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Wu Z, Qiu S, Abbew AW, Chen Z, Liu Y, Zuo J, Ge S. Evaluation of nitrogen source, concentration and feeding mode for co-production of fucoxanthin and fatty acids in Phaeodactylum tricornutum. ALGAL RES 2022. [DOI: 10.1016/j.algal.2022.102655] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
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Abbew AW, Qiu S, Amadu AA, Qasim MZ, Chen Z, Wu Z, Wang L, Ge S. Insights into the multi-targeted effects of free nitrous acid on the microalgae Chlorella sorokiniana in wastewater. BIORESOURCE TECHNOLOGY 2022; 347:126389. [PMID: 34822980 DOI: 10.1016/j.biortech.2021.126389] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 11/15/2021] [Accepted: 11/16/2021] [Indexed: 06/13/2023]
Abstract
Microalgal-bacterial consortium process (MBCP) proposed as an alternative to the activated sludge process contains free nitrous acid (FNA). FNA antimicrobial influences on nitrifiers have been demonstrated. However, its influence on microalgae is largely unknown, limiting the system stability of MBCP. This study revealed the multi-targeted responses of a model wastewater microalgae, Chlorella sorokiniana, to FNA exposure through physiological and transcriptomic analyses. Results showed a concentration-dependent FNA-influence as both microalgal growth and photosynthesis (Fv/Fm, rETR, Y(II), NPQ) inversely correlated with FNA doses. Increased ROS, MDA content (5.0-fold), SOD (2.7-fold), and LDH (12.0-fold) activities in the treatments revealed FNA-induced oxidative pressure. Moreover, RNA-sequencing results revealed significantly downregulated genes related to photosynthesis, respiration, nitrogen metabolism, and tricarboxylic acid cycle. Comparatively, peroxisome, chlorophyll, and carotenoid genes were upregulated. These findings elucidate the inhibitory mechanisms of FNA on microalgae and contribute towards the prospective practical application of the MBCP system for sustainable wastewater treatment.
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Qiu S, Wu Z, Chen Z, Abbew AW, Li J, Ge S. Microalgal Activity and Nutrient Uptake from Wastewater Enhanced by Nanoscale Zerovalent Iron: Performance and Molecular Mechanism. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022; 56:585-594. [PMID: 34933554 DOI: 10.1021/acs.est.1c05503] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Microalgae-based bioremediation presents an alternative to traditional biological wastewater treatment. However, its efficiency is still challenging due to low microalgal activities and growth rate in wastewater. Iron plays an important role in microbial metabolism and is effective to stimulate microbial growth. In this study, a novel approach was proposed to simultaneously promote microalgal activity and nutrient uptake from wastewater using nanoscale zerovalent iron (nZVI), and the underlying molecular mechanism was explored. Compared to the control, 0.05 mg/L of nZVI significantly enhanced biomass production by 113.3% as well as NH4+-N and PO43--P uptake rates by 32.2% and 75.0%, respectively. These observations were attributed to the enhanced metabolic pathways and intracellular regulations. Specifically, nZVI alleviated the cellular oxidative stress via decreased peroxisome biogenesis as indicated by reduced reactive oxygen species, enzymes, and genes involved. nZVI promoted ammonium assimilation, phosphate metabolism, carbon fixation, and energy generation. Moreover, nZVI regulated the biosynthesis and conversions of intracellular biocomposition, leading to increased carotenoid, carbohydrate, and lipid productions and decreased protein and fatty acid yields. The above metabolisms were supported by the regulations of differentially expressed genes involved. This study provided an nZVI-based approach and molecular mechanism for enhancing microalgal activities and nutrient uptake from wastewater.
