Structural framework for the understanding spectroscopic and functional signatures of the cyanobacterial Orange Carotenoid Protein families

The Orange Carotenoid Protein (OCP) is a unique photoreceptor crucial for cyanobacterial photoprotection. Best studied Synechocystis sp. PCC 6803 OCP belongs to the large OCP1 family. Downregulated by the Fluorescence Recovery Protein (FRP) in low-light, high-light-activated OCP1 binds to the phycobilisomes and performs non-photochemical quenching. Recently discovered families OCP2 and OCP3 remain structurally and functionally underexplored, and no systematic comparative studies have ever been conducted. Here we present two first crystal structures of OCP2 from morphoecophysiologically different cyanobacteria and provide their comprehensive structural, spectroscopic and functional comparison with OCP1, the recently described OCP3 and all-OCP ancestor. Structures enable correlation of spectroscopic signatures with the effective number of hydrogen and discovered here chalcogen bonds anchoring the ketocarotenoid in OCP, as well as with the rotation of the echinenone's β-ionone ring in the CTD. Structural data also helped rationalize the observed differences in OCP/FRP and OCP/phycobilisome functional interactions. These data are expected to foster OCP research and applications in optogenetics, targeted carotenoid delivery and cyanobacterial biomass engineering.

Investigation of the photoactivation effect of TiO2 onto carbon-clay paste electrode by cyclic voltammetry analysis

In this work, a cyclic voltammetry analysis for the detection of Ascorbic Acid (AA) based on a carbon-clay paste electrode modified with titanium dioxide (CPEA/TiO₂) is presented. The electrochemical sensor was prepared using clay and carbon graphite, mixed with TiO₂ to investigate the electrode behavior towards the detection of AA. Comprehensive characterization approaches including X-ray diffraction (XRD), Selected area electron diffraction (SAED), Transmission electron microscopy (TEM), Fourier transform infra-red spectroscopy (FTIR) were carried out on different samples. The results indicated that, the electrode has been effectively modified, while the electrochemical parameters of AA on CPEA/T_iO₂/UV such as the charge transfer coefficient (α _a ), number of electrons (n) transferred and standard potential were calculated. CPEA/TiO₂/UV exhibit better photoactivity and also higher electronic conductivity under light radiation (100 W). The linear range for AA was determined between 0.150μM and 0.850 μM with the straight-line equation equivalent to I p a ( μ A ) = 2.244 [ A A ] + 1.234 (n = 8, R² = 0.993). The limit of detection was 0.732 μM (3σ) and limit of quantification was 2.440 μM. For the analytical applications, pharmaceutical tablets such as Chloroquine phosphate, Azithromycin and Hydroxychloroquine sulfate were performed. In addition, interference study in the analytical application was performed, and it was found that the electroanalytical method used can be well adopted for simultaneous electrochemical detection of AA and Azithromycin.

Photochemical defense as trait of fungi from Cortinarius subgenus Dermocybe

The photobiological activity of ten colorful species belonging to subgenus Dermocybe of the basidiomycete genus Cortinarius was investigated. Extracts of all species produced singlet oxygen and are thus photoactive. Pigment analysis was performed and showed similarities of the anthraquinone pigments across the species in dependency to their respective pigmentation types. Detailed content analysis of the pigments in the whole agaricoid fruiting body compared to the three different tissue types (pileus, stipe, and lamellae) revealed that the pigments emodin, dermocybin, and dermorubin, as well as their respective glycosides, are enhanced in the gills. In an independent experiment, the gills were shown to be the most photoactive tissues of the fruiting body. Photobiological experiments with invertebrates (i.e., glassworm Chaoborus crystallinus) proved a phototoxic effect of the methanolic extract of the red blood webcap (Cortinarius sanguineus var. aurantiovaginatus). This work adds further evidence to a common photobiological trait in Cortinarius subgenus Dermocybe and underpins the possibility of a photochemical defense mechanism in fungi.

