Change of dominant phytoplankton groups in the eutrophic coastal sea due to atmospheric deposition

Nutrient stoichiometry and input of trace metals may profoundly affect the growth and community structure of phytoplankton. A bioassay experiment was designed to explore the key components in atmospheric deposition that affect marine phytoplankton growth by adding aerosols and analogues nutrients and Cu to the surface water of the coastal East China Sea (ECS). Our results showed that atmospheric deposition along with the input of phosphate could largely enhance the chlorophyll a (Chl a) concentrations in this eutrophic water. Phosphorus addition lifted the proportions of T. oceanica in Diatoms and B. brevisulcata in Dinoflagellates. T. oceanica replaced S. costatum and became the dominant diatom species after the Chl a peak, probably associated with the N/P ratio approaching to 16. Atmospheric aerosols containing affluent N and little P showed limited promotion to Chl a, and the positive effect was very likely due to the soluble Cu and other trace metals supplied by the aerosol. Moreover, soluble aerosol Cu was found to be conducive to the relative abundance of most dominant class Coscinodiscophyceae, and both soluble aerosol Fe and Cu seemed to be very important for increasing the proportion of S. costatum. Soluble metals could be the key components in aerosols controlling the phytoplankton composition in the eutrophic sea and such impact might exceed affluent P provided by other exogenous sources.

Atmospheric Processing of Iron-Bearing Mineral Dust Aerosol and Its Effect on Growth of a Marine Diatom, Cyclotella meneghiniana

Iron (Fe) is a growth-limiting micronutrient for phytoplankton in major areas of oceans and deposited wind-blown desert dust is a primary Fe source to these regions. Simulated atmospheric processing of four mineral dust proxies and two natural dust samples followed by subsequent growth studies of the marine planktic diatom Cyclotella meneghiniana in artificial sea-water (ASW) demonstrated higher growth response to ilmenite (FeTiO₃) and hematite (α-Fe₂O₃) mixed with TiO₂ than hematite alone. The processed dust treatment enhanced diatom growth owing to dissolved Fe (DFe) content. The fresh dust-treated cultures demonstrated growth enhancements without adding such dissolved Fe. These significant growth enhancements and dissolved Fe measurements indicated that diatoms acquire Fe from solid particles. When diatoms were physically separated from mineral dust particles, the growth responses become smaller. The post-mineralogy analysis of mineral dust proxies added to ASW showed a diatom-induced increased formation of goethite, where the amount of goethite formed correlated with observed enhanced growth. The current work suggests that ocean primary productivity may not only depend on dissolved Fe but also on suspended solid Fe particles and their mineralogy. Further, the diatom C. meneghiniana benefits more from mineral dust particles in direct contact with cells than from physically impeded particles, suggesting the possibility for alternate Fe-acquisition mechanism/s.

Biomimetic and bioinspired silicifications: Recent advances for biomaterial design and applications

The rational design and controllable synthesis of functional silica-based materials have gained increased interest in a variety of biomedical and biotechnological applications due to their unique properties. The current review shows that marine organisms, such as siliceous sponges and diatoms, could be the inspiration for the fabrication of advanced biohybrid materials. Several biomolecules were involved in the molecular mechanism of biosilicification in vivo. Mimicking their behavior, functional silica-based biomaterials have been generated via biomimetic and bioinspired silicification in vitro. Additionally, several advanced technologies were developed for in vitro and in vivo immobilization of biomolecules with potential applications in biocatalysis, biosensors, bioimaging, and immunoassays. A thin silica layer could coat a single living cell or virus as a protective shell offering new opportunities in biotechnology and nanomedicine fields. Promising nanotechnologies have been developed for drug encapsulation and delivery in a targeted and controlled manner, in particular for poorly soluble hydrophobic drugs. Moreover, biomimetic silica, as a morphogenetically active biocompatible material, has been utilized in the field of bone regeneration and in the development of biomedical implantable devices. STATEMENT OF SIGNIFICANCE: In nature, silica-based biomaterials, such as diatom frustules and sponge spicules, with high mechanical and physical properties were created under biocompatible conditions. The fundamental knowledge underlying the molecular mechanisms of biosilica formation could inspire engineers and chemists to design novel hybrid biomaterials using molecular biomimetic strategies. The production of such biohybrid materials brings the biosilicification field closer to practical applications. This review starts with the biosilicification process of sponges and diatoms with recently updated researches. Then, this article covers recent advances in the design of silica-based biomaterials and their potential applications in the fields of biotechnology and nanomedicine, highlighting several promising technologies for encapsulation of functional proteins and living cells, drug delivery and the preparation of scaffolds for bone regeneration.

