Genome-wide DNA methylation changes in Oryzias melastigma embryos exposed to the water accommodated fraction of crude oil

The water accommodated fraction (WAF) of crude oil exerts considerable impacts on marine fish during embryonic stage. Clarifying changes in epigenetic modifications is helpful for understanding the molecular mechanism underlying the toxicity of embryonic WAF exposure. The aim of this study was to explore genome-wide DNA methylation changes in Oryzias melastigma embryos after exposure to the nominal total petroleum hydrocarbon concentration of 500 μg/L in WAF for 7 days. Whole-genome bisulfite sequencing revealed that 8.47 % and 8.46 % of all the genomic C sites were methylated in the control and WAF-exposed groups, respectively. Among the three sequence contexts, methylated CG site had the largest number in both the two groups. The sequence preferences of nearby methylated cytosines were consistent between the two groups. A total of 4798 differentially methylated regions (DMRs) were identified in the promoter region. Furthermore, Gene Ontology analysis revealed that DMR-related genes were enriched mainly for functions related to development and nervous system. Additionally, the Kyoto Encyclopedia of Genes and Genomes pathways enriched in DMR-related genes were related to nervous system and endocrine system. These novel findings provide comprehensive insights into the genome-wide DNA methylation landscape of O. melastigma following embryonic WAF exposure, shedding light on the epigenetic regulatory mechanisms underlying WAF-induced toxicity.

Sustainable polyurethane for the remediation of oil spills: a review

Catastrophic oil spill is one of the major issues to the environment. Various methods have been used to treat oil spillage including in situ burning, the use of skimmers, dispersants, bioremediation, dispersing agents, oil sorbents, and biological agents. Application of oil sorbent is one of the effective solutions in oil spill clean-up. Polymers are sustainable extraordinary materials for the treatment of oil spillage due to their special physicochemical characteristics such as high porosity, good hydrophobicity, and reusability. Polymers are modified using suitable chemical reagents and their hydrophobicity is enhanced, making them suitable for oil spill clean-up. The present manuscript is an attempt to summarize the study of chemical modifications done on a polymer polyurethane (PU) for achieving the desirable properties, for efficient oil spill clean-up. A patent analysis has been carried out for the leading countries, top inventors, leading assignees, trends of patent publications, citation analysis, and summary of granted patents in the area of the use of a polymer Polyurethane (PU) for oil spill clean-up.

Marine oil spill photodegradation: Laboratory simulation, affecting factors analysis and kinetic model development

Photodegradation significantly influences marine oil spill behavior, yet its role remains underrepresented in current models, impairing predictive accuracy. Addressing this, our study rigorously examined oil properties and environmental determinants affecting marine oil spill photodegradation through laboratory simulations. We identified and quantified key factors and their interactions, noting particularly the positive influence of asphaltene and negative implications of oil density. We also discerned a negative correlation between n-alkane degradation and carbon numbers. Our findings underscored the pivotal roles of temperature and irradiance in photodegradation. All tested oils adhered to first-order kinetics, with rate constants ranging from 0.0348 to 0.0645 day-1. Finally, we introduced a novel model incorporating temperature, irradiance and their interactions, ensuring reasonable simulations for marine oil spill photodegradation, fortifying marine oil spill management strategies.

Sustainability and capability-based assessment of marine oil spill response technologies using a decision support system under decomposed fuzzy set

Marine oil spills are a practically challenging environmental occurrence to remediate. The critical stage of managing marine oil spills is choosing an appropriate response technology. This research implements a novel sustainability and capability policy-oriented decision support system (DSS) and the decomposed fuzzy set-based ORESTE model. First, an integrated criteria system on the basis of the sustainability and capability aspects is employed by considering four social, environmental, economic, and capability dimensions. Second, the ORESTE model under the decomposed fuzzy environment is extended to deal with the uncertainty data, evaluate the conflicts between the candidate alternatives, and choose the optimal scenario. Seven technologies of bioremediation, solidifiers, dispersants, adsorbents, in situ burning, booms, and skimmers for remediating oil spills in the Persian Gulf, Iran, have been assessed. The assessment results indicate that the bioremediation technology is the optimal scenario for the oil spill-contaminated sites management and the suggested DSS is feasible and applicable.