A primordial Orange Carotenoid Protein: Structure, photoswitching activity and evolutionary aspects

Cyanobacteria are photosynthesizing prokaryotes responsible for the Great Oxygenation Event on Earth ~2.5 Ga years ago. They use a specific photoprotective mechanism based on the 35-kDa photoactive Orange Carotenoid Protein (OCP), a promising target for developing novel optogenetic tools and for biomass engineering. The two-domain OCP presumably stems from domain fusion, yet the primitive thylakoid-less cyanobacteria Gloeobacter encodes a complete OCP. Its photosynthesis regulation lacks the so-called Fluorescence Recovery Protein (FRP), which in Synechocystis inhibits OCP-mediated phycobilisome fluorescence quenching, and Gloeobacter OCP belongs to the recently defined, heterogeneous clade OCPX (GlOCPX), the least characterized compared to OCP2 and especially OCP1 clades. Here, we describe the first crystal structure of OCPX, which explains unique functional adaptations of Gloeobacter OCPX compared to OCP1 from Synechocystis. We show that monomeric GlOCPX exploits a remarkable intramolecular locking mechanism stabilizing its dark-adapted state and exhibits drastically accelerated, less temperature-dependent recovery after photoactivation. While GlOCPX quenches Synechocystis phycobilisomes similar to Synechocystis OCP1, it evades interaction with and regulation by FRP from other species and likely uses alternative mechanisms for fluorescence recovery. This analysis of a primordial OCPX sheds light on its evolution, rationalizing renaming and subdivision of the OCPX clade into subclades - OCP3a, OCP3b, OCP3c.

Photocatalytic TiO2/CdS/ZnS nanocomposite induces Bacillus subtilis cell death by disrupting its metabolism and membrane integrity

Titanium dioxide (TiO₂) is widely characterized for its application in clinical diagnostics, therapeutics, cosmetics, nutrition, and environment management. Despite enormous potential, its dependence on ultraviolet (UV) light for photocatalytic activity limits its commercialization. Accordingly in the present study, a photo catalytically superior ternary complex of TiO₂ with Cadmium sulfide/Zinc sulfide (CdS/ZnS) has been synthesized, as well as, characterized for photo-induced antimicrobial activity. The band gap of crystalline TiO₂/CdS/ZnS nanocomposite has been reduced (2.26 eV) and nanocomposite has shown the optimal photo-activation at 590 nm. TiO₂ nanocomposite has significant bactericidal activity in visible light (P < 0.01). Exposure of the TiO₂ nanocomposite affected the cellular metabolism by altering the 1681 metabolic features (P < 0.001) culminating in poor cellular survivability. Additionally, photo-induced reactive oxygen species generation through nanocomposite disrupts the microbial cellular structure. The present study synthesized photocatalytic nanocomposite as well as unveiled the holistic cellular effect of theTiO₂/CdS/ZnS nanocomposite. Additionally, the present study also indicated the potential application of TiO₂/CdS/ZnS nanocomposite for sustainable environment management, therapeutics, and various industries.

Supplementary Information

The online version contains supplementary material available at 10.1007/s12088-021-00973-z.

Photoactive siderophores: Structure, function and biology

It is well known that bacteria and fungi have evolved sophisticated systems for acquiring the abundant but biologically inaccessible trace element iron. These systems are based on high affinity Fe(III)-specific binding compounds called siderophores which function to acquire, transport, and process this essential metal ion. Many hundreds of siderophores are now known and their numbers continue to grow. Extensive studies of their isolation, structure, transport, and molecular genetics have been undertaken in the last three decades and have been comprehensively reviewed many times. In this review we focus on a unique subset of siderophores that has only been recognized in the last 20 years, namely those whose iron complexes display photoactivity. This photoactivity, which typically results in the photooxidation of the siderophore ligand with concomitant reduction of Fe(III) to Fe(II), seemingly upsets the siderophore paradigm of forming and transporting only extremely stable Fe(III) complexes into microbial cells. Here we review their structure, synthesis, photochemistry, photoproduct coordination chemistry and explore the potential biological and ecological consequences of this photoactivity.