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Ge S, Wen JH, Kei PL. Cerebral venous thrombosis: a spectrum of imaging findings. Singapore Med J 2021; 62:630-635. [DOI: 10.11622/smedj.2021235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Schnabel M, Pal S, Valderrama B, Cole S, Grivas P, Fernandez E, Diamond E, Master V, Masini C, Eigl B, Petros F, Ge S, Andresen C, Roghmann F, Rodriguez-Vida A, Hoffman-Censits J, Daneshmand S. A randomized, double-blind, placebo-controlled, phase 3 trial of infigratinib as adjuvant therapy in patients with invasive urothelial carcinoma harboring susceptible FGFR3 genetic alterations: PROOF 302. EUR UROL SUPPL 2021. [DOI: 10.1016/s2666-1683(21)03196-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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Ahamad A, Ge S. Lipid droplets are dysregulated in the adult dentate gyrus during seizure. Am J Clin Pathol 2021. [DOI: 10.1093/ajcp/aqab191.187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Introduction/Objective
Dentate gyrus (DG), a neurogenic niche, is a metabolically dense subregion of the hippocampus. Continuous production and integration of new neurons in the existing circuit and harmonious relationship between excitatory and inhibitory neurons accompanied by neuron-glia coupling is essential to maintain hippocampal homeostasis throughout adulthood. Imbalance in the neuronal activity generates seizures and can result in mesial temporal lobe epilepsy (MTLE). MTLE affects 50 million people across the globe and impairs the overall hippocampal network and its associated functions such as memory and cognition. Although altered lipid metabolism has been associated with status epilepticus, the role of lipid droplets (LDs), the minuscule metabolically active organelle known to provide a substrate for cellular energy, has not been explored in DG during seizure. LDs are composed of neutral lipids and surrounded by phospholipid monolayer, which is studded with a structural Perilipin family of proteins 1-5, reported to be involved in lipid metabolism.
Methods/Case Report
To study LDs in the brain, we used a novel approach by injecting Bodipy, a lipid dye in the tail vein of mice, and successfully labeled LDs in the DG. We used the pilocarpine-induced seizure model. After Bodipy injection followed by seizure induction, mice were sacrificed at four time-points 0.5, 1-, 3- and 18 hours.
Results (if a Case Study enter NA)
We found a significant increase in Bodipy signal and Perilipin 4, LDs specific marker expression at four time-points post-seizure than in the control cohort. To elucidate the role of neuron-glia metabolic coupling in DG, we measured LDs in microglia and astrocytes and found a significant increase in LDs in seizure mice than control groups suggesting the role of glia in lipid regulation in DG.
Conclusion
Overall, this novel study will highlight the undiscovered role of LDs in dentate gyrus during seizure and, in the future, can be used as a therapeutic target to alleviate the MTLE phenotype.
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Wang L, Qiu S, Guo J, Ge S. Light Irradiation Enables Rapid Start-Up of Nitritation through Suppressing nxrB Gene Expression and Stimulating Ammonia-Oxidizing Bacteria. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:13297-13305. [PMID: 34529402 DOI: 10.1021/acs.est.1c04174] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Nitritation facilitates the application of anaerobic ammonium oxidation (Anammox)-based processes for cost-efficient nitrogen removal from wastewater. This study proposed light irradiation as a novel strategy to rapidly start up nitritation by stimulating both the activities and growth of ammonia-oxidizing bacteria (AOB) while suppressing that of nitrite-oxidizing bacteria (NOB). Batch assays and kinetic model jointly suggested that AOB activity presented an initial increase followed by a decline while NOB decreased continuously throughout the light energy densities applied. Under optimal light energy densities (0.03-0.08 kJ/mg VSS), the highest nitrite accumulation ratio of 70.0% was achieved in sequencing batch reactors with both mainstream online and sidestream offline light treatments when treating real or synthetic municipal wastewater. Light irradiation induced different responses of AOB and NOB, leading to microbial structure optimization. Specifically, the expression of nxrB was downregulated, while the expression of amoA was upregulated under appropriate light irradiation. Moreover, although Nitrosomonas as typical AOB disappeared, the family Nitrosomonadaceae was doubled with enrichment of Ellin6067 and another four Nitrosomonadaceae genera that were only identified in light-treated reactors, thus ensuring AOB predominance and stable nitritation. These findings offer a new approach to rapidly establishing nitritation using light irradiation in municipal wastewater, especially for nitritation/microalgae system.
