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For: Boettiger AN, Levine M. Synchronous and stochastic patterns of gene activation in the Drosophila embryo. Science 2009;325:471-3. [PMID: 19628867 DOI: 10.1126/science.1173976] [Citation(s) in RCA: 207] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Number Cited by Other Article(s)
151
Marks H, Kalkan T, Menafra R, Denissov S, Jones K, Hofemeister H, Nichols J, Kranz A, Francis Stewart A, Smith A, Stunnenberg H. The transcriptional and epigenomic foundations of ground state pluripotency. Cell 2012;149:590-604. [PMID: 22541430 PMCID: PMC3398752 DOI: 10.1016/j.cell.2012.03.026] [Citation(s) in RCA: 661] [Impact Index Per Article: 50.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2011] [Revised: 12/26/2011] [Accepted: 03/06/2012] [Indexed: 02/02/2023]
152
Vastenhouw NL, Schier AF. Bivalent histone modifications in early embryogenesis. Curr Opin Cell Biol 2012;24:374-86. [PMID: 22513113 DOI: 10.1016/j.ceb.2012.03.009] [Citation(s) in RCA: 211] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2012] [Revised: 03/13/2012] [Accepted: 03/14/2012] [Indexed: 02/08/2023]
153
Transcription goes digital. EMBO Rep 2012;13:313-21. [PMID: 22410830 DOI: 10.1038/embor.2012.31] [Citation(s) in RCA: 70] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2011] [Accepted: 02/23/2012] [Indexed: 12/21/2022]  Open
154
Cheng B, Li T, Rahl PB, Adamson TE, Loudas NB, Guo J, Varzavand K, Cooper JJ, Hu X, Gnatt A, Young RA, Price DH. Functional association of Gdown1 with RNA polymerase II poised on human genes. Mol Cell 2012;45:38-50. [PMID: 22244331 DOI: 10.1016/j.molcel.2011.10.022] [Citation(s) in RCA: 107] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2011] [Revised: 08/05/2011] [Accepted: 10/20/2011] [Indexed: 10/14/2022]
155
Analytical distribution and tunability of noise in a model of promoter progress. Biophys J 2012;102:1247-57. [PMID: 22455907 DOI: 10.1016/j.bpj.2012.02.001] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2011] [Revised: 01/31/2012] [Accepted: 02/02/2012] [Indexed: 12/27/2022]  Open
156
Multiple exposures to drought 'train' transcriptional responses in Arabidopsis. Nat Commun 2012;3:740. [PMID: 22415831 DOI: 10.1038/ncomms1732] [Citation(s) in RCA: 349] [Impact Index Per Article: 26.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2011] [Accepted: 02/06/2012] [Indexed: 11/08/2022]  Open
157
Nguyen D, Krueger BJ, Sedore SC, Brogie JE, Rogers JT, Rajendra TK, Saunders A, Matera AG, Lis JT, Uguen P, Price DH. The Drosophila 7SK snRNP and the essential role of dHEXIM in development. Nucleic Acids Res 2012;40:5283-97. [PMID: 22379134 PMCID: PMC3384314 DOI: 10.1093/nar/gks191] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
158
Reeves GT, Trisnadi N, Truong TV, Nahmad M, Katz S, Stathopoulos A. Dorsal-ventral gene expression in the Drosophila embryo reflects the dynamics and precision of the dorsal nuclear gradient. Dev Cell 2012;22:544-57. [PMID: 22342544 DOI: 10.1016/j.devcel.2011.12.007] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2011] [Revised: 10/25/2011] [Accepted: 12/14/2011] [Indexed: 11/24/2022]
159
He F, Ren J, Wang W, Ma J. Evaluating the Drosophila Bicoid morphogen gradient system through dissecting the noise in transcriptional bursts. ACTA ACUST UNITED AC 2012;28:970-5. [PMID: 22302571 DOI: 10.1093/bioinformatics/bts068] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
160
Dillon N. Factor mediated gene priming in pluripotent stem cells sets the stage for lineage specification. Bioessays 2012;34:194-204. [DOI: 10.1002/bies.201100137] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
161
Transcriptional activators and activation mechanisms. Protein Cell 2011;2:879-88. [PMID: 22180087 DOI: 10.1007/s13238-011-1101-7] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2011] [Accepted: 08/22/2011] [Indexed: 10/14/2022]  Open
162
Ludwig MZ, Manu, Kittler R, White KP, Kreitman M. Consequences of eukaryotic enhancer architecture for gene expression dynamics, development, and fitness. PLoS Genet 2011;7:e1002364. [PMID: 22102826 PMCID: PMC3213169 DOI: 10.1371/journal.pgen.1002364] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2011] [Accepted: 09/14/2011] [Indexed: 12/13/2022]  Open