Assessing mining impacts: The influence of background geochemical conditions on diatom and macroinvertebrate communities in subarctic streams

Mining has changed landscapes locally in northern Fennoscandia and there is an increasing pressure for exploitation of the remaining mineral deposits of the region. Mineral deposits, even if unmined, can strongly influence stream water chemistry, stream biological communities and the ability of organisms to tolerate stressors. Using data sampled from six mining areas with three active (gold and chrome), two closed (gold) and one planned mine (phosphate), we examined how mineral deposits and mining influence water chemistry and diatom and macroinvertebrate communities in subarctic streams in Finnish Lapland. We supplemented the data by additional samples compiled from databases and further assessed how variation in background geological conditions influences bioassessments of the impacts arising from mining. We found that water specific conductivity was elevated in our study streams draining through catchments with a high mineral potential. Mining effects were mainly seen as increased concentration of nitrogen. Influence of mineral deposits was detected in composition of diatom and macroinvertebrate communities, but communities in streams in areas with a high mineral potential were as diverse as those in streams in areas with a low mineral potential. Mining impacts were better detected for diatoms using a reference condition based on sites with a high than low mineral potential, while for macroinvertebrates, the responses were generally less evident, likely because of only minor effects of mining on water chemistry. Community composition and frequencies of occurrence of macroinvertebrate taxa were, however, highly similar between mine-influenced streams and reference streams with a high potential for minerals indicating that the communities are strongly structured by the natural influence of mineral deposits. Incorporating geochemistry into the reference condition would likely improve bioassessments of both taxonomic groups. Replicated monitoring in potentially impacted sites and reference sites would be the most efficient framework for detecting environmental impacts in streams draining through mineral-rich catchments.

Efficiency of benthic diatom-associated bacteria in the removal of benzo(a)pyrene and fluoranthene

We investigated the efficiency of a benthic diatom-associated bacteria in removing benzo(a)pyrene (BaP) and fluoranthene (Flt). The diatom, isolated from a PAH-contaminated sediment of the Bizerte Lagoon (Tunisia), was exposed in axenic and non-axenic cultures to PAHs over 7 days. The diversity of the associated bacteria, both attached (AB) and free-living bacteria (FB), was analyzed by the 16S rRNA amplicon sequencing. The diatom, which maintained continuous growth under PAH treatments, was able to accumulate BaP and Flt, with different efficiencies between axenic and non-axenic cultures. Biodegradation, which constituted the main process for PAH elimination, was enhanced in the presence of bacteria, indicating the co-metabolic synergy of microalgae and associated bacteria in removing BaP and Flt. Diatom and bacteria showed different capacities in the degradation of BaP and Flt. Nitzschia sp. harbored bacterial communities with a distinct composition between attached and free-living bacteria. The AB fraction exhibited higher diversity and abundance relative to FB, while the FB fraction contained genera with the known ability of PAH degradation, such as Marivita, Erythrobacter, and Alcaligenes. Moreover, strains of Staphylococcus and Micrococcus, isolated from the FB community, showed the capacity to grow in the presence of crude oil. These results suggest that a "benthic Nitzschia sp.-associated hydrocarbon-degrading bacteria" consortium can be applied in the bioremediation of PAH-contaminated sites.

Anti-biofouling properties of poly(dimethyl siloxane) with RAFT photopolymerized acrylate/methacrylate surface grafts against model marine organisms

Biofouling of man-made surfaces by marine organisms is a global problem with both financial and environmental consequences. However, the development of non-toxic anti-biofouling coatings is challenged by the diversity of fouling organisms. One possible solution leverages coatings composed of diverse chemical constituents. Reversible addition-fragmentation chain-transfer (RAFT) photopolymerization was used to modify poly(dimethylsiloxane) (PDMSe) surfaces with polymeric grafts composed of three successive combinations of acrylamide, acrylic acid, and hydroxyethyl methacrylate. RAFT limited conflicting variables and allowed for the effect of graft chemistry to be isolated. While all compositions enhanced the anti-biofouling performance compared with the PDMSe control, the ternary, amphiphilic copolymer was the most effective with 98% inhibition of the attachment of zoospores of the green alga Ulva linza, 94% removal of cells of the diatom Navicula incerta, and 62% removal of cells of the bacterium Cellulophaga lytica. However, none of the graft compositions tested were able to mitigate reattachment of adult barnacles, Amphibalanus amphitrite.

