1
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Zhang K, Foster L, Buchanan D, Coker VS, Pittman JK, Lloyd JR. The interplay between Cs and K in Pseudanabaena catenata; from microbial bloom control strategies to bioremediation options for radioactive waters. JOURNAL OF HAZARDOUS MATERIALS 2023; 445:130556. [PMID: 37055967 DOI: 10.1016/j.jhazmat.2022.130556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 11/24/2022] [Accepted: 12/03/2022] [Indexed: 06/19/2023]
Abstract
Pseudanabaena dominates cyanobacterial blooms in the First-Generation Magnox Storage Pond (FGMSP) at a UK nuclear site. The fission product Cs is a radiologically significant radionuclide in the pond, and understanding the interactions between Cs and Pseudanabaena spp. is therefore important for determining facility management strategies, as well as improving understanding of microbiological responses to this non-essential chemical analogue of K. This study evaluated the fate of Cs following interactions with Pseudanabaena catenata, a laboratory strain most closely related to that dominating FGMSP blooms. Experiments showed that Cs (1 mM) exposure did not affect the growth of P. catenata, while a high concentration of K (5 mM) caused a significant reduction in cell yield. Scanning transmission X-ray microscopy elemental mapping identified Cs accumulation to discrete cytoplasmic locations within P. catenata cells, indicating a potential bioremediation option for Cs. Proteins related to stress responses and nutrient limitation (K, P) were stimulated by Cs treatment. Furthermore, selected K+ transport proteins were mis-regulated by Cs dosing, which indicates the importance of the K+ transport system for Cs accumulation. These findings enhance understanding of Cs fate and biological responses within Pseudanabaena blooms, and indicate that K exposure might provide a microbial bloom control strategy.
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Affiliation(s)
- Kejing Zhang
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, Research Centre for Radwaste Disposal and Williamson Research Centre for Molecular Environmental Science, The University of Manchester, Oxford Road, Manchester M13 9PL, UK.
| | - Lynn Foster
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, Research Centre for Radwaste Disposal and Williamson Research Centre for Molecular Environmental Science, The University of Manchester, Oxford Road, Manchester M13 9PL, UK
| | - Dawn Buchanan
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, Research Centre for Radwaste Disposal and Williamson Research Centre for Molecular Environmental Science, The University of Manchester, Oxford Road, Manchester M13 9PL, UK
| | - Victoria S Coker
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, Research Centre for Radwaste Disposal and Williamson Research Centre for Molecular Environmental Science, The University of Manchester, Oxford Road, Manchester M13 9PL, UK
| | - Jon K Pittman
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, Research Centre for Radwaste Disposal and Williamson Research Centre for Molecular Environmental Science, The University of Manchester, Oxford Road, Manchester M13 9PL, UK
| | - Jonathan R Lloyd
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, Research Centre for Radwaste Disposal and Williamson Research Centre for Molecular Environmental Science, The University of Manchester, Oxford Road, Manchester M13 9PL, UK.
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2
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Abstract
Environmental disasters offer the unique opportunity for landscape-scale ecological and evolutionary studies that are not possible in the laboratory or small experimental plots. The nuclear accident at Chernobyl (1986) allows for rigorous analyses of radiation effects on individuals and populations at an ecosystem scale. Here, the current state of knowledge related to populations within the Chernobyl region of Ukraine and Belarus following the largest civil nuclear accident in history is reviewed. There is now a significant literature that provides contrasting and occasionally conflicting views of the state of animals and how they are affected by this mutagenic stressor. Studies of genetic and physiological effects have largely suggested significant injuries to individuals inhabiting the more radioactive areas of the Chernobyl region. Most population censuses for most species suggest that abundances are reduced in the more radioactive areas.
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Affiliation(s)
- Timothy A. Mousseau
- Department of Biological Sciences, University of South Carolina, Columbia, South Carolina 29208, USA
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3
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Boratyński Z, Mousseau TA, Møller AP. Individual quality and phenology mediate the effect of radioactive contamination on body temperature in Chernobyl barn swallows. Ecol Evol 2021; 11:9039-9048. [PMID: 34257943 PMCID: PMC8258232 DOI: 10.1002/ece3.7742] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Revised: 05/14/2021] [Accepted: 05/18/2021] [Indexed: 12/29/2022] Open
Abstract
Anthropogenic stressors, such as radioactive contaminants released from the Chernobyl and Fukushima Daiichi accidents, deteriorate ecological and evolutionary processes, as evidence for damaging effects of radioactive contamination on wildlife is accumulating. Yet little is known about physiological traits of animals inhabiting contaminated areas, and how those are affected by individual quality and phenology. We investigated variation in body temperature of wild barn swallows, Hirundo rustica, exposed to radioactive contamination from the Chernobyl accident in Ukraine and Belarus. We tested whether exposure to variable levels of radioactive contamination modified core body temperature of birds, and whether individual and phenological characteristics modulated radiosensitivity of body temperature. We showed that barn swallow body temperature varied with exposure to environmental radioactive contamination and that individual characteristics and phenology affected radioactive exposure. Increased radiosensitivity and up-regulation of body temperature were detected in birds of low body condition, high risk of capture, and in animals captured late during the day but early during the season. These results highlight the complex ways that the body temperature of a wild bird is impacted by exposure to increased radioactive contamination in natural habitats. By impacting body temperature, increased radioactive contamination may compromise energetic balance, jeopardize responsiveness to global warming, and increase risk of overheating.