Solvent-Dependent Reactivity and Photochemistry of Dinuclear and Mononuclear Platinum(IV) Azido Triazaolato Complexes

Reaction between the platinum(IV) azido complex trans,trans,trans-[Pt(py)2(N3)2(OH)2] (1) and 1,4-diphenyl-2-butyne-1,4-dione 2 in MeCN produces the intermediate peroxide-bridged dimeric platinum(IV) azido triazolato species (5), which has been characterised by X-ray crystallography. However, if the reaction between 1 and 2 is conducted in MeOH it results in decomposition. Over time in MeCN, dimer (5) converts into mononuclear complexes trans,trans,trans-[Pt(py)2(N3)(triazole)(OH)2] (3 a/3 b), which are in dynamic exchange. If resuspended in protic solvents (MeOH,H2O), 3 a/3 b undergo a slow (22 d) irreversible rearrangement to a cyclised platinum(IV) species 4 which contains a formally N,O-chelated ligand. Conversion of 3 a/3 b to 4 in d 4-MeOH can be accelerated (384x) by irradiation with visible light, although continued irradiation also produces N3 . and OH. radicals, and the [4-N3]+ species can be readily detected by ESI-MS. Solvent choice significantly effects both the cycloaddition reaction between 1 and 2, and the stability of the resultant complexes.

Coverage Layer Phase Composition-Dependent Photoactivity of One-Dimensional TiO2-Bi2O3 Composites

TiO₂–Bi₂O₃ composite rods were synthesized by combining hydrothermal growth of rutile TiO₂ rod templates and sputtering deposition of Bi₂O₃ thin films. The TiO₂–Bi₂O₃ composite rods with β-Bi₂O₃ phase and α/β-Bi₂O₃ dual-phase decoration layers were designed, respectively, via in situ radio-frequency magnetron sputtering growth and post-annealing procedures in ambient air. The crystal structure, surface morphology, and photo-absorption performances of the pristine TiO₂ rods decorated with various Bi₂O₃ phases were investigated. The crystal structure analysis reveals that the crystalline TiO₂–Bi₂O₃ rods contained β-Bi₂O₃ and α/β-Bi₂O₃ crystallites were separately formed on the TiO₂ rod templates with different synthesis approaches. The morphology analysis demonstrates that the β-Bi₂O₃ coverage layer on the crystalline rutile TiO₂ rods showed flat layer morphology; however, the surface morphology of the α/β-Bi₂O₃ dual-phase coverage layer on the TiO₂ rods exhibited a sheet-like feature. The results of photocatalytic decomposition towards methyl orange dyes show that the substantially improved photoactivity of the rutile TiO₂ rods was achieved by decorating a thin sheet-like α/β-Bi₂O₃ coverage layer. The effectively photoinduced charge separation efficiency in the stepped energy band configuration in the composite rods made from the TiO₂ and α/β-Bi₂O₃ explained their markedly improved photoactivity. The TiO₂-α/β-Bi₂O₃ composite rods are promising for use as photocatalysts and photoelectrodes.

The photoactivity of natural products - An overlooked potential of phytomedicines?

BACKGROUND

Photoactivity, though known for centuries, is only recently shifting back into focus as a treatment option against cancer and microbial infections. The external factor light is the ingenious key-component of this therapy: Since light activates the drug locally, a high level of selectivity is reached and side effects are avoided. The first reported photoactive medicines were plant extracts. Synthetic entities (so-called photosensitizers PSs), however, paved the route towards the clinical approval of the so-called photodynamic therapy (PDT), and thus natural PSs took a backseat in the past.

HYPOTHESIS

Many isolated bioactive phytochemicals hold a hidden photoactive potential, which is overlooked due to the reduced common awareness of photoactivity.

METHODS

A systematic review of reported natural PSs and their supposed medicinal application was conducted by employing PubMed, Scifinder, and Web of Science. The identified photoactive natural products were compiled including information about their natural sources, their photoyield, and their pharmacological application. Furthermore, the common chemical scaffolds of natural PS are shown to enable the reader to recognize potentially overlooked natural PSs.

RESULTS

The literature review revealed over 100 natural PS, excluding porphyrins. The PSs were classified according to their scaffold. Thereby it was shown that some PS-scaffolds were analyzed in a detailed way, while other classes were only scarcely investigated, which leaves space for future discoveries. In addition, the literature revealed that many PSs are phytoalexins, thus the selection of the starting material significantly matters in order to find new PSs.

