Holed up, but thriving: Impact of multitrophic cryoconite communities on glacier elemental cycles

Cryoconite holes (water and sediment-filled depressions), found on glacier surfaces worldwide, serve as reservoirs of microbes, carbon, trace elements, and nutrients, transferring these components downstream via glacier hydrological networks. Through targeted amplicon sequencing of carbon and nitrogen cycling genes, coupled with functional inference-based methods, we explore the functional diversity of these mini-ecosystems within Antarctica and the Himalayas. These regions showcase distinct environmental gradients and experience varying rates of environmental change influenced by global climatic shifts. Analysis revealed a diverse array of photosynthetic microorganisms, including Stramenopiles, Cyanobacteria, Rhizobiales, Burkholderiales, and photosynthetic purple sulfur Proteobacteria. Functional inference highlighted the high potential for carbohydrate, amino acid, and lipid metabolism in the Himalayan region, where organic carbon concentrations surpassed those in Antarctica by up to 2 orders of magnitude. Nitrogen cycling processes, including fixation, nitrification, and denitrification, are evident, with Antarctic cryoconite exhibiting a pronounced capacity for nitrogen fixation, potentially compensating for the limited nitrate concentrations in this region. Processes associated with the respiration of elemental sulfur and inorganic sulfur compounds such as sulfate, sulfite, thiosulfate, and sulfide suggest the presence of a complete sulfur cycle. The Himalayan region exhibits a higher potential for sulfur cycling, likely due to the abundant sulfate ions and sulfur-bearing minerals in this region. The capability for complete iron cycling through iron oxidation and reduction reactions was also predicted. Methanogenic archaea that produce methane during organic matter decomposition and methanotrophic bacteria that utilize methane as carbon and energy sources co-exist in the cryoconite, suggesting that these niches support the complete cycling of methane. Additionally, the presence of various microfauna suggests the existence of a complex food web. Collectively, these results indicate that cryoconite holes are self-sustaining ecosystems that drive elemental cycles on glaciers and potentially control carbon, nitrogen, sulfur, and iron exports downstream.

Rediscovery of Lycodongammiei (Blanford, 1878) (Serpentes, Colubridae) in Xizang, China, with comments on its systematic position

Lycodongammiei (Blanford, 1878), a rarely encountered species of Asian snake, is characterized by ambiguous systematics and biology. Based on a sole specimen of L.gammiei rediscovered in southeastern Xizang, China, we conduct a detailed morphological examination and description, and investigate the systematic position of this species. Morphologically, the newly collected specimen is closely aligned with specimens previously described. Mitochondrial DNA-based phylogenetic analyses reveal that L.gammiei constitutes an independent evolutionary lineage, forming a clade with L.fasciatus (Anderson, 1879), L.gongshan Vogel & Luo, 2011, L.butleri Boulenger, 1900, and L.cavernicolus Grismer, Quah, Anuar, Muin, Wood & Nor, 2014. The closest genetic distance between L.gammiei and its congeners was 10.2%. The discovery of L.gammiei in Medog County, China, signifies an eastward expansion of its known geographical distribution.

An investigation into the potential for upward range expansion in high-montane species on the roof of the world

Climate warming is occurring in high-mountain areas at a faster rate than the global average. To escape the increasing temperatures, alpine species may shift in distribution upwards, threatening cold-adapted nival plant specialists. However, little is known about the success of seedling emergence and establishment at high altitudes outside the current range, particularly in the highest mountain areas of the Himalayas. We selected four native alpine species occurring around 4000 m a.s.l. and sowed seeds at the natural growing site (GS), at a high elevation site (HS; 5000 m a.s.l.) and at high elevation with soil from the growing site (HS-S) in the Khumbu Valley, north-eastern Nepal. We monitored seedling emergence and establishment for two consecutive years. Seedling emergence and establishment varied between species. Emergence was similar between GS and HS and improved at HS-S. Establishment was low at high elevations with all but one species having high mortality after winter. Seedling emergence of low elevation plants is possible at high elevations in the Everest region, indicating species may be able to shift their distribution range upwards. However, successful establishment may be limited by the soil and high winter mortality at high elevations, although not in all species. Climate warming will potentially lead to upward migration of some Himalayan plant species, leading to altered community composition in high-mountain areas.

The transport and distribution of novel brominated flame retardants (NBFRs) and organophosphate esters (OPEs) in soils and moss along mountain valleys in the Himalayas

Although the Himalayas act as a natural barrier, studies have demonstrated that certain traditional persistent organic pollutants (POPs) can be transported into the Tibetan Plateau (TP) through the mountain valleys. Herein, we selected five mountain valleys in the Himalayas to investigate novel flame retardants (NFRs), as representative novel POPs, their concentration, distribution, transport behavior, potential sources and ecological risk. The results revealed that total concentrations of 7 novel brominated flame retardants (NBFRs) ranged from 4.89 to 2853 pg/g dry weight (dw) in soil and from not detected (ND) to 4232 pg/g dw in moss. Additionally, total concentrations of 10 organophosphate esters (OPEs) ranged from ND to 84798 pg/g dw in soil. Among the NFRs, decabromodiphenylethane (DBDPE) and tri-phenyl phosphate (TPhP) were the predominant compounds. NBFRs and OPEs concentrations were slightly higher than those in the polar regions. The correlation between different compounds and altitude varies in different areas, indicating that the NFRs distribution in the mountain valleys result from a combination of long-range transport and local sources. The ecological risk assessment using risk quotient (RQs) revealed that TPhP and tris (2-chloroisopropyl) phosphate (TCIPP) exhibited medium or high risks at some sites. This study sheds light on the transport pathways and environmental behaviors of the NFRs in the valleys and highlights the need for increased attention to the ecological risks posed by OPEs in the TP.

Landscape Heterogeneity Explains the Genetic Differentiation of a Forest Bird across the Sino-Himalayan Mountains

Mountains are the world's most important centers of biodiversity. The Sino-Himalayan Mountains are global biodiversity hotspot due to their extremely high species richness and endemicity. Ample research investigated the impact of the Qinghai-Tibet Plateau uplift and Quaternary glaciations in driving species diversification in plants and animals across the Sino-Himalayan Mountains. However, little is known about the role of landscape heterogeneity and other environmental features in driving diversification in this region. We utilized whole genomes and phenotypic data in combination with landscape genetic approaches to investigate population structure, demography, and genetic diversity in a forest songbird species native to the Sino-Himalayan Mountains, the red-billed leiothrix (Leiothrix lutea). We identified 5 phylogeographic clades, including 1 in the East of China, 1 in Yunnan, and 3 in Tibet, roughly consistent with differences in song and plumage coloration but incongruent with traditional subspecies boundaries. Isolation-by-resistance model best explained population differentiation within L. lutea, with extensive secondary contact after allopatric isolation leading to admixture among clades. Ecological niche modeling indicated relative stability in the extent of suitable distribution areas of the species across Quaternary glacial cycles. Our results underscore the importance of mountains in the diversification of this species, given that most of the distinct genetic clades are concentrated in a relatively small area in the Sino-Himalayan Mountain region, while a single shallow clade populates vast lower-lying areas to the east. This study highlights the crucial role of landscape heterogeneity in promoting differentiation and provides a deep genomic perspective on the mechanisms through which diversity hotspots form.

Contrasting biomass allocations explain adaptations to cold and drought in the world's highest-growing angiosperms

BACKGROUND AND AIMS

Understanding biomass allocation among plant organs is crucial for comprehending plant growth optimization, survival and responses to global change drivers. Yet, mechanisms governing mass allocation in vascular plants from extreme elevations exposed to cold and drought stresses remain poorly understood.

METHODOLOGY

We analyzed organ mass weights and fractions in 258 Himalayan herbaceous species across diverse habitats (wetland, steppe, alpine), growth forms (annual, perennial taprooted, rhizomatous, cushiony), and climatic gradients (3500-6150 m elevation) to explore whether biomass distribution adhered to fixed allometric or optimal partitioning rules, and how variation in size, phylogeny, and ecological preferences influence their strategies for resource allocation.

KEY FINDINGS

Following the optimal partitioning theory, Himalayan plants distribute more biomass to key organs vital for acquiring and preserving limited resources necessary for their growth and survival. Allocation strategies are mainly influenced by plant growth forms and habitat conditions, notably temperature, water availability, and evaporative demands. Alpine plants primarily invest in belowground stem bases for storage and regeneration, reducing aboveground stems while increasing leaf mass fraction to maximize carbon assimilation in their short growing season. Conversely, arid steppe plants prioritize deep roots over leaves to secure water and minimize transpiration. Wetland plants allocate resources to aboveground stems and belowground rhizomes, enabling them to resist competition and grazing in fertile environments.

CONCLUSIONS

Himalayan plants from extreme elevations optimize their allocation strategies to acquire scarce resources under specific conditions, efficiently investing carbon from supportive to acquisitive and protective functions with increasing cold and drought. Intraspecific variation and shared ancestry did not significantly alter Himalayan plants' biomass allocation strategies. Despite diverse evolutionary histories, plants from similar habitats have developed comparable phenotypic structures to adapt to their specific environments. This study offers new insights into plant adaptations in diverse Himalayan environments and underscores the importance of efficient resource allocation for survival and growth in challenging conditions.

Exploring morphological variability, in vitro antioxidant potential, and HR-LCMS phytochemical profiling of Phlomis cashmeriana Royle ex Benth. across different habitats of Kashmir Himalaya

Phytochemicals are broadly acknowledged for their health-promoting effects owing to the fact of their capacity to counteract free radicals (e.g., superoxide anion radical, hydroxyl radical, hydroperoxyl radical, singlet oxygen, hypochlorite, and nitric oxide) and shield against oxidative stress induced by environmental factors. This study aimed to investigate the relationship between altitude, morphology, soil parameters, in vitro antioxidant potential and phytochemical composition of Phlomis cashmeriana collected from four different locations of Kashmir Himalaya characterized by diverse habitats and elevations. Various factors, such as extraction method, solvent polarity, and habitat conditions, can impact the quantity and efficacy of phytochemicals in plants. The aim of current study was to analyze phytochemical composition and antioxidant activity of P. cashmeriana, an important medicinal plant found in the Kashmir Himalaya region. The antioxidant activity was accessed using several assays and the plant populations were selected based on their diverse habitat features and altitudes. HR-LCMS was conducted for both below-ground and above-ground parts. Some important compounds such as, catechin, vinainsenoside, acutilobin, and kaempferol were reported for the first time from P. cashmeriana. Results showed that methanol was the most efficient solvent for extracting phytochemicals. During the current study, it was also found that the below-ground parts exhibited superior antioxidant activity compared to the above-ground parts. Notably, Site IV demonstrated the highest antioxidant potential; a positive correlation between altitude and antioxidant activity was also found. In conclusion, present research identified specific elite populations having highest antioxidant potential and are well-suited for large-scale cultivation of P. cashmeriana.