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Affiliation(s)
- Zbyszek Boratyński
- CIBIO/InBioResearch Centre in Biodiversity and Genetic ResourcesUniversity of PortoPortoPortugal
| | - Timothy A. Mousseau
- Department of Biological SciencesUniversity of South CarolinaColumbiaSCUSA
- SURA/LASSO/NASAISS Utilization and Life Sciences DivisionKennedy Space CenterCape CanaveralFLUSA
| | - Anders Pape Møller
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological EngineeringCollege of Life SciencesBeijing Normal UniversityBeijingChina
- Ecologie Systematique EvolutionCNRSAgroParisTechUniversite Paris‐SaclayOrsayFrance
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4
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Lavrinienko A, Hämäläinen A, Hindström R, Tukalenko E, Boratyński Z, Kivisaari K, Mousseau TA, Watts PC, Mappes T. Comparable response of wild rodent gut microbiome to anthropogenic habitat contamination. Mol Ecol 2021; 30:3485-3499. [PMID: 33955637 DOI: 10.1111/mec.15945] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2020] [Revised: 04/07/2021] [Accepted: 04/29/2021] [Indexed: 12/11/2022]
Abstract
Species identity is thought to dominate over environment in shaping wild rodent gut microbiota, but it remains unknown whether the responses of host gut microbiota to shared anthropogenic habitat impacts are species-specific or if the general gut microbiota response is similar across host species. Here, we compare the influence of exposure to radionuclide contamination on the gut microbiota of four wild mouse species: Apodemus flavicollis, A. sylvaticus, A. speciosus and A. argenteus. Building on the evidence that radiation impacts bank vole (Myodes glareolus) gut microbiota, we hypothesized that radiation exposure has a general impact on rodent gut microbiota. Because we sampled (n = 288) two species pairs of Apodemus mice that occur in sympatry in habitats affected by the Chernobyl and Fukushima nuclear accidents, these comparisons provide an opportunity for a general assessment of the effects of exposure to environmental contamination (radionuclides) on gut microbiota across host phylogeny and geographical areas. In general agreement with our hypothesis, analyses of bacterial 16S rRNA gene sequences revealed that radiation exposure alters the gut microbiota composition and structure in three of the four species of Apodemus mice. The notable lack of an association between the gut microbiota and soil radionuclide contamination in one mouse species from Fukushima (A. argenteus) probably reflects host "radiation escape" through its unique tree-dwelling lifestyle. The finding that host ecology can modulate effects of radiation exposure offers an interesting counterpoint for future analyses into effects of radiation or any other toxic exposure on host and its associated microbiota. Our data show that exposure to radionuclide contamination is linked to comparable gut microbiota responses across multiple species of rodents.
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Affiliation(s)
- Anton Lavrinienko
- Ecology and Genetics, University of Oulu, Oulu, Finland.,Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
| | - Anni Hämäläinen
- Ecology and Genetics, University of Oulu, Oulu, Finland.,Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland.,Institute of Environmental Sciences, Jagiellonian University, Kraków, Poland
| | | | - Eugene Tukalenko
- Ecology and Genetics, University of Oulu, Oulu, Finland.,National Research Center for Radiation Medicine of the National Academy of Medical Science, Kyiv, Ukraine
| | - Zbyszek Boratyński
- CIBIO-InBIO Associate Laboratory, Research Center in Biodiversity and Genetic Resources, University of Porto, Vairão, Portugal
| | - Kati Kivisaari
- Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
| | - Timothy A Mousseau
- Department of Biological Sciences, University of South Carolina, Columbia, SC, USA.,SURA/LASSO/NASA, ISS Utilization and Life Sciences Division, Kennedy Space Center, Cape Canaveral, FL, USA
| | - Phillip C Watts
- Ecology and Genetics, University of Oulu, Oulu, Finland.,Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
| | - Tapio Mappes
- Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
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5
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Labrador MDM, Doña J, Serrano D, Jovani R. Quantitative Interspecific Approach to the Stylosphere: Patterns of Bacteria and Fungi Abundance on Passerine Bird Feathers. MICROBIAL ECOLOGY 2021; 81:1088-1097. [PMID: 33225409 DOI: 10.1007/s00248-020-01634-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Accepted: 10/27/2020] [Indexed: 06/11/2023]
Abstract
Feathers are the habitat of a myriad of organisms, from fungi and bacteria to lice and mites. Although most studies focus on specific taxa and their interaction with the bird host, anecdotal data glimpse feathers as holders of a system with its own ecology, what we call here the stylosphere. A major gap in our knowledge of the stylosphere is the ecology of the total abundance of microorganisms, being also rare to find studies that analyze abundance of more than one group of microorganisms at the bird interspecific level. Here, we quantified bacterial and fungi abundances through qPCR on the wing feathers of 144 birds from 24 passerine and one non-passerine bird species from three localities in Southern Spain. Bacteria and fungi abundances spanned three orders of magnitude among individual birds, but were consistent when comparing the right and the left wing feathers of individuals. Sampling locality explained ca. 14% of the variation in both bacteria and fungi abundances. Even when statistically controlling for sampling locality, microbial abundances consistently differed between birds from different species, but these differences were not explained by bird phylogeny. Finally, bird individuals and species having more bacteria also tended to held larger abundances of fungi. Our results suggest a quite complex explanation for stylosphere microorganisms' abundance, being shaped by bird individual and species traits, as well as environmental factors, and likely bacteria-fungi interactions.