Extreme and gradual rainfall effects on winter and summer estuarine phytoplankton communities from Patagonia (Argentina)

Rainfall events bring both, terrigenous materials (including DOM) and nutrients to the aquatic system (e.g., via riverine runoff) having potential effects on the structure and metabolism of the phytoplankton communities. As extreme rainfall events in Patagonia occurred more frequently in the last decade (2010-2019) as compared to the previous ones (1972-2009), we exposed winter and summer phytoplankton communities (using microcosms) to solar radiation, simulating two rainfall conditions - a single extreme vs. intermittent i.e., with gradual inputs, and we assessed their photosynthetic and growth rates responses and taxonomic changes. Rainfall scenarios significantly increased growth of both communities, mainly of small nanoplanktonic species, as compared to the control. Small nanoplanktonic centric diatoms increased and dominated in both rainfall scenarios, as compared to the control, during winter and summer, with significantly smaller cells during summer as compared to winter. Photosynthetic efficiency increased in both rainfall scenarios at the end of the experiment as compared to the control. Overall, the change towards small cells (associated to rainfall events) that can use more effectively solar radiation and nutrients (as compared to large cells) may have a significant impact on the trophic webs of the South West Atlantic Ocean by favoring grazing pressure by microzooplankton, especially during summer.

Cultivation of diatom Pinnularia saprophila for lipid production: A comparison of methods for harvesting the lipid from the cells

The present study underlines the application of centrifugal force and pulse electric field techniques along with its comparison to resonance energy to harvest lipid from a fixed number of Pinnularia saprophila cells. Sulpho phospho vanillin method for lipid, and analysis of cells via microscopy was done. It was found that a centrifugal force of 11110×g for 15 min allowed ~3.39% lipid to ooze out with 2.5% cell destruction. Alternatively, when same numbers of diatom cells were subjected to pulse electric field at 110 kV/27 mA for 10 µs, maximum lipid production of 2.86% with 21.19% cell death was observed. It was perceived that diatom cells in a micro resonating micro fluidic chamber for 20 min harvested 4.4% of lipid with 11.16% of cell death. However, microfluidic device needs to be scaled up using cheaper material instead of silicon wafer, to be an efficient technique to milk lipid from diatoms.

Linking 19th century European settlement to the disruption of a seabird's natural population dynamics

Recent estimates indicate that ∼70% of the world's seabird populations have declined since the 1950s due to human activities. However, for almost all bird populations, there is insufficient long-term monitoring to understand baseline (i.e., preindustrial) conditions, which are required to distinguish natural versus anthropogenically driven changes. Here, we address this lack of long-term monitoring data with multiproxy paleolimnological approaches to examine the long-term population dynamics of a major colony of Leach's Storm-petrel (Hydrobates leucorhous) on Grand Colombier Island in the St. Pierre and Miquelon archipelago-an overseas French territory in the northwest Atlantic Ocean. By reconstructing the last ∼5,800 y of storm-petrel dynamics, we demonstrate that this colony underwent substantial natural fluctuations until the start of the 19th century, when population cycles were disrupted, coinciding with the establishment and expansion of a European settlement. Our paleoenvironmental data, coupled with on-the-ground population surveys, indicate that the current colony is only ∼16% of the potential carrying capacity, reinforcing concerning trends of globally declining seabird populations. As seabirds are sentinel species of marine ecosystem health, such declines provide a call to action for global conservation. In response, we emphasize the need for enlarged protected areas and the rehabilitation of disturbed islands to protect ecologically critical seabird populations. Furthermore, long-term data, such as those provided by paleoecological approaches, are required to better understand shifting baselines in conservation to truly recognize current rates of ecological loss.