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Chen Z, Qiu S, Yu Z, Li M, Ge S. Enhanced Secretions of Algal Cell-Adhesion Molecules and Metal Ion-Binding Exoproteins Promote Self-Flocculation of Chlorella sp. Cultivated in Municipal Wastewater. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:11916-11924. [PMID: 34424674 DOI: 10.1021/acs.est.1c01324] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The mechanism of self-flocculation remains unclear, partially impeding its efficiency enhancement and commercial application of microalgae-based municipal wastewater (MW) bioremediation technology. This study revealed the contributions of exoproteins [PN, proteins in extracellular polymeric substances (EPS)] to the separation of indigenous microalgae from treated MW. Compared to the low light intensity group, the high light intensity (HL) group produced Chlorella sp. with 4.3-fold higher self-flocculation efficiencies (SE). This was attributed to the enriched biological functions and positional rearrangement of increased PN within 2.9-fold higher EPS. Specifically, a total of 75 PN was over-expressed in the HL group among the 129 PN identified through label-free proteomics. The algal cell-adhesion molecules (Algal-CAMs) and metal-ion-binding PN were demonstrated as two dominant contributors promoting cell adhesion and bridging, through function prediction based on the contained domains. The modeled 3D structure showed that Algal-CAMs presented less hydrophilic α-helix abundance and were distributed in the outermost position of the EPS matrix, further facilitating microalgal separation. Moreover, the 10.1% lower hydrophily degree value, negative interfacial free energy (-19.5 mJ/m2), and 6.8-fold lower energy barrier between cells also supported the observed higher SE. This finding is expected to further fill the knowledge gap of the role of PN in microalgal self-flocculation and promote the development of biomass recovery from the microalgae-wastewater system.
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Xu S, Qasim MZ, Zhang T, Wang R, Li C, Ge S. Diversity, abundance and expression of the antibiotic resistance genes in a Chinese landfill: Effect of deposit age. JOURNAL OF HAZARDOUS MATERIALS 2021; 417:126027. [PMID: 33990039 DOI: 10.1016/j.jhazmat.2021.126027] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 04/27/2021] [Accepted: 04/29/2021] [Indexed: 05/23/2023]
Abstract
Landfills are the hotspots for the occurrence of antibiotic resistance genes (ARGs) in the environment. However, limited information is available on the profile of ARGs in response to the varying age of refuse in landfills. In this study, the diversity, abundance and expression of ARGs in a Chinese landfill were assessed by high-throughput quantitative PCR. A total of 154 ARGs were detected and 66% of them were transcriptionally active. The total abundance of ARG transcripts was one magnitude lower than that of ARGs. The ermT-01, tetX, sul2, aadA-02 and aadA2-03 genes were found to be the most abundant ARGs (ARG transcripts) and their sum abundance showed a linear relation with the total abundance of ARGs (ARG transcripts). The total abundance of ARGs (ARG transcripts) in young refuse was significantly higher than that in old refuse (p < 0.01) and the profile of ARGs (ARG transcripts) between the old and young refuse was distinct as revealed by the principal coordinates analysis. The variation partitioning analysis showed heavy metals (mainly Cr and Zn) were the major drivers that affect the profile of ARGs (ARG transcripts). These findings provided new insights into the ARGs in landfills and indicated their potential threats should not be neglected.
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Qi C, Qin Y, Liu D, Gong J, Ge S, Zhang M, Peng Z, Zhou J, Zhang X, Peng X, Wang H, He C, Xiao J, Li Z, Shen L. 1372O CLDN 18.2-targeted CAR-T cell therapy in patients with cancers of the digestive system. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.1481] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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Sun H, Jiang T, Zhang F, Zhang P, Zhang H, Yang H, Lu J, Ge S, Ma B, Ding J, Zhang W. Understanding the effect of free ammonia on microbial nitrification mechanisms in suspended activated sludge bioreactors. ENVIRONMENTAL RESEARCH 2021; 200:111737. [PMID: 34302827 DOI: 10.1016/j.envres.2021.111737] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2021] [Revised: 07/07/2021] [Accepted: 07/18/2021] [Indexed: 06/13/2023]
Abstract
During nitrification, the varieties of microbial structures, metabolic pathways and functional profiles in four parallel laboratory-scale sequencing batch reactors (SBRs) with 0.5, 5, 10 and 15 mg/L of free ammonia (FA) concentrations were analyzed by high-throughput sequencing of the 16S rRNA gene. The SBRs were named S0.5, S5, S10 and S15, respectively. Ammonia removal via the nitrate pathway was achieved in S0.5 and S5 throughout the whole experimental period, while ammonia removal via the nitrite pathway was established in S10 and S15 after 89 and 146 day, respectively. The key finding of this study is that both the microbial diversity and richness were significantly affected (p < 0.05) by the FA concentration at different taxonomic levels. The most dominant taxa of S5, S10 and S15 were same, and mainly included Thauera while S0.5 was mainly composed of Zoogloea. Linear discriminant analysis (LDA) effect size (LEfSe) analysis was used to identify unique biomarkers in SBR activated sludge (AS) sample. The functional genera and enzyme in the four SBRs are similar but different in abundance and they are responsible for the removal of organics and nitrogen. Moreover, metabolic pathways are similar by PICRUSt analysis. The relative proportions of pathway-specific genes involved in some metabolic pathways differed to some extent. The ammonia oxidation rate was positively linked to Nitrosomonas and amo (both Spearman correlation coefficients (ρ) = 0.777) while the nitrite oxidation rate was positively linked to Nitrospira (ρ = 0.777) by co-occurrence network analysis. This work deciphered the response of microbial characteristics to different FA constraints in AS process and could provide helpful information for revealing the biological mechanism of FA inhibition on nitrogen removal.