CONCLUSION

Photoactive principles are ubiquitous and can be found in various plant extracts. With the increasing availability of light-irradiation setups for the identification of photoactive natural products, we anticipate the discovery of many new natural PSs in the near future. With the accumulation of chemically diverse PSs, PDT itself might finally reach its clinical breakthrough as a promising alternative treatment against multi-resistant microbes and cancer types.

Photoreactivity of graphene oxide in aqueous system: Reactive oxygen species formation and bisphenol A degradation

The phototransformation and environmental implications of graphene oxide (GO) have been widely studied in order to understand its implications upon release into the environment. However, very little is known about the formation of reactive oxygen species (ROS) by GO under solar irradiation. Currently there are no studies on the mechanism of ROS formation by GO or the amount of ROS catalyzed by the nanomaterials in the environment. In this study, we carefully investigated the different types and formation mechanisms of ROS generated by GO in the presence of simulated solar irradiation. The effect of GO's photoactivity on bisphenol A (BPA), a representative organic co-pollutant, was also studied. The conduction band electron (e_aq^-) of GO led to the formation of different ROS including OH, O₂^-, and ¹O₂. Among the three types of ROS investigated, O₂^- was the most abundant species generated during simulated solar irradiation of GO. BPA was degraded, mainly due to the oxidative potential of the valence band holes produced during solar irradiation of GO. This study advances understanding of the photoactivity of GO and its potential impact on other possible environmental co-pollutants.

Assembly of photoactive orange carotenoid protein from its domains unravels a carotenoid shuttle mechanism

The photoswitchable orange carotenoid protein (OCP) is indispensable for cyanobacterial photoprotection by quenching phycobilisome fluorescence upon photoconversion from the orange OCP^O to the red OCP^R form. Cyanobacterial genomes frequently harbor, besides genes for orange carotenoid proteins (OCPs), several genes encoding homologs of OCP's N- or C-terminal domains (NTD, CTD). Unlike the well-studied NTD homologs, called Red Carotenoid Proteins (RCPs), the role of CTD homologs remains elusive. We show how OCP can be reassembled from its functional domains. Expression of Synechocystis OCP-CTD in carotenoid-producing Escherichia coli yielded violet-colored proteins, which, upon mixing with the RCP-apoprotein, produced an orange-like photoswitchable form that further photoconverted into a species that quenches phycobilisome fluorescence and is spectroscopically indistinguishable from RCP, thus demonstrating a unique carotenoid shuttle mechanism. Spontaneous carotenoid transfer also occurs between canthaxanthin-coordinating OCP-CTD and the OCP apoprotein resulting in formation of photoactive OCP. The OCP-CTD itself is a novel, dimeric carotenoid-binding protein, which can coordinate canthaxanthin and zeaxanthin, effectively quenches singlet oxygen and interacts with the Fluorescence Recovery Protein. These findings assign physiological roles to the multitude of CTD homologs in cyanobacteria and explain the evolutionary process of OCP formation.

Growth of Hydrothermally Derived CdS-Based Nanostructures with Various Crystal Features and Photoactivated Properties

CdS crystallites with rod- and flower-like architectures were synthesized using a facile hydrothermal growth method. The hexagonal crystal structure of CdS dominated the growth mechanisms of the rod- and flower-like crystallites under specific growth conditions, as indicated by structural analyses. The flower-like CdS crystallites had a higher crystal defect density and lower optical band gap value compared with the rod-like CdS crystallites. The substantial differences in microstructures and optical properties between the rod- and flower-like CdS crystallites revealed that the flower-like CdS crystallites exhibited superior photoactivity, and this performance could be further enhanced through appropriate thermal annealing in ambient air. A postannealing procedure conducted in ambient air oxidized the surfaces of the flower-like CdS crystallites and formed a CdO phase. The formation of heterointerfaces between the CdS and CdO phases mainly contributed to the improved photoactivity of the synthesized flower-like CdS crystallites.