Benthic diatom-based indices and isotopic biomonitoring of nitrogen pollution in a warm temperate Austral river system

Rivers are impacted by pollutants from anthropogenic activities such as urbanisation and agricultural practices. Whilst point source pollution has been widely studied and in some cases remediated, non-point pollutant sources remain pervasive, particularly in developing countries that lack economic and human specialist capacity. Monitoring of pollution levels in many regions is additionally challenged by a lack of robust indicators for nitrogen inputs, however, diatom community indices and analysis of variation in microphytobenthos (MBP) stable isotope analysis variations have potential. The present study investigates variations and utilities in benthic diatom indices and MPB δ¹⁵N along different river sections (n = 31) of an austral river between two seasons (wet and dry), testing for relationships with key environmental variables (physical, water and sediment), in the context of N monitoring. One hundred and eighteen diatom taxa belonging to 36 genera were identified, with physical (water flow), water (nitrate, P and total dissolved solids) and sediment (B, Ca, Cr, Na, N, P, SOM, Pb and Zn) variables correlating to one or more of the 12 diatom indices presented. In particular, Biological Diatom Index, Biological Index of Water Quality, Central Economic Community, Index of Artois-Picardie Diatom (IDAP) and Sládeček's Index were strongly explained by sediment variables, whilst Descy's Pollution Index and Schiefele and Schreiner's Index were explained by water and physical variables. Whilst MPB δ¹⁵N were within the "no impact" level in the wet and dry seasons at reference (i.e. unpolluted) sites, all sites located in agricultural or urban areas, and downstream of sewage discharges, had a wider range that encompassed increasing organic impacts ("inorganic impacts" to high "organic impacts"). Temperature and turbidity (negative), as well as dissolved oxygen, waterway width and depth (positive), significantly affected MPB δ¹⁵N, whilst effects of chemistry variables were less apparent. Overall, we found that MPB δ¹⁵N signatures were significantly correlated with Trophic Diatom Index, the Specific Pollution Sensitivity Index and the Artois-Picardie Diatom Index, suggesting the utility of diatoms and MPB δ¹⁵N in assessments of aquatic pollution. In turn, MPB δ¹⁵N values are strong indicators of N pollution across spatial and seasonal gradients. Thus, the results showed the effects of sediment variables on diatoms to be strong, indicating that sediment rather than water characteristics more strongly structure diatom communities. Thus, sediment variables should be sampled when conducting bioassessment studies.

Atlantic walrus signal latitudinal differences in the long-term decline of sea ice-derived carbon to benthic fauna in the Canadian Arctic

Climate change is altering the biogeochemical and physical characteristics of the Arctic marine environment, which impacts sea ice algal and phytoplankton bloom dynamics and the vertical transport of these carbon sources to benthic communities. Little is known about whether the contribution of sea ice-derived carbon to benthic fauna and nitrogen cycling has changed over multiple decades in concert with receding sea ice. We combined compound-specific stable isotope analysis of amino acids with highly branched isoprenoid diatom lipid biomarkers using archived (1982-2016) tissue of benthivorous Atlantic walrus to examine temporal trends of sea ice-derived carbon, nitrogen isotope baseline and trophic position of Atlantic walrus at high- and mid-latitudes in the Canadian Arctic. Associated with an 18% sea ice decline in the mid-Arctic, sea ice-derived carbon contribution to Atlantic walrus decreased by 75% suggesting a strong decoupling of sea ice-benthic habitats. By contrast, a nearly exclusive amount of sea ice-derived carbon was maintained in high-Arctic Atlantic walrus (98% in 1996 and 89% in 2006) despite a similar percentage in sea ice reduction. Nitrogen isotope baseline or the trophic position of Atlantic walrus did not change over time at either location. These findings indicate latitudinal differences in the restructuring of carbon energy sources used by Atlantic walrus and their benthic prey, and in turn a change in Arctic marine ecosystem functioning between sea ice-pelagic-benthic habitats.

Atlantic walrus signal latitudinal differences in the long-term decline of sea ice-derived carbon to benthic fauna in the Canadian Arctic

Climate change is altering the biogeochemical and physical characteristics of the Arctic marine environment, which impacts sea ice algal and phytoplankton bloom dynamics and the vertical transport of these carbon sources to benthic communities. Little is known about whether the contribution of sea ice-derived carbon to benthic fauna and nitrogen cycling has changed over multiple decades in concert with receding sea ice. We combined compound-specific stable isotope analysis of amino acids with highly branched isoprenoid diatom lipid biomarkers using archived (1982-2016) tissue of benthivorous Atlantic walrus to examine temporal trends of sea ice-derived carbon, nitrogen isotope baseline and trophic position of Atlantic walrus at high- and mid-latitudes in the Canadian Arctic. Associated with an 18% sea ice decline in the mid-Arctic, sea ice-derived carbon contribution to Atlantic walrus decreased by 75% suggesting a strong decoupling of sea ice-benthic habitats. By contrast, a nearly exclusive amount of sea ice-derived carbon was maintained in high-Arctic Atlantic walrus (98% in 1996 and 89% in 2006) despite a similar percentage in sea ice reduction. Nitrogen isotope baseline or the trophic position of Atlantic walrus did not change over time at either location. These findings indicate latitudinal differences in the restructuring of carbon energy sources used by Atlantic walrus and their benthic prey, and in turn a change in Arctic marine ecosystem functioning between sea ice-pelagic-benthic habitats.