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Affiliation(s)
- María Del Mar Labrador
- Department of Evolutionary Ecology, Estación Biológica de Doñana (EBD-CSIC), Avda. Américo Vespucio s/n, 41092, Seville, Spain.
| | - Jorge Doña
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, 1816 S. Oak St., Champaign, IL, 61820, USA
- Department of Animal Biology, Universidad de Granada, 18001, Granada, Spain
| | - David Serrano
- Department of Conservation Biology, Estación Biológica de Doñana (EBD-CSIC), Avda. Américo Vespucio s/n, 41092, Seville, Spain
| | - Roger Jovani
- Department of Evolutionary Ecology, Estación Biológica de Doñana (EBD-CSIC), Avda. Américo Vespucio s/n, 41092, Seville, Spain
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6
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Antwis RE, Beresford NA, Jackson JA, Fawkes R, Barnett CL, Potter E, Walker L, Gaschak S, Wood MD. Impacts of radiation exposure on the bacterial and fungal microbiome of small mammals in the Chernobyl Exclusion Zone. J Anim Ecol 2021; 90:2172-2187. [PMID: 33901301 DOI: 10.1111/1365-2656.13507] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2020] [Accepted: 04/11/2021] [Indexed: 12/19/2022]
Abstract
Environmental impacts of the 1986 Chernobyl Nuclear Power Plant accident are much debated, but the effects of radiation on host microbiomes have received little attention to date. We present the first analysis of small mammal gut microbiomes from the Chernobyl Exclusion Zone in relation to total absorbed dose rate, including both caecum and faeces samples. We provide novel evidence that host species determines fungal community composition, and that associations between microbiome (both bacterial and fungal) communities and radiation exposure vary between host species. Using ambient versus total weighted absorbed dose rates in analyses produced different results, with the latter more robust for interpreting microbiome changes at the individual level. We found considerable variation between results for faecal and gut samples of bank voles, suggesting faecal samples are not an accurate indicator of gut composition. Associations between radiation exposure and microbiome composition of gut samples were not robust against geographical variation, although we identified families of bacteria (Lachnospiraceae and Muribaculaceae) and fungi (Steccherinaceae and Strophariaceae) in the guts of bank voles that may serve as biomarkers of radiation exposure. Further studies considering a range of small mammal species are needed to establish the robustness of these potential biomarkers.
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Affiliation(s)
- Rachael E Antwis
- School of Science, Engineering and Environment, University of Salford, Salford, UK
| | - Nicholas A Beresford
- School of Science, Engineering and Environment, University of Salford, Salford, UK.,UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Bailrigg, UK
| | - Joseph A Jackson
- School of Science, Engineering and Environment, University of Salford, Salford, UK
| | - Ross Fawkes
- School of Science, Engineering and Environment, University of Salford, Salford, UK
| | - Catherine L Barnett
- UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Bailrigg, UK
| | - Elaine Potter
- UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Bailrigg, UK
| | - Lee Walker
- UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Bailrigg, UK
| | - Sergey Gaschak
- Chornobyl Center for Nuclear Safety, Radioactive Waste and Radioecology, International Radioecology Laboratory, Slavutych, Ukraine
| | - Michael D Wood
- School of Science, Engineering and Environment, University of Salford, Salford, UK
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7
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Yang X, Xu X, Hu D. Succession mechanism of microbial community with high species diversity in nutrient-deficient environments with low-dose ionizing radiation. Ecol Modell 2020. [DOI: 10.1016/j.ecolmodel.2020.109270] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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8
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Alt G, Mägi M, Lodjak J, Mänd R. Experimental study of the effect of preen oil against feather bacteria in passerine birds. Oecologia 2020; 192:723-733. [DOI: 10.1007/s00442-020-04599-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Accepted: 01/10/2020] [Indexed: 02/02/2023]
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9
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Real A, Garnier-Laplace J. The importance of deriving adequate wildlife benchmark values to optimize radiological protection in various environmental exposure situations. JOURNAL OF ENVIRONMENTAL RADIOACTIVITY 2020; 211:105902. [PMID: 30732942 DOI: 10.1016/j.jenvrad.2019.01.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Revised: 01/09/2019] [Accepted: 01/25/2019] [Indexed: 06/09/2023]
Abstract
The actions to be taken to demonstrate that the environment is adequately protected against the detrimental effects of ionising radiation, and if needed to protect it, must be commensurate with the overall level of risk to non-human biota. To judge the level of risk, the estimated dose rates absorbed by animals and plants need to be compared with dose criteria, a benchmark or reference value. A variety of aspects will influence the final value of the derived benchmark, including: the aim of the application of the benchmark, the protection goals of the assessment, the data on radiation-induced biological effects considered, and the methodology used. Benchmark values have been proposed by several international organizations (UNSCEAR, ICRP, IAEA), countries (USA, Canada) and research projects (ERICA, PROTECT), for different application purposes and protection goals and using a variety of methodologies. This paper describes the aspects that need to be considered in the derivation of numerical benchmarks, the approaches used by different organizations and the benchmark values they have proposed for the radiation protection of the environment. The benchmark values proposed are compared with the dose-rates at which radiation-induced biological effects have been described in animals and plants.
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Affiliation(s)
- Almudena Real
- Spanish Research Centre in Energy, Environment and Technology (CIEMAT), Avenida Complutense 40, Madrid, 28040, Spain.
| | - Jacqueline Garnier-Laplace
- Institut de Radioprotection et de Sûreté Nucléaire (IRSN), Pôle Santé et Environnement, Cadarache-Batiment 159, BP 3, 13115, Saint-Paul-lez-Durance, France.
