1
|
Daems S, Shameer S, Ceusters N, Sweetlove L, Ceusters J. Metabolic modelling identifies mitochondrial Pi uptake and pyruvate efflux as key aspects of daytime metabolism and proton homeostasis in crassulacean acid metabolism leaves. THE NEW PHYTOLOGIST 2024; 244:159-175. [PMID: 39113419 DOI: 10.1111/nph.20032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2024] [Accepted: 07/15/2024] [Indexed: 09/17/2024]
Abstract
Crassulacean acid metabolism (CAM) leaves are characterized by nocturnal acidification and diurnal deacidification processes related with the timed actions of phosphoenolpyruvate carboxylase and Rubisco, respectively. How CAM leaves manage cytosolic proton homeostasis, particularly when facing massive diurnal proton effluxes from the vacuole, remains unclear. A 12-phase flux balance analysis (FBA) model was constructed for a mature malic enzyme-type CAM mesophyll cell in order to predict diel kinetics of intracellular proton fluxes. The charge- and proton-balanced FBA model identified the mitochondrial phosphate carrier (PiC, Pi/H+ symport), which provides Pi to the matrix to sustain ATP biosynthesis, as a major consumer of cytosolic protons during daytime (> 50%). The delivery of Pi to the mitochondrion, co-transported with protons, is required for oxidative phosphorylation and allows sufficient ATP to be synthesized to meet the high energy demand during CAM Phase III. Additionally, the model predicts that mitochondrial pyruvate originating from decarboxylation of malate is exclusively exported to the cytosol, probably via a pyruvate channel mechanism, to fuel gluconeogenesis. In this biochemical cycle, glyceraldehyde 3-phosphate dehydrogenase (GAPDH) acts as another important cytosolic proton consumer. Overall, our findings emphasize the importance of mitochondria in CAM and uncover a hitherto unappreciated role in metabolic proton homeostasis.
Collapse
Affiliation(s)
- Stijn Daems
- Research Group for Sustainable Crop Production & Protection, Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Geel, 2440, Belgium
- KU Leuven Plant Institute (LPI), KU Leuven, Leuven, 3000, Belgium
| | - Sanu Shameer
- Department of Biology, University of Oxford, Oxford, OX1 3RB, UK
- Indian Institute of Science Education and Research, Thiruvananthapuram, Kerala, 695551, India
| | - Nathalie Ceusters
- Research Group for Sustainable Crop Production & Protection, Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Geel, 2440, Belgium
| | - Lee Sweetlove
- Department of Biology, University of Oxford, Oxford, OX1 3RB, UK
| | - Johan Ceusters
- Research Group for Sustainable Crop Production & Protection, Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Geel, 2440, Belgium
- KU Leuven Plant Institute (LPI), KU Leuven, Leuven, 3000, Belgium
- Centre for Environmental Sciences, Environmental Biology, UHasselt, Diepenbeek, 3590, Belgium
| |
Collapse
|
2
|
Borland AM, Barrera Zambrano VA, Ceusters J, Shorrock K. The photosynthetic plasticity of crassulacean acid metabolism: an evolutionary innovation for sustainable productivity in a changing world. THE NEW PHYTOLOGIST 2011; 191:619-633. [PMID: 21679188 DOI: 10.1111/j.1469-8137.2011.03781.x] [Citation(s) in RCA: 71] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
SUMMARY The photosynthetic specialization of crassulacean acid metabolism (CAM) has evolved many times in response to selective pressures imposed by water limitation. Integration of circadian and metabolite control over nocturnal C₄ and daytime C₃ carboxylation processes in CAM plants provides plasticity for optimizing carbon gain and water use by extending or curtailing the period of net CO₂ uptake over any 24-h period. Photosynthetic plasticity underpins the ecological diversity of CAM species and contributes to the potential for high biomass production in water-limited habitats. Perceived evolutionary constraints on the dynamic range of CO₂ acquisition strategies in CAM species can be reconciled with functional anatomical requirements and the metabolic costs of maintaining the enzymatic machinery required for C₃ and C₄ carboxylation processes. Succulence is highlighted as a key trait for maximizing biomass productivity in water-limited habitats by serving to buffer water availability, by maximizing the magnitude of nocturnal CO₂ uptake and by extending the duration of C₄ carboxylation beyond the night period. Examples are discussed where an understanding of the diverse metabolic and ecological manifestations of CAM can be exploited for the sustainable productivity of economically and ecologically important species.