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Lin S, Ge S, He W, Zeng M. Association of delayed time in the emergency department with the clinical outcomes for critically ill patients. QJM 2021; 114:311-317. [PMID: 32516375 DOI: 10.1093/qjmed/hcaa192] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Revised: 05/06/2020] [Indexed: 11/14/2022] Open
Abstract
BACKGROUND Previous studies have shown the association of waiting time in the emergency department with the prognosis of critically ill patients, but these studies linking the waiting time to clinical outcomes have been inconsistent and limited by small sample size. AIM To determine the relationship between the waiting time in the emergency department and the clinical outcomes for critically ill patients in a large sample population. DESIGN A retrospective cohort study of 13 634 patients. METHODS We used the Medical Information Mart for Intensive Care III database. Multivariable logistic regression was used to determine the independent relationships of the in-hospital mortality rate with the delayed time and different groups. Interaction and stratified analysis were conducted to test whether the effect of delayed time differed across various subgroups. RESULTS After adjustments, the in-hospital mortality in the ≥6 h group increased by 38.1% (OR 1.381, 95% CI 1.221-1.562). Moreover, each delayed hour was associated independently with a 1.0% increase in the risk of in-hospital mortality (OR 1.010, 95% CI 1.008-1.010). In the stratified analysis, intensive care unit (ICU) types, length of hospital stay, length of ICU stay, simplified acute physiology score II and diagnostic category were found to have interactions with ≥6 h group in in-hospital mortality. CONCLUSIONS In this large retrospective cohort study, every delayed hour was associated with an increase in mortality. Furthermore, clinicians should be cautious of patients diagnosed with sepsis, liver/renal/metabolic diseases, internal hemorrhage and cardiovascular disease, and if conditions permit, they should give priority to transferring to the corresponding ICUs.
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Qiu S, Yu Z, Hu Y, Chen Z, Guo J, Xia W, Ge S. An evolved native microalgal consortium-snow system for the bioremediation of biogas and centrate wastewater: Start-up, optimization and stabilization. WATER RESEARCH 2021; 196:117038. [PMID: 33751972 DOI: 10.1016/j.watres.2021.117038] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Revised: 01/24/2021] [Accepted: 02/19/2021] [Indexed: 06/12/2023]
Abstract
It is necessary to develop sustainable technologies for centrate wastewater (CW) and biogas treatment from sludge anaerobic digestion (AD) systems in an environmentally friendly and economical manner. The microalgae-based bioremediation approach presents a competitive alternative due to its capacity for nutrient recovery and carbon sequestration. However, process instabilities and operating challenges limit its development and implementation largely due to the complexities in the CW and biogas. In this study, the evolved native microalgal consortium (ENMC) was firstly developed using the gradual stress increase method to enhance their adaptation in high ammonium condition. The supplementation of local snow (with Ca2+ and Mg2+) and biogas into CW significantly enhanced ENMC growth through batch tests. Subsequently, an integrated ENMC-snow (ENMCS) system was proposed consisting of a hydrolysis-acidification reactor (HAR), biogas upgrade reactor, and photobioreactor (PBR). The ENMCS system was systematically investigated under both batch and semi-continuous operations, by adjusting primary process parameters including the fill ratio, feeding time, hydraulic retention time (HRT), wastewater pretreatment, and PBR type. It was eventually optimized as a 24 h, 70% fermented CW diluted with 30% snow water, semi-continuous feeding system with a fill ratio of 50% and HRT of 6 d in an open-PBR. Long-term operation (310 days) showed superior biomass yield (0.3059 ± 0.0039 g/(L•d)) and nutrient removal efficiencies (95.6 ± 0.13% and 90.8 ± 0.44% for NH4+-N and PO43--P removal). Meanwhile, biogas was upgraded with an 82.2% CO2 reduction. The economic and environmental analysis further demonstrated the ENMCS system as an effective alternative for the bioremediation of AD effluents while simultaneously producing value-added biomass, especially applicable to snowy regions.
