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For: Fridley BL, Serie D, Jenkins G, White K, Bamlet W, Potter JD, Goode EL. Bayesian mixture models for the incorporation of prior knowledge to inform genetic association studies. Genet Epidemiol 2010;34:418-26. [PMID: 20583285 DOI: 10.1002/gepi.20494] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Number Cited by Other Article(s)
1
Di Francia R, Crisci S, De Monaco A, Cafiero C, Re A, Iaccarino G, De Filippi R, Frigeri F, Corazzelli G, Micera A, Pinto A. Response and Toxicity to Cytarabine Therapy in Leukemia and Lymphoma: From Dose Puzzle to Pharmacogenomic Biomarkers. Cancers (Basel) 2021;13:cancers13050966. [PMID: 33669053 PMCID: PMC7956511 DOI: 10.3390/cancers13050966] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Revised: 02/18/2021] [Accepted: 02/19/2021] [Indexed: 01/04/2023]  Open
2
Sun N, Zhao H. Statistical Methods in Genome-Wide Association Studies. Annu Rev Biomed Data Sci 2020. [DOI: 10.1146/annurev-biodatasci-030320-041026] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
3
Leveraging genome characteristics to improve gene discovery for putamen subcortical brain structure. Sci Rep 2017;7:15736. [PMID: 29147026 PMCID: PMC5691156 DOI: 10.1038/s41598-017-15705-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Accepted: 10/31/2017] [Indexed: 12/21/2022]  Open
4
Zhang J, Feng JY, Ni YL, Wen YJ, Niu Y, Tamba CL, Yue C, Song Q, Zhang YM. pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studies. Heredity (Edinb) 2017;118:517-524. [PMID: 28295030 PMCID: PMC5436030 DOI: 10.1038/hdy.2017.8] [Citation(s) in RCA: 117] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2016] [Revised: 01/14/2017] [Accepted: 01/20/2017] [Indexed: 02/06/2023]  Open
5
Li A, Barber RF. Accumulation Tests for FDR Control in Ordered Hypothesis Testing. J Am Stat Assoc 2017. [DOI: 10.1080/01621459.2016.1180989] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
6
Pereira M, Thompson JR, Weichenberger CX, Thomas DC, Minelli C. Inclusion of biological knowledge in a Bayesian shrinkage model for joint estimation of SNP effects. Genet Epidemiol 2017;41:320-331. [PMID: 28393391 DOI: 10.1002/gepi.22038] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Revised: 12/18/2016] [Accepted: 12/26/2016] [Indexed: 01/04/2023]
7
O'Brien KM, Cole SR, Poole C, Bensen JT, Herring AH, Engel LS, Millikan RC. Replication of breast cancer susceptibility loci in whites and African Americans using a Bayesian approach. Am J Epidemiol 2014;179:382-94. [PMID: 24218030 DOI: 10.1093/aje/kwt258] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
8
Carbonetto P, Stephens M. Integrated enrichment analysis of variants and pathways in genome-wide association studies indicates central role for IL-2 signaling genes in type 1 diabetes, and cytokine signaling genes in Crohn's disease. PLoS Genet 2013;9:e1003770. [PMID: 24098138 PMCID: PMC3789883 DOI: 10.1371/journal.pgen.1003770] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2012] [Accepted: 07/22/2013] [Indexed: 12/17/2022]  Open
9
Darnell G, Duong D, Han B, Eskin E. Incorporating prior information into association studies. Bioinformatics 2013;28:i147-53. [PMID: 22689754 PMCID: PMC3371867 DOI: 10.1093/bioinformatics/bts235] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
10
Cancer pharmacogenomics: strategies and challenges. Nat Rev Genet 2012. [PMID: 23183705 DOI: 10.1038/nrg3352] [Citation(s) in RCA: 150] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
11
Zheng G, Yuan A, Jeffries N. Hybrid Bayes factors for genome-wide association studies when a robust test is used. Comput Stat Data Anal 2011. [DOI: 10.1016/j.csda.2011.03.021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
12
Cabras S, Castellanos ME, Biino G, Persico I, Sassu A, Casula L, Del Giacco S, Bertolino F, Pirastu M, Pirastu N. A strategy analysis for genetic association studies with known inbreeding. BMC Genet 2011;12:63. [PMID: 21767363 PMCID: PMC3155486 DOI: 10.1186/1471-2156-12-63] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2011] [Accepted: 07/18/2011] [Indexed: 11/10/2022]  Open
13
Huang H, Chanda P, Alonso A, Bader JS, Arking DE. Gene-based tests of association. PLoS Genet 2011;7:e1002177. [PMID: 21829371 PMCID: PMC3145613 DOI: 10.1371/journal.pgen.1002177] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2010] [Accepted: 05/25/2011] [Indexed: 11/19/2022]  Open
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