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For: Hill P, Krištůfek V, Dijkhuizen L, Boddy C, Kroetsch D, van Elsas JD. Land use intensity controls actinobacterial community structure. Microb Ecol 2011;61:286-302. [PMID: 20924760 PMCID: PMC3232471 DOI: 10.1007/s00248-010-9752-0] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2010] [Accepted: 09/11/2010] [Indexed: 05/06/2023]
Number Cited by Other Article(s)
1
Fazal A, Yang M, Han H, Lu G, Hao C, Lai X, Song Y, Ma H, Yin T, Qi J, Sun S, Niu K, Wen Z, Yang Y. Impact of dual Bt-transgenic maize (2A7) on soil microbial communities and enzyme activities: A comparative study with control variety Z58. ENVIRONMENTAL RESEARCH 2024;263:120006. [PMID: 39299448 DOI: 10.1016/j.envres.2024.120006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 09/10/2024] [Accepted: 09/13/2024] [Indexed: 09/22/2024]
2
Wang X, Ganzert L, Bartholomäus A, Amen R, Yang S, Guzmán CM, Matus F, Albornoz MF, Aburto F, Oses-Pedraza R, Friedl T, Wagner D. The effects of climate and soil depth on living and dead bacterial communities along a longitudinal gradient in Chile. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;945:173846. [PMID: 38871316 DOI: 10.1016/j.scitotenv.2024.173846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Revised: 06/03/2024] [Accepted: 06/06/2024] [Indexed: 06/15/2024]
3
Huang L, Rosado AS, Wright A, Corrêa RS, Silva L, Mazza Rodrigues JL. Microbiota recovery in a chronosquences of impoverished Cerrado soils with biosolids applications. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;931:172958. [PMID: 38714255 DOI: 10.1016/j.scitotenv.2024.172958] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Revised: 04/25/2024] [Accepted: 05/01/2024] [Indexed: 05/09/2024]
4
Muscatt G, Cook R, Millard A, Bending GD, Jameson E. Viral metagenomics reveals diverse virus-host interactions throughout the soil depth profile. mBio 2023;14:e0224623. [PMID: 38032184 PMCID: PMC10746233 DOI: 10.1128/mbio.02246-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 10/17/2023] [Indexed: 12/01/2023]  Open
5
Mazumdar R, Saikia K, Thakur D. Potentiality of Actinomycetia Prevalent in Selected Forest Ecosystems in Assam, India to Combat Multi-Drug-Resistant Microbial Pathogens. Metabolites 2023;13:911. [PMID: 37623855 PMCID: PMC10456813 DOI: 10.3390/metabo13080911] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 07/15/2023] [Accepted: 07/25/2023] [Indexed: 08/26/2023]  Open
6
Bao Y, Chen Y, Wang F, Xu Z, Zhou S, Sun R, Wu X, Yan K. East Asian monsoon manipulates the richness and taxonomic composition of airborne bacteria over China coastal area. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023;875:162581. [PMID: 36889406 DOI: 10.1016/j.scitotenv.2023.162581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2022] [Revised: 01/23/2023] [Accepted: 02/27/2023] [Indexed: 06/18/2023]
7
Videvall E, Burraco P, Orizaola G. Impact of ionizing radiation on the environmental microbiomes of Chornobyl wetlands. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023;330:121774. [PMID: 37178954 DOI: 10.1016/j.envpol.2023.121774] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 04/21/2023] [Accepted: 05/02/2023] [Indexed: 05/15/2023]
8
Khomyakova MA, Zavarzina DG, Merkel AY, Klyukina AA, Pikhtereva VA, Gavrilov SN, Slobodkin AI. The first cultivated representatives of the actinobacterial lineage OPB41 isolated from subsurface environments constitute a novel order Anaerosomatales. Front Microbiol 2022;13:1047580. [PMID: 36439822 PMCID: PMC9686372 DOI: 10.3389/fmicb.2022.1047580] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2022] [Accepted: 10/24/2022] [Indexed: 08/01/2023]  Open
9
Ecological Impacts of Aged Freshwater Biofilms on Estuarine Microbial Communities Elucidated Through Microcosm Experiments: A Microbial Invasion Perspective. Curr Microbiol 2022;79:210. [PMID: 35666311 DOI: 10.1007/s00284-022-02903-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Accepted: 05/12/2022] [Indexed: 11/03/2022]
