• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (5071034)   Today's Articles (71)
For: Sanseverino J, Werner C, Fleming J, Applegate B, King JM, Sayler GS. Molecular diagnostics of polycyclic aromatic hydrocarbon biodegradation in manufactured gas plant soils. Biodegradation 1994;4:303-21. [PMID: 7516749 DOI: 10.1007/bf00695976] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Number Cited by Other Article(s)
1
Davin M, Colinet G, Fauconnier ML. Targeting the right parameters in PAH remediation studies. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021;278:116857. [PMID: 33711627 DOI: 10.1016/j.envpol.2021.116857] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2020] [Revised: 02/17/2021] [Accepted: 02/28/2021] [Indexed: 06/12/2023]
2
Bozorg A, Gates ID, Sen A. Real time monitoring of biofilm development under flow conditions in porous media. BIOFOULING 2012;28:937-951. [PMID: 22963147 DOI: 10.1080/08927014.2012.723204] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
3
Draft genome sequence of the polycyclic aromatic hydrocarbon-degrading, genetically engineered bioluminescent bioreporter Pseudomonas fluorescens HK44. J Bacteriol 2011;193:5009-10. [PMID: 21742869 DOI: 10.1128/jb.05530-11] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
4
Afzal M, Yousaf S, Reichenauer TG, Kuffner M, Sessitsch A. Soil type affects plant colonization, activity and catabolic gene expression of inoculated bacterial strains during phytoremediation of diesel. JOURNAL OF HAZARDOUS MATERIALS 2011;186:1568-75. [PMID: 21216097 DOI: 10.1016/j.jhazmat.2010.12.040] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2010] [Accepted: 12/09/2010] [Indexed: 05/06/2023]
5
van der Meer JR. Bacterial Sensors: Synthetic Design and Application Principles. ACTA ACUST UNITED AC 2010. [DOI: 10.2200/s00312ed1v01y201011sbi002] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
6
Lipthay JR, Aamand J, Barkay T. Expression of tfdA genes in aquatic microbial communities during acclimation to 2,4-dichlorophenoxyacetic acid. FEMS Microbiol Ecol 2009;40:205-14. [PMID: 19709228 DOI: 10.1111/j.1574-6941.2002.tb00953.x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]  Open
7
Diversity, abundance, and consistency of microbial oxygenase expression and biodegradation in a shallow contaminated aquifer. Appl Environ Microbiol 2009;75:6478-87. [PMID: 19700556 DOI: 10.1128/aem.01091-09] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
8
Bordenave S, Goñi-Urriza M, Vilette C, Blanchard S, Caumette P, Duran R. Diversity of ring-hydroxylating dioxygenases in pristine and oil contaminated microbial mats at genomic and transcriptomic levels. Environ Microbiol 2008;10:3201-11. [PMID: 18662307 DOI: 10.1111/j.1462-2920.2008.01707.x] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
9
Jørgensen KS. Advances in monitoring of catabolic genes during bioremediation. Indian J Microbiol 2008;48:152-5. [PMID: 23100709 DOI: 10.1007/s12088-008-0021-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2008] [Accepted: 03/27/2008] [Indexed: 11/26/2022]  Open
10
Piskonen R, Nyyssönen M, Itävaara M. Evaluating the biodegradation of aromatic hydrocarbons by monitoring of several functional genes. Biodegradation 2008;19:883-95. [PMID: 18425625 DOI: 10.1007/s10532-008-9190-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2007] [Accepted: 04/01/2008] [Indexed: 10/22/2022]
11
Baldwin BR, Nakatsu CH, Nies L. Enumeration of aromatic oxygenase genes to evaluate monitored natural attenuation at gasoline-contaminated sites. WATER RESEARCH 2008;42:723-31. [PMID: 17707876 DOI: 10.1016/j.watres.2007.07.052] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2007] [Revised: 07/25/2007] [Accepted: 07/31/2007] [Indexed: 05/16/2023]
12
Recent Advances in Functional Genomics and Proteomics of Plant Associated Microbes. SOIL BIOLOGY 2008. [DOI: 10.1007/978-3-540-75575-3_9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
13