Across the highest mountain on earth: discordant phylogeographic patterns and recent dispersal of Tibetan stone loaches (Triplophysa) in the Himalayas

Phylogeographic congruence among co-distributed taxa is regarded as an inherent inference to vicariance events. Nonetheless, incongruent patterns of contemporary lineage divergence among taxa indicated that species differ in their response to common past events. To investigate the role of past events, ecological traits and lineage diversification time in shaping the contemporary phylogeographic patterns, comparative analyses were conducted for Tibetan stone loaches in the Himalayas using three gene markers and two ecological traits (depth of caudal peduncle in their length and presence/absence of posterior chamber of the air bladder). By a thorough sampling in two flanks of the Himalayas, the authors detected that phylogenetic breaks were spatially discordant and divergences of populations were also temporally asynchronous in co-distributed loaches. Estimated divergence time using fossil-calibrated node dating indicated that the Tibetan stone loaches colonised into the south flank of the Himalayas until the Pleistocene. The demographic expansions were also disconcerted between populations in north and south flanks, or east and west Himalayas. Ongoing gene flows between populations in north and south sides implied that the Himalayas do not strictly impede dispersal of cold-adapted species. The results highlight that the quaternary climatic oscillation, in conjunction with ecological traits and lineage diversification time, shaped contemporary phylogenetic patterns of stone loaches in the Himalayas and provide new insights into the biodiversity and composition of species in the Himalayas and surrounding region.

Investigation of indoor thermal comfort and energy demand in different locations along the sub-Himalayan belt - A simulation based study

The sub-Himalayan region extends over 2500 km, extending over several countries. Though the effects of climate change is widely anticipated in the diverse but fragile ecosystem of the Himalayas, very less research has been conducted on the indoor environment of the buildings in these regions. In this study, a pre-validated model of 3-storey concrete residential building was used to study the indoor performance and thermal comfort in the face of climate change in the 8 (eight) different hill towns (hill stations) located from west to the east. Rise in ambient and indoor conditions were evident as a part of climate change with colder locations being affected the most. The thermal comfort assessment using both the climate chamber based PMV model and adaptive models revealed the decrease in cold related discomfort and increase in hot related discomfort. On an overall, the indoor conditions improved in these cold locations. The indoor and outdoor thermal condition and thermal comfort plummeted significantly with latitude and elevation. The heating demand in the future climate reduced by about 50-70 % in warmer locations, while the cooling demand increased by as much as 1000-2000 % in cold locations, respectively. Additionally, it was seen that the thermal environment and comfort both declined more rapidly with elevation in the locations lying in the western Himalayas as compared to those in the eastern Himalayas.

People's Perception and Awareness towards Plant Invasion, Its Impacts on Forest Ecosystem Services and Livelihood: A Tale of Central Himalayas

Plant invasion is a leading threat to biodiversity, ecosystem services and human wellbeing worldwide. In the central Himalayas intentionally or accidentally introduced invasive alien plant species (IAPS) facilitate their own establishment and spread, which is altering forest structure, vegetation composition, species diversity and livelihood. To understand the perception and awareness amongst local communities about invasive alien and native plants and its effect on local livelihood, a questionnaire-based study was conducted in 10 villages of Nainital district, Uttarakhand, India. Household data of 179 respondents were triangulated with key informants such as community leaders, teachers and older people. A majority of the respondents were found to be more familiar with the native species (Berberis asiatica, Pyracantha crenulata and Rubus ellipticus) than IAPS (Ageratina adenophora and Lantana camara). Both the IAPS negative impacts on native biodiversity, ecosystem services and livelihood. During the last two decades IAPS have encroached on various forests and caused a decrease in native species in the study area. According to the local perception, deforestation, forest fire, climate change, increased transport, light weight seed, no use and grazing etc. have been the main factors behind the spread of IAPS. A. adenophora invaded both chir pine (Pinus roxburghii) and banj oak (Quercus leucotrichophora) forests while L. camara remained more prominent in low elevation open canopy chir pine forest. Uprooting is the primary method used to control IAPS in crop fields and forests. The studied villages have not reported awareness and education programs about the IAPS. Our study demonstrates the wide range of perspectives on the threat posed by IAPS to forest ecosystems and natural resources. Education could help to raise awareness about the issue and could be beneficial in managing and controlling invasion in the Himalayan region.

Attributing Atmospheric Phosphorus in the Himalayas: Biomass Burning vs Mineral Dust

Atmospheric phosphorus is a vital nutrient for ecosystems whose sources and fate are still debated in the fragile Himalayan region, hindering our comprehension of its local ecological impact. This study provides novel insights into atmospheric phosphorus based on the study of total suspended particulate matter at the Qomolangma station. Contrary to the prevailing assumptions, we show that biomass burning (BB), not mineral dust, dominates total dissolved phosphorus (TDP, bioavailable) deposition in this arid region, especially during spring. While total phosphorus is mainly derived from dust (77% annually), TDP is largely affected by the transport of regional biomass-burning plumes from South Asia. During BB pollution episodes, TDP causing springtime TDP fluxes alone accounts for 43% of the annual budget. This suggests that BB outweighs dust in supplying bioavailable phosphorus, a critical nutrient, required to sustain Himalayas' ecological functions. Overall, this first-hand field evidence refines the regional and global phosphorus budget by demonstrating that BB emission, while still unrecognized, is a significant source of P, even in the remote mountains of the Himalayas. It also reveals the heterogeneity of atmospheric phosphorus deposition in that region, which will help predict changes in the impacted ecosystems as the deposition patterns vary.

Endophytic fungal community of Rosa damascena Mill. as a promising source of indigenous biostimulants: Elucidating its spatial distribution, chemical diversity, and ecological functions

The role of endophytes in maintaining healthy plant ecosystems and holding promise for agriculture and food security is deeply appreciated. In the current study, we determine the community structure, spatial distribution, chemical diversity, and ecological functions of fungal endophytes of Rosa damascena growing in the North-Western Himalayas. Culture-dependent methods revealed that R. damascena supported a rich endophyte diversity comprising 32 genera and 68 OTUs. The diversity was governed by climate, altitude, and tissue type. Species of Aspergillus, Cladosporium, Penicillium, and Diaporthe were the core endophytes of the host plant consisting of 48.8% of the endophytes collectively. The predominant pathogen of the host was Alternaria spp., especially A. alternata. GC-MS analyses affirmed the production of diverse arrays of volatile organic compounds (VOC) by individual endophytes. Among the primary rose oil components, Diaporthe melonis RDE257, and Periconia verrucosa RDE85 produced phenyl ethyl alcohol (PEA) and benzyl alcohol (BA). The endophytes displayed varied levels of plant growth-promoting, colonization, and anti-pathogenic traits. Between the selected endophytes, P. verrucosa and D. melonis significantly potentiated plant growth and the flavonoids and chlorophyll content in the host. The potential of these two endophytes and their metabolites PEA and BA was confirmed on Nicotiana tabacum. The treatments of the metabolites and individual endophytes enhanced the growth parameters in the model plant significantly. The results imply that P. verrucosa and D. melonis are potential plant growth enhancers and their activity may be partially due to the production of PEA and BA. Thus, R. damascena harbors diverse endophytes with potential applications in disease suppression and host growth promotion. Further investigations at the molecular level are warranted to develop green endophytic agents for sustainable cultivation of R. damascena and biocontrol of leaf spot disease.

Preference, perceived change, and professed relationship among ecosystem services in the Himalayas

The demand side of ecosystem service (ES), especially preference and perception of supply and interactions among ES, is an important yet underexplored research area for landscape planning and management in human-dominated landscapes. Taking a case of multifunctional landscape in the Hindu-Kush Himalayan region, we carried out a social survey of ES, focusing on preference, perceived change, and observed relationship among six major ES from the local people's perspective. Using a semi-structured questionnaire, data collection was done from 300 households from 10 categories of human settlements, based on watershed and land cover types. Garrett mean score (GMS), ordinal logistic regression estimates, and Chi-square test were performed for quantitative data, while an inductive approach was adopted for qualitative data analysis. The results show that at the landscape level, local people preferred water yield (GMS = 70) and crop production (GMS = 66) as the most preferred ES, whereas habitat quality (GMS = 37) and carbon sequestration (GMS = 35) were among the least preferred ES. More than 70% of the respondents believed that the supply of crop production has decreased over the last two decades; however, the supply of other provisioning and non-provisioning ES has increased as observed by majority of the respondents. Among the 15 pairs of ES, local people believe that co-occurrence of ES is possible. Majority of the respondents said that there exist synergistic relationship among 13 pairs of ES, except crop production which is negatively related with timber production and carbon sequestration. Among the identified trade-offs in ES, majority of local people believed that direct trade-offs (i.e., linear inverse relationship) is dominant as observed in 8 pairs of ES, followed by concave and convex trade-offs. Based on our analysis, we argue that the preference and perceived change of ES is more dependent on spatial heterogeneity of communities (i.e., watershed type, municipal category, and land cover type of residence) than socio-economic determinants. Further, we have discussed and suggested few policy and management measures including place-based spatial assessment of the social demand and preference, embracing agroforestry practices in ecosystem management programs, mainstreaming non-local ES in local decision making by incentives, and optimizing the supply of desired ES though integrated biophysical and socio-economic assessment of the landscape.

