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Lizano P, Kiely C, Mijalkov M, Meda SA, Keedy SK, Hoang D, Zeng V, Lutz O, Pereira JB, Ivleva EI, Volpe G, Xu Y, Lee AM, Rubin LH, Kristian Hill S, Clementz BA, Tamminga CA, Pearlson GD, Sweeney JA, Gershon ES, Keshavan MS, Bishop JR. Peripheral inflammatory subgroup differences in anterior Default Mode network and multiplex functional network topology are associated with cognition in psychosis. Brain Behav Immun 2023; 114:3-15. [PMID: 37506949 PMCID: PMC10592140 DOI: 10.1016/j.bbi.2023.07.014] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 07/17/2023] [Accepted: 07/22/2023] [Indexed: 07/30/2023] Open
Abstract
INTRODUCTION High-inflammation subgroups of patients with psychosis demonstrate cognitive deficits and neuroanatomical alterations. Systemic inflammation assessed using IL-6 and C-reactive protein may alter functional connectivity within and between resting-state networks, but the cognitive and clinical implications of these alterations remain unknown. We aim to determine the relationships of elevated peripheral inflammation subgroups with resting-state functional networks and cognition in psychosis spectrum disorders. METHODS Serum and resting-state fMRI were collected from psychosis probands (schizophrenia, schizoaffective, psychotic bipolar disorder) and healthy controls (HC) from the B-SNIP1 (Chicago site) study who were stratified into inflammatory subgroups based on factor and cluster analyses of 13 cytokines (HC Low n = 32, Proband Low n = 65, Proband High n = 29). Nine resting-state networks derived from independent component analysis were used to assess functional and multilayer connectivity. Inter-network connectivity was measured using Fisher z-transformation of correlation coefficients. Network organization was assessed by investigating networks of positive and negative connections separately, as well as investigating multilayer networks using both positive and negative connections. Cognition was assessed using the Brief Assessment of Cognition in Schizophrenia. Linear regressions, Spearman correlations, permutations tests and multiple comparison corrections were used for analyses in R. RESULTS Anterior default mode network (DMNa) connectivity was significantly reduced in the Proband High compared to Proband Low (Cohen's d = -0.74, p = 0.002) and HC Low (d = -0.85, p = 0.0008) groups. Inter-network connectivity between the DMNa and the right-frontoparietal networks was lower in Proband High compared to Proband Low (d = -0.66, p = 0.004) group. Compared to Proband Low, the Proband High group had lower negative (d = 0.54, p = 0.021) and positive network (d = 0.49, p = 0.042) clustering coefficient, and lower multiplex network participation coefficient (d = -0.57, p = 0.014). Network findings in high inflammation subgroups correlate with worse verbal fluency, verbal memory, symbol coding, and overall cognition. CONCLUSION These results expand on our understanding of the potential effects of peripheral inflammatory signatures and/or subgroups on network dysfunction in psychosis and how they relate to worse cognitive performance. Additionally, the novel multiplex approach taken in this study demonstrated how inflammation may disrupt the brain's ability to maintain healthy co-activation patterns between the resting-state networks while inhibiting certain connections between them.
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Affiliation(s)
- Paulo Lizano
- Department of Psychiatry, Beth Israel Deaconess Medical Center, Boston, MA, USA; Department of Psychiatry, Harvard Medical School, Boston, MA, USA; Division of Translational Neuroscience, Beth Israel Deaconess Medical Center, Boston, MA, USA.
| | - Chelsea Kiely
- Department of Psychiatry, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | - Mite Mijalkov
- Neuro Division, Department of Clinical Neurosciences, Karolinska Institutet, Stockholm, Sweden
| | - Shashwath A Meda
- Department of Psychiatry, Yale University, New Haven, Connecticut, USA
| | - Sarah K Keedy
- Department of Psychiatry and Behavioral Neurosciences, University of Chicago, Chicago, IL, USA
| | - Dung Hoang
- Department of Psychiatry, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | - Victor Zeng
- Department of Psychiatry, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | - Olivia Lutz
- Department of Psychiatry, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | - Joana B Pereira
- Neuro Division, Department of Clinical Neurosciences, Karolinska Institutet, Stockholm, Sweden; Clinical Memory Research Unit, Department of Clinical Sciences, Lund University, Sweden
| | - Elena I Ivleva
- Department of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX
| | - Giovanni Volpe
- Physics Department, University of Gothenburg, Gothenburg, Sweden
| | - Yanxun Xu
- Department of Applied Mathematics and Statistics, Johns Hopkins University, Baltimore, MD, USA
| | - Adam M Lee
- Department of Experimental and Clinical Pharmacology and Psychiatry, University of Minnesota, Minneapolis, MN, USA
| | - Leah H Rubin
- Department of Neurology, Psychiatry and Behavioral Sciences, Molecular and Comparative Pathobiology, and Epidemiology, Johns Hopkins University, Baltimore, MD, USA
| | - S Kristian Hill
- Department of Psychology, Rosalind Franklin University of Medicine and Science, North Chicago, IL, USA
| | - Brett A Clementz
- Department of Psychology, University of Georgia, Athens, Georgia
| | - Carol A Tamminga
- Department of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX
| | | | - John A Sweeney
- Department of Psychiatry, University of Cincinnati Medical Center, Cincinnati, OH, USA
| | - Elliot S Gershon
- Department of Psychiatry and Behavioral Neurosciences, University of Chicago, Chicago, IL, USA
| | - Matcheri S Keshavan
- Department of Psychiatry, Beth Israel Deaconess Medical Center, Boston, MA, USA; Department of Psychiatry, Harvard Medical School, Boston, MA, USA
| | - Jeffrey R Bishop
- Department of Experimental and Clinical Pharmacology and Psychiatry, University of Minnesota, Minneapolis, MN, USA
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Milisav F, Bazinet V, Iturria-Medina Y, Misic B. Resolving inter-regional communication capacity in the human connectome. Netw Neurosci 2023; 7:1051-1079. [PMID: 37781139 PMCID: PMC10473316 DOI: 10.1162/netn_a_00318] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 04/03/2023] [Indexed: 10/03/2023] Open
Abstract
Applications of graph theory to the connectome have inspired several models of how neural signaling unfolds atop its structure. Analytic measures derived from these communication models have mainly been used to extract global characteristics of brain networks, obscuring potentially informative inter-regional relationships. Here we develop a simple standardization method to investigate polysynaptic communication pathways between pairs of cortical regions. This procedure allows us to determine which pairs of nodes are topologically closer and which are further than expected on the basis of their degree. We find that communication pathways delineate canonical functional systems. Relating nodal communication capacity to meta-analytic probabilistic patterns of functional specialization, we also show that areas that are most closely integrated within the network are associated with higher order cognitive functions. We find that these regions' proclivity towards functional integration could naturally arise from the brain's anatomical configuration through evenly distributed connections among multiple specialized communities. Throughout, we consider two increasingly constrained null models to disentangle the effects of the network's topology from those passively endowed by spatial embedding. Altogether, the present findings uncover relationships between polysynaptic communication pathways and the brain's functional organization across multiple topological levels of analysis and demonstrate that network integration facilitates cognitive integration.
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Affiliation(s)
- Filip Milisav
- McConnell Brain Imaging Centre, Montréal Neurological Institute, McGill University, Montréal, Canada
| | - Vincent Bazinet
- McConnell Brain Imaging Centre, Montréal Neurological Institute, McGill University, Montréal, Canada
| | - Yasser Iturria-Medina
- McConnell Brain Imaging Centre, Montréal Neurological Institute, McGill University, Montréal, Canada
| | - Bratislav Misic
- McConnell Brain Imaging Centre, Montréal Neurological Institute, McGill University, Montréal, Canada
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53
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Li X, Salami A, Persson J. Hub architecture of the human structural connectome: Links to aging and processing speed. Neuroimage 2023; 278:120270. [PMID: 37423273 DOI: 10.1016/j.neuroimage.2023.120270] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2023] [Revised: 06/30/2023] [Accepted: 07/06/2023] [Indexed: 07/11/2023] Open
Abstract
The human structural brain network, or connectome, has a rich-club organization with a small number of brain regions showing high network connectivity, called hubs. Hubs are centrally located in the network, energy costly, and critical for human cognition. Aging has been associated with changes in brain structure, function, and cognitive decline, such as processing speed. At a molecular level, the aging process is a progressive accumulation of oxidative damage, which leads to subsequent energy depletion in the neuron and causes cell death. However, it is still unclear how age affects hub connections in the human connectome. The current study aims to address this research gap by constructing structural connectome using fiber bundle capacity (FBC). FBC is derived from Constrained Spherical Deconvolution (CSD) modeling of white-matter fiber bundles, which represents the capacity of a fiber bundle to transfer information. Compared to the raw number of streamlines, FBC is less bias for quantifying connection strength within biological pathways. We found that hubs exhibit longer-distance connections and higher metabolic rates compared to peripheral brain regions, suggesting that hubs are biologically costly. Although the landscape of structural hubs was relatively age-invariant, there were wide-spread age effects on FBC in the connectome. Critically, these age effects were larger in connections within hub compared to peripheral brain connections. These findings were supported by both a cross-sectional sample with wide age-range (N = 137) and a longitudinal sample across 5 years (N = 83). Moreover, our results demonstrated that associations between FBC and processing speed were more concentrated in hub connections than chance level, and FBC in hub connections mediated the age-effects on processing speed. Overall, our findings indicate that structural connections of hubs, which demonstrate greater energy demands, are particular vulnerable to aging. The vulnerability may contribute to age-related impairments in processing speed among older adults.
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Affiliation(s)
- Xin Li
- Aging Research Center, Karolinska Institute and Stockholm University, Stockholm 171 65, Sweden.
| | - Alireza Salami
- Aging Research Center, Karolinska Institute and Stockholm University, Stockholm 171 65, Sweden; Umeå Center for Functional Brain Imaging (UFBI), Umeå University, Umeå 901 87, Sweden; Wallenberg Centre for Molecular Medicine, Umeå University, Umeå 901 87, Sweden; Department of Integrative Medical Biology, Umeå University, Umeå 901 87, Sweden
| | - Jonas Persson
- Aging Research Center, Karolinska Institute and Stockholm University, Stockholm 171 65, Sweden; Center for Lifespan Developmental Research (LEADER), School of Behavioral, Social and Legal Sciences, Örebro University, Örebro 701 82, Sweden
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54
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Pisarchik AN, Andreev AV, Kurkin SA, Stoyanov D, Badarin AA, Paunova R, Hramov AE. Topology switching during window thresholding fMRI-based functional networks of patients with major depressive disorder: Consensus network approach. CHAOS (WOODBURY, N.Y.) 2023; 33:093122. [PMID: 37712918 DOI: 10.1063/5.0166148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Accepted: 08/29/2023] [Indexed: 09/16/2023]
Abstract
We present a novel method for analyzing brain functional networks using functional magnetic resonance imaging data, which involves utilizing consensus networks. In this study, we compare our approach to a standard group-based method for patients diagnosed with major depressive disorder (MDD) and a healthy control group, taking into account different levels of connectivity. Our findings demonstrate that the consensus network approach uncovers distinct characteristics in network measures and degree distributions when considering connection strengths. In the healthy control group, as connection strengths increase, we observe a transition in the network topology from a combination of scale-free and random topologies to a small-world topology. Conversely, the MDD group exhibits uncertainty in weak connections, while strong connections display small-world properties. In contrast, the group-based approach does not exhibit significant differences in behavior between the two groups. However, it does indicate a transition in topology from a scale-free-like structure to a combination of small-world and scale-free topologies. The use of the consensus network approach also holds immense potential for the classification of MDD patients, as it unveils substantial distinctions between the two groups.
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Affiliation(s)
- Alexander N Pisarchik
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo Str., Kaliningrad 236016, Russia
- Center for Biomedical Technology, Universidad Politécnica de Madrid, Campus Montegancedo, Pozuelo de Alarcón 28223, Spain
| | - Andrey V Andreev
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo Str., Kaliningrad 236016, Russia
| | - Semen A Kurkin
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo Str., Kaliningrad 236016, Russia
| | - Drozdstoy Stoyanov
- Department of Psychiatry and Medical Psychology, Research Institute, Medical University Plovdiv, 15A Vassil Aprilov Blvd., Plovdiv 4002, Bulgaria
| | - Artem A Badarin
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo Str., Kaliningrad 236016, Russia
| | - Rossitsa Paunova
- Department of Psychiatry and Medical Psychology, Research Institute, Medical University Plovdiv, 15A Vassil Aprilov Blvd., Plovdiv 4002, Bulgaria
| | - Alexander E Hramov
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo Str., Kaliningrad 236016, Russia
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55
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Li Y, Ma X, Sunderraman R, Ji S, Kundu S. Accounting for temporal variability in functional magnetic resonance imaging improves prediction of intelligence. Hum Brain Mapp 2023; 44:4772-4791. [PMID: 37466292 PMCID: PMC10400788 DOI: 10.1002/hbm.26415] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 06/08/2023] [Accepted: 06/20/2023] [Indexed: 07/20/2023] Open
Abstract
Neuroimaging-based prediction methods for intelligence have seen a rapid development. Among different neuroimaging modalities, prediction using functional connectivity (FC) has shown great promise. Most literature has focused on prediction using static FC, with limited investigations on the merits of such analysis compared to prediction using dynamic FC or region-level functional magnetic resonance imaging (fMRI) times series that encode temporal variability. To account for the temporal dynamics in fMRI, we propose a bi-directional long short-term memory (bi-LSTM) approach that incorporates feature selection mechanism. The proposed pipeline is implemented via an efficient algorithm and applied for predicting intelligence using region-level time series and dynamic FC. We compare the prediction performance using different fMRI features acquired from the Adolescent Brain Cognitive Development (ABCD) study involving nearly 7000 individuals. Our detailed analysis illustrates the consistently inferior performance of static FC compared to region-level time series or dynamic FC for single and combined rest and task fMRI experiments. The joint analysis of task and rest fMRI leads to improved intelligence prediction under all models compared to using fMRI from only one experiment. In addition, the proposed bi-LSTM pipeline based on region-level time series identifies several shared and differential important brain regions across fMRI experiments that drive intelligence prediction. A test-retest analysis of the selected regions shows strong reliability across cross-validation folds. Given the large sample size of ABCD study, our results provide strong evidence that superior prediction of intelligence can be achieved by accounting for temporal variations in fMRI.