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Wen H, Shi W, Ge S, Li J, Zuo L, Liu M. [Value of prediction models for prognosis prediction of colorectal cancer: an analysis based on TCPA database]. NAN FANG YI KE DA XUE XUE BAO = JOURNAL OF SOUTHERN MEDICAL UNIVERSITY 2021; 41:439-446. [PMID: 33849837 DOI: 10.12122/j.issn.1673-4254.2021.03.18] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
OBJECTIVE To assess the value of the combination of multiple proteins in predicting the prognosis of colorectal cancer (CRC) through bioinformatics analysis. OBJECTIVE The protein expression and clinical data were downloaded from TCPA database. Perl and R were used to screen the prognostic-related proteins, and through Cox analysis, the proteins that served as independent prognostic factors of CRC were identified to build the prediction model. Survival analyses were conducted for each of the proteins included in the prediction model and the risk score of the model, and risk curves was drawn for the risk score and the patients' survival status to verify the performance of the model. Independent prognosis analysis and ROC analysis were used to assess the value and advantages of the model in prognosis prediction. The interactions between the proteins included in the model and the differential expressions of the key genes related with the proteins were analyzed. OBJECTIVE Six proteins were screened for model construction. Compared with a single gene, the model showed much greater prognostic value for CRC. Independent prognostic analysis showed that the risk score of the prediction model was significantly related with the prognosis (P < 0.001), and the model could be used as an independent risk factor for prognostic assessment of the patients. ROC analysis showed that the model had good specificity and sensitivity for prognostic prediction (AUC=0.734). Protein interactions showed that BID, SLC1A5 and SRC_pY527 were significantly correlated with other proteins (P < 0.001), and SLC1A5 and SRC_pY527 had the most significant interactions with other proteins (P < 0.001). Except for those of INPP4B, the key genes related with the proteins in the prediction model had significant differential expressions at the mRNA level in CRC (P < 0.05). OBJECTIVE The prediction model constructed based on 6 proteins has good prognostic value for CRC. The proteins SLC1A5 and SRC_pY527 play key roles in the prognosis of CRC, and SRC_pY527 may regulate the occurrence and progression of CRC through the SRC/AKT/MAPK signal axis and thus may serve as a new therapeutic target of CRC.
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Amadu AA, Qiu S, Ge S, Addico GND, Ameka GK, Yu Z, Xia W, Abbew AW, Shao D, Champagne P, Wang S. A review of biopolymer (Poly-β-hydroxybutyrate) synthesis in microbes cultivated on wastewater. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 756:143729. [PMID: 33310224 DOI: 10.1016/j.scitotenv.2020.143729] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Revised: 11/04/2020] [Accepted: 11/05/2020] [Indexed: 06/12/2023]
Abstract
The large quantities of non-degradable single use plastics, production and disposal, in addition to increasing amounts of municipal and industrial wastewaters are among the major global issues known today. Biodegradable plastics from biopolymers such as Poly-β-hydroxybutyrates (PHB) produced by microorganisms are potential substitutes for non-degradable petroleum-based plastics. This paper reviews the current status of wastewater-cultivated microbes utilized in PHB production, including the various types of wastewaters suitable for either pure or mixed culture PHB production. PHB-producing strains that have the potential for commercialization are also highlighted with proposed selection criteria for choosing the appropriate PHB microbe for optimization of processes. The biosynthetic pathways involved in producing microbial PHB are also discussed to highlight the advancements in genetic engineering techniques. Additionally, the paper outlines the factors influencing PHB production while exploring other metabolic pathways and metabolites simultaneously produced along with PHB in a bio-refinery context. Furthermore, the paper explores the effects of extraction methods on PHB yield and quality to ultimately facilitate the commercial production of biodegradable plastics. This review uniquely discusses the developments in research on microbial biopolymers, specifically PHB and also gives an overview of current commercial PHB companies making strides in cutting down plastic pollution and greenhouse gases.