Snow Cover Response to Climatological Factors at the Beas River Basin of W. Himalayas from MODIS and ERA5 Datasets

Glaciers and snow are critical components of the hydrological cycle in the Himalayan region, and they play a vital role in river runoff. Therefore, it is crucial to monitor the glaciers and snow cover on a spatiotemporal basis to better understand the changes in their dynamics and their impact on river runoff. A significant amount of data is necessary to comprehend the dynamics of snow. Yet, the absence of weather stations in inaccessible locations and high elevation present multiple challenges for researchers through field surveys. However, the advancements made in remote sensing have become an effective tool for studying snow. In this article, the snow cover area (SCA) was analysed over the Beas River basin, Western Himalayas for the period 2003 to 2018. Moreover, its sensitivity towards temperature and precipitation was also analysed. To perform the analysis, two datasets, i.e., MODIS-based MOYDGL06 products for SCA estimation and the European Centre for Medium-Range Weather Forecasts (ECMWF) Atmospheric Reanalysis of the Global Climate (ERA5) for climate data were utilized. Results showed an average SCA of ~56% of its total area, with the highest annual SCA recorded in 2014 at ~61.84%. Conversely, the lowest annual SCA occurred in 2016, reaching ~49.2%. Notably, fluctuations in SCA are highly influenced by temperature, as evidenced by the strong connection between annual and seasonal SCA and temperature. The present study findings can have significant applications in fields such as water resource management, climate studies, and disaster management.

Aerosols heat up the Himalayan climate

The impact of aerosols, especially the absorbing aerosols, in the Himalayan region is important for climate. We closely examine ground-based high-quality observations of aerosol characteristics including radiative forcing from several locations in the Indo-Gangetic Plain (IGP), the Himalayan foothills and the Tibetan Plateau, relatively poorly studied regions with several sensitive ecosystems of global importance, as well as highly vulnerable large populations. This paper presents a state-of-the-art treatment of the warming that arises from these particles, using a combination of new measurements and modeling techniques. This is a first-time analysis of its kind, including ground-based observations, satellite data, and model simulations, which reveals that the aerosol radiative forcing efficiency (ARFE) in the atmosphere is clearly high over the IGP and the Himalayan foothills (80-135 Wm-2 per unit aerosol optical depth (AOD)), with values being greater at higher elevations. AOD is >0.30 and single scattering albedo (SSA) is ∼0.90 throughout the year over this region. The mean ARFE is 2-4 times higher here than over other polluted sites in South and East Asia, owing to higher AOD and aerosol absorption (i.e., lower SSA). Further, the observed annual mean aerosol-induced atmospheric heating rates (0.5-0.8 Kelvin/day), which are significantly higher than previously reported values for the region, imply that the aerosols alone could account for >50 % of the total warming (aerosols + greenhouse gases) of the lower atmosphere and surface over this region. We demonstrate that the current state-of-the-art models used in climate assessments significantly underestimate aerosol-induced heating, efficiency and warming over the Hindu Kush - Himalaya - Tibetan Plateau (HKHTP) region, indicating a need for a more realistic representation of aerosol properties, especially of black carbon and other aerosols. The significant, regionally coherent aerosol-induced warming that we observe in the high altitudes of the region, is a significant factor contributing to increasing air temperature, observed accelerated retreat of the glaciers, and changes in the hydrological cycle and precipitation patterns over this region. Thus, aerosols are heating up the Himalayan climate, and will remain a key factor driving climate change over the region.

Characterization of bioactive and fruit quality compounds of promising mango genotypes grown in Himalayan plain region

Twenty mango genotypes grown in the plains of the Himalayas were characterized by their physical, physiological, biochemical, mineral and organoleptic attributes: fruit firmness, weight, peel thickness, shape, dry seed weight, respiration rate, weight loss, and shelf life. Biochemical attributes such as soluble solids, total carotenoids, total phenolic content, antioxidant activity, titratable acidity, ascorbic acid and total sugars were also determined. In addition, mineral content and fruit-softening enzymes were measured, and an organoleptic evaluation was performed. Polygalactouronase (PG), pectin methylesterase (PME) and lipoxygenase (LOX) were measured from the pulp adjacent to the peel. Similarly, biochemical attributes and mineral content were evaluated using fruit pulp, while organoleptic evaluation included fruit pulp characters and the fruit's external appearance. The results of the study showed that the 'Malda' genotype exhibited the highest total phenolic content (560.60 µg/100 g), total antioxidant (5.79 µmol TE/g), and titratable acidity (0.37%) among the tested genotypes. 'Amrapali' had the highest soluble solid content (25.20 °B), 'Jawahar' had the highest ascorbic acid content (44.20 mg/100 g pulp), 'Mallika' had the highest total flavonoid content (700.00 µg/g) and 'Amrapali' had the highest total carotenoid content (9.10 mg/100 g). Moreover, the genotypes 'Malda', 'Safed Malda'and 'Suvarnarekha' had a shelf life of 4-5 days longer than other tested genotypes. The genotypes with high biochemical attributes have practical utility for researchers for quality improvement programmes and processing industries as functional ingredients in industrial products. This study provides valuable information on the nutritional and functional properties of different mango genotypes, which can aid in developing improved varieties with enhanced health benefits and greater practical utility for processing industries.

Chir pine forest and pre-monsoon drought determine spatial, and temporal patterns of forest fires in Uttarakhand Himalaya

Associated with farming practices (between 300 and 2000 m elevations), human-ignited small, and patchy surface forest fires occur almost every year in Uttarakhand (between 28°43`- 31°27` N and 77°34`- 81°02`E; area 51,125 km2), a Himalayan state of India. Using fire incidence data of 19 years (2002-2020) generated by MODIS, we analysed the factors which drive temporal and spatial patterns of fire in the region. The fire incidence data were organized by 24 forest divisions, the unit of state forest management and administration. The standardized regression model showed that pre-monsoon temperature (March to May or mid-June), proportional area of the forest division under chir pine (Pinus roxburghii) forest (positive effect), and pre-monsoon and winter precipitation (negative effect) accounted for 56% of the variance in fire incidence density (FID). The pre-monsoon temperature (warmer) and precipitation (lower) were significantly different in 2009, 2012, 2016 and 2019, the years with high FID (average 54.9 fire/100 km2) than the rest of years with low FID (average 20.9 fire/100 km2). During the two decades of warming, high FID (> 30 incidence per year /100 km2) occurred after every three to four years, and fire peaks tended to increase with time. The study suggests that effective fire management can be attained by improving pre-monsoon precipitation forecasting and targeting forest compartments with a higher occurrence of chir pine and fire-vulnerable oaks. Furthermore, since fires are human-ignited, periodical analysis of changes in population distribution and communities' dependence on forests would need to be conducted.

Supplementary Information

The online version contains supplementary material available at 10.1007/s42965-023-00306-9.

The COVID-19 lockdown: a unique perspective into heterogeneous impacts of transboundary pollution on snow and ice darkening across the Himalayas

The Tibetan Plateau holds the largest mass of snow and ice outside of the polar regions. The deposition of light-absorbing particles (LAPs) including mineral dust, black carbon and organic carbon and the resulting positive radiative forcing on snow (RFSLAPs) substantially contributes to glacier retreat. Yet how anthropogenic pollutant emissions affect Himalayan RFSLAPs through transboundary transport is currently not well known. The COVID-19 lockdown, resulting in a dramatic decline in human activities, offers a unique test to understand the transboundary mechanisms of RFSLAPs. This study employs multiple satellite data from the moderate resolution imaging spectroradiometer and ozone monitoring instrument, as well as a coupled atmosphere-chemistry-snow model, to reveal the high spatial heterogeneities in anthropogenic emissions-induced RFSLAPs across the Himalaya during the Indian lockdown in 2020. Our results show that the reduced anthropogenic pollutant emissions during the Indian lockdown were responsible for 71.6% of the reduction in RFSLAPs on the Himalaya in April 2020 compared to the same period in 2019. The contributions of the Indian lockdown-induced human emission reduction to the RFSLAPs decrease in the western, central, and eastern Himalayas were 46.8%, 81.1%, and 110.5%, respectively. The reduced RFSLAPs might have led to 27 Mt reduction in ice and snow melt over the Himalaya in April 2020. Our findings allude to the potential for mitigating rapid glacial threats by reducing anthropogenic pollutant emissions from economic activities.

Ventilatory function and oxygen delivery at high altitude in the Himalayas

This study aimed to evaluate changes in lung function assessed by spirometry and blood gas content in healthy high-altitude sojourners during a trek in the Himalayas. A group of 19 Italian adults (11 males and 8 females, mean age 43 ±15 years, and BMI 24.2 ±3.7kg/m²) were evaluated as part of a Mount Everest expedition in Nepal. Spirometry and arterial blood gas content were evaluated at baseline in Kathmandu (≈1400m), at the Pyramid Laboratory - Observatory (peak altitude of ≈5000m), and on return to Kathmandu 2-3 days after arrival at each site. All participants took 250mg of acetazolamide per os once daily during the ascent. We found that arterial hemoglobin saturation, O₂ and CO₂ partial pressures, and the bicarbonate level all decreased (in all cases, p<0.001 with R²=0.70-0.90), while pHa was maintained stable at the peak altitude. Forced vital capacity (FVC) remained stable, while forced expiratory volume in 1sec (FEV1) decreased (p=0.010, n²_p=0.228), resulting in a lower FEV1/FVC ratio (p<0.001, n²_p=0.380). The best predictor for acute mountain sickness was the O₂ partial pressure at the peak altitude (p=0.004, R²=0.39). Finger pulse oximetry overestimated peripheral saturation relative to arterial saturation. We conclude that high-altitude hypoxia alters the respiratory function and the oxygen saturation of the arterial blood hemoglobin. Additionally, air rarefaction and temperature reduction, favoring hypoxic bronchoconstriction, could affect respiration. Pulse oximetry seems not enough to assist medical decisions at high altitudes.