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Affiliation(s)
- Yang Li
- Department of Computer ScienceGeorgia State UniversityAtlantaGeorgiaUSA
| | - Xin Ma
- Department of BiostatisticsColumbia UniversityNew YorkNew YorkUSA
| | - Raj Sunderraman
- Department of Computer ScienceGeorgia State UniversityAtlantaGeorgiaUSA
| | - Shihao Ji
- Department of Computer ScienceGeorgia State UniversityAtlantaGeorgiaUSA
| | - Suprateek Kundu
- Department of BiostatisticsThe University of Texas at MD Anderson Cancer CenterHoustonTexasUSA
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56
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Ren X, Libertus ME. Identifying the Neural Bases of Math Competence Based on Structural and Functional Properties of the Human Brain. J Cogn Neurosci 2023; 35:1212-1228. [PMID: 37172121 DOI: 10.1162/jocn_a_02008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Human populations show large individual differences in math performance and math learning abilities. Early math skill acquisition is critical for providing the foundation for higher quantitative skill acquisition and succeeding in modern society. However, the neural bases underlying individual differences in math competence remain unclear. Modern neuroimaging techniques allow us to not only identify distinct local cortical regions but also investigate large-scale neural networks underlying math competence both structurally and functionally. To gain insights into the neural bases of math competence, this review provides an overview of the structural and functional neural markers for math competence in both typical and atypical populations of children and adults. Although including discussion of arithmetic skills in children, this review primarily focuses on the neural markers associated with complex math skills. Basic number comprehension and number comparison skills are outside the scope of this review. By synthesizing current research findings, we conclude that neural markers related to math competence are not confined to one particular region; rather, they are characterized by a distributed and interconnected network of regions across the brain, primarily focused on frontal and parietal cortices. Given that human brain is a complex network organized to minimize the cost of information processing, an efficient brain is capable of integrating information from different regions and coordinating the activity of various brain regions in a manner that maximizes the overall efficiency of the network to achieve the goal. We end by proposing that frontoparietal network efficiency is critical for math competence, which enables the recruitment of task-relevant neural resources and the engagement of distributed neural circuits in a goal-oriented manner. Thus, it will be important for future studies to not only examine brain activation patterns of discrete regions but also examine distributed network patterns across the brain, both structurally and functionally.
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57
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Wang J, Li H, Qu G, Cecil KM, Dillman JR, Parikh NA, He L. Dynamic weighted hypergraph convolutional network for brain functional connectome analysis. Med Image Anal 2023; 87:102828. [PMID: 37130507 PMCID: PMC10247416 DOI: 10.1016/j.media.2023.102828] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 04/14/2023] [Accepted: 04/18/2023] [Indexed: 05/04/2023]
Abstract
The hypergraph structure has been utilized to characterize the brain functional connectome (FC) by capturing the high order relationships among multiple brain regions of interest (ROIs) compared with a simple graph. Accordingly, hypergraph neural network (HGNN) models have emerged and provided efficient tools for hypergraph embedding learning. However, most existing HGNN models can only be applied to pre-constructed hypergraphs with a static structure during model training, which might not be a sufficient representation of the complex brain networks. In this study, we propose a dynamic weighted hypergraph convolutional network (dwHGCN) framework to consider a dynamic hypergraph with learnable hyperedge weights. Specifically, we generate hyperedges based on sparse representation and calculate the hyper similarity as node features. The hypergraph and node features are fed into a neural network model, where the hyperedge weights are updated adaptively during training. The dwHGCN facilitates the learning of brain FC features by assigning larger weights to hyperedges with higher discriminative power. The weighting strategy also improves the interpretability of the model by identifying the highly active interactions among ROIs shared by a common hyperedge. We validate the performance of the proposed model on two classification tasks with three paradigms functional magnetic resonance imaging (fMRI) data from Philadelphia Neurodevelopmental Cohort. Experimental results demonstrate the superiority of our proposed method over existing hypergraph neural networks. We believe our model can be applied to other applications in neuroimaging for its strength in representation learning and interpretation.
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Affiliation(s)
- Junqi Wang
- Imaging Research Center, Department of Radiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA
| | - Hailong Li
- Imaging Research Center, Department of Radiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Neurodevelopmental Disorders Prevention Center, Perinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Artificial Intelligence Imaging Research Center, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Department of Radiology, University of Cincinnati College of Medicine, Cincinnati, OH, USA
| | - Gang Qu
- Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA
| | - Kim M Cecil
- Imaging Research Center, Department of Radiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Department of Radiology, University of Cincinnati College of Medicine, Cincinnati, OH, USA
| | - Jonathan R Dillman
- Imaging Research Center, Department of Radiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Artificial Intelligence Imaging Research Center, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Department of Radiology, University of Cincinnati College of Medicine, Cincinnati, OH, USA
| | - Nehal A Parikh
- Neurodevelopmental Disorders Prevention Center, Perinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA
| | - Lili He
- Imaging Research Center, Department of Radiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Neurodevelopmental Disorders Prevention Center, Perinatal Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Artificial Intelligence Imaging Research Center, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Department of Radiology, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
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58
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Bukhari H, Su C, Dhamala E, Gu Z, Jamison K, Kuceyeski A. Graph-matching distance between individuals' functional connectomes varies with relatedness, age, and cognitive score. Hum Brain Mapp 2023; 44:3541-3554. [PMID: 37042411 PMCID: PMC10203814 DOI: 10.1002/hbm.26296] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 02/10/2023] [Accepted: 03/20/2023] [Indexed: 04/13/2023] Open
Abstract
Functional connectomes (FCs), represented by networks or graphs that summarize coactivation patterns between pairs of brain regions, have been related at a population level to age, sex, cognitive/behavioral scores, life experience, genetics, and disease/disorders. However, quantifying FC differences between individuals also provides a rich source of information with which to map to differences in those individuals' biology, experience, genetics or behavior. In this study, graph matching is used to create a novel inter-individual FC metric, called swap distance, that quantifies the distance between pairs of individuals' partial FCs, with a smaller swap distance indicating the individuals have more similar FC. We apply graph matching to align FCs between individuals from the the Human Connectome ProjectN = 997 and find that swap distance (i) increases with increasing familial distance, (ii) increases with subjects' ages, (iii) is smaller for pairs of females compared to pairs of males, and (iv) is larger for females with lower cognitive scores compared to females with larger cognitive scores. Regions that contributed most to individuals' swap distances were in higher-order networks, that is, default-mode and fronto-parietal, that underlie executive function and memory. These higher-order networks' regions also had swap frequencies that varied monotonically with familial relatedness of the individuals in question. We posit that the proposed graph matching technique provides a novel way to study inter-subject differences in FC and enables quantification of how FC may vary with age, relatedness, sex, and behavior.
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Affiliation(s)
- Hussain Bukhari
- Department of NeuroscienceWeill Cornell MedicineNew YorkNew YorkUSA
| | - Chang Su
- Department of BiostatisticsYale UniversityNew HavenConnecticutUSA
| | - Elvisha Dhamala
- Department of PsychologyYale UniversityNew HavenConnecticutUSA
| | - Zijin Gu
- Department of Electrical and Computer EngineeringCornell UniversityIthacaNew YorkUSA
| | - Keith Jamison
- Department of RadiologyWeill Cornell MedicineNew YorkNew YorkUSA
| | - Amy Kuceyeski
- Department of RadiologyWeill Cornell MedicineNew YorkNew YorkUSA
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59
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Genç E, Metzen D, Fraenz C, Schlüter C, Voelkle MC, Arning L, Streit F, Nguyen HP, Güntürkün O, Ocklenburg S, Kumsta R. Structural architecture and brain network efficiency link polygenic scores to intelligence. Hum Brain Mapp 2023; 44:3359-3376. [PMID: 37013679 PMCID: PMC10171514 DOI: 10.1002/hbm.26286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 02/15/2023] [Accepted: 03/01/2023] [Indexed: 04/05/2023] Open
Abstract
Intelligence is highly heritable. Genome-wide association studies (GWAS) have shown that thousands of alleles contribute to variation in intelligence with small effect sizes. Polygenic scores (PGS), which combine these effects into one genetic summary measure, are increasingly used to investigate polygenic effects in independent samples. Whereas PGS explain a considerable amount of variance in intelligence, it is largely unknown how brain structure and function mediate this relationship. Here, we show that individuals with higher PGS for educational attainment and intelligence had higher scores on cognitive tests, larger surface area, and more efficient fiber connectivity derived by graph theory. Fiber network efficiency as well as the surface of brain areas partly located in parieto-frontal regions were found to mediate the relationship between PGS and cognitive performance. These findings are a crucial step forward in decoding the neurogenetic underpinnings of intelligence, as they identify specific regional networks that link polygenic predisposition to intelligence.
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Affiliation(s)
- Erhan Genç
- Department of Psychology and NeuroscienceLeibniz Research Centre for Working Environment and Human Factors (IfADo)DortmundGermany
| | - Dorothea Metzen
- Biopsychology, Institute for Cognitive Neuroscience, Faculty of PsychologyRuhr University BochumBochumGermany
| | - Christoph Fraenz
- Department of Psychology and NeuroscienceLeibniz Research Centre for Working Environment and Human Factors (IfADo)DortmundGermany
| | - Caroline Schlüter
- Biopsychology, Institute for Cognitive Neuroscience, Faculty of PsychologyRuhr University BochumBochumGermany
| | - Manuel C. Voelkle
- Psychological Research Methods Department of PsychologyHumboldt UniversityBerlinGermany
| | - Larissa Arning
- Department of Human Genetics, Faculty of MedicineRuhr University BochumBochumGermany
| | - Fabian Streit
- Department Genetic Epidemiology in Psychiatry, Central Institute of Mental Health, Medical Faculty MannheimUniversity of HeidelbergMannheimGermany
| | - Huu Phuc Nguyen
- Department of Human Genetics, Faculty of MedicineRuhr University BochumBochumGermany
| | - Onur Güntürkün
- Biopsychology, Institute for Cognitive Neuroscience, Faculty of PsychologyRuhr University BochumBochumGermany
| | - Sebastian Ocklenburg
- Biopsychology, Institute for Cognitive Neuroscience, Faculty of PsychologyRuhr University BochumBochumGermany
- Department of PsychologyMedical School HamburgHamburgGermany
- ICAN Institute for Cognitive and Affective NeuroscienceMedical School HamburgHamburgGermany
| | - Robert Kumsta
- Genetic Psychology, Faculty of PsychologyRuhr University BochumBochumGermany
- Department of Behavioural and Cognitive Sciences, Laboratory for Stress and Gene‐Environment InterplayUniversity of LuxembourgEsch‐sur‐AlzetteLuxembourg
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60
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Sun H, Lin F, Wu X, Zhang T, Li J. Normalized mutual information of fNIRS signals as a measure for accessing typical and atypical brain activity. JOURNAL OF BIOPHOTONICS 2023; 16:e202200369. [PMID: 36808258 DOI: 10.1002/jbio.202200369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Revised: 01/24/2023] [Accepted: 02/10/2023] [Indexed: 06/07/2023]
Abstract
Normalized mutual information (NMI) can be used to detect statistical correlations between time series. We showed possibility of using NMI to quantify synchronicity of information transmission in different brain regions, thus to characterize functional connections, and ultimately analyze differences in physiological states of brain. Resting-state brain signals were recorded from bilateral temporal lobes by functional near-infrared spectroscopy (fNIRS) in 19 young healthy (YH) adults, 25 children with autism spectrum disorder (ASD), and 22 children with typical development (TD). Using NMI of the fNIRS signals, common information volume was assessed for each of three groups. Results showed that mutual information of children with ASD was significantly smaller than that of TD children, while mutual information of YH adults was slightly larger than that of TD children. This study may suggest that NMI could be a measure for assessing brain activity with different development states.
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Affiliation(s)
- Huiwen Sun
- South China Academy of Advanced Optoelectronics, South China Normal University, Guangzhou, China
| | - Fang Lin
- South China Academy of Advanced Optoelectronics, South China Normal University, Guangzhou, China
| | - Xiaoyin Wu
- South China Academy of Advanced Optoelectronics, South China Normal University, Guangzhou, China
| | - Tingzhen Zhang
- South China Academy of Advanced Optoelectronics, South China Normal University, Guangzhou, China
| | - Jun Li
- South China Academy of Advanced Optoelectronics, South China Normal University, Guangzhou, China
- Key Lab for Behavioral Economic Science & Technology, South China Normal University, Guangzhou, China
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61
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Khodaei M, Laurienti PJ, Dagenbach D, Simpson SL. Brain working memory network indices as landmarks of intelligence. NEUROIMAGE. REPORTS 2023; 3:100165. [PMID: 37425210 PMCID: PMC10327823 DOI: 10.1016/j.ynirp.2023.100165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 07/11/2023]
Abstract
Identifying the neural correlates of intelligence has long been a goal in neuroscience. Recently, the field of network neuroscience has attracted researchers' attention as a means for answering this question. In network neuroscience, the brain is considered as an integrated system whose systematic properties provide profound insights into health and behavioral outcomes. However, most network studies of intelligence have used univariate methods to investigate topological network measures, with their focus limited to a few measures. Furthermore, most studies have focused on resting state networks despite the fact that brain activation during working memory tasks has been linked to intelligence. Finally, the literature is still missing an investigation of the association between network assortativity and intelligence. To address these issues, here we employ a recently developed mixed-modeling framework for analyzing multi-task brain networks to elucidate the most critical working memory task network topological properties corresponding to individuals' intelligence differences. We used a data set of 379 subjects (22-35 y/o) from the Human Connectome Project (HCP). Each subject's data included composite intelligence scores, and fMRI during resting state and a 2-back working memory task. Following comprehensive quality control and preprocessing of the minimally preprocessed fMRI data, we extracted a set of the main topological network features, including global efficiency, degree, leverage centrality, modularity, and clustering coefficient. The estimated network features and subject's confounders were then incorporated into the multi-task mixed-modeling framework to investigate how brain network changes between working memory and resting state relate to intelligence score. Our results indicate that the general intelligence score (cognitive composite score) is associated with a change in the relationship between connection strength and multiple network topological properties, including global efficiency, leverage centrality, and degree difference during working memory as it is compared to resting state. More specifically, we observed a higher increase in the positive association between global efficiency and connection strength for the high intelligence group when they switch from resting state to working memory. The strong connections might form superhighways for a more efficient global flow of information through the brain network. Furthermore, we found an increase in the negative association between degree difference and leverage centrality with connection strength during working memory tasks for the high intelligence group. These indicate higher network resilience and assortativity along with higher circuit-specific information flow during working memory for those with a higher intelligence score. Although the exact neurobiological implications of our results are speculative at this point, our results provide evidence for the significant association of intelligence with hallmark properties of brain networks during working memory.