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Qiu S, Wang L, Chen Z, Yang M, Yu Z, Ge S. An integrated mainstream and sidestream strategy for overcoming nitrite oxidizing bacteria adaptation in a continuous plug-flow nutrient removal process. BIORESOURCE TECHNOLOGY 2021; 319:124133. [PMID: 32977093 DOI: 10.1016/j.biortech.2020.124133] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Revised: 09/08/2020] [Accepted: 09/12/2020] [Indexed: 06/11/2023]
Abstract
An integrated mainstream aeration and sidestream sludge treatment was demonstrated to be effective in overcoming the adaptationof nitrite oxidizing bacteria (NOB) in an anoxic/oxic process. Results showed that by employing the alternating free nitrous acid and free ammonia (FNA/FA) sidestream sludge treatment alone, nitritation was established but varied, which was addressed by integrating alternating aeration with step feeding (ALASF) in reactor. Two critical considerations contributed to stable effluent nitrite accumulation (>83.8 %)and nitrogen removal (>83.0 %): 1) aerobic sludge rather than return sludge should be taken for FNA/FA treatment to avoid anoxic starvation which facilitated NOB recovery; 2) ALASF ensured timely denitritation and created constant anoxic disturbance for NOB inhibition. Nitrospira and Nitrobacter after 540-day operation were 0.38 % of seed sludge.A20 % reduction of operating cost was obtained in this nitritation process. This study moved nitritation one step closer to application in continuous plug-flow process from municipal wastewater.
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Yang Z, Li P, Shang Q, Wang Y, He J, Ge S, Jia R, Fan X. CRISPR-mediated BMP9 ablation promotes liver steatosis via the down-regulation of PPARα expression. SCIENCE ADVANCES 2020; 6:6/48/eabc5022. [PMID: 33246954 PMCID: PMC7695473 DOI: 10.1126/sciadv.abc5022] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Accepted: 10/14/2020] [Indexed: 05/09/2023]
Abstract
Obesity drives the development of nonalcoholic fatty liver disease (NAFLD) characterized by hepatic steatosis. Several bone morphogenetic proteins (BMPs) except BMP9 were reported related to metabolic syndrome. This study demonstrates that liver cytokine BMP9 is decreased in the liver and serum of NAFLD model mice and patients. BMP9 knockdown induces lipid accumulation in Hepa 1-6 cells. BMP9-knockout mice exhibit hepatosteatosis due to down-regulated peroxisome proliferator-activated receptor α (PPARα) expression and reduced fatty acid oxidation. In vitro, recombinant BMP9 treatment attenuates triglyceride accumulation by enhancing PPARα promoter activity via the activation of p-smad. PPARα-specific antagonist GW6471 abolishes the effect of BMP9 knockdown. Furthermore, adeno-associated virus-mediated BMP9 overexpression in mouse liver markedly relieves liver steatosis and obesity-related metabolic syndrome. These findings indicate that BMP9 plays a critical role in regulating hepatic lipid metabolism in a PPARα-dependent manner and may provide a previously unknown insight into NAFLD therapeutic approaches.