Applications of bubble curtains in marine oil spill containment: Hydrodynamic characteristics, applications, and future perspectives

Although the marine oil spill pollution issue does not bring us to flock in droves as the new emerging oceanic techniques like wave energy converters, remote operated vehicle (ROV), blue ammonia and green hydrogen, the huge pollution risks of the marine oil spills caused by man-made intentional discharge, old equipment, accidental leakage, war and other aspects should arouse our sufficient attention and concern. As the primary countermeasure of emergency response to a marine oil spill, rapid & efficient oil containment is crucial to limit the pollution scope and the subsequent recovery and treatment. Here, we summarized the existing investigations on oil-spill containment with a marked emphasis on the applications of bubble curtains and their working mechanisms. The critical research progress and trends about the remediation techniques and the application of bubble curtains in marine environments were briefly introduced. The article thoroughly analyzed the basic working mechanism of the bubble curtains in oil spill containment, the technical difficulties of the existing methods, the potential application prospects of coupling with the traditional oil containment booms and the critical scientific problems to be studied in the future. Regarding the issues involving insufficient oil retention performance and inconvenient deployment of the existing traditional oil boom under complex and variable sea conditions, the performance and structural optimization of bubble curtain enhanced oil containment boom will get the top priority in developing the next-generation oil containment techniques.

Biodegradation potential of residue generated during the in-situ burning of oil in the marine environment

The biodegradability of residues derived from in-situ burning, an oil spill response strategy which involves burning an oil slick on the sea surface, has not yet been fully studied. With a growing risk of oil spills, the fate of the persistent burn residue containing potentially toxic substances must be better understood. Microcosms were used to study the microbial community response and potential biodegradability of in-situ burn residues generated from Ultra Low Sulphur (ULS) marine diesel. Microcosm studies were conducted using residues originating from the burning of unweathered and weathered diesel, with the addition of a fertilizer and a dispersant. Burn residues were incubated for 6 weeks at 7 °C in natural seawater with continual agitation in the dark. Samples were subsequently sacrificed for chemistry as well as 16S rRNA gene amplicon and shotgun metagenomic sequencing. Chemistry analyses revealed a reduction in hydrocarbon concentrations. Medium chain-length n-alkanes (nC₁₆-nC₂₄) decreased by 8% in unweathered burn residue microcosms and up to 26% in weathered burn residue microcosms. A significant decrease in polycyclic aromatic hydrocarbon (PAH) concentrations was observed only for naphthalene, fluorene and their alkylated homologs, in the microcosms amended with residue produced from burning weathered diesel. Decreases of 2-24%, were identified depending on the compound. Microcosms amended with burn residues had distinct microbial communities marked by an increase in relative abundance of putative hydrocarbon degraders as well as an increase of known hydrocarbon-degradation genes. These novel results suggest that if in-situ burning is performed on ULS marine diesel, some of the indigenous bacteria would respond to the newly available carbon source and some of the residual compounds would be biodegraded. Future studies involving longer incubation periods could give a better understanding of the fate of burn residues by shedding light on the potential biodegradability of the more recalcitrant residual compounds.

Responses of Alcanivorax species to marine alkanes and polyhydroxybutyrate plastic pollution: Importance of the ocean hydrocarbon cycles