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10
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Ruiz-Castellano C, Ruiz-Rodríguez M, Tomás G, Soler JJ. Antimicrobial activity of nest-lining feathers is enhanced by breeding activity in avian nests. FEMS Microbiol Ecol 2019; 95:5462650. [PMID: 30985888 DOI: 10.1093/femsec/fiz052] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2018] [Accepted: 04/13/2019] [Indexed: 11/15/2022] Open
Abstract
The use of feathers as nest material has been proposed as a kind of self-medication strategy because antimicrobial-producing microorganisms living on feathers may defend offspring against pathogenic infections. In this case, it is expected that density of antimicrobial-producing bacteria, and their antimicrobial effects, are higher in feathers that line the nests than in eggshells. Moreover, we know that feather pigmentation and breeding activity may influence density and antimicrobial production of bacteria. To test these predictions, we analyzed bacterial densities and antimicrobial activity of bacterial colonies isolated from bird eggshells and nest-lining feathers against bacterial strains comprising potential pathogens. Samples were collected from spotless starling (Sturnus unicolor) nests, and from artificial nests to isolate the effects of breeding activity on bacterial communities. The composition of feathers lining the nests was experimentally manipulated to create groups of nests with pigmented feathers, with unpigmented feathers, with both types of feathers or without feathers. Although we did not detect an effect of experimental feather treatments, we found that bacterial colonies isolated from feathers were more active against the tested bacterial strains than those isolated from eggshells. Moreover, bacterial density on feathers, keratinolytic bacteria on eggshells and antimicrobial activity of colonies isolated were higher in starling nests than in artificial nests. These results suggest that antimicrobial activity of bacteria growing on nest-lining feathers would be one of the mechanisms explaining the previously detected antimicrobial effects of this material in avian nests, and that breeding activity results in nest bacterial communities with higher antimicrobial activity.
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Affiliation(s)
- Cristina Ruiz-Castellano
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Ctra. Sacramento s/n, La Cañada de San Urbano, E-04120 Almería, Spain
| | - Magdalena Ruiz-Rodríguez
- Biologie Integrative des Organismes Marins, Observatoire Océanologique, Sorbonne Universités, Avenue du Fontaulé, 66650 Banyuls-Sur-Mer, France
| | - Gustavo Tomás
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Ctra. Sacramento s/n, La Cañada de San Urbano, E-04120 Almería, Spain
| | - Juan José Soler
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Ctra. Sacramento s/n, La Cañada de San Urbano, E-04120 Almería, Spain
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11
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Musitelli F, Ambrosini R, Caffi M, Caprioli M, Rubolini D, Saino N, Franzetti A, Gandolfi I. Ecological features of feather microbiota in breeding common swifts. ETHOL ECOL EVOL 2018. [DOI: 10.1080/03949370.2018.1459865] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Federica Musitelli
- Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Piazza della Scienza 1, I-20126 Milan, Italy
| | - Roberto Ambrosini
- Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Piazza della Scienza 1, I-20126 Milan, Italy
| | - Mario Caffi
- Osservatorio Ornitologico Pianura Bresciana “Padernello”, Via Cavour 1, I-25022 Borgo San Giacomo (BS), Italy
| | - Manuela Caprioli
- Department of Environmental Science and Policy, University of Milan, Via Celoria 26, I-20133 Milan, Italy
| | - Diego Rubolini
- Department of Environmental Science and Policy, University of Milan, Via Celoria 26, I-20133 Milan, Italy
| | - Nicola Saino
- Department of Environmental Science and Policy, University of Milan, Via Celoria 26, I-20133 Milan, Italy
| | - Andrea Franzetti
- Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Piazza della Scienza 1, I-20126 Milan, Italy
| | - Isabella Gandolfi
- Department of Earth and Environmental Sciences (DISAT), University of Milano-Bicocca, Piazza della Scienza 1, I-20126 Milan, Italy
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12
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Jacob S, Sallé L, Zinger L, Chaine AS, Ducamp C, Boutault L, Russell AF, Heeb P. Chemical regulation of body feather microbiota in a wild bird. Mol Ecol 2018. [PMID: 29533479 DOI: 10.1111/mec.14551] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The microbiota has a broad range of impacts on host physiology and behaviour, pointing out the need to improve our comprehension of the drivers of host-microbiota composition. Of particular interest is whether the microbiota is acquired passively, or whether and to what extent hosts themselves shape the acquisition and maintenance of their microbiota. In birds, the uropygial gland produces oily secretions used to coat feathers that have been suggested to act as an antimicrobial defence mechanism regulating body feather microbiota. However, our comprehension of this process is still limited. In this study, we for the first time coupled high-throughput sequencing of the microbiota of both body feathers and the direct environment (i.e., the nest) in great tits with chemical analyses of the composition of uropygial gland secretions to examine whether host chemicals have either specific effects on some bacteria or nonspecific broad-spectrum effects on the body feather microbiota. Using a network approach investigating the patterns of co-occurrence or co-exclusions between chemicals and bacteria within the body feather microbiota, we found no evidence for specific promicrobial or antimicrobial effects of uropygial gland chemicals. However, we found that one group of chemicals was negatively correlated to bacterial richness on body feathers, and a higher production of these chemicals was associated with a poorer body feather bacterial richness compared to the nest microbiota. Our study provides evidence that chemicals produced by the host might function as a nonspecific broad-spectrum antimicrobial defence mechanism limiting colonization and/or maintenance of bacteria on body feathers, providing new insight about the drivers of the host's microbiota composition in wild organisms.