Assessment of five live-cell characteristics in periphytic diatoms as a measure of copper stress

Metal pollution of fluvial systems remains a major problem and biomonitoring can be a useful tool for assessing the metal contamination. To assess their potential as new bioindicators of copper stress, we treated a field-collected live periphytic diatom community (dominated by Amphora, Navicula, and Nitzschia) with dissolved Cu under optimal growth conditions. We studied the effects of Cu on five live-cell attributes: motility, protoplasmic content, lipid body number and biovolume, and frustule morphology. In all three genera, motility and protoplasmic content decreased, whereas the LB number, biovolume and deformity increased when Cu and exposure time increased. The sensitivity to Cu was highest for % MF, % CPC and % BCLB in Navicula and the LB number and deformity in Nitzschia. Amphora appeared to be more tolerant to Cu in comparison with other genera. The five cell attributes were inter-related. A heatmap showed that a recommended indicator for rapid screening of Cu toxicity was % BCLB for Amphora and % MF for Navicula and Nitzschia. % MF might be the most common representative indicator that can be applied to all three genera to evaluate the lethal effects of Cu stress if only one of the five cell attributes must be selected.

Interactive Effects of CO2 , Temperature, Irradiance, and Nutrient Limitation on the Growth and Physiology of the Marine Diatom Thalassiosira pseudonana (Coscinodiscophyceae)

The marine diatom Thalassiosira pseudonana was grown in continuous culture systems to study the interactive effects of temperature, irradiance, nutrient limitation, and the partial pressure of CO₂ (pCO₂ ) on its growth and physiological characteristics. The cells were able to grow at all combinations of low and high irradiance (50 and 300 μmol photons · m^-2  · s^-1 , respectively, of visible light), low and high pCO₂ (400 and 1,000 μatm, respectively), nutrient limitation (nitrate-limited and nutrient-replete conditions), and temperatures of 10-32°C. Under nutrient-replete conditions, there was no adverse effect of high pCO₂ on growth rates at temperatures of 10-25°C. The response of the cells to high pCO₂ was similar at low and high irradiance. At supraoptimal temperatures of 30°C or higher, high pCO₂ depressed growth rates at both low and high irradiance. Under nitrate-limited conditions, cells were grown at 38 ± 2.4% of their nutrient-saturated rates at the same temperature, irradiance, and pCO₂ . Dark respiration rates consistently removed a higher percentage of production under nitrate-limited versus nutrient-replete conditions. The percentages of production lost to dark respiration were positively correlated with temperature under nitrate-limited conditions, but there was no analogous correlation under nutrient-replete conditions. The results suggest that warmer temperatures and associated more intense thermal stratification of ocean surface waters could lower net photosynthetic rates if the stratification leads to a reduction in the relative growth rates of marine phytoplankton, and at truly supraoptimal temperatures there would likely be a synergistic interaction between the stresses from temperature and high pCO₂ (lower pH).

Seasonal and spatial distributions of morpho-functional phytoplankton groups and the role of environmental factors in a subtropical river-type reservoir

Phytoplankton is capable of responding to aquatic conditions and can therefore be used to monitor freshwater reservoir water quality. Numerous classification techniques, including morpho-functional approaches, have been developed. This study examined changes in phytoplankton assemblages and water quality, which were sampled quarterly from July 2018 to April 2019. The purpose was to contrast the applicability of three classification approaches (functional, morpho-functional and morphological-based functional groupings) for understanding the spatial and seasonal distribution of the biomass variance in phytoplankton functional groups and their driving environmental factors in the ecological zones of the Shanxi Reservoir through multivariate analysis. The results showed that the phytoplankton biomass was highest in the watercourse zone and lowest in the transition zone. Furthermore, the Shanxi Reservoir was characterized by several cyanobacteria (Microcystis spp.) and numerous bacillariophytes (Asterionella sp., Navicula spp. and Aulacoseira granulata). After evaluating the advantages and disadvantages of morpho-functional classifications, we determined that water temperature appeared to be an essential factor, and the morphology-based functional group approach provided the best results for demonstrating phytoplankton succession, despite having lower sensitivity than the others. Nevertheless, these approaches are all appropriate for identifying and monitoring phytoplankton community structure in aquatic systems of reservoirs with complex terrains.

