151
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Spadari S, Sgaramella V, Mazza G, Falaschi A. Enzymic purification of a hybrid between ribosomal ribonucleic acid and deoxyribonucleic acid. EUROPEAN JOURNAL OF BIOCHEMISTRY 1971; 19:294-300. [PMID: 4994749 DOI: 10.1111/j.1432-1033.1971.tb01318.x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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152
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Vancura P, Sharp GW, Malt RA. Kinetics of RNA synthesis in toad bladder epithelium: action of aldosterone during the latent period. J Clin Invest 1971; 50:543-51. [PMID: 5545120 PMCID: PMC291961 DOI: 10.1172/jci106523] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
Processing of RNA in the toad bladder was analyzed by polyacrylamide-gel electrophoresis to determine whether aldosterone causes any changes in the 1 hr before it potentiates transport of sodium ion. No change was found in the quantity or in the specific activity of bulk RNA labeled with uridine-5-(3)H. In vivo and in vitro with either uridine-5-(3)H or with methionine-(methyl)-(3)H as precursors, processing of RNA was extremely slow. Heterodisperse RNA was obvious after 30 min of continuous labeling, but labeling of the 40S precursor of ribosomal RNA was not apparent for 60 min. Labeling of mature 28S and 18S RNA first became apparent after 8 hr. approximately 7S RNA was the principal fastmigrating species labeled at 30 min, and 4S RNA was not heavily labeled until 1 hr. Aldosterone (5 x 10(-7) mole/liter) produced no changes. If care were not taken to inhibit metabolism of native bacteria colonizing the bladder, bacterial RNA of high specific activity predominated. We conclude that RNA metabolism in the toad bladder is extraordinarily slow, that a major acceleration of de novo synthesis in response to physiologic doses of aldosterone was not demonstrable, and that some reports to the contrary may have been influenced by artifacts from bacterial RNA metabolism. Earlier evidence for obligatory alterations in RNA metabolism during the latent period is not strong.
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153
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Parsons JT, Gardner J, Green M. Biochemical studies on adenovirus multiplication, XIX. Resolution of late viral RNA species in the nucleus and cytoplasm. Proc Natl Acad Sci U S A 1971; 68:557-60. [PMID: 5276761 PMCID: PMC388987 DOI: 10.1073/pnas.68.3.557] [Citation(s) in RCA: 52] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
Late after infection of cultured human cells (KB) with adenovirus type 2, the nucleus contains heterogeneous viral RNA species ranging in size from 10 to 43 S. Four viral RNA species found in the nucleus (36, 38, 40, and 43 S) are synthesized predominantly during a 15-min labeling period with [(3)H]uridine, while smaller RNA species accumulate when labeling is continued for longer periods. In contrast, 6-8 viral RNA species, of sedimentation coefficient from 10 to 29 S, are found in the cytoplasm after a 30-min pulse label and a 2-hr chase. DNA-RNA hybridization-competition experiments demonstrate that viral RNA sequences present in nuclear 36-43S RNA are also present in cytoplasmic and polyribosomal RNA, suggesting that at least some of the cytoplasmic viral-specific RNA molecules are derived by cleavage of high molecular weight precursors from the nucleus.
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154
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Colli W, Smith I, Oishi M. Physical linkage between 5 s, 16 s and 23 s ribosomal RNA genes in Bacillus subtilis. J Mol Biol 1971; 56:117-27. [PMID: 4995655 DOI: 10.1016/0022-2836(71)90088-x] [Citation(s) in RCA: 41] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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155
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Sconzo G, Vitrano E, Bono A, Di Giovanni L, Mutolo V, Giudice G. Synthesis of rRNA in sea urchin embryos. IV. Maturation of rRNA precursor. BIOCHIMICA ET BIOPHYSICA ACTA 1971; 232:132-9. [PMID: 5575171 DOI: 10.1016/0005-2787(71)90497-7] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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156
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157
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Polito L, Graziani F, Boncinelli E, Malva C, Ritossa F. DNA circularization: a molecular approach for the detection and isolation of tandemly duplicated genes. NATURE: NEW BIOLOGY 1971; 229:84-6. [PMID: 5280341 DOI: 10.1038/newbio229084a0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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159
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160
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161
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162
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Birnstiel ML, Chipchase M, Speirs J. The ribosomal RNA cistrons. PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1971; 11:351-89. [PMID: 5004308 DOI: 10.1016/s0079-6603(08)60332-3] [Citation(s) in RCA: 202] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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163
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Maden B. The structure and formation of ribosomes in animal cells. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 1971. [DOI: 10.1016/0079-6107(71)90007-1] [Citation(s) in RCA: 105] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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164
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Burdon RH. Ribonucleic acid maturation in animal cells. PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 1971; 11:33-79. [PMID: 5145747 DOI: 10.1016/s0079-6603(08)60325-6] [Citation(s) in RCA: 81] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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165
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166
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Miller L, Knowland J. Reduction of ribosomal RNA synthesis and ribosomal RNA genes in a mutant of Xenopus laevis which organizes only a partial nucleolus. II. The number of ribosomal RNA genes in animals of different nucleolar types. J Mol Biol 1970; 53:329-38. [PMID: 5493280 DOI: 10.1016/0022-2836(70)90069-0] [Citation(s) in RCA: 63] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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167
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Knowland J, Miller L. Reduction of ribosomal RNA synthesis and ribosomal RNA genes in a mutant of Xenopus laevis which organizes only a partial nucleolus. I. Ribosomal RNA synthesis in embryos of different nucleolar types. J Mol Biol 1970; 53:321-8. [PMID: 5500443 DOI: 10.1016/0022-2836(70)90068-9] [Citation(s) in RCA: 35] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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168
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169
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170
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Higashi K, Gotoh S, Matsuhisa T, Tateishi N, Sakamoto Y. Comparison of the partial sequences of nucleolar and cytoplasmic RNA's of rat liver. BIOCHIMICA ET BIOPHYSICA ACTA 1970; 217:408-17. [PMID: 5473191 DOI: 10.1016/0005-2787(70)90538-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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171
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Crippa M. Regulatory factor for the transcription of the ribosomal genes in amphibian oocytes. Nature 1970; 227:1138-40. [PMID: 5451108 DOI: 10.1038/2271138a0] [Citation(s) in RCA: 44] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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Abstract
A great deal of information about evolutionary events and processes has been inferred from careful studies of fossil records. Other forms of evidence have also contributed greatly to the understanding of evolution. Comparative biochemistry (Florkin, 1949), immunology (Boyden, 1942), protein sequencing (Dayoff, 1969; Anfinsen, 1959), and early DNA studies (McCarthy & Bolton, 1963; Schildkraut, Marmur & Doty, 1961) have for the most part corroborated earlier evolutionary findings, and at the same time provided new understanding of molecular processes in evolution. Of these approaches the comparison of DNA seems most promising since a relatively precise quantitative comparison can be made of all of the genetic material of different species.
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Reeder RH, Brown DD. Transcription of the ribosomal RNA genes of an amphibian by the RNA polymerase of a bacterium. J Mol Biol 1970; 51:361-77. [PMID: 4922203 DOI: 10.1016/0022-2836(70)90148-8] [Citation(s) in RCA: 77] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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174
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Dawid IB, Brown DD, Reeder RH. Composition and structure of chromosomal and amplified ribosomal DNA's of Xenopus laevis. J Mol Biol 1970; 51:341-60. [PMID: 5485907 DOI: 10.1016/0022-2836(70)90147-6] [Citation(s) in RCA: 237] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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175
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Siegel A, Huber R. Complementary regions to tobacco mosaic virus RNA in host DNA. Biochem Biophys Res Commun 1970; 40:350-5. [PMID: 5474788 DOI: 10.1016/0006-291x(70)91016-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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176
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Purdom I, Bishop JO, Birnstiel ML. Scattered arrangement of the bacterial ribosomal cistrons. Nature 1970; 227:239-42. [PMID: 4913638 DOI: 10.1038/227239a0] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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177
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Lusby EW, Kloet SR. A simple procedure for the partial purification of yeast DNA homologous to ribosomal RNA. BIOCHIMICA ET BIOPHYSICA ACTA 1970; 209:263-5. [PMID: 5421972 DOI: 10.1016/0005-2787(70)90685-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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178
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Knowland JS. Polyacrylamide gel electrophoresis of nucleic acids synthesised during the early development of Xenopus laevis Daudin. BIOCHIMICA ET BIOPHYSICA ACTA 1970; 204:416-29. [PMID: 5441188 DOI: 10.1016/0005-2787(70)90162-0] [Citation(s) in RCA: 36] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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179
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Quagliarotti G, Hidvegi E, Wikman J, Busch H. Structural Analysis of Nucleolar Precursors of Ribosomal Ribonucleic Acid. J Biol Chem 1970. [DOI: 10.1016/s0021-9258(18)63192-8] [Citation(s) in RCA: 48] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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180
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Dubin DT, Montenecourt BS. Mitochondrial RNA from cultured animal cells. Distinctive high-molecular-weight and 4 s species. J Mol Biol 1970; 48:279-95. [PMID: 4194497 DOI: 10.1016/0022-2836(70)90161-0] [Citation(s) in RCA: 80] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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182
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183
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Perry RP, Cheng TY, Freed JJ, Greenberg JR, Kelley DE, Tartof KD. Evolution of the transcription unit of ribosomal RNA. Proc Natl Acad Sci U S A 1970; 65:609-16. [PMID: 5267142 PMCID: PMC282950 DOI: 10.1073/pnas.65.3.609] [Citation(s) in RCA: 80] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
In eukaryotes the two principal RNA components of the ribosomes are initially synthesized as a large complex precursor molecule, which may be thought of as a transcription unit. The precursor is converted, via intermediates, to the mature forms of ribosomal RNA (rRNA). In order to assess the extent of variation in the size of this rRNA transcription unit among different organisms, and to infer its possible mode of evolution, we have determined its molecular weight in several selected species. Pulse-labeled and long-term labeled RNA's were extracted from various types of cells, and analyzed by electrophoresis on acrylamide gels. Identification of particular components as rRNA precursors was made according to several stated criteria. Our results, together with an analysis of previously published data, suggest that in plants and lower animals, up to and including reptiles, the unit of transcription of rRNA is a 2.7-2.8 million dalton molecule, which is only about 25 per cent larger than its combined rRNA products. In contrast, birds, marsupials and placental mammals, exhibit a seemingly less economical form of rRNA synthesis. Their transcription units are 4.0-4.2 million daltons, about 80 per cent larger than the rRNA products. In the organisms with the smaller transcription unit the major intermediate precursor of rRNA is 1.5-1.6 million daltons, as compared to 2.0-2.2 million daltons in birds and mammals. The significance of these findings is discussed in relation to evolutionary changes in the base composition of the ribosomal RNA genes.
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Votavová H, Sponar J, Sormová Z. Isolation and properties of rapidly renaturing fractions of DNA from calf tissues. EUROPEAN JOURNAL OF BIOCHEMISTRY 1970; 12:208-16. [PMID: 4318902 DOI: 10.1111/j.1432-1033.1970.tb00839.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Comings DE, Mattoccia E. Studies of microchromosomes and a G-C rich DNA satellite in the quail. Chromosoma 1970; 30:202-14. [PMID: 5426551 DOI: 10.1007/bf00282001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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188
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Developmental Biology and Genetics: A Plea for Cooperation. Curr Top Dev Biol 1970. [DOI: 10.1016/s0070-2153(08)60050-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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189
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Pardu ML, Gerbi SA, Eckhardt RA, Gall JG. Cytological localization of DNA complementary to ribosomal RNA in polytene chromosomes of Diptera. Chromosoma 1970; 29:268-90. [PMID: 4908207 DOI: 10.1007/bf00325943] [Citation(s) in RCA: 212] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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190
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Hallberg RL, Brown DD. Co-ordinated synthesis of some ribosomal proteins and ribosomal RNA in embryos of Xenopus laevis. J Mol Biol 1969; 46:393-411. [PMID: 5365957 DOI: 10.1016/0022-2836(69)90184-3] [Citation(s) in RCA: 44] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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191
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Marks F, Hidvegi EJ, Yazdi E, Busch H. Isotope content of oligonucleotides of nuclear and nucleolar RNA of rat liver. BIOCHIMICA ET BIOPHYSICA ACTA 1969; 195:340-50. [PMID: 5366925 DOI: 10.1016/0005-2787(69)90641-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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192
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Sgaramella V. Enrichment of Bacillus subtilis DNA in the sequences for ribosomal RNA. BIOCHIMICA ET BIOPHYSICA ACTA 1969; 195:466-72. [PMID: 4983706 DOI: 10.1016/0005-2787(69)90653-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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193
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Feinendegen LE, Zajdela F. Synchrony of restricted gene transcription in mammalian sister cells in culture. VIRCHOWS ARCHIV. B, CELL PATHOLOGY 1969; 3:51-76. [PMID: 4977670 DOI: 10.1007/bf02901926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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194
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Jeanteur P, Attardi G. Relationship between HeLa cell ribosomal RNA and its precursors studied by high resolution RNA-DNA hybridization. J Mol Biol 1969; 45:305-24. [PMID: 5367031 DOI: 10.1016/0022-2836(69)90107-7] [Citation(s) in RCA: 69] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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195
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Loening UE, Jones KW, Birnstiel ML. Properties of the ribosomal RNA precursor in Xenopus laevis; comparison to the precursor in mammals and in plants. J Mol Biol 1969; 45:353-66. [PMID: 5367033 DOI: 10.1016/0022-2836(69)90110-7] [Citation(s) in RCA: 139] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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196
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Narayan KS, Birnstiel ML. Biochemical and ultrastructural characteristics of ribonucleoprotein particles isolated from rat-liver cell nucleoli. BIOCHIMICA ET BIOPHYSICA ACTA 1969; 190:470-85. [PMID: 5351278 DOI: 10.1016/0005-2787(69)90096-3] [Citation(s) in RCA: 32] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Wallace H, Clyman RI, Pierro LP. Nucleic acid deficiency in the prothanic homozygous mutant of creeper fowl. THE JOURNAL OF EXPERIMENTAL ZOOLOGY 1969; 172:245-52. [PMID: 5372813 DOI: 10.1002/jez.1401720209] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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200
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Birnstiel M, Grunstein M, Speirs J, Hennig W. Family of ribosomal genes of Xenopus laevis. Nature 1969; 223:1265-7. [PMID: 5806996 DOI: 10.1038/2231265a0] [Citation(s) in RCA: 40] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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