Microplastic pollution in the Himalayas: Occurrence, distribution, accumulation and environmental impacts

Microplastics have been reported from various ecosystems including lakes, ponds, wetlands, mountains, and forests globally. Recent research works showed microplastic deposition and accumulation in the Himalayan mountains and adjoining ecosystems, rivers and streams. Fine particles of microplastic originating from different anthropogenic sources can travel long distances, even upwards (altitudinally) through atmospheric transport and can pollute remote and pristine locations situated in the Himalayas. Precipitation also plays a vital role in influencing deposition and fallout of microplastics in the Himalayas. Microplastics can be trapped in the snow in glaciers for a long time and can be released into freshwater rivers by snow melting. Microplastic pollution in Himalayan rivers such as the Ganga, Indus, Brahmaputra, Alaknanda, and Kosi has been researched on both the upper and lower catchments. Additionally, Himalayan region draws many domestic and international tourists throughout the year, resulting in generation of massive and unmanageable volume of plastics wastes and finally ending up in the open landscapes covering forests, river streams and valley. Fragmentation of these plastic wastes can lead to microplastic formation and accumulation in the Himalayas. This paper discusses and explains occurrence and distribution of microplastics in the Himalayan landscapes, possible adverse effects of microplastic on local ecosystems and human population and policy intervention needed to mitigate microplastic pollution in the Himalayas. A knowledge gap was noticed regarding the fate of microplastics in the freshwater ecosystems and their control mechanisms in the Indian Himalayas. Regulatory approaches for microplastics management in the Himalayas sit within the broader plastics/solid waste management and can be implemented effectively by following integrated approaches.

Abundance and characteristics of microplastics in a freshwater river in northwestern Himalayas, India - Scenario of riverbank solid waste disposal sites

Microplastics (MPs) are one of the challenging and established contaminants that have adverse implications on human health. The focus of this study was to quantify and analyze the contribution of unscientific municipal solid waste (MSW) disposal sites to the MPs in the Jhelum River and the risk associated with it. Quantitative analysis of our study showed a mean MP concentration of 1474 ± 1026 particles/m³ for the entire stretch of the river. All the sites confirmed the presence of MPs with the concentration ranging from 600 particles/m³ to 2500 particles/m³. The size distribution of MPs suggested that 34 % of the microplastics ranged between 300 μm to 75 μm while 66 % of the particles varied between 300 μm to 5 mm. The concentrations of MPs downstream of unscientific disposal sites were found to increase threefold to that of upstream. The Fourier Transform Infrared Spectroscopy (FT-IR) confirmed the presence of polyethylene (PE) in the majority followed by polyvinyl chloride (PVC) and polypropylene (PP). The flakes were dominant throughout the river followed by filaments, fragments, and spherules. Count based Pollution level indexing (PLI) estimated 3-14 times MP contamination in the river with respect to contamination in glacial runoffs. The risk assessment study of the MPs indicated an increase of around 10.2 % in ingestion rates of MPs due to the unscientific disposal of MSW on the banks of the freshwater body. The values of polymer hazard index (PHI) and potential ecological risk index (PERI) were in the extreme case of pollution (PHI>1000 and PERI>1200). This study manifests the adversities of unscientific municipal solid waste disposal for timely waste management.

A comparison of traditional plant knowledge between Daman people and Tibetans in Gyirong River Valley, Tibet, China

BACKGROUND

By comparing the differences in plant use between various cultures or regions, we can gain a better understanding of traditional knowledge of plant use among different groups, which may lead to a more objective understanding. Even though the Tibetan and Daman people live in the same ecosystem in Gyirong town, China, their cultural backgrounds and livelihoods differ. Therefore, the objective of this study is to document the traditional knowledge of plant use among the Daman people and compare it with the local Tibetan knowledge of plant use. By doing so, we aim to explore the relationship between plant selection and use and the cultural backgrounds of different groups.

METHODS

During fieldwork, ethnobotanical data were collected using various methods including free listings, key informant interviews, and semi-structured interviews. To quantify the importance of plant species in the Daman people's culture, the culture importance index, informant consensus factor index, and The Index of Agreement on Species consensus (IASc) were used. In addition, we cited previous ethnobotanical survey data from the Tibetan in Gyirong. To more comprehensively compare the differences in plant use between the Daman and Tibetan, this study constructed a knowledge network to compare the knowledge differences between the two groups.

RESULTS

In this study, traditional knowledge was collected from 32 Daman informants, resulting in a total of 68 species belonging to 39 families mentioned by Daman people and 111 species mentioned by Tibetans. Of these, 58 plants were used by both populations. The plants were classified into 3 categories and 28 subcategories, with 22 identical classes in both groups. The majority of use categories showed a high degree of sharing in both groups, and the Tibetan people had more plant use categories than the Daman people. Five plants with IASc value > 0.5 were identified in both groups: Rhododendron anthopogon D. Don, Artemisia japonica Thunb., Juniperus indica Bertol., Gastrodia elata Blume, and Rheum australe D. Don. The analysis of the knowledge network revealed a 66% overlap between the knowledge of the Daman and the knowledge of the Tibetans. Additionally, the plant knowledge of Tibetan people was found to be richer and more complex than that of the Daman people. However, the Daman people possess 30 unique knowledge items.

CONCLUSIONS

From the perspective of plant use, the history of the Daman people's discrete migration on the border between China and Nepal allows them to retain their own knowledge of plant use. The status quo of joining Chinese nationality and settling in Gyirong town allows them to gradually integrate into the local Tibetan society. In summary, despite living in the same ecosystem and biodiversity background, the plant utilization of the Daman people and Tibetans still shows significant differences, which are due to their different cultural backgrounds and social status.

Determinants of quantification of tourism waste in the hilly terrain of Himalayas: A spatial approach

The rapid economic development in environmentally sensitive zone of Himalayas resulted in the increased generation of tourism waste. However, the accounting methodology for accumulation of tourism waste in the hilly terrain was found to be missing. Accordingly, the socio-economic factors influencing the tourism waste generation were identified, and their correlation analysis was performed. The tourism waste generated within and outside an urban local body was quantified over a period of 12 years (2008-2019) using a novel methodology, considering the socioeconomic factors, such as economic significance, geographical terrain, location of tourist destinations and tourism-related activities. The spatial dependency of tourism waste accumulation in the Himalayan state of Himachal Pradesh, India was analyzed using the geographically weighted regression. Furthermore, the air pollutants' emission (PM_2.5, PM₁₀, CO, SO₂ and NO_x) from the open burning of neglected tourism waste were also quantified and compared with the existing literature.

Gene flow drives genomic diversity in Asian Pikas distributed along the core and range-edge habitats in the Himalayas

Studying the genetic variation among different species distributed across their core and range-edge habitats can provide valuable insights into how genetic variation changes across the species' distribution range. This information can be important for understanding local adaptation, as well as for conservation and management efforts. In this study, we have carried out genomic characterization of six species of Asian Pikas distributed along their core and range-edge habitats in the Himalayas. We utilized a population genomics approach using ~28,000 genome-wide SNP markers obtained from restriction-site associated DNA sequencing. We identified low nucleotide diversity and high inbreeding coefficients in all six species across their core and range-edge habitats. We also identified evidence of gene flow among genetically diverse species. Our results provide evidence of reduced genetic diversity in Asian pikas distributed across the Himalayas and the neighboring regions and indicate that recurrent gene flow is possibly a key mechanism for maintaining genetic diversity and adaptive potential in these pikas. However, full-scale genomics studies that utilize whole-genome sequencing approaches will be needed to quantify the direction and timing of gene flow and functional changes associated with introgressed regions in the genome. Our results represent an important step toward understanding the patterns and consequences of gene flow in species, sampled at the least studied, yet climatically vulnerable part of their habitat that can be further used to inform conservation strategies that promote connectivity and gene flow between populations.

Trait specific marker-based characterization and population structure analysis in rice (Oryza sativa L.) germplasm of Kashmir Himalayas

BACKGROUND

Rice is a key food grain contributor to the global food grain basket and is considered the main food crop in India with a large number of varieties released every year. SSR markers have proven to be an excellent tool for studying genetic diversity. As a result, the present study was done to characterize and assess genetic diversity as well as population structural aspects.

METHODS AND RESULTS

Fifty genotypes of rice were characterized using 40 SSR markers to assess the genetic diversity and genetic relationship. A total of 114 alleles were amplified with an average of 2.85 alleles per locus. The Polymorphism Information Content (PIC) values varied from 0.30 (RM162) to 0.58 (RM413) with an average of 0.44. Gene diversity was in the range of 0.35 (RM162) to 0.66 (RM413), with an average value of 0.52, while heterozygosity ranged from 0.18 (RM27) to 0.74 (RM55), with an average of 0.39. The population structure revealed a narrow genetic base with only three major subpopulations. Analysis of molecular variance revealed that 74% of the variation was attributed within individuals, 23% was among individuals, and 3% was among populations. Pairwise Fst value of population A & B is 0.024, population B & C is 0.120 and population A & C is 0.115. Dendrogram grouped the genotypes into three clusters with wide variation among the accessions.

CONCLUSION

Genotyping combined with phylogeny and population structure analysis proved to be a powerful method for characterizing germplasm in this study. There is significant gene flow within populations, as well as the presence of different combinations of alleles, and that allelic exchange rates within the populations are higher than among the populations. Assessing the genetic diversity among individual genotypes within populations is quite useful in selecting candidate parents for future breeding programs to improve the target traits in rice for the Himalayan region.

Impact of climate change on distribution of common leopard (Panthera pardus) and its implication on conservation and conflict in Nepal

Climate change is projected to create alterations in species distributions over the planet. The common leopard (Panthera pardus) serves an important ecological function as a member of the big carnivore guild, but little is known about how climate change may affect their distribution. In this study, we use MaxEnt to simulate the geographic distributions by illustrating potential present and future ranges of common leopard by utilizing presence records alongside important topographic and bioclimatic variables based on two shared socioeconomic pathways (SSP2-4.5 and SSP5-8.5) scenarios. The goals of this study was to look into possible distribution ranges of common leopards due to climate change, as well as explore the implications for conservation and potential conflict with humans. At present, 4% of Nepal was found to be highly suitable for common leopards, 43% suitable, 19% marginally suitable, and 34% unsuitable. A large portion of the climatically suitable habitat was confined to non-protected areas, and the majority of the highly suitable habitat was encompassed by forest land, followed by agricultural areas. Elevation, mean temperature of driest quarter, annual precipitation, and precipitation seasonality were the variables influencing habitat suitability for the common leopard. A significant increase in marginally suitable habitat was observed in the high mountain region, indicating a shift of habitat in upper elevation areas due to the effects of climate change. We recommend timely management of these potential habitats to expand the range of this vulnerable species. At the same time, a combination of expanding new habitats and poor management practices could escalate human-leopard conflict. Therefore, further study on the impact of climate change on the distribution of prey species and proper habitat management techniques should be prioritized to mitigate conflicts.