Prolonged high biomass diatom blooms induced formation of hypoxic-anoxic zones in the inner part of Johor Strait

The Johor Strait has experienced rapid development of various human activities and served as the main marine aquaculture area for the two countries that bordered the strait. Several fish kill incidents in 2014 and 2015 have been confirmed, attributed to the algal blooms of ichthyotoxic dinoflagellates; however, the cause of fish kill events after 2016 was not clarified and the causative organisms remained unknown. To clarify the potential cause of fish kills along the Johor Strait, a 1-year field investigation was conducted with monthly sampling between May 2018 and April 2019. Monthly vertical profiles of physical water parameters (temperature, salinity, and dissolved oxygen levels) were measured in situ at different depths (subsurface, 1 m, 5 m, and 8 m) depending on the ambient depth of the water column at the sampling stations. The spatial-temporal variability of macronutrients and chlorophyll a content was analyzed. Our results showed that high chlorophyll a concentration (up to 48.8 μg/L) and high biomass blooms of Skeletonema, Chaetoceros, Rhizosolenia, and Thalassiosira were observed seasonally at the inner part of the strait. A hypoxic to anoxic dead zone, with the dissolved oxygen levels ranging from 0.19 to 1.7 mg/L, was identified in the inner Johor Strait, covering an estimated area of 10.3 km². The occurrence of high biomass diatom blooms and formation of the hypoxic-anoxic zone along the inner part Johor Strait were likely the culprits of some fish kill incidents after 2016.

The Probable Mechanism for Silicon Capture by Diatom Algae: Assimilation of Polycarbonic Acids with Diatoms-Is Endocytosis a Key Stage in Building of Siliceous Frustules?

Many organisms including unicellular (diatoms, radiolaria, and chrysophytes), higher plants (rice and horsetail) and animals (sponges) use silica as a main part of skeletons. The bioavailable form of silicon is silicic acid and the mechanism of silicic acid penetration into living cells is still an enigma. Macropinocytosis was assumed as a key stage of the silicon capture by diatoms but assimilation of monomeric silicic acid by this way requires enormous amounts of water to be passed through the cell. We hypothesized that silicon can be captured by diatoms via endocytosis in the form of partially condensed silicic acid (oligosilicates) whose formation on the diatom surface was supposed. Oligosilicates are negatively charged nanoparticles and similar to coils of poly(acrylic acid) (PAA). We have synthesized fluorescent tagged PAA as well as several neutral and positively charged polymers. Cultivation of the diatom Ulnaria ferefusiformis in the presence of these polymers showed that only PAA is able to penetrate into siliceous frustules. The presence of PAA in the frustules was confirmed with chromatography and PAA causes various aberrations of the valve morphology. Growth of U. ferefusiformis and two other diatoms in the presence of tri- and tetracarbonic fluorescent tagged acids points to the ability of diatoms to recognize substances that bear four acidic groups and to include them into siliceous frustules. Thus, partial condensation of silicic acid is a plausible first stage of silicon assimilation.

Allelopathic inhibitory effect of the macroalga Pyropia haitanensis (Rhodophyta) on harmful bloom-forming Pseudo-nitzschia species

The blooms of harmful microalgae represent a prominent threat to fisheries, public health, and economies throughout the world. Recent studies have shown that certain macroalgae release allelochemicals that can inhibit the growth of bloom-forming microalgae. In this study, we found that the macroalga Pyropia haitanensis significantly inhibited growth of the harmful bloom-forming microalgae Pseudo-nitzschia pungens and Pseudo-nitzschia multiseries. The inhibitory-effect of the live thali of P. haitanensis was highest, followed by that of dry powder, water-soluble extract, and culture medium filtrate. The Pseudo-nitzschia species died 96 h after exposure to 5-10 g fresh-weight L^-1 of P. haitanensis live thalli. Furthermore, an aqueous extract of P. haitanensis suppressed the growth of P. pungens and P. multiseries, thereby indicating that P. haitanensis contains stable allelopathic substances that cause the observed inhibitory-effects. On the basis of these findings, we conclude that the macroalga P. haitanensis would have potential utility in controlling the blooms of Pseudo-nitzschia species.