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Affiliation(s)
- Staffan Jacob
- EDB (Laboratoire Evolution et Diversité Biologique), CNRS-Université Paul Sabatier-ENSFA UMR 5174, Toulouse, France.,Station d'Ecologie Théorique et Expérimentale du CNRS, UMR5321, Moulis, France.,Biodiversity Research Centre, Earth and Life Institute, Université Catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Louis Sallé
- Station d'Ecologie Théorique et Expérimentale du CNRS, UMR5321, Moulis, France
| | - Lucie Zinger
- EDB (Laboratoire Evolution et Diversité Biologique), CNRS-Université Paul Sabatier-ENSFA UMR 5174, Toulouse, France.,Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, PSL Research University, Paris, France
| | - Alexis S Chaine
- Station d'Ecologie Théorique et Expérimentale du CNRS, UMR5321, Moulis, France.,Toulouse School of Economics, Institute for Advanced Studies in Toulouse, Toulouse, France
| | - Christine Ducamp
- EDB (Laboratoire Evolution et Diversité Biologique), CNRS-Université Paul Sabatier-ENSFA UMR 5174, Toulouse, France
| | - Léa Boutault
- EDB (Laboratoire Evolution et Diversité Biologique), CNRS-Université Paul Sabatier-ENSFA UMR 5174, Toulouse, France.,Station d'Ecologie Théorique et Expérimentale du CNRS, UMR5321, Moulis, France
| | - Andrew F Russell
- Centre for Ecology & Conservation, College of Life & Environmental Sciences, University of Exeter, Penryn, Cornwall, UK
| | - Philipp Heeb
- EDB (Laboratoire Evolution et Diversité Biologique), CNRS-Université Paul Sabatier-ENSFA UMR 5174, Toulouse, France
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13
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Ruiz-Rodríguez M, Møller AP, Mousseau TA, Soler JJ. Capacity of blood plasma is higher in birds breeding in radioactively contaminated areas. PLoS One 2017; 12:e0179209. [PMID: 28662048 PMCID: PMC5490992 DOI: 10.1371/journal.pone.0179209] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2017] [Accepted: 05/25/2017] [Indexed: 11/18/2022] Open
Abstract
Background Environmental pollution in general, and radioactive contamination in particular, may deeply affect host-parasite relationships and their consequences for the evolution of organisms. The nuclear accident that occurred more than 30 years ago in Chernobyl resulted in significant changes in diversity and richness of microbial communities that could influence characteristics of animal-bacteria interactions, including host immune responses and competitive interference by bacteria. Given the high mortality rate of birds breeding in radioactively contaminated zones, those with stronger defences against infections should experience significant fitness advantages. Methodology/Principal Findings Here we characterized antimicrobial capacity of barn swallows (Hirundo rustica) from different Ukrainian populations (subject to a gradient of ionizing radiation) against 12 bacterial species. We also quantified constitutive innate immunity, which is the non-specific first barrier of protection of hosts against microbial parasites. We found a positive association between specific antimicrobial capacity of individual hosts and radiation levels in breeding habitats even after controlling for other confounding variables such as sex and age. However, no significant relationship was found between immunocompetence (non-specific response) and background radiation. Conclusions/Significance These results suggest that radiation selects for broad antimicrobial spectra of barn swallows, although not for all bacterial strains. We discuss these results in the framework of host-parasite evolution under extreme environmental conditions.
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Affiliation(s)
- Magdalena Ruiz-Rodríguez
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas, CSIC, La Cañada de San Urbano, Almería, Spain
- Ecologie Systématique Evolution, CNRS, Université Paris-Sud, AgroParisTech, Université Paris-Saclay, Orsay, France
- * E-mail:
| | - Anders P. Møller
- Ecologie Systématique Evolution, CNRS, Université Paris-Sud, AgroParisTech, Université Paris-Saclay, Orsay, France
| | - Timothy A. Mousseau
- Department of Biological Sciences, University of South Carolina, Columbia, South Carolina, United States of America
| | - Juan J. Soler
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas, CSIC, La Cañada de San Urbano, Almería, Spain
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14
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Theodorakopoulos N, Février L, Barakat M, Ortet P, Christen R, Piette L, Levchuk S, Beaugelin-Seiller K, Sergeant C, Berthomieu C, Chapon V. Soil prokaryotic communities in Chernobyl waste disposal trench T22 are modulated by organic matter and radionuclide contamination. FEMS Microbiol Ecol 2017. [DOI: 10.1093/femsec/fix079] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
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15
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Defenses against keratinolytic bacteria in birds living in radioactively contaminated areas. Naturwissenschaften 2016; 103:71. [PMID: 27542091 DOI: 10.1007/s00114-016-1397-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2016] [Accepted: 08/04/2016] [Indexed: 02/07/2023]
Abstract
Microorganisms have shaped the evolution of a variety of defense mechanisms against pathogenic infections. Radioactivity modifies bacterial communities and, therefore, bird hosts breeding in contaminated areas are expected to adapt to the new bacterial environment. We tested this hypothesis in populations of barn swallows (Hirundo rustica) from a gradient of background radiation levels at Chernobyl and uncontaminated controls from Denmark. Investment in defenses against keratinolytic bacteria was measured from feather structure (i.e., susceptibility to degradation) and uropygial secretions. We studied degradability of tail feathers from areas varying in contamination in laboratory experiments using incubation of feathers with a feather-degrading bacterium, Bacillus licheniformis, followed by measurement of the amount of keratin digested. The size of uropygial glands and secretion amounts were quantified, followed by antimicrobial tests against B. licheniformis and quantification of wear of feathers. Feathers of males, but not of females, from highly contaminated areas degraded at a lower rate than those from medium and low contamination areas. However, feathers of both sexes from the Danish populations showed little evidence of degradation. Individual barn swallows from the more contaminated areas of Ukraine produced the largest uropygial secretions with higher antimicrobial activity, although wear of feathers did not differ among males from different populations. In Denmark, swallows produced smaller quantities of uropygial secretion with lower antimicrobial activity, which was similar to swallow populations from uncontaminated areas in Ukraine. Therefore, barn swallows breeding in contaminated areas invested more in all defenses against keratinolytic bacteria than in uncontaminated areas of Ukraine and Denmark, although they had similar levels of feather wear. Strong natural selection exerted by radioactivity may have selected for individuals with higher defense capacity against bacterial infections during the 30 years since the Chernobyl disaster.