Collapse
Affiliation(s)
- Anne M Borland
- School of Biology, Newcastle University, Newcastle Upon Tyne NE1 7RU, UK
| | | | - Johan Ceusters
- School of Biology, Newcastle University, Newcastle Upon Tyne NE1 7RU, UK
- Department of Biosystems, Division of Crop Biotechnics, Katholieke Universiteit Leuven, Willem De Croylaan 42, B-3001 Heverlee, Belgium
| | - Katherine Shorrock
- School of Biology, Newcastle University, Newcastle Upon Tyne NE1 7RU, UK
| |
Collapse
|
3
|
Garcês H, Sinha N. The 'mother of thousands' (Kalanchoë daigremontiana): a plant model for asexual reproduction and CAM studies. Cold Spring Harb Protoc 2010; 2009:pdb.emo133. [PMID: 20147034 DOI: 10.1101/pdb.emo133] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
The genus Kalanchoë plays an important role in the investigation of biochemical, physiological and phylogenetic aspects of Crassulacean acid metabolism (CAM) in plants, which is an important evolutionary adaptation of the photosynthetic carbon assimilation pathway to arid environments. In addition, natural compounds extracted from tissues of Kalanchoë have potential applicability in treating tumors and inflammatory and allergic diseases, and have been shown to have insecticidal properties. Kalanchoë daigremontiana (Hamet & Perrier) originated in Madagascar and reproduces asexually by spontaneously forming whole plantlets on leaves. Plantlets develop symmetrically along the leaf margins on leaf notches, closely resembling zygotic embryos in development, and once the root system is formed, they detach from the mother-leaf, fall to the ground, and grow into new plants. This phenomenon is also found in other species from this same genus; however, the formation of leaf-plantlets is variable among species. Nevertheless, all species illustrate the remarkable ability of plant somatic cells to regenerate an entire organism, which has fascinated the scientific community for many years. It was only recently that the morphogenic process involved in the origin of K. daigremontiana plantlets was determined using molecular and genetic tools: K. daigremontiana forms plantlets by co-opting both organogenesis and embryogenesis programs into leaves. The ability of K. daigremontiana species to form somatic embryos outside of a seed environment provides an attractive model system to study somatic embryogenesis in nature, particularly the molecular mechanism involved in the acquisition of competence by vegetative cells to make embryos without fertilization.
Collapse
Affiliation(s)
- Helena Garcês
- Department of Plant Biology, University of California, Davis, CA 95616, USA
| | | |
Collapse
|
4
|
Borland AM, Griffiths H, Hartwell J, Smith JAC. Exploiting the potential of plants with crassulacean acid metabolism for bioenergy production on marginal lands. JOURNAL OF EXPERIMENTAL BOTANY 2009; 60:2879-96. [PMID: 19395392 DOI: 10.1093/jxb/erp118] [Citation(s) in RCA: 156] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Crassulacean acid metabolism (CAM) is a photosynthetic adaptation that facilitates the uptake of CO(2) at night and thereby optimizes the water-use efficiency of carbon assimilation in plants growing in arid habitats. A number of CAM species have been exploited agronomically in marginal habitats, displaying annual above-ground productivities comparable with those of the most water-use efficient C(3) or C(4) crops but with only 20% of the water required for cultivation. Such attributes highlight the potential of CAM plants for carbon sequestration and as feed stocks for bioenergy production on marginal and degraded lands. This review highlights the metabolic and morphological features of CAM that contribute towards high biomass production in water-limited environments. The temporal separation of carboxylation processes that underpins CAM provides flexibility for modulating carbon gain over the day and night, and poses fundamental questions in terms of circadian control of metabolism, growth, and productivity. The advantages conferred by a high water-storage capacitance, which translate into an ability to buffer fluctuations in environmental water availability, must be traded against diffusive (stomatal plus internal) constraints imposed by succulent CAM tissues on CO(2) supply to the cellular sites of carbon assimilation. The practicalities for maximizing CAM biomass and carbon sequestration need to be informed by underlying molecular, physiological, and ecological processes. Recent progress in developing genetic models for CAM are outlined and discussed in light of the need to achieve a systems-level understanding that spans the molecular controls over the pathway through to the agronomic performance of CAM and provision of ecosystem services on marginal lands.