Gogorevia, a New Monoraphid Diatom Genus for Achnanthes exigua and Allied Taxa (Achnanthidiaceae) Described on the Basis of an Integrated Molecular and Morphological Approach

A new diatom genus, Gogorevia, is described on the basis of an integrated molecular and morphological investigation. Two species are described from Vietnam: the generitype, G. rinatii sp. nov., and G. ovalis sp. nov. These species share many morphological features with Achnanthes exigua and allied taxa that were previously transferred to the genera Achnanthidium or Lemnicola. Our current molecular investigation shows that Gogorevia is distinct and phylogenetically removed from the above-mentioned genera. Morphologically, Gogorevia differs from Achnanthidium and Lemnicola by the shape of the valves, possessing uniseriate striae, raphe morphology, and the presence of an evident sternum. The recently described species Lemnicola uniseriata is transferred to Gogorevia on the basis that it possesses the same morphological features and phylogenetic position as other members of the genus.

Bioprospecting of marine diatoms Thalassiosira, Skeletonema and Chaetoceros for lipids and other value-added products

Diatoms are a major storehouse of valuable fucoxanthin and polyunsaturated fatty acids, with enormous nutraceuticals and biofuel potential. Three marine diatom species isolated from the southern coast of India has been screened and their results show that highest biomass concentration and fucoxanthin yield was obtained in Chaetoceros sp. as 0.217 g L^-1 and 0.403 mg L^-1 respectively. Lipid % as dry cell weight was maximum in Thalassiosira sp. (52%) followed by Skeletonema sp. (44%) and Chaetoceros sp. (22%). However, protein and secondary metabolites content besides the total antioxidant activity was estimated highest in Skeletonema sp. Having strong inhibition zones of 18-20 mm against all the five strains of bacteria also highlights the highest antibacterial prospect in Skeletonema sp. This work manifests the plasticity of diatoms and may provide useful insights for further species-specific selection for large-scale production of eicosapentaenoic acid, docosahexaenoic acid, fucoxanthin and other metabolites with potential health benefits.

Transcriptional Response of Osmolyte Synthetic Pathways and Membrane Transporters in a Euryhaline Diatom During Long-term Acclimation to a Salinity Gradient

How diatoms respond to fluctuations in osmotic pressure is important from both ecological and applied perspectives. It is well known that osmotic stress affects photosynthesis and can result in the accumulation of compounds desirable in pharmaceutical and alternative fuel industries. Gene expression responses to osmotic stress have been studied in short-term trials, but it is unclear whether the same mechanisms are recruited during long-term acclimation. We used RNA-seq to study the genome-wide transcription patterns in the euryhaline diatom, Cyclotella cryptica, following long-term acclimation to salinity that spanned the natural range of fresh to oceanic water. Long-term acclimated C. cryptica exhibited induced synthesis or repressed degradation of the osmolytes glycine betaine, taurine and dimethylsulfoniopropionate (DMSP). Although changes in proline concentration is one of the main responses in short-term osmotic stress, we did not detect a transcriptional change in proline biosynthetic pathways in our long-term experiment. Expression of membrane transporters showed a general tendency for increased import of potassium and export of sodium, consistent with the electrochemical gradients and dependence on co-transported molecules. Our results show substantial between-genotype differences in growth and gene expression reaction norms and suggest that the regulation of proline synthesis important in short-term osmotic stress might not be maintained in long-term acclimation. Further examination using time-course gene expression experiments, metabolomics and genetic validation of gene functions would reinforce patterns inferred from RNA-seq data.

Long-term changes in summer phytoplankton communities and their influencing factors in Daya Bay, China (1991-2017)

Spatial variations in summertime phytoplankton community structure from 1991 to 2017 in Daya Bay, China were investigated in this research. The abundance of total phytoplankton and diatoms significantly increased during the study period in all regions of the bay while an increase in dinoflagellates abundance was only significant in the inner and middle bay areas. Pseudo-nitzschia spp. were overwhelmingly dominant followed by Skeletonema costatum. Ceratium furca was the dominant dinoflagellate. Overall, species diversity and evenness indices showed downward trends during the study period. Moreover, the bloom frequency of Scrippsiella trochoidea (associated with red tides) has increased rapidly since the 2000s in the inner bay. These temporal dynamics are largely explained by enhanced dissolved inorganic nitrogen (DIN) concentrations, which increased by 64.58% during 2005-2017 relative to 1991-2004, induced by human activities, along with temperature reductions and salinity increases resulting from open oceanic seawater intrusion.

Characterization of phytoplankton community in a river ecosystem using pigment composition: a feasibility study

CHEMTAX is a mathematical software for phytoplankton composition evaluation using pigment composition. Although this method has been previously applied in the ocean environment, we firstly utilized the combination of matrix factorization program CHEMTAX and high-performance liquid chromatography (HPLC) to characterize the phytoplankton community from a river system (western part of Weihe River Basin). The obtained results were compared with those from microscopic examination. Based on the comparison, it is suggested that after increasing the ratio of characteristic pigment to chlorophyll a of diatoms and euglena, the diatoms calculated by the CHEMTAX method accounted for 80% of the total biomass, and the results were consistent with microscopic examination, but diatoms obtained from F2, C1 and W5 sample sites were significantly overestimated 33%~60%. The comparison also showed that the model always underestimated cyanobacteria (sample sites F2, C1 were underestimated 25%) and euglena were overestimated (sample sites W3, Q1 were respectively overestimated 33%, 23%), but for chlorophytes, both overestimation and underestimation could occur. When the relevant results from previous applications in the ocean phytoplankton community evaluation were taken into consideration, it can be concluded that CHEMTAX-HPLC method was not accurate enough to characterize the phytoplankton communities in the freshwater (river/lake) ecosystem.

Algae removal performance of UV-radiation-enhanced coagulation for two representative algal species

Algal blooms severely impact the ecological environment and human health, as well as drinking water supplies and treatment systems. This study investigated UV-radiation-enhanced aluminum (Al)-based coagulation for the removal of two representative algal species (Microcystis aeruginosa and Cyclotella sp.) which are responsible for most fresh water algal bloom in different seasons. The results demonstrated that the UV-Al process can enhance algae removal, and simultaneously control algal organic matter (AOM) release. Comparing with Microcystis aeruginosa, Cyclotella sp. was more sensitive to UV irradiation and its activity was severely inhibited by 240 s of UV irradiation; intracellular reactive oxygen species (ROS) increased sharply then decreased rapidly, and SEM images showed cell walls exhibited substantial compression. UV irradiation decreased the zeta potential, which might have contributed to algae removal. Approximately 93.5% of Microcystis aeruginosa cells and 91.4% of Cyclotella sp. cells were removed after 240 s of UV irradiation with 0.4 mmol/L Al. The MCs concentrations after Al coagulation were low (<100 ng/L). The DOC of Microcystis aeruginosa and Cyclotella sp. was also lower (1.2 and 1.6 mg/L, respectively) than the national standard level after UV-Al process. This study highlights the practical application of UV irradiation for enhancing algae removal and simultaneously controlling AOM release in water treatment plants, which is a simple and promising technology. This result also indicates that the water treatment parameters should be adjusted according to the algae species present in different seasons, especially for diatom which needs low UV irradiation and Al dosage.

Short-period hydrological regimes override physico-chemical variables in shaping stream diatom traits, biomass and biofilm community functions

Despite increasing interest in hydrological effects on riverine ecosystems, few studies have documented the impact of hydrology on biofilm community functions, and those existing have typically focused on annual-based hydrological indices. In this study, we conducted monthly samplings during a year in five lowland streams with different flow regimes and investigated the impacts of hydrological conditions and physico-chemical variables on the trait composition of diatoms growing on artificial substrates, biomass (chlorophyll a and ash free dry weight), and biofilm community functions (biochemical processes, i.e., biofilm metabolism and nutrient uptake rates measured in the laboratory). Instead of the commonly used annual-based hydrological indices, we calculated indices for shorter periods (14 and ~28 days) of the hydrological regimes. Results of species-based variation partitioning showed that short-period hydrological indices (10.10 ± 7.18%) contributed more to explain species distribution than physico-chemical variables (5.90 ± 3.83%), indicating the dominant role of hydrology in structuring the diatom community. Specifically, we found different response patterns for different guilds and size classes to the hydrological and physico-chemical variables, and our results demonstrated that species tolerating high disturbance may be more appropriate as indicators of environmental disturbance than low-tolerant species. We also found dominant effects of short-period hydrological events on biomass and biofilm community functions. Despite an overall negative effect of high flow events and flow variations on biomass and biofilm community functions, positive effects on function-biomass ratios were also observed, indicating that the effects of flow regimes on biofilm are complex. In conclusion, our study highlights the importance of including short-period hydrological conditions in studies on environmental factors shaping benthic algae. Based on our results, we recommend use of short-period hydrological conditions when investigating the effects of flow regime on biofilm community composition and functions.