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Sun H, Shi W, Cai C, Ge S, Ma B, Li X, Ding J. Responses of microbial structures, functions, metabolic pathways and community interactions to different C/N ratios in aerobic nitrification. BIORESOURCE TECHNOLOGY 2020; 311:123422. [PMID: 32413636 DOI: 10.1016/j.biortech.2020.123422] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2020] [Revised: 04/17/2020] [Accepted: 04/19/2020] [Indexed: 06/11/2023]
Abstract
The responses of microbial structures, functional profiles and metabolic pathways during nitrification to four C/N ratios (0, 5, 10 and 15) were investigated in four parallel SBRs denoted as S0, S5, S10, S15. Results indicated that microbial diversities were affected by C/N ratios, while the same dominant taxa were observed, mainly including Proteobacteria, Betaproteobacteria, Rhodocyclales, Rhodocyclaceae, Zoogloea. The unique biomarkers were identified in each sludge sample through LEfSe analysis. Functional genera/enzymes responsible for removing organics and nitrogen coexisted in four SBRs at different abundances, except for that ammonia oxidizing bacteria (AOB) Nitrosomonas (0.33%-0.66%) and ammonia monooxygenase (amo) (9.4 × 10-7-2.8 × 10-6) were only detected in S0. Moreover, PICRUSt analysis indicated similar overall patterns of metabolic pathways in four sludge samples. The network analysis revealed that total nitrogen removal positively correlated with hcp (Spearman's ρ of 0.853), and ammonia oxidizing rate was associated with amo (Spearman's ρ of 0.096).
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Wang KR, Ge S. [Research progress in relationship between tooth loss and Alzheimer's disease]. ZHONGHUA KOU QIANG YI XUE ZA ZHI = ZHONGHUA KOUQIANG YIXUE ZAZHI = CHINESE JOURNAL OF STOMATOLOGY 2020; 55:586-590. [PMID: 32842351 DOI: 10.3760/cma.j.cn112144-20191110-00400] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Tooth loss is a common disease in the elderly, and periodontitis is the main cause of tooth loss. Alzheimer's disease is a primary degenerative brain disease which etiology remains unknown. The patients often demonstrate cognitive impairment with characteristic neuropathological and neurochemical changes. The present article reviewed the relationship and associated mechanisms between tooth loss and Alzheimer's disease.
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Ma B, Xu X, Ge S, Li B, Wei Y, Zhu H, Nan X, Peng Y. Reducing carbon source consumption through a novel denitratation/anammox biofilter to remove nitrate from synthetic secondary effluent. BIORESOURCE TECHNOLOGY 2020; 309:123377. [PMID: 32315917 DOI: 10.1016/j.biortech.2020.123377] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2020] [Revised: 04/11/2020] [Accepted: 04/11/2020] [Indexed: 06/11/2023]
Abstract
This study presents a novel denitratation/anammox biofilter (DABF) for nitrate removal from secondary effluent, where denitratation (NO3-→NO2-) is coupled with anammox (NO2- +NH4+→N2) instead of denitritation (NO2-→N2). Total nitrogen (TN) was removed by 81.90% in this DABF when the average effluent TN concentration was 7.82 mg/L. Meanwhile, organic carbon source consumption and backwash sludge production in the DABF were reduced by 63% and 70%, respectively, compared to conventional denitrifying biofilter (DNBF). Nitrogen banlance analysis indicates that 93% of the nitrogen gas produced in DABF was via anammox. Batch tests confirmed that the DABF biofilm reduced nitrite using ammonium as the electron donor, and accumulated nitrite during denitratation, thus providing nitrite for the anammox bacteria. Moreover, high-throughput sequencing approach also revealed that the anammox bacteria Candidatus Brocadia dominated the community, which could also be responsible for the stable processes in DABF by interacting with the other denitrifying bacteria.
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Qiu S, Shen Y, Zhang L, Ma B, Amadu AA, Ge S. Antioxidant assessment of wastewater-cultivated Chlorella sorokiniana in Drosophila melanogaster. ALGAL RES 2020. [DOI: 10.1016/j.algal.2020.101795] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Chen Z, Qiu S, Amadu AA, Shen Y, Wang L, Wu Z, Ge S. Simultaneous improvements on nutrient and Mg recoveries of microalgal bioremediation for municipal wastewater and nickel laterite ore wastewater. BIORESOURCE TECHNOLOGY 2020; 297:122517. [PMID: 31830719 DOI: 10.1016/j.biortech.2019.122517] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2019] [Revised: 11/27/2019] [Accepted: 11/28/2019] [Indexed: 06/10/2023]
Abstract
Effects of different mixing ratios between synthetic municipal wastewater (MW) and magnesium (Mg2+)-enriched nickel laterite ore wastewater (NLOWW) on growth of Chlorella sorokiniana (C. sorokiniana), photosynthetic activities, cellular biocomposition, nutrient and Mg2+ removal were investigated in photobioreactors. In the culture without NLOWW, wrinkled cells were observed with low biomass production. The culture mixed with 0.13% NLOWW obtained 1.89-fold higher biomass yield, 3.77-fold enhanced photosynthetic activity (Fv/Fm value), and improved nutrient removal (nitrogen by 102.2%, phosphorus by 39.3%). However, excessive Mg2+ at 100% NLOWW produced highest reactive oxygen species suppressing microalgal growth. The Mg2+ removal capacity increased with NLOWW loading. Moreover, microalgal assimilation primarily contributed to nutrient removal while absorption was the dominant Mg2+ removal pathway. Carbohydrate content in biomass increased with Mg2+ loading. Finally, the approach for MW/NLOWW treatment was demonstrated as economically feasible with revenue of $75.6 per kilogram biomass through a comprehensive economic model.