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Resistance of Feather-Associated Bacteria to Intermediate Levels of Ionizing Radiation near Chernobyl. Sci Rep 2016; 6:22969. [PMID: 26976674 PMCID: PMC4792135 DOI: 10.1038/srep22969] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2015] [Accepted: 02/22/2016] [Indexed: 11/22/2022] Open
Abstract
Ionizing radiation has been shown to produce negative effects on organisms, although little is known about its ecological and evolutionary effects. As a study model, we isolated bacteria associated with feathers from barn swallows Hirundo rustica from three study areas around Chernobyl differing in background ionizing radiation levels and one control study site in Denmark. Each bacterial community was exposed to four different γ radiation doses ranging from 0.46 to 3.96 kGy to test whether chronic exposure to radiation had selected for resistant bacterial strains. Experimental radiation duration had an increasingly overall negative effect on the survival of all bacterial communities. After exposure to γ radiation, bacteria isolated from the site with intermediate background radiation levels survived better and produced more colonies than the bacterial communities from other study sites with higher or lower background radiation levels. Long-term effects of radiation in natural populations might be an important selective pressure on traits of bacteria that facilitate survival in certain environments. Our findings indicate the importance of further studies to understand the proximate mechanisms acting to buffer the negative effects of ionizing radiation in natural populations.
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Do feather-degrading bacteria actually degrade feather colour? No significant effects of plumage microbiome modifications on feather colouration in wild great tits. Naturwissenschaften 2014; 101:929-38. [PMID: 25228345 DOI: 10.1007/s00114-014-1234-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2014] [Revised: 07/28/2014] [Accepted: 08/28/2014] [Indexed: 01/26/2023]
Abstract
Parasites are known to exert selective pressures on host life history traits since the energy and nutrients needed to mount an immune response are no longer available to invest in other functions. Bird feathers harbour numerous microorganisms, some of which are able to degrade feather keratin (keratinolytic microorganisms) and affect feather integrity and colouration in vitro. Although named "feather-degrading" microorganisms, experimental evidence for their effects on feathers of free-living birds is still lacking. Here, we tested whether (i) keratinolytic microorganisms can degrade feathers in vivo and thus modify the colour of feathers during the nesting period and (ii) whether feather microorganisms have a long-term effect on the investment in colouration of newly moulted feathers. We designed treatments to either favour or inhibit bacterial growth, thus experimentally modifying plumage bacterial communities, in a wild breeding population of great tits (Parus major). Our analyses revealed no significant effects of the treatments on feather colours. Moreover, we found that differences in bacterial exposure during nesting did not significantly affect the colouration of newly moulted feathers. Our results suggest that significant feather degradation obtained during in vitro studies could have led to an overestimation of the potential of keratinolytic microorganisms to shape feather colouration in free-living birds.
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Uropygial gland size and composition varies according to experimentally modified microbiome in Great tits. BMC Evol Biol 2014; 14:134. [PMID: 24938652 PMCID: PMC4074404 DOI: 10.1186/1471-2148-14-134] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2014] [Accepted: 06/11/2014] [Indexed: 12/31/2022] Open
Abstract
Background Parasites exert important selective pressures on host life history traits. In birds, feathers are inhabited by numerous microorganisms, some of them being able to degrade feathers or lead to infections. Preening feathers with secretions of the uropygial gland has been found to act as an antimicrobial defence mechanism, expected to regulate feather microbial communities and thus limit feather abrasion and infections. Here, we used an experimental approach to test whether Great tits (Parus major) modify their investment in the uropygial gland in response to differences in environmental microorganisms. Results We found that males, but not females, modified the size of their gland when exposed to higher bacterial densities on feathers. We also identified 16 wax esters in the uropygial gland secretions. The relative abundance of some of these esters changed in males and females, while the relative abundance of others changed only in females when exposed to greater bacterial loads on feathers. Conclusion Birds live in a bacterial world composed of commensal and pathogenic microorganisms. This study provides the first experimental evidence for modifications of investment in the defensive trait that is the uropygial gland in response to environmental microorganisms in a wild bird.
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McMahon DM, Vdovenko VY, Karmaus W, Kondrashova V, Svendsen E, Litvinetz OM, Stepanova YI. Effects of long-term low-level radiation exposure after the Chernobyl catastrophe on immunoglobulins in children residing in contaminated areas: prospective and cross-sectional studies. Environ Health 2014; 13:36. [PMID: 24886042 PMCID: PMC4030024 DOI: 10.1186/1476-069x-13-36] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2013] [Accepted: 05/01/2014] [Indexed: 05/15/2023]
Abstract
BACKGROUND After the Chernobyl nuclear incident in 1986, children in the Narodichesky region, located 80 km west of the Chernobyl Power Plant, were exposed to 137Cesium (137Cs). Little is known about the effects of chronic low-level radiation on humoral immune responses in children residing in contaminated areas. METHODS In four different approaches we investigated the effect of residential 137Cs exposure on immunoglobulins A, G, M, and specific immunoglobulin E in children. In a dynamic cohort (1993-1998) we included 617 children providing 2,407 repeated measurements; 421 and 523 children in two cross-sectional samples (1997-1998 and 2008-2010, respectively); and 25 participants in a small longitudinal cohort (1997-2010). All medical exams, blood collections, and analyses were conducted by the same team. We used mixed linear models to analyze repeated measurements in cohorts and general linear regression models for cross-sectional studies. RESULTS Residential soil contamination in 2008 was highly correlated with the individual body burden of 137Cs. Serum IgG and IgM concentrations increased between 1993 and 1998. Children with higher 137Cs soil exposure had lower serum IgG levels, which, however, increased in the small cohort assessed between 1997 and 2010. Children within the fourth quintile of 137Cs soil exposure (266-310 kBq/m2) had higher IgM serum concentrations between 1993 and 1998 but these declined between 1997 and 2010. IgA remained stable with median 137Cs exposures related to higher IgA levels, which was corroborated in the cross-sectional study of 2008-2010. Specific IgE against indoor allergens was detected less often in children with higher 137Cs exposure. CONCLUSIONS Our findings show radiation-related alterations of immunoglobulins which by themselves do not constitute adverse health effects. Further investigations are necessary to understand how these changes affect health status.