163
Bothma JP, Magliocco J, Levine M. The snail repressor inhibits release, not elongation, of paused Pol II in the Drosophila embryo. Curr Biol 2011;21:1571-7. [PMID: 21920753 DOI: 10.1016/j.cub.2011.08.019] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2011] [Revised: 07/11/2011] [Accepted: 08/08/2011] [Indexed: 12/25/2022]
164
Lin C, Garrett AS, De Kumar B, Smith ER, Gogol M, Seidel C, Krumlauf R, Shilatifard A. Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC). Genes Dev 2011;25:1486-98. [PMID: 21764852 DOI: 10.1101/gad.2059211] [Citation(s) in RCA: 149] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
165
Gene length may contribute to graded transcriptional responses in the Drosophila embryo. Dev Biol 2011;360:230-40. [PMID: 21920356 DOI: 10.1016/j.ydbio.2011.08.016] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2011] [Accepted: 08/28/2011] [Indexed: 01/22/2023]
166
Negative elongation factor accelerates the rate at which heat shock genes are shut off by facilitating dissociation of heat shock factor. Mol Cell Biol 2011;31:4232-43. [PMID: 21859888 DOI: 10.1128/mcb.05930-11] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
167
Perry MW, Boettiger AN, Levine M. Multiple enhancers ensure precision of gap gene-expression patterns in the Drosophila embryo. Proc Natl Acad Sci U S A 2011;108:13570-5. [PMID: 21825127 PMCID: PMC3158186 DOI: 10.1073/pnas.1109873108] [Citation(s) in RCA: 165] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
168
Rogers KW, Schier AF. Morphogen gradients: from generation to interpretation. Annu Rev Cell Dev Biol 2011;27:377-407. [PMID: 21801015 DOI: 10.1146/annurev-cellbio-092910-154148] [Citation(s) in RCA: 411] [Impact Index Per Article: 29.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
169
Levine M. Paused RNA polymerase II as a developmental checkpoint. Cell 2011;145:502-11. [PMID: 21565610 DOI: 10.1016/j.cell.2011.04.021] [Citation(s) in RCA: 220] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2010] [Revised: 02/18/2011] [Accepted: 04/25/2011] [Indexed: 11/18/2022]
170
Ramos AF, Innocentini GCP, Hornos JEM. Exact time-dependent solutions for a self-regulating gene. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011;83:062902. [PMID: 21797428 DOI: 10.1103/physreve.83.062902] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2010] [Indexed: 05/31/2023]
171
Saha RN, Wissink EM, Bailey ER, Zhao M, Fargo DC, Hwang JY, Daigle KR, Fenn JD, Adelman K, Dudek SM. Rapid activity-induced transcription of Arc and other IEGs relies on poised RNA polymerase II. Nat Neurosci 2011;14:848-56. [PMID: 21623364 PMCID: PMC3125443 DOI: 10.1038/nn.2839] [Citation(s) in RCA: 131] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2011] [Accepted: 04/07/2011] [Indexed: 12/31/2022]
172
Smith E, Lin C, Shilatifard A. The super elongation complex (SEC) and MLL in development and disease. Genes Dev 2011;25:661-72. [PMID: 21460034 DOI: 10.1101/gad.2015411] [Citation(s) in RCA: 268] [Impact Index Per Article: 19.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
173
Hah N, Danko CG, Core L, Waterfall JJ, Siepel A, Lis JT, Kraus WL. A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells. Cell 2011;145:622-34. [PMID: 21549415 PMCID: PMC3099127 DOI: 10.1016/j.cell.2011.03.042] [Citation(s) in RCA: 388] [Impact Index Per Article: 27.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2010] [Revised: 02/07/2011] [Accepted: 03/24/2011] [Indexed: 01/13/2023]
174
Boettiger AN, Ralph PL, Evans SN. Transcriptional regulation: effects of promoter proximal pausing on speed, synchrony and reliability. PLoS Comput Biol 2011;7:e1001136. [PMID: 21589887 PMCID: PMC3093350 DOI: 10.1371/journal.pcbi.1001136] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2010] [Accepted: 04/11/2011] [Indexed: 11/19/2022]  Open
175
He F, Ren J, Wang W, Ma J. A multiscale investigation of bicoid-dependent transcriptional events in Drosophila embryos. PLoS One 2011;6:e19122. [PMID: 21544208 PMCID: PMC3081338 DOI: 10.1371/journal.pone.0019122] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2011] [Accepted: 03/16/2011] [Indexed: 01/11/2023]  Open
176