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Affiliation(s)
- Mohammadreza Khodaei
- Virginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest University School of Medicine, Winston-Salem, NC, USA
| | - Paul J. Laurienti
- Virginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest University School of Medicine, Winston-Salem, NC, USA
- Department of Radiology, Wake Forest University School of Medicine, Winston-Salem, NC, USA
| | - Dale Dagenbach
- Department of Psychology, Wake Forest University, Winston-Salem, NC, USA
| | - Sean L. Simpson
- Virginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest University School of Medicine, Winston-Salem, NC, USA
- Department of Biostatistics and Data Science, Wake Forest University School of Medicine, Winston-Salem, NC, USA
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Andreev AV, Kurkin SA, Stoyanov D, Badarin AA, Paunova R, Hramov AE. Toward interpretability of machine learning methods for the classification of patients with major depressive disorder based on functional network measures. CHAOS (WOODBURY, N.Y.) 2023; 33:063140. [PMID: 37318340 DOI: 10.1063/5.0155567] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Accepted: 05/24/2023] [Indexed: 06/16/2023]
Abstract
We address the interpretability of the machine learning algorithm in the context of the relevant problem of discriminating between patients with major depressive disorder (MDD) and healthy controls using functional networks derived from resting-state functional magnetic resonance imaging data. We applied linear discriminant analysis (LDA) to the data from 35 MDD patients and 50 healthy controls to discriminate between the two groups utilizing functional networks' global measures as the features. We proposed the combined approach for feature selection based on statistical methods and the wrapper-type algorithm. This approach revealed that the groups are indistinguishable in the univariate feature space but become distinguishable in a three-dimensional feature space formed by the identified most important features: mean node strength, clustering coefficient, and the number of edges. LDA achieves the highest accuracy when considering the network with all connections or only the strongest ones. Our approach allowed us to analyze the separability of classes in the multidimensional feature space, which is critical for interpreting the results of machine learning models. We demonstrated that the parametric planes of the control and MDD groups rotate in the feature space with increasing the thresholding parameter and that their intersection increases with approaching the threshold of 0.45, for which classification accuracy is minimal. Overall, the combined approach for feature selection provides an effective and interpretable scenario for discriminating between MDD patients and healthy controls using measures of functional connectivity networks. This approach can be applied to other machine learning tasks to achieve high accuracy while ensuring the interpretability of the results.
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Affiliation(s)
- Andrey V Andreev
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo str., Kaliningrad 236016, Russia
| | - Semen A Kurkin
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo str., Kaliningrad 236016, Russia
| | - Drozdstoy Stoyanov
- Department of Psychiatry and Medical Psychology, Research Institute, Medical University Plovdiv, 15A Vassil Aprilov Blvd., Plovdiv 4002, Bulgaria
| | - Artem A Badarin
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo str., Kaliningrad 236016, Russia
| | - Rossitsa Paunova
- Department of Psychiatry and Medical Psychology, Research Institute, Medical University Plovdiv, 15A Vassil Aprilov Blvd., Plovdiv 4002, Bulgaria
| | - Alexander E Hramov
- Baltic Center for Neurotechnology and Artificial Intelligence, Immanuel Kant Baltic Federal University, 14, A. Nevskogo str., Kaliningrad 236016, Russia
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63
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Li Z, Wang Z, Cao D, You R, Hu J. Altered dynamic functional network connectivity states in patients with acute basal ganglia ischemic stroke. Brain Res 2023:148406. [PMID: 37201623 DOI: 10.1016/j.brainres.2023.148406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 05/04/2023] [Accepted: 05/08/2023] [Indexed: 05/20/2023]
Abstract
BACKGROUND Dynamic functional network connectivity (dFNC) patterns are successfully able to capture the time-varying features of intrinsic fluctuations throughout a scan. We explored dFNC alterations across the entire brain in patients with acute ischemic stroke (AIS) of the basal ganglia (BG). METHOD Resting-state functional magnetic resonance imaging data were acquired from 26 patients with first-ever AIS in the BG and 26 healthy controls (HCs). Independent component analysis, the sliding window method, and the K-means clustering method were used to obtain reoccurring dynamic network connectivity patterns. Moreover, temporal features across diverse dFNC states were compared between the two groups, and the local and global efficiencies across states were analyzed to explore the characteristics of the topological networks among states. RESULTS Four dFNC states were characterized for comparison of dynamic brain network connectivity patterns. In contrast to the HC group, the AIS group spent a significantly higher fraction of time in State 1, which is characterized by a relatively weaker brain network connectome. Conversely, compared with HC, patients with AIS showed a lower mean dwell time in State 2, which was characterized by a relatively stronger brain network connectome. Additionally, functional networks exhibited variable efficiency of information transfer across 4 states. CONCLUSIONS AIS not only altered the interaction between the different dynamic networks but also promoted characteristic alterations in the temporal and topological features of large-scale dynamic network connectivity.
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Affiliation(s)
- Zhongming Li
- Department of Imaging, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China.
| | - Zhimin Wang
- Department of Imaging, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China
| | - Dairong Cao
- Department of Imaging, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China
| | - Ruixiong You
- Department of Imaging, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China
| | - Jianping Hu
- Department of Imaging, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China
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64
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Corriveau A, Yoo K, Kwon YH, Chun MM, Rosenberg MD. Functional connectome stability and optimality are markers of cognitive performance. Cereb Cortex 2023; 33:5025-5041. [PMID: 36408606 PMCID: PMC10110430 DOI: 10.1093/cercor/bhac396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Revised: 09/02/2022] [Accepted: 09/03/2022] [Indexed: 11/22/2022] Open
Abstract
Patterns of whole-brain fMRI functional connectivity, or connectomes, are unique to individuals. Previous work has identified subsets of functional connections within these patterns whose strength predicts aspects of attention and cognition. However, overall features of these connectomes, such as how stable they are over time and how similar they are to a group-average (typical) or high-performance (optimal) connectivity pattern, may also reflect cognitive and attentional abilities. Here, we test whether individuals who express more stable, typical, optimal, and distinctive patterns of functional connectivity perform better on cognitive tasks using data from three independent samples. We find that individuals with more stable task-based functional connectivity patterns perform better on attention and working memory tasks, even when controlling for behavioral performance stability. Additionally, we find initial evidence that individuals with more typical and optimal patterns of functional connectivity also perform better on these tasks. These results demonstrate that functional connectome stability within individuals and similarity across individuals predicts individual differences in cognition.
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Affiliation(s)
- Anna Corriveau
- Department of Psychology, The University of Chicago, Chicago, IL 60637, USA
| | - Kwangsun Yoo
- Department of Psychology, Yale University, New Haven, CT 06520, USA
| | - Young Hye Kwon
- Department of Psychology, Yale University, New Haven, CT 06520, USA
| | - Marvin M Chun
- Department of Psychology, Yale University, New Haven, CT 06520, USA
| | - Monica D Rosenberg
- Department of Psychology, The University of Chicago, Chicago, IL 60637, USA
- Neuroscience Institute, The University of Chicago, Chicago, IL 60637, USA
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65
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Kong R, Tan YR, Wulan N, Ooi LQR, Farahibozorg SR, Harrison S, Bijsterbosch JD, Bernhardt BC, Eickhoff S, Yeo BTT. Comparison Between Gradients and Parcellations for Functional Connectivity Prediction of Behavior. Neuroimage 2023; 273:120044. [PMID: 36940760 DOI: 10.1016/j.neuroimage.2023.120044] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 03/15/2023] [Accepted: 03/17/2023] [Indexed: 03/23/2023] Open
Abstract
Resting-state functional connectivity (RSFC) is widely used to predict behavioral measures. To predict behavioral measures, representing RSFC with parcellations and gradients are the two most popular approaches. Here, we compare parcellation and gradient approaches for RSFC-based prediction of a broad range of behavioral measures in the Human Connectome Project (HCP) and Adolescent Brain Cognitive Development (ABCD) datasets. Among the parcellation approaches, we consider group-average "hard" parcellations (Schaefer et al., 2018), individual-specific "hard" parcellations (Kong et al., 2021a), and an individual-specific "soft" parcellation (spatial independent component analysis with dual regression; Beckmann et al., 2009). For gradient approaches, we consider the well-known principal gradients (Margulies et al., 2016) and the local gradient approach that detects local RSFC changes (Laumann et al., 2015). Across two regression algorithms, individual-specific hard-parcellation performs the best in the HCP dataset, while the principal gradients, spatial independent component analysis and group-average "hard" parcellations exhibit similar performance. On the other hand, principal gradients and all parcellation approaches perform similarly in the ABCD dataset. Across both datasets, local gradients perform the worst. Finally, we find that the principal gradient approach requires at least 40 to 60 gradients to perform as well as parcellation approaches. While most principal gradient studies utilize a single gradient, our results suggest that incorporating higher order gradients can provide significant behaviorally relevant information. Future work will consider the inclusion of additional parcellation and gradient approaches for comparison.
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Affiliation(s)
- Ru Kong
- Centre for Sleep and Cognition (CSC) & Centre for Translational Magnetic Resonance Research (TMR), Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health and Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore
| | - Yan Rui Tan
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore
| | - Naren Wulan
- Centre for Sleep and Cognition (CSC) & Centre for Translational Magnetic Resonance Research (TMR), Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health and Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore
| | - Leon Qi Rong Ooi
- Centre for Sleep and Cognition (CSC) & Centre for Translational Magnetic Resonance Research (TMR), Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health and Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore
| | - Seyedeh-Rezvan Farahibozorg
- Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom
| | - Samuel Harrison
- Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom
| | - Janine D Bijsterbosch
- Department of Radiology, Washington University School of Medicine, St Louis, MO, USA
| | - Boris C Bernhardt
- McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, McGill University, Montreal, QC, Canada
| | - Simon Eickhoff
- Institute for Systems Neuroscience, Medical Faculty, Heinrich-Heine University Düsseldorf, Düsseldorf, Germany; Institute of Neuroscience and Medicine, Brain & Behaviour (INM-7), Research Center Jülich, Jülich, Germany
| | - B T Thomas Yeo
- Centre for Sleep and Cognition (CSC) & Centre for Translational Magnetic Resonance Research (TMR), Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health and Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore; Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA.
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66
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Helwegen K, Libedinsky I, van den Heuvel MP. Statistical power in network neuroscience. Trends Cogn Sci 2023; 27:282-301. [PMID: 36725422 DOI: 10.1016/j.tics.2022.12.011] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Revised: 12/14/2022] [Accepted: 12/15/2022] [Indexed: 01/31/2023]
Abstract
Network neuroscience has emerged as a leading method to study brain connectivity. The success of these investigations is dependent not only on approaches to accurately map connectivity but also on the ability to detect real effects in the data - that is, statistical power. We review the state of statistical power in the field and discuss sample size, effect size, measurement error, and network topology as key factors that influence the power of brain connectivity investigations. We use the term 'differential power' to describe how power can vary between nodes, edges, and graph metrics, leaving traces in both positive and negative connectome findings. We conclude with strategies for working with, rather than around, power in connectivity studies.
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Affiliation(s)
- Koen Helwegen
- Department of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Ilan Libedinsky
- Department of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands
| | - Martijn P van den Heuvel
- Department of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands; Department of Child and Adolescent Psychiatry and Psychology, Amsterdam UMC location Vrije Universiteit Amsterdam, Amsterdam, The Netherlands.
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67
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de Souza EA, Silva SA, Vieira BH, Salmon CEG. fMRI functional connectivity is a better predictor of general intelligence than cortical morphometric features and ICA parcellation order affects predictive performance. INTELLIGENCE 2023. [DOI: 10.1016/j.intell.2023.101727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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68
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Anderson ED, Barbey AK. Investigating cognitive neuroscience theories of human intelligence: A connectome-based predictive modeling approach. Hum Brain Mapp 2023; 44:1647-1665. [PMID: 36537816 PMCID: PMC9921238 DOI: 10.1002/hbm.26164] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Revised: 09/18/2022] [Accepted: 11/10/2022] [Indexed: 12/24/2022] Open
Abstract
Central to modern neuroscientific theories of human intelligence is the notion that general intelligence depends on a primary brain region or network, engaging spatially localized (rather than global) neural representations. Recent findings in network neuroscience, however, challenge this assumption, providing evidence that general intelligence may depend on system-wide network mechanisms, suggesting that local representations are necessary but not sufficient to account for the neural architecture of human intelligence. Despite the importance of this key theoretical distinction, prior research has not systematically investigated the role of local versus global neural representations in predicting general intelligence. We conducted a large-scale connectome-based predictive modeling study (N = 297), administering resting-state fMRI and a comprehensive cognitive battery to evaluate the efficacy of modern neuroscientific theories of human intelligence, including spatially localized theories (Lateral Prefrontal Cortex Theory, Parieto-Frontal Integration Theory, and Multiple Demand Theory) and recent global accounts (Process Overlap Theory and Network Neuroscience Theory). The results of our study demonstrate that general intelligence can be predicted by local functional connectivity profiles but is most robustly explained by global profiles of whole-brain connectivity. Our findings further suggest that the improved efficacy of global theories is not reducible to a greater strength or number of connections, but instead results from considering both strong and weak connections that provide the basis for intelligence (as predicted by the Network Neuroscience Theory). Our results highlight the importance of considering local neural representations in the context of a global information-processing architecture, suggesting future directions for theory-driven research on system-wide network mechanisms underlying general intelligence.