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Affiliation(s)
- Daria M McMahon
- Arnold School of Public Health, University of South Carolina, 800 Sumter Street, Columbia, SC 29208, USA
| | - Vitaliy Y Vdovenko
- Research Center for Radiation Medicine, Academy of Medical Sciences of Ukraine, 53 Melnikova St, Kiev 04050, Ukraine
| | - Wilfried Karmaus
- Division of Epidemiology, Biostatistics, and Environmental Health Science, School of Public Health University of Memphis, 301 Robison Hall, Memphis 38152 TN, USA
| | - Valentina Kondrashova
- Research Center for Radiation Medicine, Academy of Medical Sciences of Ukraine, 53 Melnikova St, Kiev 04050, Ukraine
| | - Erik Svendsen
- Tulane University School of Public Health and Tropical Medicine, 1440 Canal Street, New Orleans 70112 LA, USA
| | - Oksana M Litvinetz
- Research Center for Radiation Medicine, Academy of Medical Sciences of Ukraine, 53 Melnikova St, Kiev 04050, Ukraine
| | - Yevgenia I Stepanova
- Research Center for Radiation Medicine, Academy of Medical Sciences of Ukraine, 53 Melnikova St, Kiev 04050, Ukraine
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Schneeberger K, Czirják GÁ, Voigt CC. Measures of the constitutive immune system are linked to diet and roosting habits of neotropical bats. PLoS One 2013; 8:e54023. [PMID: 23342064 PMCID: PMC3544667 DOI: 10.1371/journal.pone.0054023] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2012] [Accepted: 12/07/2012] [Indexed: 12/13/2022] Open
Abstract
Ecological and social factors are central in the emergence and transmission of infectious diseases, thus bearing the potential for shaping a species’ immune functions. Although previous studies demonstrated a link between social factors and the cellular immune system for captive mammals, it is yet poorly understood how ecological factors are connected with the different branches of the immune system in wild populations. Here, we tested how variation in aspects of the constitutive cellular and humoral immune system of free ranging bats is associated with two ecological factors that likely influence the putative risk of species to become infected by parasites and pathogens: diet and shelter. We found that white blood cell counts of 24 syntopic Neotropical bat species varied with the species’ diet and body mass. Bats that included at least partially vertebrates in their diet exhibited the highest white blood cell counts, followed by phytophagous and insectivorous species, which is in agreement with the assumption that the immune system varies with the pathogen transmission risk of a trophic level. The soluble part of the constitutive immune response, assessed by an in vitro bacterial killing assay, decreased with increasing roost permanence. Our results suggest that the ecology is an important factor in the evolution of the immune system in bats and probably also other mammals.
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Czirják GA, Pap PL, Vágási CI, Giraudeau M, Mureşan C, Mirleau P, Heeb P. Preen gland removal increases plumage bacterial load but not that of feather-degrading bacteria. Naturwissenschaften 2013; 100:145-51. [PMID: 23288399 DOI: 10.1007/s00114-012-1005-2] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2012] [Revised: 11/30/2012] [Accepted: 12/01/2012] [Indexed: 11/29/2022]
Abstract
The preen gland is a holocrine sebaceous gland of the avian integument which produces an oily secretion that is spread on the plumage during preening. It has been suggested that birds may defend themselves against feather-degrading bacteria (FDB) and other potential pathogens using preen gland secretions. However, besides some in vitro studies, the in vivo bacterial inhibitory effects of the preen oil on the abundance of feather-associated bacterial species has not yet been studied in passerines. Here we tested the effect of gland removal on the abundance of FDB and other-cultivable bacterial loads (OCB) of male house sparrows (Passer domesticus). Our results did not support earlier results on in vitro antibacterial activity of preen oil against FDB since the absence of the preen gland did not significantly affect their loads related to the control birds. In contrast, we found that preen gland removal led to higher loads of OCB. This result suggests that the antimicrobial spectrum of the preen oil is broader than previously thought and that, by reducing the overall feather bacterial loads, the preen gland could help birds to protect themselves against a variety of potentially harmful bacteria.
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Affiliation(s)
- Gábor Arpád Czirják
- Laboratoire Évolution et Diversité Biologique, UMR 5174 Centre National de la Recherche Scientifique-Ecole Nationale de Formation Agronomique-Université Paul Sabatier, 118 Route de Narbonne, 31062, Toulouse, France.
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Giraudeau M, Czirják GÁ, Duval C, Bretagnolle V, Gutierrez C, Guillon N, Heeb P. Effect of preen oil on plumage bacteria: an experimental test with the mallard. Behav Processes 2012; 92:1-5. [PMID: 22940115 DOI: 10.1016/j.beproc.2012.08.001] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2012] [Revised: 08/01/2012] [Accepted: 08/01/2012] [Indexed: 01/26/2023]
Abstract
Feathers are essential for avian thermoregulation, communication or flight and a reduction of plumage condition may alter these functions and reduce individual fitness. Recently, descriptive studies provided evidence that birds carry feather-degrading bacteria on their plumage that have the ability to degrade feathers rapidly under laboratory conditions. If such bacteria reduce avian fitness, natural selection should favour the evolution of anti-bacterial defences to limit the effects of these detrimental microorganisms. Preening behaviour and associated preen gland secretions have been proposed as the main factor used by birds to limit feather-degrading bacterial growth and some recent in vitro studies provided evidence that uropygial oil inhibited the growth of some keratinolytic strains in passerines. However, preen oil antimicrobial properties remained to be experimentally tested in vivo. We conducted an experiment with mallards (Anas platyrhynchos) onto which we fixed a removable mechanism that blocked access to the uropygial gland in a first group of mallards, whilst birds in a second group had the same removable mechanism but access to their gland and a third group of birds had normal access to their gland. We found no significant effect of our treatment on total and feather-degrading bacterial loads. Three hypotheses may explain the discrepancy between our results and previous in vitro studies. First, in vitro studies may have over-estimated the bactericidal properties of the preen oil. Second, preen gland deprivation may have affected only a small portion of the feather-degrading bacterial community. Third, ducks and passerine oils might have different bactericidal properties.