Understanding microbial responses to hydrocarbon and plastic pollution are crucial for limiting the detrimental impacts of environmental contaminants on marine ecosystems. Herein, we reported a new Alcanivorax species isolated from the North Atlantic Ocean capable of degrading alkanes and polyhydroxybutyrate (PHB) plastic (one of the emerging bioplastics that may capture the future plastic market). The whole-genome sequencing showed that the species harbors three types of alkane 1-monooxygenases (AlkB) and one PHB depolymerase (PhaZ) to initiate the degradation of alkanes and plastics. Growth profiling demonstrated that n-pentadecane (C15, the main alkane in the marine environment due to cyanobacterial production other than oil spills) and PHB could serve as preferential carbon sources. However, the cell membrane composition, PhaZ activity, and expression of three alkB genes were utterly different when grown on C15 and PHB. Further, Alcanivorax was a well-recognized alkane-degrader that participated in the ocean hydrocarbon cycles linking with hydrocarbon production and removal. Our discovery supported that the existing biogeochemical processes may add to the marine ecosystem's resilience to the impacts of plastics.

Emerging bio-dispersant and bioremediation technologies as environmentally friendly management responses toward marine oil spill: A comprehensive review

Marine oil spills emanating from wells, pipelines, freighters, tankers, and storage facilities draw public attention and necessitate quick and environmentally friendly response measures. It is sometimes feasible to contain the oil with booms and collect it with skimmers or burn it, but this is impracticable in many circumstances, and all that can be done without causing further environmental damage is adopting natural attenuation, particularly through microbial biodegradation. Biodegradation can be aided by carefully supplying biologically accessible nitrogen and phosphorus to alleviate some of the microbial growth constraints at the shoreline. This review discussed the characteristics of oil spills, origin, ecotoxicology, health impact of marine oils spills, and responses, including the variety of remedies and responses to oil spills using biological techniques. The different bioremediation and bio-dispersant treatment technologies are then described, with a focus on the use of green surfactants and their advances, benefits/drawbacks. These technologies were thoroughly explained, with a timeline of research and recent studies. Finally, the hurdles that persist as a result of spills are explored, as well as the measures that must be taken and the potential for the development of existing treatment technologies, all of which must be linked to the application of integrated procedures.

Recent advances in chemical and biological degradation of spilled oil: A review of dispersants application in the marine environment

Growing concerns over the risk of accidental releases of oil into the marine environment have emphasized our need to improve both oil spill preparedness and response strategies. Among the available spill response options, dispersants offer the advantages of breaking oil slicks into small oil droplets and promoting their dilution, dissolution, and biodegradation within the water column. Thus dispersants can reduce the probability of oil slicks at sea from reaching coastal regions and reduce their direct impact on mammals, sea birds and shoreline ecosystems. To facilitate marine oil spill response operations, especially addressing spill incidents in remote/Arctic offshore regions, an in-depth understanding of the transportation, fate and effects of naturally/chemically dispersed oil is of great importance. This review provides a synthesis of recent research results studies related to the application of dispersants at the surface and in the deep sea, the fate and transportation of naturally and chemically dispersed oil, and dispersant application in the Arctic and ice-covered waters. Future perspectives have been provided to identify the research gaps and help industries and spill response organizations develop science-based guidelines and protocols for the application of dispersants application.

A review on physical remediation techniques for treatment of marine oil spills

There is a huge risk of contamination of water bodies due to the various oil exploration, transport, and industrial operational activities that are taking place across the world. Physical remediation techniques are considered extremely important for tackling the problems of marine oil spills. This paper provides a unique, specific review on the physical remediation of marine oil spills with special emphasis on types of available physical remediation techniques and their working principles. It also describes the chief latest improvements in the physical remediation techniques that have taken place with time. The paper discusses the various ways by which oil and its derivatives contaminate, and the subsequent effects these contaminants have on the marine ecosystem. The article discusses salient features that make physical remediation an effective marine oil spill counter-measure capable of recovering appreciable amounts of oil while causing minimal or no damage to the marine ecosystem and the workers carrying out the cleanup. Regarding the physical remediation methods, future research may focus on the development of hybrid booms, improved performance of skimmers for different oil types, and further applications involving novel materials like nanoparticles, zeolites for sorbents.