Ferguson AS, Huang WE, Lawson KA, Doherty R, Gibert O, Dickson KW, Whiteley AS, Kulakov LA, Thompson IP, Kalin RM, Larkin MJ. Microbial analysis of soil and groundwater from a gasworks site and comparison with a sequenced biological reactive barrier remediation process. J Appl Microbiol 2007;102:1227-38. [PMID: 17448158 DOI: 10.1111/j.1365-2672.2007.03398.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
14
Jørgensen KS. In Situ Bioremediation. ADVANCES IN APPLIED MICROBIOLOGY 2007;61:285-305. [PMID: 17448793 DOI: 10.1016/s0065-2164(06)61008-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
15
Cunliffe M, Kawasaki A, Fellows E, Kertesz MA. Effect of inoculum pretreatment on survival, activity and catabolic gene expression of Sphingobium yanoikuyae B1 in an aged polycyclic aromatic hydrocarbon-contaminated soil. FEMS Microbiol Ecol 2006;58:364-72. [PMID: 17117981 DOI: 10.1111/j.1574-6941.2006.00167.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]  Open
16
Tuomi PM, Salminen JM, Jørgensen KS. The abundance of nahAc genes correlates with the 14C-naphthalene mineralization potential in petroleum hydrocarbon-contaminated oxic soil layers. FEMS Microbiol Ecol 2005;51:99-107. [PMID: 16329859 DOI: 10.1016/j.femsec.2004.07.011] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2003] [Revised: 05/11/2004] [Accepted: 07/20/2004] [Indexed: 11/26/2022]  Open
17
Ahn Y, Jung H, Tatavarty R, Choi H, Yang JW, Kim IS. Monitoring of petroleum hydrocarbon degradative potential of indigenous microorganisms in ozonated soil. Biodegradation 2005;16:45-56. [PMID: 15727154 DOI: 10.1007/s10531-004-0428-2] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
18
Piskonen R, Nyyssönen M, Rajamäki T, Itävaara M. Monitoring of accelerated naphthalene-biodegradation in a bioaugmented soil slurry. Biodegradation 2005;16:127-34. [PMID: 15730023 DOI: 10.1007/s10532-004-4893-9] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
19
Holmes DE, Nevin KP, Lovley DR. In situ expression of nifD in Geobacteraceae in subsurface sediments. Appl Environ Microbiol 2005;70:7251-9. [PMID: 15574924 PMCID: PMC535187 DOI: 10.1128/aem.70.12.7251-7259.2004] [Citation(s) in RCA: 97] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
20
Dorn JG, Mahal MK, Brusseau ML, Maier RM. Employing a novel fiber optic detection system to monitor the dynamics of in situ lux bioreporter activity in porous media: system performance update. Anal Chim Acta 2004. [DOI: 10.1016/j.aca.2004.07.060] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
21
Dionisi HM, Chewning CS, Morgan KH, Menn FM, Easter JP, Sayler GS. Abundance of dioxygenase genes similar to Ralstonia sp. strain U2 nagAc is correlated with naphthalene concentrations in coal tar-contaminated freshwater sediments. Appl Environ Microbiol 2004;70:3988-95. [PMID: 15240274 PMCID: PMC444821 DOI: 10.1128/aem.70.7.3988-3995.2004] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
22
Burns R, Stach J. Microbial ecology of soil biofilms: Substrate bioavailability, bioremediation and complexity. ACTA ACUST UNITED AC 2002. [DOI: 10.1016/s0166-2481(02)80006-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
23
Milcic-Terzic J, Lopez-Vidal Y, Vrvic MM, Saval S. Detection of catabolic genes in indigenous microbial consortia isolated from a diesel-contaminated soil. BIORESOURCE TECHNOLOGY 2001;78:47-54. [PMID: 11265787 DOI: 10.1016/s0960-8524(00)00156-5] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
24
Leblond JD, Schultz TW, Sayler GS. Observations on the preferential biodegradation of selected components of polyaromatic hydrocarbon mixtures. CHEMOSPHERE 2001;42:333-343. [PMID: 11100783 DOI: 10.1016/s0045-6535(00)00161-2] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
25
Laurie AD, Lloyd-Jones G. Quantification of phnAc and nahAc in contaminated new zealand soils by competitive PCR. Appl Environ Microbiol 2000;66:1814-7. [PMID: 10788344 PMCID: PMC101417 DOI: 10.1128/aem.66.5.1814-1817.2000] [Citation(s) in RCA: 87] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