Guertin MJ, Petesch SJ, Zobeck KL, Min IM, Lis JT. Drosophila heat shock system as a general model to investigate transcriptional regulation. COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 2011;75:1-9. [PMID: 21467139 PMCID: PMC5967404 DOI: 10.1101/sqb.2010.75.039] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
177
Min IM, Waterfall JJ, Core LJ, Munroe RJ, Schimenti J, Lis JT. Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells. Genes Dev 2011;25:742-54. [PMID: 21460038 PMCID: PMC3070936 DOI: 10.1101/gad.2005511] [Citation(s) in RCA: 252] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2010] [Accepted: 02/16/2011] [Indexed: 12/22/2022]
178
Balázsi G, van Oudenaarden A, Collins JJ. Cellular decision making and biological noise: from microbes to mammals. Cell 2011;144:910-25. [PMID: 21414483 PMCID: PMC3068611 DOI: 10.1016/j.cell.2011.01.030] [Citation(s) in RCA: 687] [Impact Index Per Article: 49.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2010] [Revised: 12/17/2010] [Accepted: 01/17/2011] [Indexed: 12/24/2022]
179
Suter DM, Molina N, Gatfield D, Schneider K, Schibler U, Naef F. Mammalian genes are transcribed with widely different bursting kinetics. Science 2011;332:472-4. [PMID: 21415320 DOI: 10.1126/science.1198817] [Citation(s) in RCA: 648] [Impact Index Per Article: 46.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
180
Little SC, Tkačik G, Kneeland TB, Wieschaus EF, Gregor T. The formation of the Bicoid morphogen gradient requires protein movement from anteriorly localized mRNA. PLoS Biol 2011;9:e1000596. [PMID: 21390295 PMCID: PMC3046954 DOI: 10.1371/journal.pbio.1000596] [Citation(s) in RCA: 135] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2010] [Accepted: 01/11/2011] [Indexed: 11/25/2022]  Open
181
Li J, Gilmour DS. Promoter proximal pausing and the control of gene expression. Curr Opin Genet Dev 2011;21:231-5. [PMID: 21324670 DOI: 10.1016/j.gde.2011.01.010] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2010] [Accepted: 01/18/2011] [Indexed: 12/18/2022]
182
Macneil LT, Walhout AJM. Gene regulatory networks and the role of robustness and stochasticity in the control of gene expression. Genome Res 2011;21:645-57. [PMID: 21324878 DOI: 10.1101/gr.097378.109] [Citation(s) in RCA: 217] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
183
Holloway DM, Lopes FJP, da Fontoura Costa L, Travençolo BAN, Golyandina N, Usevich K, Spirov AV. Gene expression noise in spatial patterning: hunchback promoter structure affects noise amplitude and distribution in Drosophila segmentation. PLoS Comput Biol 2011;7:e1001069. [PMID: 21304932 PMCID: PMC3033364 DOI: 10.1371/journal.pcbi.1001069] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2010] [Accepted: 12/28/2010] [Indexed: 01/08/2023]  Open
184
Lionnet T, Czaplinski K, Darzacq X, Shav-Tal Y, Wells AL, Chao JA, Park HY, de Turris V, Lopez-Jones M, Singer RH. A transgenic mouse for in vivo detection of endogenous labeled mRNA. Nat Methods 2011;8:165-70. [PMID: 21240280 PMCID: PMC3076588 DOI: 10.1038/nmeth.1551] [Citation(s) in RCA: 298] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2010] [Accepted: 12/10/2010] [Indexed: 01/04/2023]
185
Nechaev S, Adelman K. Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation. BIOCHIMICA ET BIOPHYSICA ACTA 2011;1809:34-45. [PMID: 21081187 PMCID: PMC3021596 DOI: 10.1016/j.bbagrm.2010.11.001] [Citation(s) in RCA: 207] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 09/03/2010] [Revised: 11/06/2010] [Accepted: 11/09/2010] [Indexed: 01/12/2023]
186
Espinosa JM. The meaning of pausing. Mol Cell 2010;40:507-8. [PMID: 21095581 DOI: 10.1016/j.molcel.2010.11.025] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
187
Xiao H, Li Y, Du J, Mosig A. Ct3d: tracking microglia motility in 3D using a novel cosegmentation approach. ACTA ACUST UNITED AC 2010;27:564-71. [PMID: 21186244 PMCID: PMC3035800 DOI: 10.1093/bioinformatics/btq691] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
188
Zobeck KL, Buckley MS, Zipfel WR, Lis JT. Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells. Mol Cell 2010;40:965-75. [PMID: 21172661 PMCID: PMC3021954 DOI: 10.1016/j.molcel.2010.11.022] [Citation(s) in RCA: 109] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2010] [Revised: 05/20/2010] [Accepted: 10/08/2010] [Indexed: 11/22/2022]