The effect of pressure variation on droplet size distribution of dispersed oil under simulated deep-water conditions

Droplet size distribution of dispersed oil in deep-water is critical to the transport and biodegradation of spilled oil in deep-sea. Few studies have focused on the effects of pressure on chemically dispersed oil through experiments. This study thus simulated how the crude oil homogenously pre-dispersed by Corexit 9500A using baffled flasks would behave after being exposed to deep-water conditions. Key factors included dispersant-to-oil ratio (DOR), mixing energy (energy dissipation rate and Kolmogorov microscale), and pressure (up to 150 bar). The variations of pressure were demonstrated to have insignificant effects on the size distribution of pre-dispersed oil. Both the average and medium droplet sizes were correlated negatively with DOR and mixing energy in an established model with a p-value ≤ 0.0011. The log-normal and log-logistic distributions provided a reasonable fit to simulate the droplet size distribution. The two parameters of log-logistic distribution were dependent on DOR and mixing energy with a p-value < 0.005. The results would be valuable to advance the understanding of the behaviours and trajectories of chemically dispersed oil under deep-water conditions. The research helped provide more scientific evidence to improve the understanding of dispersed oil behaviours under high pressure and support deep-sea oil spill research and potential extension of the existing results from shallow water to deep water conditions.

Solid inoculants as a practice for bioaugmentation to enhance bioremediation of hydrocarbon contaminated areas

Vacuum freeze-drying is a scientifically advanced method to prepare solid inoculants from oil degrading bacterium. The introduction of oil-degrading microbes or bioaugmentation can be an efficient way to bioremediate oil spills in marine areas, where oil-degrading bacteria are deficient. The purpose of this study is to evaluate the potential use of solid inoculants of LZ-2 bacteria to enhance the degradation rate of crude oil. In this study, response surface methodology (RSM) was incorporated into the experimental design to optimize a response, which is influenced by different protectants. Our results showed that five factors have interactive and synergistic protective effects on the growth of LZ-2. Optimal growth of freeze-dried LZ-2 (63.8%) was observed with a 10.5% solution of skim milk supplemented with 14.3% sucrose, 14.4% of trehalose, 4.9% of glycerin and 14.7% of β-cyclodextrin. The culture grew in medium containing crude oil (3 g L^-1) at 37 °C at 150 rpm for 30 d, GC and GC-MS analysis showed biodegradation of 44.2 and 21.6% for total saturate and aromatic hydrocarbons respectively. These results indicated that the solid inoculants of LZ-2 bacteria had the potential to be used for ex-situ bioremediation of hydrocarbon pollutants associated with crude oil.

Variation of Microbial Diversity in Catastrophic Oil Spill Area in Marine Ecosystem and Hydrocarbon Degradation of UCMs (Unresolved Complex Mixtures) by Marine Indigenous Bacteria

The study targeted an assessment of microbial diversity during oil spill in the marine ecosystem (Kaohsiung port, Taiwan) and screened dominant indigenous bacteria for oil degradation, as well as UCM weathering. DO was detected lower and TDS/conductivity was observed higher in oil-spilled area, compared to the control, where a significant correlation (R² = 1; P < 0.0001) was noticed between DO and TDS. The relative abundance (RA) of microbial taxa and diversities (> 90% similarity by NGS) were found higher in the boundary region of spilled-oily-water (site B) compared to the control (site C) and center of the oil spill area (site A) (B_RA/diversity > C_RA/diversity > A_RA/diversity). The isolated indigenous bacteria, such as Staphylococcus saprophyticus (CYCTW1), Staphylococcus saprophyticus (CYCTW2), and Bacillus megaterium (CYCTW3) degraded the C₁₀-C₃₀ including UCM of oil, where Bacillus sp. are exhibited more efficient, which are applicable for environmental cleanup of the oil spill area. Thus, the marine microbial diversity changes due to oil spill and the marine microbial community play an important role to biodegrade the oil, besides restoring the catastrophic disorders through changing their diversity by ecological selection and adaptation process.