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Affiliation(s)
- M Giraudeau
- Laboratoire Évolution et Diversité Biologique (EDB), UMR 5174 Centre National de la Recherche Scientifique (CNRS), Université Paul Sabatier (UPS), Ecole Nationale de Formation Agronomique (ENFA), 118 Route de Narbonne, F-31062 Toulouse, France.
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Møller AP, Peralta-Sánchez JM, Nielsen JT, López-Hernández E, Soler JJ. Goshawk prey have more bacteria than non-prey. J Anim Ecol 2011; 81:403-10. [PMID: 22039986 DOI: 10.1111/j.1365-2656.2011.01923.x] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
1. Predators often prey on individuals that are sick or otherwise weakened. Although previous studies have shown higher abundance of parasites in prey, whether prey have elevated loads of micro-organisms remains to be determined. 2. We quantified the abundance of bacteria and fungi on feathers of woodpigeons Columba palumbus L., jays Garrulus glandarius L. and blackbirds Turdus merula L. that either fell prey to goshawks Accipiter gentilis L. or were not depredated. 3. We found an almost three-fold increase in bacterial load of prey compared with non-prey, while there was no significant difference between prey and non-prey in level of fungal infection of the plumage. 4. The results were not confounded by differences in size or mass of feathers, date of collection of feathers, or date of analysis of feathers for micro-organisms. 5. These findings suggest a previously unknown contribution of bacteria to risk of predation, with important implications for behaviour, population ecology and community ecology.
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Affiliation(s)
- A P Møller
- Laboratoire d'Ecologie, Systématique et Evolution, CNRS UMR 8079, Université Paris-Sud, Bâtiment 362, F-91405 Orsay Cedex, France.
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Ragon M, Restoux G, Moreira D, Møller AP, López-García P. Sunlight-exposed biofilm microbial communities are naturally resistant to chernobyl ionizing-radiation levels. PLoS One 2011; 6:e21764. [PMID: 21765911 PMCID: PMC3135598 DOI: 10.1371/journal.pone.0021764] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2011] [Accepted: 06/06/2011] [Indexed: 02/06/2023] Open
Abstract
Background The Chernobyl accident represents a long-term experiment on the effects of exposure to ionizing radiation at the ecosystem level. Though studies of these effects on plants and animals are abundant, the study of how Chernobyl radiation levels affect prokaryotic and eukaryotic microbial communities is practically non-existent, except for a few reports on human pathogens or soil microorganisms. Environments enduring extreme desiccation and UV radiation, such as sunlight exposed biofilms could in principle select for organisms highly resistant to ionizing radiation as well. Methodology/Principal Findings To test this hypothesis, we explored the diversity of microorganisms belonging to the three domains of life by cultivation-independent approaches in biofilms developing on concrete walls or pillars in the Chernobyl area exposed to different levels of radiation, and we compared them with a similar biofilm from a non-irradiated site in Northern Ireland. Actinobacteria, Alphaproteobacteria, Bacteroidetes, Acidobacteria and Deinococcales were the most consistently detected bacterial groups, whereas green algae (Chlorophyta) and ascomycete fungi (Ascomycota) dominated within the eukaryotes. Close relatives to the most radio-resistant organisms known, including Rubrobacter species, Deinococcales and melanized ascomycete fungi were always detected. The diversity of bacteria and eukaryotes found in the most highly irradiated samples was comparable to that of less irradiated Chernobyl sites and Northern Ireland. However, the study of mutation frequencies in non-coding ITS regions versus SSU rRNA genes in members of a same actinobacterial operational taxonomic unit (OTU) present in Chernobyl samples and Northern Ireland showed a positive correlation between increased radiation and mutation rates. Conclusions/Significance Our results show that biofilm microbial communities in the most irradiated samples are comparable to non-irradiated samples in terms of general diversity patterns, despite increased mutation levels at the single-OTU level. Therefore, biofilm communities growing in sunlight exposed substrates are capable of coping with increased mutation rates and appear pre-adapted to levels of ionizing radiation in Chernobyl due to their natural adaptation to periodical desiccation and ambient UV radiation.
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Affiliation(s)
- Marie Ragon
- Unité d'Ecologie, Systématique et Evolution - CNRS UMR8079, Université Paris-Sud, Orsay, France
| | - Gwendal Restoux
- Unité d'Ecologie, Systématique et Evolution - CNRS UMR8079, Université Paris-Sud, Orsay, France
| | - David Moreira
- Unité d'Ecologie, Systématique et Evolution - CNRS UMR8079, Université Paris-Sud, Orsay, France
| | - Anders Pape Møller
- Unité d'Ecologie, Systématique et Evolution - CNRS UMR8079, Université Paris-Sud, Orsay, France
| | - Purificación López-García
- Unité d'Ecologie, Systématique et Evolution - CNRS UMR8079, Université Paris-Sud, Orsay, France
- * E-mail:
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