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Affiliation(s)
- Evan D. Anderson
- Decision Neuroscience LaboratoryBeckman Institute for Advanced Science and Technology, University of IllinoisUrbanaIllinoisUSA
- Neuroscience ProgramUniversity of IllinoisUrbanaIllinoisUSA
- Ball Aerospace and Technologies CorpBroomfieldColoradoUSA
- Air Force Research LaboratoryWright‐Patterson AFBOhioUSA
| | - Aron K. Barbey
- Decision Neuroscience LaboratoryBeckman Institute for Advanced Science and Technology, University of IllinoisUrbanaIllinoisUSA
- Neuroscience ProgramUniversity of IllinoisUrbanaIllinoisUSA
- Department of PsychologyUniversity of IllinoisUrbanaIllinoisUSA
- Department of BioengineeringUniversity of IllinoisUrbanaIllinoisUSA
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69
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Vértes PE. Computational Models of Typical and Atypical Brain Network Development. Biol Psychiatry 2023; 93:464-470. [PMID: 36593135 DOI: 10.1016/j.biopsych.2022.11.012] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 10/29/2022] [Accepted: 11/16/2022] [Indexed: 11/26/2022]
Abstract
Over the last decade, the organization of brain networks at both micro- and macroscales has become a key focus of neuroscientific inquiry. This has revealed fundamental features of brain network organization-small-worldness, modularity, heavy-tailed degree distributions-and has highlighted how these structural features support brain function. However, the driving forces that shape brain networks over the course of development have begun to be explored only recently. Here, we review recent efforts to gain insights into the mechanisms of brain development through generative modeling of both macroscale human brain networks and microscale cellular connectomes in Caenorhabditis elegans and other organisms. We show how these mathematical models can begin to shed light on the biological processes that drive and constrain the development of brain networks. Finally, we show how generative network models can translate genetic and environmental differences into variability in developmental trajectories, leading to diverse cognitive and mental health outcomes in children and young people.
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Affiliation(s)
- Petra E Vértes
- Department of Psychiatry, University of Cambridge, Cambridge, United Kingdom.
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70
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Gao Z, Xiao Y, Zhu F, Tao B, Yu W, Lui S. The whole-brain connectome landscape in patients with schizophrenia: a systematic review and meta-analysis of graph theoretical characteristics. Neurosci Biobehav Rev 2023; 148:105144. [PMID: 36990373 DOI: 10.1016/j.neubiorev.2023.105144] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 03/14/2023] [Accepted: 03/24/2023] [Indexed: 03/29/2023]
Abstract
The alterations of connectome in schizophrenia have been reported, but the results remain inconsistent. We conducted a systematic review and random-effects meta-analysis on structural or functional connectome MRI studies comparing global graph theoretical characteristics between schizophrenia and healthy controls. Meta-regression and subgroup analyses were performed to examine confounding effects. Based on the included 48 studies, Structural connectome in schizophrenia showed a significant decrease in segregation (lower clustering coefficient and local efficiency, Hedge's g= -0.352 and -0.864, respectively) and integration (higher characteristic path length and lower global efficiency, Hedge's g= 0.532 and -0.577 respectively). The functional connectome showed no difference between groups except γ. Moderator analysis indicated that clinical and methodological factors exerted a potential effect on the graph theoretical characteristics. Our analysis revealed a weaker small-worldization trend in structural connectome of schizophrenia. For the relatively unchanged functional connectome, more homogenous and high-quality studies are warranted to elucidate whether the change was blurred by heterogeneity or the presentation of pathophysiological reconfiguration.
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71
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Invernizzi A, Rechtman E, Oluyemi K, Renzetti S, Curtin P, Colicino E, Ambrosi C, Mascaro L, Patrono A, Corbo D, Cagna G, Gasparotti R, Reichenberg A, Tang CY, Smith DR, Placidi D, Lucchini RG, Wright RO, Horton MK. Topological network properties of resting-state functional connectivity patterns are associated with metal mixture exposure in adolescents. Front Neurosci 2023; 17:1098441. [PMID: 36814793 PMCID: PMC9939635 DOI: 10.3389/fnins.2023.1098441] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 01/17/2023] [Indexed: 02/08/2023] Open
Abstract
Introduction Adolescent exposure to neurotoxic metals adversely impacts cognitive, motor, and behavioral development. Few studies have addressed the underlying brain mechanisms of these metal-associated developmental outcomes. Furthermore, metal exposure occurs as a mixture, yet previous studies most often consider impacts of each metal individually. In this cross-sectional study, we investigated the relationship between exposure to neurotoxic metals and topological brain metrics in adolescents. Methods In 193 participants (53% females, ages: 15-25 years) enrolled in the Public Health Impact of Metals Exposure (PHIME) study, we measured concentrations of four metals (manganese, lead, copper, and chromium) in multiple biological media (blood, urine, hair, and saliva) and acquired resting-state functional magnetic resonance imaging scans. Using graph theory metrics, we computed global and local efficiency (global:GE; local:LE) in 111 brain areas (Harvard Oxford Atlas). We used weighted quantile sum (WQS) regression models to examine association between metal mixtures and each graph metric (GE or LE), adjusted for sex and age. Results We observed significant negative associations between the metal mixture and GE and LE [βGE = -0.076, 95% CI (-0.122, -0.031); βLE= -0.051, 95% CI (-0.095, -0.006)]. Lead and chromium measured in blood contributed most to this association for GE, while chromium measured in hair contributed the most for LE. Discussion Our results suggest that exposure to this metal mixture during adolescence reduces the efficiency of integrating information in brain networks at both local and global levels, informing potential neural mechanisms underlying the developmental toxicity of metals. Results further suggest these associations are due to combined joint effects to different metals, rather than to a single metal.
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Affiliation(s)
- Azzurra Invernizzi
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, United States
| | - Elza Rechtman
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, United States
| | - Kristie Oluyemi
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, United States
- Nash Family Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, NY, United States
- The Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, United States
- Graduate School of Biomedical Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, United States
| | - Stefano Renzetti
- Department of Medical and Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
| | - Paul Curtin
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, United States
| | - Elena Colicino
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, United States
| | | | | | - Alessandra Patrono
- Department of Medical and Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
| | - Daniele Corbo
- Department of Medical and Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
| | - Giuseppa Cagna
- Department of Medical and Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
| | - Roberto Gasparotti
- Department of Medical and Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
| | - Abraham Reichenberg
- Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, United States
| | - Cheuk Y. Tang
- Department of Medical Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
| | - Donald R. Smith
- Department of Microbiology and Environmental Toxicology, University of California, Santa Cruz, Santa Cruz, CA, United States
| | - Donatella Placidi
- Department of Medical and Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
| | - Roberto G. Lucchini
- Department of Medical and Surgical Specialties, Radiological Sciences and Public Health, University of Brescia, Brescia, Italy
- Department of Environmental Health Sciences, Robert Stempel School of Public Health, Florida International University, Miami, FL, United States
| | - Robert O. Wright
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, United States
| | - Megan K. Horton
- Department of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, United States
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72
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Wen X, Yang M, Hsu L, Zhang D. Test-retest reliability of modular-relevant analysis in brain functional network. Front Neurosci 2022; 16:1000863. [PMID: 36570835 PMCID: PMC9770801 DOI: 10.3389/fnins.2022.1000863] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 11/22/2022] [Indexed: 12/13/2022] Open
Abstract
Introduction The human brain could be modeled as a complex network via functional magnetic resonance imaging (fMRI), and the architecture of these brain functional networks can be studied from multiple spatial scales with different graph theory tools. Detecting modules is an important mesoscale network measuring approach that has provided crucial insights for uncovering how brain organizes itself among different functional subsystems. Despite its successful application in a wide range of brain network studies, the lack of comprehensive reliability assessment prevents its potential extension to clinical trials. Methods To fill this gap, this paper, using resting-state test-retest fMRI data, systematically explored the reliabilities of five popular network metrics derived from modular structure. Considering the repeatability of network partition depends heavily on network size and module detection algorithm, we constructed three types of brain functional networks for each subject by using a set of coarse-to-fine brain atlases and adopted four methods for single-subject module detection and twelve methods for group-level module detection. Results The results reported moderate-to-good reliability in modularity, intra- and inter-modular functional connectivities, within-modular degree and participation coefficient at both individual and group levels, indicating modular-relevant network metrics can provide robust evaluation results. Further analysis identified the significant influence of module detection algorithm and node definition approach on reliabilities of network partitions and its derived network analysis results. Discussion This paper provides important guidance for choosing reliable modular-relevant network metrics and analysis strategies in future studies.
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Affiliation(s)
- Xuyun Wen
- College of Computer Science and Technology, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
- MIIT Key Laboratory of Pattern Analysis and Machine Intelligence, Nanjing, Jiangsu, China
| | - Mengting Yang
- College of Computer Science and Technology, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
- MIIT Key Laboratory of Pattern Analysis and Machine Intelligence, Nanjing, Jiangsu, China
| | - Liming Hsu
- Center for Animal MRI, University of North Carolina, Chapel Hill, Chapel Hill, NC, United States
| | - Daoqiang Zhang
- College of Computer Science and Technology, Nanjing University of Aeronautics and Astronautics, Nanjing, Jiangsu, China
- MIIT Key Laboratory of Pattern Analysis and Machine Intelligence, Nanjing, Jiangsu, China
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73
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Haartsen R, Charman T, Pasco G, Johnson MH, Jones EJH. Modulation of EEG theta by naturalistic social content is not altered in infants with family history of autism. Sci Rep 2022; 12:20758. [PMID: 36456597 PMCID: PMC9715667 DOI: 10.1038/s41598-022-24870-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Accepted: 11/22/2022] [Indexed: 12/05/2022] Open
Abstract
Theta oscillations (spectral power and connectivity) are sensitive to the social content of an experience in typically developing infants, providing a possible marker of early social brain development. Autism is a neurodevelopmental condition affecting early social behaviour, but links to underlying social brain function remain unclear. We explored whether modulations of theta spectral power and connectivity by naturalistic social content in infancy are related to family history for autism. Fourteen-month-old infants with (family history; FH; N = 75) and without (no family history; NFH; N = 26) a first-degree relative with autism watched social and non-social videos during EEG recording. We calculated theta (4-5 Hz) spectral power and connectivity modulations (social-non-social) and associated them with outcomes at 36 months. We replicated previous findings of increased theta power and connectivity during social compared to non-social videos. Theta modulations with social content were similar between groups, for both power and connectivity. Together, these findings suggest that neural responses to naturalistic social stimuli may not be strongly altered in 14-month-old infants with family history of autism.
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Affiliation(s)
- Rianne Haartsen
- Centre for Brain and Cognitive Development, Birkbeck College, University of London, London, WC1E 7HX, UK.
- ToddlerLab, Birkbeck, University of London, Malet Street, London, WC1E 7HX, UK.
| | - Tony Charman
- Department of Psychology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, De Crespigny Park, London, SE5 8AF, UK
- South London and Maudsley NHS Foundation Trust, Bethlem Royal Hospital, Monks Orchard Road, Beckenham, Kent, BR3 3BX, UK
| | - Greg Pasco
- Department of Psychology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, De Crespigny Park, London, SE5 8AF, UK
| | - Mark H Johnson
- Centre for Brain and Cognitive Development, Birkbeck College, University of London, London, WC1E 7HX, UK
- Department of Psychology, University of Cambridge, Cambridge, UK
| | - Emily J H Jones
- Centre for Brain and Cognitive Development, Birkbeck College, University of London, London, WC1E 7HX, UK
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74
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Functional connectivity directionality between large-scale resting-state networks across typical and non-typical trajectories in children and adolescence. PLoS One 2022; 17:e0276221. [PMID: 36454744 PMCID: PMC9714732 DOI: 10.1371/journal.pone.0276221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Accepted: 10/04/2022] [Indexed: 12/02/2022] Open
Abstract
Mental disorders often emerge during adolescence and have been associated with age-related differences in connection strengths of brain networks (static functional connectivity), manifesting in non-typical trajectories of brain development. However, little is known about the direction of information flow (directed functional connectivity) in this period of functional brain progression. We employed dynamic graphical models (DGM) to estimate directed functional connectivity from resting state functional magnetic resonance imaging data on 1143 participants, aged 6 to 17 years from the healthy brain network (HBN) sample. We tested for effects of age, sex, cognitive abilities and psychopathology on estimates of direction flow. Across participants, we show a pattern of reciprocal information flow between visual-medial and visual-lateral connections, in line with findings in adults. Investigating directed connectivity patterns between networks, we observed a positive association for age and direction flow from the cerebellar to the auditory network, and for the auditory to the sensorimotor network. Further, higher cognitive abilities were linked to lower information flow from the visual occipital to the default mode network. Additionally, examining the degree networks overall send and receive information to each other, we identified age-related effects implicating the right frontoparietal and sensorimotor network. However, we did not find any associations with psychopathology. Our results suggest that the directed functional connectivity of large-scale resting-state brain networks is sensitive to age and cognition during adolescence, warranting further studies that may explore directed relationships at rest and trajectories in more fine-grained network parcellations and in different populations.
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75
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Leisman G. On the Application of Developmental Cognitive Neuroscience in Educational Environments. Brain Sci 2022; 12:1501. [PMID: 36358427 PMCID: PMC9688360 DOI: 10.3390/brainsci12111501] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 10/25/2022] [Accepted: 11/01/2022] [Indexed: 09/29/2023] Open
Abstract
The paper overviews components of neurologic processing efficiencies to develop innovative methodologies and thinking to school-based applications and changes in educational leadership based on sound findings in the cognitive neurosciences applied to schools and learners. Systems science can allow us to better manage classroom-based learning and instruction on the basis of relatively easily evaluated efficiencies or inefficiencies and optimization instead of simply examining achievement. "Medicalizing" the learning process with concepts such as "learning disability" or employing grading methods such as pass-fail does little to aid in understanding the processes that learners employ to acquire, integrate, remember, and apply information learned. The paper endeavors to overview and provided reference to tools that can be employed that allow a better focus on nervous system-based strategic approaches to classroom learning.
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Affiliation(s)
- Gerry Leisman
- Movement and Cognition Laboratory, Department of Physical Therapy, University of Haifa, Haifa 3498838, Israel; or
- Department of Neurology, Universidad de Ciencias Médicas de la Habana, Havana 11300, Cuba
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76
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Ladwig Z, Seitzman BA, Dworetsky A, Yu Y, Adeyemo B, Smith DM, Petersen SE, Gratton C. BOLD cofluctuation 'events' are predicted from static functional connectivity. Neuroimage 2022; 260:119476. [PMID: 35842100 PMCID: PMC9428936 DOI: 10.1016/j.neuroimage.2022.119476] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 06/09/2022] [Accepted: 07/12/2022] [Indexed: 11/17/2022] Open
Abstract
Recent work identified single time points ("events") of high regional cofluctuation in functional Magnetic Resonance Imaging (fMRI) which contain more large-scale brain network information than other, low cofluctuation time points. This suggested that events might be a discrete, temporally sparse signal which drives functional connectivity (FC) over the timeseries. However, a different, not yet explored possibility is that network information differences between time points are driven by sampling variability on a constant, static, noisy signal. Using a combination of real and simulated data, we examined the relationship between cofluctuation and network structure and asked if this relationship was unique, or if it could arise from sampling variability alone. First, we show that events are not discrete - there is a gradually increasing relationship between network structure and cofluctuation; ∼50% of samples show very strong network structure. Second, using simulations we show that this relationship is predicted from sampling variability on static FC. Finally, we show that randomly selected points can capture network structure about as well as events, largely because of their temporal spacing. Together, these results suggest that, while events exhibit particularly strong representations of static FC, there is little evidence that events are unique timepoints that drive FC structure. Instead, a parsimonious explanation for the data is that events arise from a single static, but noisy, FC structure.
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Affiliation(s)
- Zach Ladwig
- Interdepartmental Neuroscience Program, Northwestern University
| | - Benjamin A Seitzman
- Department of Radiation Oncology, Washington University St. Louis School of Medicine
| | | | - Yuhua Yu
- Department of Psychology, Northwestern University
| | - Babatunde Adeyemo
- Department of Neurology, Washington University St. Louis School of Medicine
| | - Derek M Smith
- Department of Neurology, Division of Cognitive Neurology/Neuropsychology, The Johns Hopkins University School of Medicine
| | - Steven E Petersen
- Department of Radiology, Washington University St. Louis School of Medicine; Department of Neurology, Washington University St. Louis School of Medicine; Department of Psychological and Brain Sciences, Washington University St. Louis School of Medicine; Department of Neuroscience, Washington University St. Louis School of Medicine; Department of Biomedical Engineering, Washington University St. Louis School of Medicine
| | - Caterina Gratton
- Interdepartmental Neuroscience Program, Northwestern University; Department of Psychology, Northwestern University; Department of Neurology, Northwestern University.
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77
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Classification of Contrasting Discrete Emotional States Indicated by EEG Based Graph Theoretical Network Measures. Neuroinformatics 2022; 20:863-877. [PMID: 35286574 DOI: 10.1007/s12021-022-09579-2] [Citation(s) in RCA: 52] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/22/2022] [Indexed: 12/31/2022]
Abstract
The present study shows new findings that reveal the high association between emotional arousal and neuro-functional brain connectivity measures. For this purpose, contrasting discrete emotional states (happiness vs sadness, amusement vs disgust, calmness vs excitement, calmness vs anger, fear vs anger) are classified by using Support Vector Machines (SVMs) driven by Graph Theoretical segregation (clustering coefficients, transitivity, modularity) and integration (global efficiency, local efficiency) measures of the brain network. Emotional EEG data mediated by short duration video film clips is downloaded from publicly available database called DREAMER. Pearson Correlation (PC) and Spearman Correlation have been examined to estimate statistical dependencies between relatively shorter (6 sec) and longer (12 sec) non-overlapped EEG segments across the cortex. Then the corresponding brain connectivity encoded as a graph is transformed into binary numbers with respect to two different thresholds (60%max and mean). Statistical differences between contrasting emotions are obtained by using both one-way Anova tests and step-wise logistic regression modelling in accordance with variables (dependency estimation, segment length, threshold, network measure). Combined integration measures provided the highest classification accuracies (CAs) (75.00% 80.65%) when PC is applied to longer segments in accordance with particular threshold as the mean. The segregation measures also provided useful CAs (74.13% 80.00%), while the combination of both measures did not. The results reveal that discrete emotional states are characterized by balanced network measures even if both segregation and integration measures vary depending on arousal scores of audio-visual stimuli due to neurotransmitter release during video watching.
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78
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Wu X, Lin F, Zhang T, Sun H, Li J. Acquisition time for functional near-infrared spectroscopy resting-state functional connectivity in assessing autism. NEUROPHOTONICS 2022; 9:045007. [PMID: 36466187 PMCID: PMC9709191 DOI: 10.1117/1.nph.9.4.045007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/02/2022] [Accepted: 11/14/2022] [Indexed: 06/17/2023]
Abstract
SIGNIFICANCE Resting state functional connectivity (RSFC) can be used to assess autism spectrum disorder (ASD). Measuring RSFC usually takes 5 to 10 min, during which children with ASD may have difficulty keeping their heads motionless. Therefore, a short acquisition time for RSFC would make clinical implementation more feasible. AIM To find a suitable acquisition time necessary for measuring RSFC with functional near-infrared spectroscopy (fNIRS) for the differentiation between children with ASD and typically developing (TD) children. APPROACH We used fNIRS to record the spontaneous hemodynamic fluctuations from the bilateral temporal lobes of 25 children with ASD and 22 TD children. The recorded signals were truncated into several segments with different time windows, and then the homotopic RSFC was computed for each of these segments and compared between the two groups. RESULTS We observed even in a very short time duration of 0.5 min, the RSFC had already existed a significant difference between the two groups, and 2.0 min might be the minimal time required for measuring RSFC for accurate differentiation between the two groups. CONCLUSIONS The fNIRS-RSFC acquired even in a short time, e.g., 2.0 min, might be a reliable feature for the differentiation between children with ASD and TD children.
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Affiliation(s)
- Xiaoyin Wu
- South China Normal University, South China Academy of Advanced Optoelectronics, Guangzhou, China
| | - Fang Lin
- South China Normal University, South China Academy of Advanced Optoelectronics, Guangzhou, China
| | - Tingzhen Zhang
- South China Normal University, South China Academy of Advanced Optoelectronics, Guangzhou, China
| | - Huiwen Sun
- South China Normal University, South China Academy of Advanced Optoelectronics, Guangzhou, China
| | - Jun Li
- South China Normal University, South China Academy of Advanced Optoelectronics, Guangzhou, China
- South China Normal University, Key Lab for Behavioral Economic Science and Technology, Guangzhou, China
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79
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Parsons N, Ugon J, Morgan K, Shelyag S, Hocking A, Chan SY, Poudel G, Domìnguez D JF, Caeyenberghs K. Structural-Functional Connectivity Bandwidth of the Human Brain. Neuroimage 2022; 263:119659. [PMID: 36191756 DOI: 10.1016/j.neuroimage.2022.119659] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Revised: 09/25/2022] [Accepted: 09/29/2022] [Indexed: 11/26/2022] Open
Abstract
BACKGROUND The human brain is a complex network that seamlessly manifests behaviour and cognition. This network comprises neurons that directly, or indirectly mediate communication between brain regions. Here, we show how multilayer/multiplex network analysis provides a suitable framework to uncover the throughput of structural connectivity (SC) to mediate information transfer-giving rise to functional connectivity (FC). METHOD We implemented a novel method to reconcile SC and FC using diffusion and resting-state functional MRI connectivity data from 484 subjects (272 females, 212 males; age = 29.15 ± 3.47) from the Human Connectome Project. First, we counted the number of direct and indirect structural paths that mediate FC. FC nodes with indirect SC paths were then weighted according to their least restrictive SC path. We refer to this as SC-FC Bandwidth. We then mapped paths with the highest SC-FC Bandwidth across 7 canonical resting-state networks. FINDINGS We found that most pairs of FC nodes were connected by SC paths of length two and three (SC paths of length >5 were virtually non-existent). Direct SC-FC connections accounted for only 10% of all SC-FC connections. The majority of FC nodes without a direct SC path were mediated by a proportion of two (44%) or three SC path lengths (39%). Only a small proportion of FC nodes were mediated by SC path lengths of four (5%). We found high-bandwidth direct SC-FC connections show dense intra- and sparse inter-network connectivity, with a bilateral, anteroposterior distribution. High bandwidth SC-FC triangles have a right superomedial distribution within the somatomotor network. High-bandwidth SC-FC quads have a superoposterior distribution within the default mode network. CONCLUSION Our method allows the measurement of indirect SC-FC using undirected, weighted graphs derived from multimodal MRI data in order to map the location and throughput of SC to mediate FC. An extension of this work may be to explore how SC-FC Bandwidth changes over time, relates to cognition/behavior, and if this measure reflects a marker of neurological injury or psychiatric disorders.
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Affiliation(s)
- Nicholas Parsons
- Cognitive Neuroscience Unit, School of Psychology, Deakin University, Melbourne, VIC, Australia.
| | - Julien Ugon
- School of Information Technology, Faculty of Science Engineering & Built Environment, Deakin University, Melbourne, VIC, Australia
| | - Kerri Morgan
- School of Information Technology, Faculty of Science Engineering & Built Environment, Deakin University, Melbourne, VIC, Australia
| | - Sergiy Shelyag
- School of Information Technology, Faculty of Science Engineering & Built Environment, Deakin University, Melbourne, VIC, Australia
| | - Alex Hocking
- School of Information Technology, Faculty of Science Engineering & Built Environment, Deakin University, Melbourne, VIC, Australia
| | - Su Yuan Chan
- School of Information Technology, Faculty of Science Engineering & Built Environment, Deakin University, Melbourne, VIC, Australia
| | - Govinda Poudel
- School of Information Technology, Faculty of Science Engineering & Built Environment, Deakin University, Melbourne, VIC, Australia
| | - Juan F Domìnguez D
- Cognitive Neuroscience Unit, School of Psychology, Deakin University, Melbourne, VIC, Australia
| | - Karen Caeyenberghs
- Cognitive Neuroscience Unit, School of Psychology, Deakin University, Melbourne, VIC, Australia; Mary MacKillop Institute for Health Research, Australian Catholic University, Melbourne, VIC, Australia
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80
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Terstege DJ, Durante IM, Epp JR. Brain-wide neuronal activation and functional connectivity are modulated by prior exposure to repetitive learning episodes. Front Behav Neurosci 2022; 16:907707. [PMID: 36160680 PMCID: PMC9501867 DOI: 10.3389/fnbeh.2022.907707] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Accepted: 08/23/2022] [Indexed: 11/26/2022] Open
Abstract
Memory storage and retrieval are shaped by past experiences. Prior learning and memory episodes have numerous impacts on brain structure from micro to macroscale. Previous experience with specific forms of learning increases the efficiency of future learning. It is less clear whether such practice effects on one type of memory might also have transferable effects to other forms of memory. Different forms of learning and memory rely on different brain-wide networks but there are many points of overlap in these networks. Enhanced structural or functional connectivity caused by one type of learning may be transferable to another type of learning due to overlap in underlying memory networks. Here, we investigated the impact of prior chronic spatial training on the task-specific functional connectivity related to subsequent contextual fear memory recall in mice. Our results show that mice exposed to prior spatial training exhibited decreased brain-wide activation compared to control mice during the retrieval of a context fear memory. With respect to functional connectivity, we observed changes in several network measures, notably an increase in global efficiency. Interestingly, we also observed an increase in network resilience based on simulated targeted node deletion. Overall, this study suggests that chronic learning has transferable effects on the functional connectivity networks of other types of learning and memory. The generalized enhancements in network efficiency and resilience suggest that learning itself may protect brain networks against deterioration.
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81
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Warm D, Bassetti D, Schroer J, Luhmann HJ, Sinning A. Spontaneous Activity Predicts Survival of Developing Cortical Neurons. Front Cell Dev Biol 2022; 10:937761. [PMID: 36035995 PMCID: PMC9399774 DOI: 10.3389/fcell.2022.937761] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Accepted: 06/20/2022] [Indexed: 11/13/2022] Open
Abstract
Spontaneous activity plays a crucial role in brain development by coordinating the integration of immature neurons into emerging cortical networks. High levels and complex patterns of spontaneous activity are generally associated with low rates of apoptosis in the cortex. However, whether spontaneous activity patterns directly encode for survival of individual cortical neurons during development remains an open question. Here, we longitudinally investigated spontaneous activity and apoptosis in developing cortical cultures, combining extracellular electrophysiology with calcium imaging. These experiments demonstrated that the early occurrence of calcium transients was strongly linked to neuronal survival. Silent neurons exhibited a higher probability of cell death, whereas high frequency spiking and burst behavior were almost exclusively detected in surviving neurons. In local neuronal clusters, activity of neighboring neurons exerted a pro-survival effect, whereas on the functional level, networks with a high modular topology were associated with lower cell death rates. Using machine learning algorithms, cell fate of individual neurons was predictable through the integration of spontaneous activity features. Our results indicate that high frequency spiking activity constrains apoptosis in single neurons through sustained calcium rises and thereby consolidates networks in which a high modular topology is reached during early development.
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82
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DeJong NR, Jansen JFA, van Boxtel MPJ, Schram MT, Stehouwer CDA, Dagnelie PC, van der Kallen CJH, Kroon AA, Wesselius A, Koster A, Backes WH, Köhler S. Cognitive resilience depends on white matter connectivity: The Maastricht Study. Alzheimers Dement 2022; 19:1164-1174. [PMID: 35920350 DOI: 10.1002/alz.12758] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Revised: 05/26/2022] [Accepted: 06/22/2022] [Indexed: 11/06/2022]
Abstract
INTRODUCTION Differences in brain network connectivity may reflect the capability of the neurological substrate to compensate for brain damage and preserve cognitive function (cognitive reserve). We examined the associations between white matter connectivity, brain damage markers, and cognition in a population sample of middle-aged individuals. METHODS A total of 4759 participants from The Maastricht Study (mean age = 59.2, SD = 8.7, 50.2% male) underwent cognitive testing and diffusion magnetic resonance imaging (dMRI), from which brain volume, structural connectivity, and vascular damage were quantified. Multivariable linear regression was used to investigate whether connectivity modified the association between brain damage and cognition, adjusted for demographic and cardiometabolic risk factors. RESULTS More atrophic and vascular brain damage was associated with worse cognition scores. Increasing connectivity moderated the negative association between damage and cognition (χ2 = 8.64, df = 3, p ≤ 0.001); individuals with high damage but strong connectivity showed normal cognition. DISCUSSION Findings support the reserve hypothesis by showing that brain connectivity is associated with cognitive resilience.
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Affiliation(s)
- Nathan R DeJong
- School for Mental Health & Neuroscience, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Psychiatry and Neuropsychology, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Alzheimer Centrum Limburg, Maastricht University Medical Center+, Maastricht, The Netherlands.,Department of Radiology & Nuclear Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands
| | - Jacobus F A Jansen
- School for Mental Health & Neuroscience, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Radiology & Nuclear Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands.,Department of Electrical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - Martin P J van Boxtel
- School for Mental Health & Neuroscience, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Alzheimer Centrum Limburg, Maastricht University Medical Center+, Maastricht, The Netherlands.,Department of Radiology & Nuclear Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands
| | - Miranda T Schram
- School for Mental Health & Neuroscience, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,School for Cardiovascular Diseases (CARIM), Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Internal Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands.,Maastricht Heart & Vascular Center, Maastricht University Medical Center+, Maastricht, The Netherlands
| | - Coen D A Stehouwer
- School for Cardiovascular Diseases (CARIM), Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Internal Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands
| | - Pieter C Dagnelie
- School for Cardiovascular Diseases (CARIM), Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Internal Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands
| | - Carla J H van der Kallen
- School for Cardiovascular Diseases (CARIM), Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Internal Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands
| | - Abraham A Kroon
- School for Cardiovascular Diseases (CARIM), Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Internal Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands
| | - Anke Wesselius
- School of Nutrition and Translational Research in Metabolism (NUTRIM), Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Annemarie Koster
- Faculty of Health, Medicine and Life Sciences, Care and Public Health Research Institute (CAPHRI), Maastricht University, Maastricht, The Netherlands.,Department of Social Medicine, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Walter H Backes
- School for Mental Health & Neuroscience, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Radiology & Nuclear Medicine, Maastricht University Medical Center+, Maastricht, The Netherlands.,Department of Electrical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - Sebastian Köhler
- School for Mental Health & Neuroscience, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Department of Psychiatry and Neuropsychology, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands.,Alzheimer Centrum Limburg, Maastricht University Medical Center+, Maastricht, The Netherlands
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83
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Litwińczuk MC, Trujillo-Barreto N, Muhlert N, Cloutman L, Woollams A. Combination of structural and functional connectivity explains unique variation in specific domains of cognitive function. Neuroimage 2022; 262:119531. [PMID: 35931312 DOI: 10.1016/j.neuroimage.2022.119531] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Revised: 07/20/2022] [Accepted: 08/01/2022] [Indexed: 11/29/2022] Open
Abstract
The relationship between structural and functional brain networks has been characterised as complex: the two networks mirror each other and show mutual influence but they also diverge in their organisation. This work explored whether a combination of structural and functional connectivity can improve the fit of regression models of cognitive performance. Principal Component Analysis (PCA) was first applied to cognitive data from the Human Connectome Project to identify latent cognitive components: Executive Function, Self-regulation, Language, Encoding and Sequence Processing. A Principal Component Regression approach with embedded Step-Wise Regression (SWR-PCR) was then used to fit regression models of each cognitive domain based on structural (SC), functional (FC) or combined structural-functional (CC) connectivity. Executive Function was best explained by the CC model. Self-regulation was equally well explained by SC and FC. Language was equally well explained by CC and FC models. Encoding and Sequence Processing were best explained by SC. Evaluation of out-of-sample models' skill via cross-validation showed that SC, FC and CC produced generalisable models of Language performance. SC models performed most effectively at predicting Language performance in unseen sample. Executive Function was most effectively predicted by SC models, followed only by CC models. Self-regulation was only effectively predicted by CC models and Sequence Processing was only effectively predicted by FC models. The present study demonstrates that integrating structural and functional connectivity can help explaining cognitive performance, but that the added explanatory value (in sample) may be domain-specific and can come at the expense of reduced generalisation performance (out-of-sample).
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Affiliation(s)
| | | | - Nils Muhlert
- Division of Neuroscience and Experimental Psychology, University of Manchester, UK
| | - Lauren Cloutman
- Division of Neuroscience and Experimental Psychology, University of Manchester, UK
| | - Anna Woollams
- Division of Neuroscience and Experimental Psychology, University of Manchester, UK
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84
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Ash H, Chang A, Ortiz RJ, Kulkarni P, Rauch B, Colman R, Ferris CF, Ziegler TE. Structural and functional variations in the prefrontal cortex are associated with learning in pre-adolescent common marmosets (Callithrix jacchus). Behav Brain Res 2022; 430:113920. [PMID: 35595058 PMCID: PMC9362994 DOI: 10.1016/j.bbr.2022.113920] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2021] [Revised: 04/06/2022] [Accepted: 05/04/2022] [Indexed: 12/27/2022]
Abstract
There is substantial evidence linking the prefrontal cortex (PFC) to a variety of cognitive abilities, with adolescence being a critical period in its development. In the current study, we investigated the neural basis of differences in learning in pre-adolescent common marmosets. At 8 months old, marmosets were given anatomical and resting state MRI scans (n = 24). At 9 months old, association learning and inhibitory control was tested using a 'go/no go' visual discrimination (VD) task. Marmosets were grouped into 'learners' (n = 12) and "non-learners" (n = 12), and associations between cognitive performance and sub-regional PFC volumes, as well as PFC connectivity patterns, were investigated. "Learners" had significantly (p < 0.05) larger volumes of areas 11, 25, 47 and 32 than 'non-learners', although 'non-learners' had significantly larger volumes of areas 24a and 8 v than "learners". There was also a significant correlation between average % correct responses to the 'punished' stimulus and volume of area 47. Further, 'non-learners' had significantly greater global PFC connections, as well as significantly greater numbers of connections between the PFC and basal ganglia, cerebellum and hippocampus, compared to 'learners'. These results suggest that larger sub-regions of the orbitofrontal cortex and ventromedial PFC, as well more refined PFC connectivity patterns to other brain regions associated with learning, may be important in successful response inhibition. This study therefore offers new information on the neurodevelopment of individual differences in cognition during pre-adolescence in non-human primates.
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Affiliation(s)
- Hayley Ash
- Wisconsin National Primate Research Center, University of Wisconsin, Madison, WI, USA.
| | - Arnold Chang
- Center for Translational NeuroImaging, Northeastern University, Boston, MA, USA
| | - Richard J Ortiz
- Center for Translational NeuroImaging, Northeastern University, Boston, MA, USA; Department of Chemistry and Biochemistry, New Mexico State University, Las Cruces, NM, USA
| | - Praveen Kulkarni
- Center for Translational NeuroImaging, Northeastern University, Boston, MA, USA
| | - Beth Rauch
- Department of Medical Physics, University of Wisconsin, Madison, WI, USA
| | - Ricki Colman
- Wisconsin National Primate Research Center, University of Wisconsin, Madison, WI, USA; Department of Cell and Regenerative Biology, University of Wisconsin, Madison, WI, USA
| | - Craig F Ferris
- Center for Translational NeuroImaging, Northeastern University, Boston, MA, USA
| | - Toni E Ziegler
- Wisconsin National Primate Research Center, University of Wisconsin, Madison, WI, USA
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Archery under the (electroencephalography-)hood: Theta-lateralization as a marker for motor learning. Neuroscience 2022; 499:23-39. [PMID: 35870564 DOI: 10.1016/j.neuroscience.2022.07.019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Revised: 07/14/2022] [Accepted: 07/15/2022] [Indexed: 11/22/2022]
Abstract
An intrinsic characteristic of the motor system is the preference of one side of the body. Lateralization is found in motor behavior and in the structural and functional correlates of cortical motor networks. While genetic factors have been elucidated as mechanisms leading to such asymmetries, findings in motor learning and experience from clinical experience demonstrate considerable additional plasticity during the lifespan. If and how functional lateralization develops in short timeframes during training of motor skills involving both sides of the body is still largely unclear. In the present exploratory study, we investigate lateralization of theta-, alpha- and beta-band oscillations during training of an ecologically valid skill - archery. We relate lateralization shift to performance improvement and elucidate the underlying cortical areas. To this end, healthy participants without any previous experience in archery underwent intensive training with 100 shots on each of three days. 64-channel electroencephalography was recorded simultaneously during the individual shots. We found that a central-parietal theta lateralization shift to the left immediately before the shot was associated with performance improvement. Lateralization of alpha or beta did not yield a significant association. Importantly, areas of maximum activation were not identical with areas showing the strongest associations with performance improvement. These data suggest that learning a complex bimanual motor skill is associated with a shift of theta-band oscillations to the left in central-parietal areas. The relationship with performance improvement may reflect increased cortical efficiency of task-relevant processing.
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86
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Xin X, Duan F, Kranz GS, Shu D, Fan R, Gao Y, Yan Z, Chang J. Functional network characteristics based on EEG of patients in acute ischemic stroke: A pilot study. NeuroRehabilitation 2022; 51:455-465. [PMID: 35848041 DOI: 10.3233/nre-220107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
BACKGROUND Ischemic stroke is a common type of stroke associated with reorganization of functional network of the brain. OBJECTIVE This pilot study aimed to investigate the characteristics of functional brain networks based on EEG in patients with acute ischemic stroke. METHODS Seven patients with ischemic stroke within 72 hours of onset and seven healthy controls were enrolled in the study. Dynamic EEG monitoring and clinical information were repeatedly collected within 72 hours (T1), on the 5th day (T2), and on the 7th day (T3) of stroke onset. A directed transfer function was employed to construct functional brain connection patterns. Graph theoretical analysis was performed to evaluate the characteristics of functional brain networks. RESULTS First, we found that the brain networks of ischemic stroke patients were quite different from the healthy controls. The clustering coefficient (0.001 < Threshold < 0.2) in Delta, Theta, and Alpha bands for the patients were significantly lower (P < 0.01) and the shortest path length in all bands (0.001 < Threshold < 0.2) for the patients were significantly longer (P < 0.01). Moreover, the peaks of the shortest path length for the patients seemed to be higher in all bands with larger thresholds. Secondly, the brain networks for the patients showed a characterized time-variation pattern. The clustering coefficient (0.001 < Threshold < 0.2) of T1 was higher than that of T2 in alpha band (P < 0.01). The shortest path length (0.001 < Threshold < 0.2) of T3 was shorter than that of T2 (P < 0.01) in all bands, and the peak of T3 was numerically higher than that of T2 in all bands with narrower thresholds. CONCLUSION Functional brain networks in patients with acute ischemic stroke showed impaired global functional integration and decreased efficiency of information transmission compared with healthy subjects. The shortening of the shortest path length during the recovery indicates neural plasticity and reorganization.
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Affiliation(s)
- Xiyan Xin
- TCM Department, Peking University Third Hospital, Beijing, China
| | - Fang Duan
- Department of Information Science& Engineering, Huaqiao University, Xiamen, China
| | - Georg S Kranz
- Department of Rehabilitation Sciences, The Hong Kong Polytechnic University, Hong Kong, China.,Department of Psychiatry and Psychotherapy, Medical University of Vienna, Vienna, Austria.,TheState Key Laboratory of Brain and Cognitive Sciences, The Universityof Hong Kong, Hong Kong, China
| | - Dong Shu
- Department of Information Science& Engineering, Huaqiao University, Xiamen, China
| | - Ruiwen Fan
- TCM Department, Peking University Third Hospital, Beijing, China
| | - Ying Gao
- Department of Neurology, Dongzhimen Hospital, Beijing University of ChineseMedicine, Beijing, China
| | - Zheng Yan
- Department of Information Science& Engineering, Huaqiao University, Xiamen, China
| | - Jingling Chang
- Department of Neurology, Dongzhimen Hospital, Beijing University of ChineseMedicine, Beijing, China
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87
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Lee DA, Lee J, Lee HJ, Park KM. Alterations of limbic structure volumes and limbic covariance network in patients with cluster headache. J Clin Neurosci 2022; 103:72-77. [PMID: 35843183 DOI: 10.1016/j.jocn.2022.07.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 06/27/2022] [Accepted: 07/09/2022] [Indexed: 10/17/2022]
Abstract
The aim of this study was to compare the limbic structures and covariance network in patients with cluster headache to those of healthy controls. We enrolled 23 patients with newly diagnosed cluster headache and 31 healthy controls. They underwent three-dimensional T1-weighted imaging utilizing a 3.0 Tesla MRI scanner. Volumetric analysis of the subcortical limbic structures, including the hippocampus, amygdala, thalamus, mammillary body, hypothalamus, basal forebrain, septal nuclei, fornix, and nucleus accumbens, was performed. We examined the limbic covariance network using a graph theory. The volumes of the limbic structures between patients with cluster headache and healthy controls were significantly different. The volume of the left hippocampus in patients with cluster headache was significantly lower than that in healthy controls (0.256 vs 0.291 %, p = 0.002). Patients with cluster headache showed significant alterations of the limbic covariance network. The average strength, global efficiency, local efficiency, mean clustering coefficient, and transitivity were lower (5.238 vs 10.322, p = 0.030; 0.355 vs 0.608, p = 0.020; 0.547 vs 1.553, p = 0.020; 0.424 vs 0.895, p = 0.016; respectively), whereas the characteristic path length was higher (3.314 vs 1.752, p = 0.040) in patients with cluster headache than in healthy controls. We detected alterations of limbic structure volumes in patients with cluster headache compared to healthy controls, especially in the hippocampus. We also found significant alterations in the limbic covariance network in patients with cluster headache who showed decreased segregation and integration. These abnormalities could be related to the pathophysiology of cluster headache.
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Affiliation(s)
- Dong Ah Lee
- Department of Neurology, Haeundae Paik Hospital, Inje University College of Medicine, Busan, Republic of Korea
| | - Joonwon Lee
- Department of Neurology, Haeundae Paik Hospital, Inje University College of Medicine, Busan, Republic of Korea
| | - Ho-Joon Lee
- Department of Radiology, Haeundae Paik Hospital, Inje University College of Medicine, Busan, Republic of Korea
| | - Kang Min Park
- Department of Neurology, Haeundae Paik Hospital, Inje University College of Medicine, Busan, Republic of Korea.
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Zhu J, Qiu A. Interindividual variability in functional connectivity discovers differential development of cognition and transdiagnostic dimensions of psychopathology in youth. Neuroimage 2022; 260:119482. [PMID: 35842101 DOI: 10.1016/j.neuroimage.2022.119482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Revised: 06/30/2022] [Accepted: 07/12/2022] [Indexed: 11/25/2022] Open
Abstract
Cognitive and psychological development during adolescence is different from one another, which is rooted in individual differences in maturational changes in the adolescent brain. This study employed multi-modal MRI data and characterized interindividual variability in functional connectivity (IVFC) and its associations with cognition and psychopathology using the Philadelphia Neurodevelopmental Cohort (PNC) of 755 youth. We employed resting state functional MRI (rs-fMRI) and diffusion weighted images (DWIs) to estimate brain structural and functional networks. We computed the IVFC of individuals and examined its relation with structural and functional organizations. We further employed sparse partial least squares (sparse-PLS) and meta-analysis to examine the developmental associations of the IVFC with cognition and transdiagnostic dimensions of psychopathology in early, middle, and late adolescence. Our results revealed that the IVFC spatial topography reflects the brain functional integration and structure-function decoupling. Age effects on the IVFC of association networks were mediated by the FC among the triple networks, including frontoparietal, salience, and default mode networks (DMN), while those of primary and cerebellar networks were mediated by the cerebello-cortical FC. The IVFC of the triple and cerebellar networks explained the variance of executive functions and externalizing behaviors in early adolescence and then the variance of emotion and internalizing and psychosis in middle and late adolescence. We further evaluated this finding via meta-analysis on task-based studies on cognition and psychopathology. These findings implicate the emerging importance of the IVFC of the triple and cerebellar networks in cognitive, emotional, and psychopathological development during adolescence.
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Affiliation(s)
- Jingwen Zhu
- Department of Biomedical Engineering, National University of Singapore, 4 Engineering Drive 3, Block E4 #04-08, 117583, Singapore
| | - Anqi Qiu
- Department of Biomedical Engineering, National University of Singapore, 4 Engineering Drive 3, Block E4 #04-08, 117583, Singapore; NUS (Suzhou) Research Institute, National University of Singapore, China; The N.1 Institute for Health, National University of Singapore, Singapore; Institute of Data Science, National University of Singapore, Singapore; Department of Biomedical Engineering, The Johns Hopkins University, United States.
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89
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Frischkorn GT, Hilger K, Kretzschmar A, Schubert AL. Intelligenzdiagnostik der Zukunft. PSYCHOLOGISCHE RUNDSCHAU 2022. [DOI: 10.1026/0033-3042/a000598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Zusammenfassung. Die menschliche Intelligenz ist eines der am besten erforschten und validierten Konstrukte innerhalb der Psychologie. Dennoch wird die Validität von Intelligenztests im gruppen- und insbesondere kulturvergleichenden Kontext regelmäßig und berechtigterweise kritisch hinterfragt. Obwohl verschiedene Alternativen und Weiterentwicklungen der Intelligenzdiagnostik vorgeschlagen wurden (z. B. kulturfaire Tests), sind fundamentale Probleme in der vergleichenden Intelligenzdiagnostik noch immer ungelöst und die Validitäten entsprechender Verfahren unklar. In dem vorliegenden Positionspapier wird diese Thematik aus der Perspektive der Kognitionspsychologie und der kognitiven Neurowissenschaften beleuchtet und eine prozessorientierte und biologisch inspirierte Form der Intelligenzdiagnostik als potentieller Lösungsansatz vorgeschlagen. Wir zeigen die Bedeutung elementarer kognitiver Prozesse auf (insbesondere Arbeitsgedächtniskapazität, Aufmerksamkeit, Verarbeitungsgeschwindigkeit), die individuellen Leistungsunterschieden zu Grunde liegen, und betonen, dass der Unterscheidung zwischen Inhalten und Prozessen eine zentrale, jedoch oft vernachlässigte Rolle in der Diagnostik allgemeiner kognitiver Leistungsunterschiede zukommt. Während aus kognitions- und neuropsychologischer Sicht davon ausgegangen werden kann, dass sich insbesondere Prozesse für interkulturelle Vergleiche eignen, sollten Inhalte als stärker kulturspezifisch verstanden werden. Darauf aufbauend diskutieren wir drei verschiedene Ansätze zur Verbesserung interkultureller Vergleichbarkeit der Intelligenzdiagnostik sowie deren Grenzen. Wir postulieren, dass sich die Intelligenzforschung im Austausch mit verschiedenen Disziplinen stärker auf die Identifikation von generellen kognitiven Prozessen fokussieren sollte und diskutieren das Potenzial zukünftiger Forschung hin zu einer prozessorientierten und biologisch inspirierten Intelligenzdiagnostik. Schließlich zeigen wir derzeitige Möglichkeiten auf, gehen aber auch auf etwaige Herausforderungen ein und beleuchten Implikationen für die zukünftige Intelligenzdiagnostik und -forschung.
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Affiliation(s)
| | - Kirsten Hilger
- Institut für Psychologie, Universität Würzburg, Deutschland
| | | | - Anna-Lena Schubert
- Psychologisches Institut, Universität Heidelberg, Deutschland
- Psychologisches Institut, Universität Mainz, Deutschland
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Jiang F, Jin H, Gao Y, Xie X, Cummings J, Raj A, Nagarajan S. Time-varying dynamic network model for dynamic resting state functional connectivity in fMRI and MEG imaging. Neuroimage 2022; 254:119131. [PMID: 35337963 PMCID: PMC9942947 DOI: 10.1016/j.neuroimage.2022.119131] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 02/04/2022] [Accepted: 03/21/2022] [Indexed: 01/26/2023] Open
Abstract
Dynamic resting state functional connectivity (RSFC) characterizes fluctuations that occur over time in functional brain networks. Existing methods to extract dynamic RSFCs, such as sliding-window and clustering methods that are inherently non-adaptive, have various limitations such as high-dimensionality, an inability to reconstruct brain signals, insufficiency of data for reliable estimation, insensitivity to rapid changes in dynamics, and a lack of generalizability across multiply functional imaging modalities. To overcome these deficiencies, we develop a novel and unifying time-varying dynamic network (TVDN) framework for examining dynamic resting state functional connectivity. TVDN includes a generative model that describes the relation between a low-dimensional dynamic RSFC and the brain signals, and an inference algorithm that automatically and adaptively learns the low-dimensional manifold of dynamic RSFC and detects dynamic state transitions in data. TVDN is applicable to multiple modalities of functional neuroimaging such as fMRI and MEG/EEG. The estimated low-dimensional dynamic RSFCs manifold directly links to the frequency content of brain signals. Hence we can evaluate TVDN performance by examining whether learnt features can reconstruct observed brain signals. We conduct comprehensive simulations to evaluate TVDN under hypothetical settings. We then demonstrate the application of TVDN with real fMRI and MEG data, and compare the results with existing benchmarks. Results demonstrate that TVDN is able to correctly capture the dynamics of brain activity and more robustly detect brain state switching both in resting state fMRI and MEG data.
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Affiliation(s)
- Fei Jiang
- Department of Epidemiology and Biostatistics, University of California, San Francisco, CA 94158, USA.
| | - Huaqing Jin
- Department of Statistics and Actuarial Science, the University of Hong Kong, CN, Hong Kong
| | - Yijing Gao
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158, USA
| | - Xihe Xie
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158, USA
| | - Jennifer Cummings
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158, USA
| | - Ashish Raj
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158, USA.
| | - Srikantan Nagarajan
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94158, USA.
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92
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Aili X, Wang W, Zhang A, Jiao Z, Li X, Rao B, Li R, Li H. Rich-Club Analysis of Structural Brain Network Alterations in HIV Positive Patients With Fully Suppressed Plasma Viral Loads. Front Neurol 2022; 13:825177. [PMID: 35812120 PMCID: PMC9263507 DOI: 10.3389/fneur.2022.825177] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 05/23/2022] [Indexed: 11/13/2022] Open
Abstract
ObjectiveEven with successful combination antiretroviral therapy (cART), patients with human immunodeficiency virus positive (HIV+) continue to present structural alterations and neuropsychological impairments. The purpose of this study is to investigate structural brain connectivity alterations and identify the hub regions in HIV+ patients with fully suppressed plasma viral loads.MethodsIn this study, we compared the brain structural connectivity in 48 patients with HIV+ treated with a combination of antiretroviral therapy and 48 healthy controls, using diffusion tensor imaging. Further comparisons were made in 24 patients with asymptomatic neurocognitive impairment (ANI) and 24 individuals with non-HIV-associated neurocognitive disorders forming a subset of HIV+ patients. The graph theory model was used to establish the topological metrics. Rich-club analysis was used to identify hub nodes across groups and abnormal rich-club connections. Correlations of connectivity metrics with cognitive performance and clinical variables were investigated as well.ResultsAt the regional level, HIV+ patients demonstrated lower degree centrality (DC), betweenness centrality (BC), and nodal efficiency (NE) at the occipital lobe and the limbic cortex; and increased BC and nodal cluster coefficient (NCC) in the occipital lobe, the frontal lobe, the insula, and the thalamus. The ANI group demonstrated a significant reduction in the DC, NCC, and NE in widespread brain regions encompassing the occipital lobe, the frontal lobe, the temporal pole, and the limbic system. These results did not survive the Bonferroni correction. HIV+ patients and the ANI group had similar hub nodes that were mainly located in the occipital lobe and subcortical regions. The abnormal connections were mainly located in the occipital lobe in the HIV+ group and in the parietal lobe in the ANI group. The BC in the calcarine fissure was positively correlated with complex motor skills. The disease course was negatively correlated with NE in the middle occipital gyrus.ConclusionThe results suggest that the occipital lobe and the subcortical regions may be important in structural connectivity alterations and cognitive impairment. Rich-club analysis may contribute to our understanding of the neuropathology of HIV-associated neurocognitive disorders.
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Affiliation(s)
- Xire Aili
- Beijing Advanced Innovation Center for Biomedical Engineering, Beihang University, Beijing, China
- Department of Radiology, Beijing Youan Hospital, Capital Medical University, Beijing, China
| | - Wei Wang
- Department of Radiology, Beijing Youan Hospital, Capital Medical University, Beijing, China
| | - Aidong Zhang
- Department of Radiology, Beijing Youan Hospital, Capital Medical University, Beijing, China
| | - Zengxin Jiao
- Department of Radiology, Beijing Youan Hospital, Capital Medical University, Beijing, China
| | - Xing Li
- Department of Radiology, Beijing Youan Hospital, Capital Medical University, Beijing, China
| | - Bo Rao
- Department of Radiology, Zhongnan Hospital of Wuhan University, Wuhan University, Wuhan, China
- Bo Rao
| | - Ruili Li
- Department of Radiology and Nuclear Medicine, Xuanwu Hospital, Capital Medical University, Beijing, China
- Ruili Li
| | - Hongjun Li
- Beijing Advanced Innovation Center for Biomedical Engineering, Beihang University, Beijing, China
- Department of Radiology, Beijing Youan Hospital, Capital Medical University, Beijing, China
- *Correspondence: Hongjun Li
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93
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Liu M, Amey RC, Backer RA, Simon JP, Forbes CE. Behavioral Studies Using Large-Scale Brain Networks – Methods and Validations. Front Hum Neurosci 2022; 16:875201. [PMID: 35782044 PMCID: PMC9244405 DOI: 10.3389/fnhum.2022.875201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Accepted: 05/17/2022] [Indexed: 11/13/2022] Open
Abstract
Mapping human behaviors to brain activity has become a key focus in modern cognitive neuroscience. As methods such as functional MRI (fMRI) advance cognitive scientists show an increasing interest in investigating neural activity in terms of functional connectivity and brain networks, rather than activation in a single brain region. Due to the noisy nature of neural activity, determining how behaviors are associated with specific neural signals is not well-established. Previous research has suggested graph theory techniques as a solution. Graph theory provides an opportunity to interpret human behaviors in terms of the topological organization of brain network architecture. Graph theory-based approaches, however, only scratch the surface of what neural connections relate to human behavior. Recently, the development of data-driven methods, e.g., machine learning and deep learning approaches, provide a new perspective to study the relationship between brain networks and human behaviors across the whole brain, expanding upon past literatures. In this review, we sought to revisit these data-driven approaches to facilitate our understanding of neural mechanisms and build models of human behaviors. We start with the popular graph theory approach and then discuss other data-driven approaches such as connectome-based predictive modeling, multivariate pattern analysis, network dynamic modeling, and deep learning techniques that quantify meaningful networks and connectivity related to cognition and behaviors. Importantly, for each topic, we discuss the pros and cons of the methods in addition to providing examples using our own data for each technique to describe how these methods can be applied to real-world neuroimaging data.