A shotgun approach to explore the bacterial diversity and a brief insight into the glycoside hydrolases of Samiti lake located in the Eastern Himalayas

BACKGROUND

The Himalayas have always been an enigma and, being biodiversity hotspots, are considered extremely important from an ecological point of view. Recent advances in studies regarding high-altitude lakes have garnered relevant importance as these habitats could harbor potential psychrophilic and psychrotrophic microbes with bio-prospective applications. Contemplating the above scenario, the present study has been undertaken to understand the diversity and the functional capacities of the microbes thriving in this lake.

RESULTS

In our present study on Samiti Lake, the abundance of Proteobacteria as the major phylum was seen in both the soil and water samples. Incase of the ABSLW (water) and ABS1 (soil) sample, 148,066 and 239,754 predicted genes, were taken for functional analysis. The KEGG analysis showed that ABSLW and ABS1 had 122,911 and 160,268, genes assigned to KO terms respectively. Whereas in case of COG functional analysis, 104,334 and 130,191 genes were assigned to different COG classes for ABSLW and ABS1 respectively. Further, on studying the glycoside hydrolases, an abundance of GH13, GH2, GH3, GH43, and GH23 in both the soil and water samples were seen.

CONCLUSION

Our study has provided a comprehensive report about the bacterial diversity and functional capacities of microbes thriving in Samiti Lake.  It has also thrown some light on the occurrence of glycoside hydrolases in this region, as they have numerous biotechnological applications in different sectors.

Monitoring the distribution pattern and invasion status of Ageratina adenophora across elevational gradients in Sikkim Himalaya, India

Understanding the spread intensity and population dynamics of invasive plant species is a prerequisite for developing management strategies in the Himalayan Forest ecosystems that are experiencing an accelerated rate of climate change. Although there are studies on the occurrence of few invasive species in the Himalayan ecosystems, systematic information on their intensity of spread and species association is still missing. Considering existing data gaps, we aimed to assess the intensity of spread and distribution pattern of A. adenophora, one of the high-concern invasive species (HiCIS) of India that is causing havoc in the Himalayas, across an elevational gradient. Field data were collected in 2018 and 2021 in the Indian federal state of Sikkim, located in the Eastern Himalayas. We analyzed the population status and species association of A. adenophora along an elevational gradient ranging from > 600 m to 2700 m above sea level, which was divided into seven gradients of 300 m width, and each gradient was further randomly sampled. Overall, 81 species were present in association with A. adenophora, including 58 herbs, 19 shrubs, and 4 climbers, belonging to 30 families and 67 genera in the region. No other species continuously co-occurred along with A. adenophora throughout the elevation ranging from > 600 m to 2700 m. The species observed increased frequency (100%), density (40.51 ind./100 m²), and basal cover (11.25 cm²/m²) in the elevational gradient 1500-1800 m in 2018. In 2021, A. adenophora dominated the highest elevational gradient (< 2400-2700 m) with increased frequency (99.96%), density (58.41 ind./100m²), and basal cover (42.54 cm²/100m²), which demonstrated rapid invasion and improved plant health and reproductive vigor in comparison to the lower elevational gradient in Sikkim Himalaya. Despite being completely absent at the highest elevation (< 2400-2700 m), in 2018, it observed gregarious spread at the highest elevation in 2021, which is of serious concern to ecologists. The presence of the targeted species in all seven studied altitudinal gradients reflects stage III of the species invasion. An enormous shift in the distribution pattern along elevational gradients within a short time span is alarming for the Himalayan ecosystem since it is becoming a thriving habitat for invasive species owing to anthropogenic activity. We mapped the potential geographical extent using the species distribution model (SDM) and predicted the suitable habitat of distribution in Sikkim Himalaya. In order to curtail the spread and counteract the negative impact of this species on native vegetation in Sikkim Himalaya and ultimately reverse the process, local and regional initiatives for its biological control and management must be taken.

An ethnobotanical study on wild plants used by Tibetan people in Gyirong Valley, Tibet, China

BACKGROUND

Gyirong Valley known as the "Back Garden of the Himalayas" is located in the core area of the Everest National Nature Reserve. It is also one of the important ports from ancient Tibet to Kathmandu, Nepal, since ancient times. Over the years, the Tibetans of Gyirong had accumulated sufficient traditional knowledge about local plant resources. However, there is almost no comprehensive report available on ethnobotanical knowledge about the local people. The purposes of this study were to (1) conduct a comprehensive study of wild plants used by Tibetan people in Gyirong Valley and record the traditional knowledge associated with wild useful plants, (2) explore the influence of Tibetan traditional culture and economic development on the use of wild plants by local people, and (3) explore the characteristics of traditional knowledge about wild plants of Tibetans in Gyirong.

METHODS

Ethnobotanical data were documented through free listings, key informant interviews and semi-structured interviews during fieldwork. The culture importance index and the informant consensus factor index were used as quantitative indices.

RESULTS

In total, 120 informants (61 women and 59 men) and 3333 use reports and 111 wild plant species belonging to 39 families and 81 genera were included. These use reports were then classified into 27 categories belonging to three major categories. The use category that contained the most plant species was edible plants (62), followed by medicinal plants (32) and economic plants (22), and other uses (71). Plants with high CI included Allium prattii, Neopicrorhiza scrophulariiflora, Gymnadenia orchidis, Rhododendron anthopogon and Fritillaria cirrhosa. Thirty-six species of plants in the catalog of Gyirong and Yadong were the same, but only 17 species were the same in Gyirong and Burang. There were only 11 overlapping species between all the three regions.

CONCLUSION

Tibetans of Gyirong have rich and unique knowledge about plant use, and wild edible and medicinal plants play an important role in the nutrition and health protection of local people. However, traditional knowledge is slowly being lost and is being hit by modern tourism. In the future, more attention needs to be paid to the important role of traditional knowledge in biodiversity conservation.

The Nairobi fly in the Himalayas

The Nairobi fly has been sighted in the sub-Himalayan range with an outbreak of Paederus dermatitis in Nepal, Bhutan and north-eastern India in 2022. With increasing international travel and a warmer earth, tropical vectors in non-native regions are an emerging global health challenge.

Quantitative ethnoveterinary study on plant resource utilization by indigenous communities in high-altitude regions

For millennia, ethnic knowledge has been intricately tied to local biodiversity and woven into the fabric of rural communities. Growing scientific evidence suggests that merging ethnic knowledge with new scientific findings can lead to socially acceptable and environmentally friendly approaches essential for the long-term prosperity of local communities. In the high-altitude region, where livestock raising is a key income source, and plant-based utilization for ethno-veterinary practices is widely practiced. In this context, this study was conducted with the aim of documenting the ethno-veterinary use of plant resources in different bio-geographical regions of Jammu and Kashmir's Himalayas (J & KH). Semi-structured interviews and group discussions were used to collect information. Principal component analysis (PCA) and Pearson correlation were conducted to analyze the data. We documented 148 species from 53 families that locals used for various purposes: medicine, fodder, tonic, antidote, magic, and also used to protect themselves from ectoparasite such as Pediculus humanus capitis by the local inhabitants. There were significant differences in the relative usage of plant resources across the three biogeographic regions. Comparatively, the highest number (41%) of plant species were used for ethnoveterinary in the Jammu region, while the lowest number (28%) of species were used in Kashmir. Across the regions, Kashmir and Jammu had the highest level of species similarity (17%), while Jammu and Ladakh had the lowest (1%). A cross-regional assessment of plant resources revealed that 18% of plants were shared among the regions. The reported use of Amaranthus blitum, Morus alba, Ficus palmata, Vitex negundo, Juniperus semiglobosa, Ulmus wallichiana, and Rumex nepalensis are novel for the ethno-veterinary uses of this part of the Himalayan region. The various dry unique traditional fodder preparations (gaaslov, gass khor, pan baath, kaandbaath, Lovgooad, Karb, and Phungma) from plant resources are reported for the first time from the Himalayan region and can be ascribed to the novelty of this study. Plant resources were not only a source of fodder and medicine but also presented themselves as an opportunity for livelihood generation. Therefore, our findings bridge the knowledge gap by documenting key ethnoveterinary applications of native plant species from the study region that are used to cure livestock diseases and disorders by the mountain inhabitants.

Himalayan Microbiomes for Agro-environmental Sustainability: Current Perspectives and Future Challenges

The Himalayas are one of the most mystical, yet least studied terrains of the world. One of Earth's greatest multifaceted and diverse montane ecosystems is also one of the thirty-four global biodiversity hotspots of the world. These are supposed to have been uplifted about 60-70 million years ago and support, distinct environments, physiography, a variety of orogeny, and great biological diversity (plants, animals, and microbes). Microbes are the pioneer colonizer of the Himalayas that are involved in various bio-geological cycles and play various significant roles. The applications of Himalayan microbiomes inhabiting in lesser to greater Himalayas have been recognized. The researchers explored the applications of indigenous microbiomes in both agricultural and environmental sectors. In agriculture, microbiomes from Himalayan regions have been suggested as better biofertilizers and biopesticides for the crops growing at low temperature and mountainous areas as they help in the alleviation of cold stress and other biotic stresses. Along with alleviation of low temperature, Himalayan microbes also have the capability to enhance plant growth by availing the soluble form of nutrients like nitrogen, phosphorus, potassium, zinc, and iron. These microbes have been recognized for producing plant growth regulators (abscisic acid, auxin, cytokinin, ethylene, and gibberellins). These microbes have been reported for bioremediating the diverse pollutants (pesticides, heavy metals, and xenobiotics) for environmental sustainability. In the current perspectives, present review provides a detailed discussion on the ecology, biodiversity, and adaptive features of the native Himalayan microbiomes in view to achieve agro-environmental sustainability.