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Ge S, Feng X, Li M, Liu H, Higgins P, Tang Y, Cao Y, Shen J, Jin S. PT04.5: Reduced Postprandial Serum Triglyceride After a Meal Prepared Using Hot Air Frying: A Randomized Crossover Trial. Clin Nutr 2019. [DOI: 10.1016/s0261-5614(19)32563-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Ma JX, Liu YY, Li Q, Ge S, Zhang Z. [Study on the safety and immunogenicity of simultaneous vaccination on both hepatitis E and hepatitis B vaccines]. ZHONGHUA LIU XING BING XUE ZA ZHI = ZHONGHUA LIUXINGBINGXUE ZAZHI 2019; 40:451-456. [PMID: 31006207 DOI: 10.3760/cma.j.issn.0254-6450.2019.04.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: Safety and immunogenicity regarding simultaneous vaccination on both hepatitis E and hepatitis B vaccines were studied. Methods: A total of 600 healthy subjects aged 18-60 were recruited in Chaoyang district of Beijing city, from September 2015 to December 2016. Subjects meeting the inclusion and exclusion criteria were randomly divided into 3 groups: the simultaneous vaccination group of hepatitis E and hepatitis B, the hepatitis B vaccination group and the hepatitis E vaccination group. Members of the 3 groups were all inoculated according to the procedure of '0, 1 and 6 months'. Safety and immunogenicity of the simultaneous vaccination group was compared with the individual vaccination groups. Results: Vaccination groups had 601 subjects, involved with having 150 subjects of hepatitis E vaccination group, 159 subjects of hepatitis B vaccination group, and 292 subjects of simultaneous vaccination of hepatitis E and hepatitis B. Local adverse reactions that mostly common seen, would include pain (25.0%, 73/292), redness (12.7%, 37/292), pruritus (9.2%, 27/292), callus (8.9%, 26/292), swelling (8.2%, 24/292) at the inoculation sites. Systemic adverse reactions would include fever (7.2%, 21/292), headache (5.8%, 17/292), muscle pain (5.5%, 16/292) and fatigue (3.4%, 10/292). No serious adverse reactions associated with vaccination were seen. In addition to the higher incidence of pain at the inoculation sites, rest of the adverse reactions was similar to the simultaneous vaccination group or the individual vaccination groups. One month after the completed immunization process, positive rate and geometric mean concentration(GMC) of the HBsAb were not inferior to that of the hepatitis B vaccine group (94.2% vs. 93.8%, 611.6 WU/ml vs. 745.1 WU/ml). Positive rate and GMC of the HEV IgG were not inferior to that of the hepatitis E vaccinated group (98.8% vs. 100.0%, 11.0 WU/ml vs. 18.0 WU/ml). Conclusions: Simultaneous vaccination strategy on hepatitis E and hepatitis B vaccines showed good safety and immunogenicity. It is recommended that hepatitis E and hepatitis B vaccines should be administered to the susceptible population at the same time, in order to protect the liver functions.
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Chen L, Zhang S, Wu J, Cui J, Zhong L, Zeng L, Ge S. Retraction Note: circRNA_100290 plays a role in oral cancer by functioning as a sponge of the miR-29 family. Oncogene 2019; 38:5750. [PMID: 31197212 PMCID: PMC6755959 DOI: 10.1038/s41388-019-0828-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The Editors and Publisher have agreed to retract the above paper following a request from the authors.
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