Collapse
Affiliation(s)
- Anne M Borland
- Institute for Research on the Environment and Sustainability, Newcastle University, Newcastle Upon Tyne NE1 7RU, UK.
| | | | | | | |
Collapse
|
5
|
Cushman JC, Borland AM. Induction of Crassulacean acid metabolism by water limitation. PLANT, CELL & ENVIRONMENT 2002; 25:295-310. [PMID: 11841671 DOI: 10.1046/j.0016-8025.2001.00760.x] [Citation(s) in RCA: 62] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Crassulacean acid metabolism (CAM), a key adaptation of photosynthetic carbon fixation to limited water availability, is characterized by nocturnal CO2 fixation and daytime CO2 re-assimilation, which generally results in improved water-use efficiency. However, CAM plants display a remarkable degree of photosynthetic plasticity within a continuum of diel gas exchange patterns. Genotypic, ontogenetic and environmental factors combine to govern the extent to which CAM is expressed. The ecological diversity of CAM is mirrored by plasticity in a range of biochemical and physiological attributes. In C3/CAM-intermediate plants, limited water availability can induce or enhance the expression of CAM. CAM induction is controlled by a combination of transcriptional, post-transcriptional and post-translational regulatory events. Early events in CAM induction point to a requirement for calcium and calcium-dependent protein kinase activities. Gene discovery efforts, improved transformation technologies and genetic models for CAM plants, coupled with detailed physiological investigations, will lead to new insights into the molecular genetic basis of induction processes and the circadian oscillator that governs carbon flux during CAM. Future integration of genomic, biochemical and physiological approaches in selected CAM models promise to provide a detailed view of the complex regulatory dynamics involved in CAM induction and modulation by water deficit. Such information is expected to have broad significance as the ecological and agricultural importance of CAM species increases in the face of global warming trends and the associated expansion of desertification in semi-arid regions around the world.
Collapse
Affiliation(s)
- J. C. Cushman
- Department of Biochemistry/MS200, University of Nevada, Reno, NV 89557-0014, USA and Department of Agricultural and Environmental Science, University of Newcastle, Newcastle upon Tyne, NE1 7RU, UK
| | | |
Collapse
|
6
|
Cushman JC. Crassulacean acid metabolism. A plastic photosynthetic adaptation to arid environments. PLANT PHYSIOLOGY 2001; 127:1439-1448. [PMID: 11743087 DOI: 10.1104/pp.010818] [Citation(s) in RCA: 97] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Affiliation(s)
- J C Cushman
- Department of Biochemistry, University of Nevada, Reno, Nevada 89557-0014, USA.
| |
Collapse
|
7
|
Ratajczak R. Structure, function and regulation of the plant vacuolar H(+)-translocating ATPase. BIOCHIMICA ET BIOPHYSICA ACTA 2000; 1465:17-36. [PMID: 10748245 DOI: 10.1016/s0005-2736(00)00129-2] [Citation(s) in RCA: 169] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The plant V-ATPase is a primary-active proton pump present at various components of the endomembrane system. It is assembled by different protein subunits which are located in two major domains, the membrane-integral V(o)-domain and the membrane peripheral V(1)-domain. At the plant vacuole the V-ATPase is responsible for energization of transport of ions and metabolites, and thus the V-ATPase is important as a 'house-keeping' and as a stress response enzyme. It has been shown that transcript and protein amount of the V-ATPase are regulated depending on metabolic conditions indicating that the expression of V-ATPase subunit is highly regulated. Moreover, there is increasing evidence that modulation of the holoenzyme structure might influence V-ATPase activity.