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Affiliation(s)
- Mengting Liu
- School of Biomedical Engineering, Sun Yat-sen University, Shenzhen, China
- Mengting Liu,
| | - Rachel C. Amey
- Department of Psychological and Brain Sciences, University of Delaware, Newark, DE, United States
- *Correspondence: Rachel C. Amey,
| | - Robert A. Backer
- Department of Psychological and Brain Sciences, University of Delaware, Newark, DE, United States
| | - Julia P. Simon
- Keck School of Medicine, University of Southern California, Los Angeles, CA, United States
| | - Chad E. Forbes
- Department of Psychology, Florida Atlantic University, Boca Raton, FL, United States
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Medaglia JD, Erickson BA, Pustina D, Kelkar AS, DeMarco AT, Dickens JV, Turkeltaub PE. Simulated Attack Reveals How Lesions Affect Network Properties in Poststroke Aphasia. J Neurosci 2022; 42:4913-4926. [PMID: 35545436 PMCID: PMC9188386 DOI: 10.1523/jneurosci.1163-21.2022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2021] [Revised: 02/17/2022] [Accepted: 02/18/2022] [Indexed: 11/21/2022] Open
Abstract
Aphasia is a prevalent cognitive syndrome caused by stroke. The rarity of premorbid imaging and heterogeneity of lesion obscures the links between the local effects of the lesion, global anatomic network organization, and aphasia symptoms. We applied a simulated attack approach in humans to examine the effects of 39 stroke lesions (16 females) on anatomic network topology by simulating their effects in a control sample of 36 healthy (15 females) brain networks. We focused on measures of global network organization thought to support overall brain function and resilience in the whole brain and within the left hemisphere. After removing lesion volume from the network topology measures and behavioral scores [the Western Aphasia Battery Aphasia Quotient (WAB-AQ), four behavioral factor scores obtained from a neuropsychological battery, and a factor sum], we compared the behavioral variance accounted for by simulated poststroke connectomes to that observed in the randomly permuted data. Global measures of anatomic network topology in the whole brain and left hemisphere accounted for 10% variance or more of the WAB-AQ and the lexical factor score beyond lesion volume and null permutations. Streamline networks provided more reliable point estimates than FA networks. Edge weights and network efficiency were weighted most highly in predicting the WAB-AQ for FA networks. Overall, our results suggest that global network measures provide modest statistical value beyond lesion volume when predicting overall aphasia severity, but less value in predicting specific behaviors. Variability in estimates could be induced by premorbid ability, deafferentation and diaschisis, and neuroplasticity following stroke.SIGNIFICANCE STATEMENT Poststroke, the remaining neuroanatomy maintains cognition and supports recovery. However, studies often use small, cross-sectional samples that cannot fully model the interactions between lesions and other variables that affect networks in stroke. Alternate methods are required to account for these effects. "Simulated attack" models are computational approaches that apply virtual damage to the brain and measure their putative consequences. Using a simulated attack model, we estimated how simulated damage to anatomic networks could account for language performance. Overall, our results reveal that global network measures can provide modest statistical value predicting overall aphasia severity, but less value in predicting specific behaviors. These findings suggest that more theoretically precise network models could be necessary to robustly predict individual outcomes in aphasia.
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Affiliation(s)
- John D Medaglia
- Department of Psychology, Drexel University, Philadelphia, Pennsylvania 19104
- Department of Neurology, Drexel University, Philadelphia, Pennsylvania 19104
- Department of Neurology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - Brian A Erickson
- Department of Psychology, Drexel University, Philadelphia, Pennsylvania 19104
| | - Dorian Pustina
- Cure Huntingdon's Disease Initiative (CHDI) Foundation, Princeton, New Jersey 08540
| | - Apoorva S Kelkar
- Department of Psychology, Drexel University, Philadelphia, Pennsylvania 19104
| | - Andrew T DeMarco
- Department of Neurology, Georgetown University, Washington, DC 20007
| | - J Vivian Dickens
- Department of Neurology, Georgetown University, Washington, DC 20007
| | - Peter E Turkeltaub
- Department of Neurology, Georgetown University, Washington, DC 20007
- MedStar National Rehabilitation Hospital, Washington, DC 20007
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95
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White matter substrates of functional connectivity dynamics in the human brain. Neuroimage 2022; 258:119391. [PMID: 35716842 DOI: 10.1016/j.neuroimage.2022.119391] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 06/06/2022] [Accepted: 06/09/2022] [Indexed: 11/22/2022] Open
Abstract
The contribution of structural connectivity to functional connectivity dynamics is still far from being elucidated. Herein, we applied track-weighted dynamic functional connectivity (tw-dFC), a model integrating structural, functional, and dynamic connectivity, on high quality diffusion weighted imaging and resting-state fMRI data from two independent repositories. The tw-dFC maps were analyzed using independent component analysis, aiming at identifying spatially independent white matter components which support dynamic changes in functional connectivity. Each component consisted of a spatial map of white matter bundles that show consistent fluctuations in functional connectivity at their endpoints, and a time course representative of such functional activity. These components show high intra-subject, inter-subject, and inter-cohort reproducibility. We provided also converging evidence that functional information about white matter activity derived by this method can capture biologically meaningful features of brain connectivity organization, as well as predict higher-order cognitive performance.
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Wang P, Li W, Zhu H, Liu X, Yu T, Zhang D, Zhang Y. Reorganization of the Brain Structural Covariance Network in Ischemic Moyamoya Disease Revealed by Graph Theoretical Analysis. Front Aging Neurosci 2022; 14:788661. [PMID: 35721027 PMCID: PMC9201423 DOI: 10.3389/fnagi.2022.788661] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2021] [Accepted: 04/19/2022] [Indexed: 11/13/2022] Open
Abstract
ObjectiveIschemic moyamoya (MMD) disease could alter the cerebral structure, but little is known about the topological organization of the structural covariance network (SCN). This study employed structural magnetic resonance imaging and graph theory to evaluate SCN reorganization in ischemic MMD patients.MethodForty-nine stroke-free ischemic MMD patients and 49 well-matched healthy controls (HCs) were examined by T1-MPRAGE imaging. Structural images were pre-processed using the Computational Anatomy Toolbox 12 (CAT 12) based on the diffeomorphic anatomical registration through exponentiated lie (DARTEL) algorithm and both the global and regional SCN parameters were calculated and compared using the Graph Analysis Toolbox (GAT).ResultsMost of the important metrics of global network organization, including characteristic path length (Lp), clustering coefficient (Cp), assortativity, local efficiency, and transitivity, were significantly reduced in MMD patients compared with HCs. In addition, the regional betweenness centrality (BC) values of the bilateral medial orbitofrontal cortices were significantly lower in MMD patients than in HCs after false discovery rate (FDR) correction for multiple comparisons. The BC was also reduced in the left medial superior frontal gyrus and hippocampus, and increased in the bilateral middle cingulate gyri of patients, but these differences were not significant after FDR correlation. No differences in network resilience were detected by targeted attack analysis or random failure analysis.ConclusionsBoth global and regional properties of the SCN are altered in MMD, even in the absence of major stroke or hemorrhagic damage. Patients exhibit a less optimal and more randomized SCN than HCs, and the nodal BC of the bilateral medial orbitofrontal cortices is severely reduced. These changes may account for the cognitive impairments in MMD patients.
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Affiliation(s)
- Peijing Wang
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing, China
- Center of Stroke, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing, China
| | - Wenjie Li
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing, China
- Center of Stroke, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing, China
| | - Huan Zhu
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing, China
- Center of Stroke, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing, China
| | - Xingju Liu
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing, China
- Center of Stroke, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing, China
| | - Tao Yu
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing, China
- Center of Stroke, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing, China
| | - Dong Zhang
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing, China
- Center of Stroke, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing, China
| | - Yan Zhang
- Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
- China National Clinical Research Center for Neurological Diseases, Beijing, China
- Center of Stroke, Beijing Institute for Brain Disorders, Beijing, China
- Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing, China
- *Correspondence: Yan Zhang,
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97
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98
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Zamani Esfahlani F, Faskowitz J, Slack J, Mišić B, Betzel RF. Local structure-function relationships in human brain networks across the lifespan. Nat Commun 2022; 13:2053. [PMID: 35440659 PMCID: PMC9018911 DOI: 10.1038/s41467-022-29770-y] [Citation(s) in RCA: 74] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2021] [Accepted: 03/29/2022] [Indexed: 12/13/2022] Open
Abstract
A growing number of studies have used stylized network models of communication to predict brain function from structure. Most have focused on a small set of models applied globally. Here, we compare a large number of models at both global and regional levels. We find that globally most predictors perform poorly. At the regional level, performance improves but heterogeneously, both in terms of variance explained and the optimal model. Next, we expose synergies among predictors by using pairs to jointly predict FC. Finally, we assess age-related differences in global and regional coupling across the human lifespan. We find global decreases in the magnitude of structure-function coupling with age. We find that these decreases are driven by reduced coupling in sensorimotor regions, while higher-order cognitive systems preserve local coupling with age. Our results describe patterns of structure-function coupling across the cortex and how this may change with age.
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Affiliation(s)
- Farnaz Zamani Esfahlani
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, 47405, USA
| | - Joshua Faskowitz
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, 47405, USA
- Program in Neuroscience, Indiana University, Bloomington, IN, 47405, USA
| | - Jonah Slack
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, 47405, USA
| | - Bratislav Mišić
- McConnell Brain Imaging Centre, Montréal Neurological Institute, McGill University, Montréal, QC, Canada
| | - Richard F Betzel
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN, 47405, USA.
- Program in Neuroscience, Indiana University, Bloomington, IN, 47405, USA.
- Cognitive Science Program, Indiana University, Bloomington, IN, 47405, USA.
- Network Science Institute, Indiana University, Bloomington, IN, 47405, USA.
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99
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Schellekens W, Bakker C, Ramsey NF, Petridou N. Moving in on human motor cortex. Characterizing the relationship between body parts with non-rigid population response fields. PLoS Comput Biol 2022; 18:e1009955. [PMID: 35377877 PMCID: PMC9009778 DOI: 10.1371/journal.pcbi.1009955] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 04/14/2022] [Accepted: 02/22/2022] [Indexed: 11/18/2022] Open
Abstract
For cortical motor activity, the relationships between different body part representations is unknown. Through reciprocal body part relationships, functionality of cortical motor areas with respect to whole body motor control can be characterized. In the current study, we investigate the relationship between body part representations within individual neuronal populations in motor cortices, following a 7 Tesla fMRI 18-body-part motor experiment in combination with our newly developed non-rigid population Response Field (pRF) model and graph theory. The non-rigid pRF metrics reveal somatotopic structures in all included motor cortices covering frontal, parietal, medial and insular cortices and that neuronal populations in primary sensorimotor cortex respond to fewer body parts than secondary motor cortices. Reciprocal body part relationships are estimated in terms of uniqueness, clique-formation, and influence. We report unique response profiles for the knee, a clique of body parts surrounding the ring finger, and a central role for the shoulder and wrist. These results reveal associations among body parts from the perspective of the central nervous system, while being in agreement with intuitive notions of body part usage.
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Affiliation(s)
- Wouter Schellekens
- Department of Neurology and Neurosurgery, Brain Center, UMC Utrecht, Utrecht, Netherlands
- Radiology department, Center for Image Sciences, UMC Utrecht, Utrecht, Netherlands
| | - Carlijn Bakker
- Department of Neurology and Neurosurgery, Brain Center, UMC Utrecht, Utrecht, Netherlands
| | - Nick F. Ramsey
- Department of Neurology and Neurosurgery, Brain Center, UMC Utrecht, Utrecht, Netherlands
| | - Natalia Petridou
- Radiology department, Center for Image Sciences, UMC Utrecht, Utrecht, Netherlands
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100
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Saberi A, Aldenkamp AP, Kurniawan NA, Bouten CVC. In-vitro engineered human cerebral tissues mimic pathological circuit disturbances in 3D. Commun Biol 2022; 5:254. [PMID: 35322168 PMCID: PMC8943047 DOI: 10.1038/s42003-022-03203-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 03/01/2022] [Indexed: 12/30/2022] Open
Abstract
In-vitro modeling of brain network disorders such as epilepsy remains a major challenge. A critical step is to develop an experimental approach that enables recapitulation of in-vivo-like three-dimensional functional complexity while allowing local modulation of the neuronal networks. Here, by promoting matrix-supported active cell reaggregation, we engineered multiregional cerebral tissues with intact 3D neuronal networks and functional interconnectivity characteristic of brain networks. Furthermore, using a multi-chambered tissue-culture chip, we show that our separated but interconnected cerebral tissues can mimic neuropathological signatures such as the propagation of epileptiform discharges. A method is developed to engineer cerebral tissues with intact 3D neuronal networks, mimicking neuropathological signatures such as the propagation of epileptiform discharges, using a multi-chambered tissue culture chip.
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Affiliation(s)
- Aref Saberi
- Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, the Netherlands. .,Institute for Complex Molecular Systems, Eindhoven, the Netherlands.
| | - Albert P Aldenkamp
- School for Mental Health and Neuroscience, Maastricht University Medical Center, Maastricht, the Netherlands.,Department of Behavioral Sciences, Epilepsy Center Kempenhaeghe, Heeze, the Netherlands.,Department of Electrical Engineering, Eindhoven University of Technology, Eindhoven, the Netherlands
| | - Nicholas A Kurniawan
- Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, the Netherlands. .,Institute for Complex Molecular Systems, Eindhoven, the Netherlands.
| | - Carlijn V C Bouten
- Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, the Netherlands.,Institute for Complex Molecular Systems, Eindhoven, the Netherlands
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