Phylogeographic analyses of an epiphytic foliose lichen show multiple dispersal events westward from the Hengduan Mountains of Yunnan into the Himalayas

Lobaria pindarensis is an endemic species of the Himalayas and the Hengduan Mountains. Little information is available on the phylogeography genetics and colonization history of this species or how its distribution patterns changed in response to the orographic history of the Himalayas and Hengduan Mountains. Based on samples covering a major part of the species' distribution range, we used 443 newly generated sequences of nine loci for molecular coalescent analyses in order to reconstruct the evolutionary history of L. pindarensis, and to reconstruct the species' ancestral phylogeographic distributions using Bayesian binary MCMC analyses. The results suggest that current populations originated from the Yunnan region of the Hengduan Mountains in the middle Pliocene, and that the Himalayas of Bhutan were colonized by a lineage that diverged from Yunnan ca. 2.72 Ma. The analysis additionally indicates that the Nepal and Xizang areas of the Himalayas were colonized from Yunnan as well, and that there was later a second dispersal event from Yunnan to Bhutan. We conclude that the change in climate and habitat related to the continuous uplift of the Himalayas and the Hengduan Mountains in the late Pliocene and middle Pleistocene influenced the geographic distribution pattern of L. pindarensis.

Hotspot and trend analysis of forest fires and its relation to climatic factors in the western Himalayas

Forest fire is one of the main issues of forest ecosystems around the world which has resulted in loss of biodiversity, forest degradation, soil erosion, and greenhouse gas emission. Ironically, the information on the forest fire regime and its pattern are still lacking in the Himalayan region. In this study, Moderate-Resolution Imaging Spectroradiometer active fire data products from 2001 to 2020 have been analysed for understanding the forest fire trends and its hotspots patterns during the active fire season (February to June). About 1347 average fire counts/year were recorded in six natural vegetations with the highest number of fires observed during the year 2012 (n = 3096) and minimum in 2011 (n = 210). Mann-Kendall trends analysis for the spatial and temporal pattern of fires indicated that there is a significant increase of forest fires towards higher elevation. Forest fire hotspot analysis using fire radiative power, fire frequency, and fire density showed that Uttarakhand is the most forest fire-prone state as compared to other north-western Himalayan states. It is also revealed that the May month has a higher number of fire counts and the evergreen needle forests have higher fire frequencies amongst the forest types. The forest fires were found to be more influenced by land surface temperature as compared to rainfall. The outcomes in this study on the temporal and spatial patterns for forest fire can be used for forest fire modelling.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s11069-022-05530-5.

A Review of Medicinal Plants of the Himalayas with Anti-Proliferative Activity for the Treatment of Various Cancers

Simple Summary

Drugs are used to treat cancer. Most drugs available in the market are chemosynthetic drugs and have side effects on the patient during and after the treatment, in addition to cancer itself. For instance, hair loss, loss of skin color and texture, loss of energy, nausea, infertility, etc. To overcome these side effects, naturally obtained drugs from medicinal plants are preferred. Our review paper aims to encourage the study of anticancer medicinal plants by giving detailed information on thirty-three medicinal plants and parts that constitute the phytochemicals responsible for the treatment of cancer. The development of plant-based drugs could be a game changer in treating cancer as well as boosting the immune system.

Abstract

Cancer is a serious and significantly progressive disease. Next to cardiovascular disease, cancer has become the most common cause of mortality in the entire world. Several factors, such as environmental factors, habitual activities, genetic factors, etc., are responsible for cancer. Many cancer patients seek alternative and/or complementary treatments because of the high death rate linked with cancer and the adverse side effects of chemotherapy and radiation therapy. Traditional medicine has a long history that begins with the hunt for botanicals to heal various diseases, including cancer. In the traditional medicinal system, several plants used to treat diseases have many bioactive compounds with curative capability, thereby also helping in disease prevention. Plants also significantly contributed to the modern pharmaceutical industry throughout the world. In the present review, we have listed 33 medicinal plants with active and significant anticancer activity, as well as their anticancer compounds. This article will provide a basic set of information for researchers interested in developing a safe and nontoxic active medicinal plant-based treatment for cancer. The research will give a scientific foundation for the traditional usage of these medicinal herbs to treat cancer.

Melting Himalayas and mercury export: Results of continuous observations from the Rongbuk Glacier on Mt. Everest and future insights

Glaciers in the Himalayan region have been receding rapidly in recent decades, drawing increasing concerns about the release of legacy pollutants (e.g., mercury (Hg)). To investigate the distribution, transport and controlling factors of Hg in glacier-fed runoff, from June 2019 to July 2020, a continuous monitoring and an intensive sampling campaign were conducted in the Rongbuk Glacier-fed basin (RGB) on the north slope of Mt. Everest in the middle Himalayas. The total Hg (THg) and methyl Hg (MeHg) concentrations were 1.56 ± 0.85 and 0.057 ± 0.025 ng/L, respectively, which were comparable to the global background levels and were mainly affected by the total suspended particulate matter (TSP). In addition, THg and MeHg showed significant diurnal variations, with peak values appearing at approximately 17:00 (upstream) and 19:00 (downstream). Based on the annual runoff and average Hg concentration, the annual export fluxes of THg and MeHg were estimated to be 441 g and 16 g, respectively. The yields of THg and MeHg in the RGB were 1.6 and 0.06 μg/m²/year, respectively. Currently, the annual Hg export of meltwater runoff in the Himalayan region is approximately 337 kg/year. When flowing through the proglacial lake, the THg concentrations decreased by 32% and 15% in the proglacial lake water and in the outlet, respectively, indicating that proglacial lakes had a sedimentation effect on the Hg transport. The Hg export from meltwater runoff in the Himalayas will likely increase considering the meltwater runoff has been projected to increase in the future. Nonetheless, emerging proglacial lakes may exert ambiguous effects on the glacier exported Hg under changing climate. Proglacial lakes could lower the levels and amounts of Hg in the glacier runoff, whereas the outburst of proglacial lakes could lead to an instantaneous release of Hg stored in lake waters and sediments. Our analysis shed light on the environmental impact of glacier retreat in the Himalayas and highlighted the need for integrated monitoring and study of Hg in glacier runoff and glacial lakes.

Traditions for Future Cross-National Food Security-Food and Foraging Practices among Different Native Communities in the Western Himalayas

Simple Summary

Biological and cultural history is linked with neglected and underused species (NUS). Wild food plants and animals have been the focus of important investigations carried out around the world in recent decades, and it is seen as a key issue in the fight against hunger and malnutrition. In this study, we assessed the effect of geographical, political, social and economic scenarios of neighboring countries that have led to different food and foraging practices in the erstwhile princely state of Jammu and Kashmir. We recorded 209 species, broadly classified into plants (n = 152) and animals (n = 57), used by the local people from four biogeographic regions (Kashmir, Jammu, Azad Kashmir and Ladakh) of erstwhile princely state of Jammu and Kashmir. Among wild flora, 139 vascular plants and 13 mushrooms were used by the indigenous communities, whereas in the case of wild fauna, 14 mammals, 22 birds and 21 fishes were used. The Jammu and Kashmir regions showed greater similarity, whereas the least overlap was observed between the Jammu and Ladakh regions. A cross-cultural comparison of wild food resources showed that maximum overlapping was observed in plant resources, and minimum in animals between the four regions of the study area. The usage of different wild foods is also dependent on seasonality. Wild animals and birds are preferred as food in the winter season. However, in the warm months of the year, plants and fish were preferred during the summer season due to their easy accessibility, and they replace the requirement of animals during the warm months of the year. The results of the current study show that the geopolitical scenario in this region has also affected the usage of different animal and plant species for food in the historically unified region of Jammu and Kashmir. This is one of the first comprehensive studies that document the wild food heritage essential for future projects aimed at fostering conservation, environmental sustainability, food security and climate change.

Abstract

Traditional diets exist in all cultures and geographic regions, and they often represent healthy eating options. Traditional culinary preparations have, however, often undergone profound change, even in the isolated Himalayan region. Therefore, we adapted methods to identify traditional plant foraging activities to better understand their significance in food system sustainability, as well as to promote innovative local gastronomies. Information on wild food and foraging practices was gathered from varied ethnic groups such as Kashmiri, Gujjars, Pahari, Dogra, Bakarwal, Balti, Beda and Brokpa through interviews (n = 716) and group discussions (n = 67) in four bio-geographic regions of the Jammu and Kashmir Himalayas (J&KH). The data were subjected to ordination techniques (Principal Component Analysis) via R software Ver. 4.0.0. We documented 209 food species, of which 73% were plants and 27% animals, used by the inhabitants of four bio-geographic regions of J&KH. The highest number of food plant species was recorded in Indian Kashmir, followed by Jammu, Azad Kashmir and Ladakh (81, 65, 60 and 27 species, respectively), and the maximum number of animal species was reported in Indian Kashmir, followed by Azad Kashmir, Ladakh and Jammu (33, 21, 19 and 17 species, respectively). The Azad Kashmir and Indian Kashmir regions showed greater similarity, whereas the least overlap was observed between Kashmir and Ladakh. The PCA showed considerable variation between different regions, and specific groups of species were more related to one specific region than others. The reported uses of Abies pindrow, Acacia modesta, Bergenia ciliata, Bergenia stracheyi and Juglans regia among plants, and Jynx torquilla, Streptopelia orientalis and Tadorna ferruginea among animals, are novel for the gastronomy of this part of the Himalayan region. We also recorded for the first time from this region seven unique food preparations of wild animals. This study documented extensive traditional knowledge on the usage of wild species, and is the first scientific description of wild food species and their vernacular names in the Western Himalayas, Jammu and Kashmir. Our findings can contribute significantly to combating food insecurity by revitalizing and reconsidering the rich bio-cultural food heritage around which local traditional communities have developed their food systems.