Collapse
Affiliation(s)
- R Ratajczak
- Darmstadt University of Technology, Institute of Botany, Schnittspahnstrasse 3-5, D-64287, Darmstadt, Germany.
| |
Collapse
|
8
|
Abstract
▪ Abstract Crassulacean acid metabolism (CAM) is an adaptation of photosynthesis to limited availability of water or CO2. CAM is characterized by nocturnal CO2 fixation via the cytosolic enzyme PEP carboxylase (PEPC), formation of PEP by glycolysis, malic acid accumulation in the vacuole, daytime decarboxylation of malate and CO2 re-assimilation via ribulose-1,5-bisphosphate carboxylase (RUBISCO), and regeneration of storage carbohydrates from pyruvate and/or PEP by gluconeogenesis. Within this basic framework, the pathway exhibits an extraordinary range of metabolic plasticity governed by environmental, developmental, tissue-specific, hormonal, and circadian cues. Characterization of genes encoding key CAM enzymes has shown that a combination of transcriptional, posttranscriptional, translational, and posttranslational regulatory events govern the expression of the pathway. Recently, this information has improved our ability to dissect the regulatory and signaling events that mediate the expression and operation of the pathway. Molecular analysis and sequence information have also provided new ways of assessing the evolutionary origins of CAM. Genetic and physiological analysis of transgenic plants currently under development will improve our further understanding of the molecular genetics of CAM.
Collapse
Affiliation(s)
- John C. Cushman
- Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, Oklahoma 74078-0454; e-mail: , Department of Biochemistry, The University of Arizona, Tucson, Arizona 85721-0088; e-mail:
| | | |
Collapse
|
9
|
Fischer-Schliebs E, Ball E, Berndt E, Besemfelder-Butz E, Binzel ML, Drobny M, Mühlenhoff D, Müller ML, Rakowski K, Ratajczak R. Differential immunological cross-reactions with antisera against the V-ATPase of Kalanchoë daigremontiana reveal structural differences of V-ATPase subunits of different plant species. Biol Chem 1997; 378:1131-9. [PMID: 9372182 DOI: 10.1515/bchm.1997.378.10.1131] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Two antisera (ATP88 and ATP95) raised against the V-ATPase holoenzyme of Kalanchoë daigremontiana were tested for their cross-reactivity with subunits of V-ATPases from other plant species. V-ATPases from Kalanchoë blossfeldiana, Mesembryanthemum crystallinum, Nicotiana tabacum, Lycopersicon esculentum, Citrus limon, Lemna gibba, Hordeum vulgare and Zea mays were immunoprecipitated with an antiserum against the catalytic V-ATPase subunit A of M. crystallinum. As shown by silver staining and Western blot analysis with ATP88, subunits A, B, C, D and c were present in all immunoprecipitated V-ATPases. In contrast, ATP95 recognized the whole set of subunits only in K. blossfeldiana, M. crystallinum, H. vulgare and Z. mays. This differential cross reactivity of ATP95 indicates the presence of structural differences of certain V-ATPase subunits. Based on the Bafilomycin A1-sensitive ATPase activity of tonoplast enriched vesicles, and on the amount of V-ATPase solubilized and immunoprecipitated, the specific ATP-hydrolysis activity of the V-ATPases under test was determined. The structural differences correlate with the ability of V-ATPases from different species to hydrolyze ATP at one given assay condition for ATP-hydrolysis measurements. Interestingly V-ATPases showing cross-reactivity of subunits A, B, C, D and c with ATP95 showed higher rates of specific ATP hydrolysis compared to V-ATPases containing subunits which were not labeled by ATP95. Thus, V-ATPases with high turnover rates in our assay conditions may show common structural characteristics which separate them from ATPases with low turnover rates.
Collapse
|