26
Lloyd-Jones G, Laurie AD, Hunter DW, Fraser R. Analysis of catabolic genes for naphthalene and phenanthrene degradation in contaminated New Zealand soils. FEMS Microbiol Ecol 1999. [DOI: 10.1111/j.1574-6941.1999.tb00599.x] [Citation(s) in RCA: 80] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]  Open
27
Wilson MS, Bakermans C, Madsen EL. In situ, real-time catabolic gene expression: extraction and characterization of naphthalene dioxygenase mRNA transcripts from groundwater. Appl Environ Microbiol 1999;65:80-7. [PMID: 9872763 PMCID: PMC90986 DOI: 10.1128/aem.65.1.80-87.1999] [Citation(s) in RCA: 120] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
28
Hedlund BP, Geiselbrecht AD, Bair TJ, Staley JT. Polycyclic aromatic hydrocarbon degradation by a new marine bacterium, Neptunomonas naphthovorans gen. nov., sp. nov. Appl Environ Microbiol 1999;65:251-9. [PMID: 9872786 PMCID: PMC91009 DOI: 10.1128/aem.65.1.251-259.1999] [Citation(s) in RCA: 146] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/1998] [Accepted: 10/19/1998] [Indexed: 11/20/2022]  Open
29
Biodegradation of aromatic hydrocarbons in an extremely acidic environment. Appl Environ Microbiol 1998;64:4180-4. [PMID: 9797263 PMCID: PMC106625 DOI: 10.1128/aem.64.11.4180-4184.1998] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
30
Langworthy DE, Stapleton RD, Sayler GS, Findlay RH. Genotypic and phenotypic responses of a riverine microbial community to polycyclic aromatic hydrocarbon contamination. Appl Environ Microbiol 1998;64:3422-8. [PMID: 9726892 PMCID: PMC106742 DOI: 10.1128/aem.64.9.3422-3428.1998] [Citation(s) in RCA: 82] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
31
Stapleton RD, Ripp S, Jimenez L, Cheol-Koh S, Fleming JT, Gregory IR, Sayler GS. Nucleic acid analytical approaches in bioremediation: site assessment and characterization. J Microbiol Methods 1998. [DOI: 10.1016/s0167-7012(98)00021-9] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
32
Dagher F, Déziel E, Lirette P, Paquette G, Bisaillon JG, Villemur R. Comparative study of five polycyclic aromatic hydrocarbon degrading bacterial strains isolated from contaminated soils. Can J Microbiol 1997;43:368-77. [PMID: 9115093 DOI: 10.1139/m97-051] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
33
Kehrmeyer S, Applegate B, Pinkart H, Hedrick D, White D, Sayler G. Combined lipid/DNA extraction method for environmental samples. J Microbiol Methods 1996. [DOI: 10.1016/0167-7012(95)00094-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
34
Goyal AK, Zylstra GJ. Molecular cloning of novel genes for polycyclic aromatic hydrocarbon degradation from Comamonas testosteroni GZ39. Appl Environ Microbiol 1996;62:230-6. [PMID: 8572701 PMCID: PMC167791 DOI: 10.1128/aem.62.1.230-236.1996] [Citation(s) in RCA: 107] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]  Open
35
Johnson GR, Olsen RH. Nucleotide sequence analysis of genes encoding a toluene/benzene-2-monooxygenase from Pseudomonas sp. strain JS150. Appl Environ Microbiol 1995;61:3336-46. [PMID: 7574644 PMCID: PMC167614 DOI: 10.1128/aem.61.9.3336-3346.1995] [Citation(s) in RCA: 64] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]  Open
36
Sayler GS, Layton A, Lajoie C, Bowman J, Tschantz M, Fleming JT. Molecular site assessment and process monitoring in bioremediation and natural attenuation. off. Appl Biochem Biotechnol 1995;54:277-90. [PMID: 7486982 DOI: 10.1007/bf02787926] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
37
Layton AC, Lajoie CA, Easter JP, Jernigan R, Sanseverino J, Sayler GS. Molecular diagnostics and chemical analysis for assessing biodegradation of polychlorinated biphenyls in contaminated soils. JOURNAL OF INDUSTRIAL MICROBIOLOGY 1994;13:392-401. [PMID: 7765670 DOI: 10.1007/bf01577225] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
PrevPage 1 of 1 1Next
© 2004-2025 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA