for use as probiotic strains

Interest in using Bacillus strains as probiotic components of animal feeds has grown in recent years. However, some of these strains, especially those taxonomically related to the Bacillus cereus group, may have enterotoxigenic activity. Assessment of their toxigenic potential by well-established and robust protocols is required before authorizing their use in animal nutrition. Three methods of extraction and concentration of supernatants of Bacillus and Lactobacillus strains (methanol extraction, ammonium sulphate and ultrafiltration concentration) and three cytotoxic tests in Vero cells (WST-1, LDH and protein synthesis inhibition assays) for the assessment of the cytotoxicity activity of Lactobacillus strains (as probiotic strains in human and animal nutrition) and Bacillus toyonensis BCT-7112(T) (as animal probiotic strain in animal nutrition-Toyocerin®-) were evaluated in this study. Methanol extraction was not useful under any circumstances. The other two concentration methods (ammonium sulphate and ultrafiltration) were feasible, with slightly greater sensitivity achieved by ultrafiltration. The probiotic strain B. toyonensis BCT-7112(T) proved to be a non-cytotoxic strain in all the protocols tested. However, some Lactobacillus strains showed cytotoxicity activity, regardless of the protocols applied.

Decreased PCDD/F formation when co-firing a waste fuel and biomass in a CFB boiler by addition of sulphates or municipal sewage sludge

Polychlorinated dibenzo-p-dioxins (PCDDs) and polychlorinated dibenzofurans (PCDFs) are formed during waste incineration and in waste-to-energy boilers. Incomplete combustion, too short residence times at low combustion temperatures (<700 °C), incineration of electronic waste and plastic waste containing chlorine are all factors influencing the formation of PCDD/Fs in boilers. The impact of chlorine and catalysing metals (such as copper and iron) in the fuel on PCDD/F formation was studied in a 12 MW(th) circulating fluidised bed (CFB) boiler. The PCDD/F concentrations in the raw gas after the convection pass of the boiler and in the fly ashes were compared. The fuel types were a so-called clean biomass with low content of chlorine, biomass with enhanced content of chlorine from supply of PVC, and solid recovered fuel (SRF) which is a waste fuel containing higher concentrations of both chlorine, and catalysing metals. The PCDD/F formation increased for the biomass with enhanced chlorine content and it was significantly reduced in the raw gas as well as in the fly ashes by injection of ammonium sulphate. A link, the alkali chloride track, is demonstrated between the level of alkali chlorides in the gas phase, the chlorine content in the deposits in the convection pass and finally the PCDD/F formation. The formation of PCDD/Fs was also significantly reduced during co-combustion of SRF with municipal sewage sludge (MSS) compared to when SRF was fired without MSS as additional fuel.

Is it possible to screen for milk or whey protein adulteration with melamine, urea and ammonium sulphate, combining Kjeldahl and classical spectrophotometric methods?

The Kjeldahl method and four classic spectrophotometric methods (Biuret, Lowry, Bradford and Markwell) were applied to evaluate the protein content of samples of UHT whole milk deliberately adulterated with melamine, ammonium sulphate or urea, which can be used to defraud milk protein and whey contents. Compared with the Kjeldahl method, the response of the spectrophotometric methods was unaffected by the addition of the nitrogen compounds to milk or whey. The methods of Bradford and Markwell were most robust and did not exhibit interference subject to composition. However, the simultaneous interpretation of results obtained using these methods with those obtained using the Kjeldahl method indicated the addition of nitrogen-rich compounds to milk and/or whey. Therefore, this work suggests a combination of results of Kjeldahl and spectrophotometric methods should be used to screen for milk adulteration by these compounds.