Climate change impact on cryosphere and streamflow in the Upper Jhelum River Basin (UJRB) of north-western Himalayas

The critical significance of keeping the current information about the extent and dynamics of the cryosphere in the Himalayas cannot be understated. The climate of the Himalayas is vulnerable and interlinked with global-scale climate changes, and the hydrology of the region mainly depends on the cryosphere. This is the first study that has created glacier and glacier lake inventory that links the impact of cryosphere on streamflow to land system dynamic changes under the changing climate of the Upper Jhelum River Basin (UJRB) of the Kashmir Himalayan region. This study uses a series of satellite data (1980-2016) to assess the depletion of snow cover area (SCA), deglaciation, and dynamics of glacial lakes. Moreover, observational long-term hydrometeorological data were used to understand the variability in temperature, precipitation, and track changes of land system dynamics under depletion of streamflow. The results suggested an overall rise in temperature (T_Max = 0.05 ºC a^-1; T_Min = 0.02 ºC a^-1; T_avg = 0.06 ºC a^-1) and a decrease in precipitation (2.9 mm a^-1) between 1980 and 2016 with a significant increase in annual average temperature and decrease in annual precipitation at stations located at higher altitudes. The SCA showed a significantly decreasing (p < 0.01) trend in the glacierized sub-basins with an annual rate of decrease of -0.78% a^-1, -0.15% a^-1, -0.03% a^-1 -0.90% a^-1 for Lidder, Sindh, Vishow, and Rambiara sub-basins, respectively. The findings of this study reveal the high occurrence of glacier disintegration and deglaciation. During the period 2010-2016, a rapid rate of deglaciation was observed (18.34 ± 0.14 km²), followed by 1992-2000 (15.61 ± 0.13 km²). The average rate of retreat was observed to be 6.81 ± 1.5 m a^-1 with a total retreat of 267 ± 80 m during 1980-2016, which is higher than reported from surrounding mountain ranges in the Himalayas. The mapped 244 glacial and high-altitude lake inventory covers a total surface area of around 15 km², with 5.87 km² (40%) covered by 25 bedrock-dammed lakes. The glacial expansion and creation of new lakes are observed to be because of increasing glacier and snow melting between 1980 and 2016, which increases the risk of GLOF events in the future. The annual average discharge in UJRB significantly increased from 1991 to 1998 and was observed to be higher than the annual average of the respected gauge stations but shows significant depletion from 1998 onwards. The streamflow depletion under climate change is one of the reasons for land system dynamics in UJRB. The area under agriculture has decreased up to 63% with a massive expansion of built-up (399%), aquatic vegetation (523%), and plantation (765%) between 1992 and 2015.

An integrative method for identifying potentially dangerous glacial lakes in the Himalayas

Glacial lakes in the Himalayas are widely distributed. Since 1900, more than 100 glacial lake outburst floods (GLOFs) have originated in the region, causing approximately 7000 deaths and considerable economic losses. Identifying potentially dangerous glacial lakes (PDGLs) is considered the first step in assessing GLOF risks. In this study, a more thorough inventory of PDGLs was presented that included numerous small-sized glacial lakes (<0.1 km²) that were generally neglected in the Himalayas for decades. Moreover, the PDGL evaluation system was improved in response to several deficiencies, such as the selection of assessment factors, which are sometimes arbitrary without a solid scientific basis. We designed an optimality experiment to select the best combination of assessment factors from 57 factors to identify PDGLs. Based on the experiments on both drained and non-drained glacial lakes in the Sunkoshi Basin, eastern Himalayas, five assessment factors were determined to be the best combination: the mean slope of the parent glacier, the potential for mass movement into the lake, the mean slope of moraine dams, the watershed area, and the lake perimeter, corresponding to the GLOF triggers for ice avalanches, rockfalls and landslides, dam instability, heavy precipitation or other liquid inflows, and lake characteristics, respectively. We then applied the best combination of assessment factors to the 1650 glacial lakes with an area greater than 0.02 km² in the Himalayas. We identified 207 glacial lakes as very high-hazard and 345 as high-hazard. It is noteworthy that in various GLOF susceptibility evaluation scenarios with different assessment factors, weighting schemes, and classification approaches, similar results for glacial lakes with high outburst potential have been obtained. The results provided here can be used as benchmark data to assess the GLOF risks for local communities.

Molecular characterization of lipase from a psychrotrophic bacterium Pseudomonas sp. CRBC14

Lipases from Pseudomonas species are particularly useful due to their broader biocatalytic applications and temperature activity. In this study, we amplified the gene encoding wild-type cold-active lipase from the genome of psychrotrophic bacterium isolated from the Himalayan glacier. The isolated CRBC14 strain was identified as Pseudomonas sp. based on the 16S rRNA gene sequence. Lipase activity was determined by observing the hydrolysis zone on nutrient agar containing tributyrin (1%, v/v). The sequence analysis of cold-active lipase revealed a protein of 611 amino acids with a calculated molecular mass of 63.71 kDa. The three-dimensional structure of this lipase was generated through template-supported modeling. Distinct techniques stamped the model quality, following which the binding free energies of tributyrin and oleic acid in the complex state with this enzymatic protein were predicted through molecular mechanics generalized born surface area (MMGBSA). A relative comparison of binding free energy values of these substrates indicated tributyrin's comparatively higher binding propensity towards the lipase. Using molecular docking, we evaluated the binding activity of cold-active lipase against tributyrin and oleic acid. Our docking analysis revealed that the lipase had a higher affinity for tributyrin than oleic acid, as evidenced by our measurement of the hydrolysis zone on two media plates. This study will help to understand the bacterial diversity of unexplored Himalayan glaciers and the possible application of their cold-adapted enzymes.

Metagenome-assembled genomes recovered from the datasets of a high-altitude Himalayan hot spring Khirganga, Himachal Pradesh, India

Khirganga, a pristine hot spring that lies in the Parvati Valley within the Northern Himalayas characterised with unique white colour microbial mat and divine water with healing abilities. Here, we report 41 metagenome-assembled genomes (MAGs) reconstructed from the microbial mat, sediment and water samples of hot spring passed through Genome Standards Consortium (GSC) and Minimum Information of Metagenome-assembled Genome (MIMAG).

Arsenic fate in upper Indus river basin (UIRB) aquifers: Controls of hydrochemical processes, provenances and water-aquifer matrix interaction

Major river basins of the Himalayas contain a significant amount of arsenic (As) in the geological matrix, which tends to contaminate the groundwater at a local and regional scale. Although As enrichment in Quaternary deposits has been linked to primary provenances (Himalayan orogeny), limited studies have reported As enrichment in bedrock aquifers. In the present study, the hard rock and groundwater samples were collected across the upper Indus river basin (UIRB), Ladakh to assess the hydrogeochemical processes and environments responsible for As mobilization and release. The higher As concentrations were found in Khardung volcanics followed by Ophiolitic melange, Dras volcanics, Nindam sandstone, and Nindam Shale. The variability in As concentration among different rock samples is largely governed by the presence of felsic minerals and the type of magmatic setting. The groundwater is less mineralized, with moderate electrical conductivity (EC), and weakly acidic to alkaline in nature. The results indicated that mineral weathering, dissolution, and active cation exchange reactions have a strong influence on the major ion chemistry of the groundwater. Redox-sensitive processes are influencing the As mobilization and release under reducing environmental conditions. As in groundwater poses a serious threat to human health hence awareness is urgent towards achieving sustainable As mitigation globally. The study provided a significant dataset to better understand the processes and environmental conditions responsible for hydrogeochemical evolution, sources of solutes, and As mobilization and release in groundwater which will help in sustainable water resource management policies and ecosystem restoration across the Himalayas.

Deciphering the role of meteorological parameters controlling the sediment load and water discharge in the Sutlej basin, Western Himalaya

The Sutlej River basin of the western Himalaya (study area), owing to its unique geographical disposition, receives precipitation from both the Indian summer monsoon (ISM) and the Westerlies. The characteristic timing and intensity of the ISM and Westerlies, leaves a distinct footprint on the sediment load of the River. Analysis with the last forty years data, shows an increasing trend for temperature. While for precipitation during the same period, the Spiti watershed on the west has highest monthly accumulated precipitation with long term declining trend, in contrast to the other areas where an increasing trend has been observed. Thus, to probe the hydrological variability and the seasonal attributes, governed by the Westerlies and ISM in the study area, we analyzed precipitation, temperature, snow cover area (in %), discharge, suspended sediment concentration (SSC) and suspended sediment load (SSL) for the period 2004 - 2008. To accomplish the task, we used the available data of five hydrological stations located in the study area. Inter-annual shift in peak discharge during the monsoon period is controlled by the variation in precipitation, snow melt, glacier melt and temperature. Besides seasonal variability has been observed in generation of the sediments and its delivery to the river. Our analysis indicates, dominance of the Westerlies footprints in the hydrological parameters of the Spiti region, towards western part of the study area. While, it is observed that the hydrology of the Khab towards eastern part of the study area shows dominance of ISM. Further downstream, the hydrology of Nathpa station also shows dominance of ISM. It also emerged out that the snowmelt contribution to the River flow is mostly during the initial part, at the onset of the monsoon, while for rest and major part of the summer monsoon season, the River flow is augmented by the precipitation, glacial melt and some snow melt. We observed, that the SSC increases exponentially in response to increase in temperature and correlates positively with River discharge. The average daily SSL in the summer monsoon is many times more than that in the winter monsoon. The downstream decrease in steepness of the sediment rating curve is attributed to either a change in the River-sediment dynamics or on account of the anthropogenic forcing. The top 1% of the extreme summer monsoon events (only 4 events) in our study area contribute up to 45% of SSL to the total sediment load budget. It has also been observed that the River-sediment dynamics in the upstream catchments are more vulnerable and sensitive to the extreme events in comparison to the downstream catchments. The present study for the first time gives a holistic insight in to the complex dynamics of the hydrological processes operational in the study area. The research findings would be crucial for managing the water resources of the region and the linked water and food security.