189
Gilchrist DA, Santos GD, Fargo DC, Xie B, Gao Y, Li L, Adelman K. Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation. Cell 2010;143:540-51. [PMID: 21074046 PMCID: PMC2991113 DOI: 10.1016/j.cell.2010.10.004] [Citation(s) in RCA: 337] [Impact Index Per Article: 22.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2010] [Revised: 08/18/2010] [Accepted: 09/27/2010] [Indexed: 11/30/2022]
190
Mohan M, Lin C, Guest E, Shilatifard A. Licensed to elongate: a molecular mechanism for MLL-based leukaemogenesis. Nat Rev Cancer 2010;10:721-8. [PMID: 20844554 DOI: 10.1038/nrc2915] [Citation(s) in RCA: 139] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
191
Perry MW, Boettiger AN, Bothma JP, Levine M. Shadow enhancers foster robustness of Drosophila gastrulation. Curr Biol 2010;20:1562-7. [PMID: 20797865 PMCID: PMC4257487 DOI: 10.1016/j.cub.2010.07.043] [Citation(s) in RCA: 302] [Impact Index Per Article: 20.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2010] [Revised: 07/05/2010] [Accepted: 07/13/2010] [Indexed: 11/28/2022]
192
Porcher A, Abu-Arish A, Huart S, Roelens B, Fradin C, Dostatni N. The time to measure positional information: maternal hunchback is required for the synchrony of the Bicoid transcriptional response at the onset of zygotic transcription. Development 2010;137:2795-804. [PMID: 20663819 DOI: 10.1242/dev.051300] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
193
Blythe SA, Cha SW, Tadjuidje E, Heasman J, Klein PS. beta-Catenin primes organizer gene expression by recruiting a histone H3 arginine 8 methyltransferase, Prmt2. Dev Cell 2010;19:220-31. [PMID: 20708585 PMCID: PMC2923644 DOI: 10.1016/j.devcel.2010.07.007] [Citation(s) in RCA: 130] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2009] [Revised: 03/28/2010] [Accepted: 05/19/2010] [Indexed: 12/31/2022]
194
Frankel N, Davis GK, Vargas D, Wang S, Payre F, Stern DL. Phenotypic robustness conferred by apparently redundant transcriptional enhancers. Nature 2010;466:490-3. [PMID: 20512118 PMCID: PMC2909378 DOI: 10.1038/nature09158] [Citation(s) in RCA: 398] [Impact Index Per Article: 26.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2009] [Accepted: 05/11/2010] [Indexed: 12/02/2022]
195
Gilchrist DA, Adelman K. Moonshine illuminates a developmental role for regulated transcription elongation. Dev Cell 2010;19:9-10. [PMID: 20643345 PMCID: PMC2920456 DOI: 10.1016/j.devcel.2010.07.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
196
Missra A, Gilmour DS. Interactions between DSIF (DRB sensitivity inducing factor), NELF (negative elongation factor), and the Drosophila RNA polymerase II transcription elongation complex. Proc Natl Acad Sci U S A 2010;107:11301-6. [PMID: 20534440 PMCID: PMC2895096 DOI: 10.1073/pnas.1000681107] [Citation(s) in RCA: 134] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
197
Papantonis A, Cook PR. Genome architecture and the role of transcription. Curr Opin Cell Biol 2010;22:271-6. [PMID: 20356724 PMCID: PMC2884177 DOI: 10.1016/j.ceb.2010.03.004] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2009] [Revised: 01/15/2010] [Accepted: 03/03/2010] [Indexed: 02/03/2023]
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Price DH. Regulation of RNA polymerase II elongation by c-Myc. Cell 2010;141:399-400. [PMID: 20434979 DOI: 10.1016/j.cell.2010.04.016] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Inducible gene expression: diverse regulatory mechanisms. Nat Rev Genet 2010;11:426-37. [PMID: 20421872 DOI: 10.1038/nrg2781] [Citation(s) in RCA: 267] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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Vastenhouw NL, Zhang Y, Woods IG, Imam F, Regev A, Liu XS, Rinn J, Schier AF. Chromatin signature of embryonic pluripotency is established during genome activation. Nature 2010;464:922-6. [PMID: 20336069 PMCID: PMC2874748 DOI: 10.1038/nature08866] [Citation(s) in RCA: 294] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2009] [Accepted: 01/27/2010] [Indexed: 12/30/2022]
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