Time- and compound-dependent microbial community compositions and oil hydrocarbon degrading activities in seawater near the Chinese Zhoushan Archipelago

Marine microorganisms play an irreplaceable role in removing spilled oil. Zhoushan archipelago has one of the busiest ports and oil stockpiles in China. However, little is known about which and how fast oil-degrading microorganisms could biodegrade spilled oil here. By combining ¹⁴C-/³H-based radiotracer assays and MiSeq sequencing, we report the successive pattern of microbial oil-degrading activities and community compositions. The biodegradation rates of alkanes and PAHs (Polycyclic Aromatic Hydrocarbons) were significantly stimulated by oil addition, and reached their maximum after incubation for 3 and 7 days, respectively. Meanwhile, the abundances of alkB and phnAc genes increased and the bacterial communities continuously shifted. Potential oil-degrading bacteria Alcanivorax, Erythrobacter were the dominant degraders by day 3, whereas the dominant degraders shifted to C1-B045, Alteromonas, Pseudohongiella in the later period. These results provide valuable insights into the cooperative system of the versatile oil-degrading bacteria in successively biodegrading complex oil hydrocarbons in oil spills.

Performance of a simple backtracking method for marine oil source searching in a 3D ocean

Performance of a simple backtracking method in searching for a potential spill source for offshore detected oil is investigated through a series of idealized numerical experiments, in which either sea surface source in a 2D case or underwater source in a 3D case is considered. Numerical result shows that, generally, backtracking time is an important input for 2D version of the backtracking method, whereas an accurate ocean dynamic background and an accurate field measurement of oil droplet size are crucial for 3D version. Reducing the uncertainty in oil detection site or accurately measuring the oil droplet size can effectively improve the efficiency of method implementation. External information like satellite images, offshore oil facilities and navigation information is helpful for improving the method efficiency.

Experimental studies on the enhanced performance of lightweight oil recovery using a combined electrocoagulation and magnetic field processes

On marine oil spill, inflammable lightweight oil has characteristics of explosion risk and contamination of marine enviroment, therefore treatment of stable emulsion with micron oil droplets is urgent. This study aimed to propose a combined electrocoagulation and magnetic field processes to enhance performance of lightweight oil recovery with lower energy consumption. The effects of current density, electrolysis time, strength and direction of magnetic field on the overall treatment efficiency of the reactor were explored. Furthermore, the comparison between coupling device and only electrocoagulation through tracking oil removal in nine regions between the electrodes. The results were shown that the permanent magnets applied was found to enhance demulsification process within electrocoagulation reactor. For a given current density of 60 A m^-2 at 16 min, Lorentz force downward was proved to promote the sedimentation of coagulants. As the magnetic field strength increases from 20 to 60 mT, oil removal efficiency was observed to increase and then decrease, and simultaneously energy consumption reduced and then present constantly. The results were found that the magnetic field strength of 40 mT was optimal within electrocoagulation reactor, which can not only diminishe difference of mass transfer rate along the height of vertical plate but also consume lowest energy.

Comparative embryotoxicity of phenanthrene and alkyl-phenanthrene to marine medaka (Oryzias melastigma)

Alkylated polycyclic aromatic hydrocarbons (alkyl-PAHs) are the predominant form of PAHs in oil, comprising 85-95% of total PAHs. However, little attention has been paid to these chemicals in ecological risk assessment of marine oil spill. A comparative study of the toxic effects of phenanthrene and retene (7-isopropyl-1-methylphenanthrene, an alkyl-phenanthrene) on the early life stage of marine medaka (Oryzias melastigma) was conducted. Results showed that retene was significantly more toxic than phenanthrene, and marine medaka could be more sensitive to retene than some freshwater fishes. Retene had a higher excretion rate than phenanthrene during the larvae stage. Both of compounds resulted in developmental malformation of marine medaka embryos, with phenanthrene affecting on peripheral vascular system and yolk sac, while retene affecting on cardiac tissues. The toxicity of phenanthrene might be mainly related to its anesthetic effects, and that of retene might be related to the CYP1A-mediated toxicity of its metabolites.