Species Distribution Pattern and Their Contribution in Plant Community Assembly in Response to Ecological Gradients of the Ecotonal Zone in the Himalayan Region

The ecotonal zones support populations that are acclimated to changing, fluctuating, and unstable conditions, and as a result, these populations are better equipped to adjust to expected change. In this context, a hypothesis was tested that there must be vegetation dominated by unique indicator plant species under the influence of ecological gradients in the ecotonal zone of Manoor Valley (northwestern Himalaya), Pakistan. Keeping the aforementioned hypothesis in mind, detailed field studies were conducted during different seasons in 2015-18. Line transect sampling and phytosociological characteristics (density, frequency, cover, and their relative values and Importance Value) were implemented as ecological methods. This investigation documented 97 plant species recorded from seven sampling sites. The community distribution modelling revealed that the ecological variables separate the seven sampling sites into two major plant communities (Indigofera-Parrotiopsis-Bistorta and Ziziphus-Leptopus-Quercus) recognized by TWINSPAN. The IBP communities showed a positive and significant correlation with altitude (1789.6-1896.3 m), sandy soil texture with a slightly acidic pH (6.4-6.5), and higher phosphorous (9-13 mg kg^-1). In contrast with this, the ZLQ community was recognized on the southern slope under the strong influence of high electrical conductivity (2.82-5.4 dsm^-1), organic matter (1.08-1.25%), calcium carbonate (5.8-7.6 mg kg^-1), potassium (202-220 mg kg^-1), and temperature (28.8-31.8 °C). Hence, both communities were found on opposite axes with clear differences based on the ecological gradients. NMDS clustered different species with similar habitats and different stands with common species, showing that plant species and stands were in a linear combination with ecological gradients. The IPB community has the maximum number of plant species (87 species), Shannon value (H' = 4), Simpson value (0.98), and Pielou's evenness value (0.96). Thus, the multivariate approaches revealed unique vegetation with sharp boundaries between communities which might be due to abrupt environmental changes.

Mercury distribution in the East Himalayas: Elevational patterns in soils and non-volant small mammals

Mercury (Hg), as a global pollutant, its contamination has been documented in environmental compartments of the Himalayan region. However, little research exists regarding to Hg accumulation in terrestrial wildlife, as well as its driving factors. In this study, surface soil and small mammals were collected in the Lebu Valley, East Himalayas of China, in order to measure the uptake of the long-distance transported Hg along an elevational gradient approximately from 2300 to 5000 m a.s.l. The soil Hg concentrations were measured and predicted mostly by vegetation type as well as soil organic matter, while the Hg in hair of small mammals (Muridae and Cricetidae) showed deeply influenced by soil Hg. Notably, combined with the field survey data, soil and hair Hg were both enhanced in low and mid-elevations, which overlapped the distribution ranges of a majority of mammals. Overall, this indicates that Hg contamination in low- and mid-elevations poses a potential threat to the top predators that consuming small mammals directly or indirectly. Furthermore, our data advances the understanding of Hg dynamics in remote, high mountain ecosystems and provides baseline data for biomonitoring for reduction of Hg emission globally.

Exploring potentialities of avian genomic research in Nepalese Himalayas

Nepal, a small landlocked country in South Asia, holds about 800 km of Himalayan Mountain range including the Earth's highest mountain. Within such a mountain range in the north and plain lowlands in the south, Nepal provides a habitat for about 9% of global avian fauna. However, this diversity is underrated because of the lack of enough studies, especially using molecular tools to quantify and understand the distribution patterns of diversity. In this study, we reviewed the studies in the last two decades (2000‒2019) that used molecular methods to study the biodiversity in Nepal to examine the ongoing research trend and focus. Although Nepalese Himalaya has many opportunities for cutting-edge molecular research, our results indicated that the rate of genetic/genomic studies is much slower compared to the regional trends. We found that genetic research in Nepal heavily relies on resources from international institutes and that too is mostly limited to research on species monitoring, distribution, and taxonomic validations. Local infrastructures to carry out cutting-edge genomic research in Nepal are still in their infancy and there is a strong need for support from national/international scientists, universities, and governmental agencies to expand such genomic infrastructures in Nepal. We particularly highlight avian fauna as a potential future study system in this region that can be an excellent resource to explore key biological questions such as understanding eco-physiology and molecular basis of organismal persistence to changing environment, evolutionary processes underlying divergence and speciation, or mechanisms of endemism and restrictive distribution of species.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1186/s40657-021-00290-5.

In vitro anticancer activity of extracted oil from Parrotiopsis jacquemontiana (Decne) Rehder

BACKGROUND

Parrotiopsis jacquemontiana, commonly referred to as "Beranj" in the local community, is widely used traditionally and has numerous health benefits. However, no studies have been conducted to investigate its anticancer potential, particularly its extracted oil.

PURPOSE

The present study was put forth to appraise the anticancer potential of Parrotiopsis jacquemontiana extracted oil against liver (hcclm3 and hepg2) and breast cancer (mda-mb 231 and mcf-7) cell lines relative to normal cell lines (lo2 and mcf-10a) via MTT assay.

METHODS

Flow cytometry indicated the apoptotic effect whereas invasion and migration capabilities of oil against cancer cells were determined by Matrigel invasion chamber and wound-scratch assays.

RESULTS

The results of oil revealed a time and dose-dependent increase in cell proliferation inhibition, conferring to least IC50 shown against hcclm3 (144.9 ± 0.75 μg/ml) and mda-mb 231 (145.7 ± 0.32 μg/ml) cell line at 72 h, whereas no cytotoxic effect on normal cells was observed. In addition, the oil significantly (p < 0.001) suppressed the migration and invasion of hcclm3 and mda-mb 231 cells, showing noteworthy anti-metastatic potential. Furthermore, cell death was confirmed by Annexin‒V/PI staining where the maximum apoptotic percentage was calculated for oil (200 μg/ml) alongside mda-mb 231 conferring to 15.36 ± 1.22, 26.7 ± 1.2, and 36.43 ± 1.65 at 24, 48, and 72 h whereas 12.33 ± 1.05, 19.36 ± 1.62, and 29.3 ± 0.79 was recorded alongside hcclm3 at similar time intervals, respectively.

CONCLUSION

In conclusion, the extracted oil exhibited strong anti-proliferative, anti-metastatic, and apoptotic effects and therefore may have potential applications in cancer treatment, however, further studies of oil regarding the action mechanisms and compounds involved in anticancer therapy are necessary.

De novo Assembly, Annotation, and Analysis of Transcriptome Data of the Ladakh Ground Skink Provide Genetic Information on High-Altitude Adaptation

The Himalayan Arc is recognized as a global biodiversity hotspot. Among its numerous cryptic and undiscovered organisms, this composite high-mountain ecosystem harbors many taxa with adaptations to life in high elevations. However, evolutionary patterns and genomic features have been relatively rarely studied in Himalayan vertebrates. Here, we provide the first well-annotated transcriptome of a Greater Himalayan reptile species, the Ladakh Ground skink Asymblepharus ladacensis (Squamata: Scincidae). Based on tissues from the brain, an embryonic disc, and pooled organ material, using pair-end Illumina NextSeq 500 RNAseq, we assembled ~77,000 transcripts, which were annotated using seven functional databases. We tested ~1600 genes, known to be under positive selection in anurans and reptiles adapted to high elevations, and potentially detected positive selection for 114 of these genes in Asymblepharus. Even though the strength of these results is limited due to the single-animal approach, our transcriptome resource may be valuable data for further studies on squamate reptile evolution in the Himalayas as a hotspot of biodiversity.

A Quantitative Assessment and Biomagnification of Mercury and Its Associated Health Risks from Fish Consumption in Freshwater Lakes of Azad Kashmir, Pakistan

Issues regarding biomagnification of mercury (Hg) due to its persistence, bioaccumulation, and toxicity in freshwater lakes have gained much attention in the last two decades especially in remote regions of the world where anthropogenic inputs are considered as negligible. In this study, spatial distribution of total mercury (THg), interspecific accumulation patterns, trophic transfer, and associated health risks in fish of freshwater lakes (357-3107 masl) in Azad Kashmir, Pakistan, were investigated. THg concentrations in the regions were 0.20 ± 0.08 μg g^-1 in glacial, 0.54 ± 0.21 μg g^-1 in rural, and 1.35 ± 0.46 μg g^-1 in urban region. Omnivorous, herbivorous, and carnivorous fish showed THg concentrations of 0.94, 0.85, and 0.49 μg g^-1. Regional, lake, trophic level, and specie-specific differences of THg accumulation were found significant in the study. Among growth parameters, length and age varied significantly among species, trophic levels, and lakes, whereas weight showed significant variation among lakes as well. Condition factor (K) showed significant differences within species, lakes, and trophic levels. Biomagnification was observed in all lakes with the trophic magnification slopes (TMS) ranging from 0.03 to 0.20 with an average of 0.094 ± 0.07. Isotopic values of nitrogen (δ¹⁵N) and condition factor were found to dominate THg accumulation trends; however, no significant health risks were found in the study.

Genomic basis of high-altitude adaptation in Tibetan Prunus fruit trees

The Great Himalayan Mountains and their foothills are believed to be the place of origin and development of many plant species. The genetic basis of adaptation to high plateaus is a fascinating topic that is poorly understood at the population level. We comprehensively collected and sequenced 377 accessions of Prunus germplasm along altitude gradients ranging from 2,067 to 4,492 m in the Himalayas. We de novo assembled three high-quality genomes of Tibetan Prunus species. A comparative analysis of Prunus genomes indicated a remarkable expansion of the SINE retrotransposons occurred in the genomes of Tibetan species. We observed genetic differentiation between Tibetan peaches from high and low altitudes and that genes associated with light stress signaling, especially UV stress signaling, were enriched in the differentiated regions. By profiling the metabolomes of Tibetan peach fruit, we determined 379 metabolites had significant genetic correlations with altitudes and that in particular phenylpropanoids were positively correlated with altitudes. We identified 62 Tibetan peach-specific SINEs that colocalized with metabolites differentially accumualted in Tibetan relative to cultivated peach. We demonstrated that two SINEs were inserted in a locus controlling the accumulation of 3-O-feruloyl quinic acid. SINE1 was specific to Tibetan peach. SINE2 was predominant in high altitudes and associated with the accumulation of 3-O-feruloyl quinic acid. These genomic and metabolic data for Prunus populations native to the Himalayan region indicate that the expansion of SINE retrotransposons helped Tibetan Prunus species adapt to the harsh environment of the Himalayan plateau by promoting the accumulation of beneficial metabolites.