10
Effects of Bacillus amyloliquefaciens QSB-6 on the Growth of Replanted Apple Trees and the Soil Microbial Environment. HORTICULTURAE 2022. [DOI: 10.3390/horticulturae8010083] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
11
Jauregi L, Epelde L, González A, Lavín JL, Garbisu C. Reduction of the resistome risk from cow slurry and manure microbiomes to soil and vegetable microbiomes. Environ Microbiol 2021;23:7643-7660. [PMID: 34792274 DOI: 10.1111/1462-2920.15842] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Accepted: 11/04/2021] [Indexed: 11/30/2022]
12
Mardani-Korrani H, Nakayasu M, Yamazaki S, Aoki Y, Kaida R, Motobayashi T, Kobayashi M, Ohkama-Ohtsu N, Oikawa Y, Sugiyama A, Fujii Y. L-Canavanine, a Root Exudate From Hairy Vetch (Vicia villosa) Drastically Affecting the Soil Microbial Community and Metabolite Pathways. Front Microbiol 2021;12:701796. [PMID: 34646244 PMCID: PMC8503639 DOI: 10.3389/fmicb.2021.701796] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Accepted: 08/30/2021] [Indexed: 12/30/2022]  Open
13
Wang Y, Shi J, Tang L, Zhang Y, Zhang Y, Wang X, Zhang X. Evaluation of Rpf protein of Micrococcus luteus for cultivation of soil actinobacteria. Syst Appl Microbiol 2021;44:126234. [PMID: 34343788 DOI: 10.1016/j.syapm.2021.126234] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 07/09/2021] [Accepted: 07/09/2021] [Indexed: 12/13/2022]
14
Becarelli S, Chicca I, La China S, Siracusa G, Bardi A, Gullo M, Petroni G, Levin DB, Di Gregorio S. A New Ciboria sp. for Soil Mycoremediation and the Bacterial Contribution to the Depletion of Total Petroleum Hydrocarbons. Front Microbiol 2021;12:647373. [PMID: 34177829 PMCID: PMC8221241 DOI: 10.3389/fmicb.2021.647373] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2020] [Accepted: 04/26/2021] [Indexed: 11/24/2022]  Open
15
Montgomery K, Williams TJ, Brettle M, Berengut JF, Zhang E, Zaugg J, Hugenholtz P, Ferrari BC. Persistence and resistance: survival mechanisms of Candidatus Dormibacterota from nutrient-poor Antarctic soils. Environ Microbiol 2021;23:4276-4294. [PMID: 34029441 DOI: 10.1111/1462-2920.15610] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2021] [Revised: 05/18/2021] [Accepted: 05/19/2021] [Indexed: 11/28/2022]
16
Murphy R, Benndorf R, de Beer ZW, Vollmers J, Kaster AK, Beemelmanns C, Poulsen M. Comparative Genomics Reveals Prophylactic and Catabolic Capabilities of Actinobacteria within the Fungus-Farming Termite Symbiosis. mSphere 2021;6:e01233-20. [PMID: 33658277 PMCID: PMC8546716 DOI: 10.1128/msphere.01233-20] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 02/01/2021] [Indexed: 11/20/2022]  Open
17
Zhang W, Bahadur A, Zhang G, Zhang B, Wu X, Chen T, Liu G. Diverse Bacterial Communities From Qaidam Basin of the Qinghai-Tibet Plateau: Insights Into Variations in Bacterial Diversity Across Different Regions. Front Microbiol 2020;11:554105. [PMID: 33042062 PMCID: PMC7530167 DOI: 10.3389/fmicb.2020.554105] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2020] [Accepted: 08/17/2020] [Indexed: 12/20/2022]  Open
18
Zhang B, Wu X, Tai X, Sun L, Wu M, Zhang W, Chen X, Zhang G, Chen T, Liu G, Dyson P. Variation in Actinobacterial Community Composition and Potential Function in Different Soil Ecosystems Belonging to the Arid Heihe River Basin of Northwest China. Front Microbiol 2019;10:2209. [PMID: 31608036 PMCID: PMC6769177 DOI: 10.3389/fmicb.2019.02209] [Citation(s) in RCA: 72] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2019] [Accepted: 09/09/2019] [Indexed: 12/18/2022]  Open
19
Liu H, Hu Z, Zhou M, Hu J, Yao X, Zhang H, Li Z, Lou L, Xi C, Qian H, Li C, Xu X, Zheng P, Hu B. The distribution variance of airborne microorganisms in urban and rural environments. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2019;247:898-906. [PMID: 30823344 DOI: 10.1016/j.envpol.2019.01.090] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2018] [Revised: 10/26/2018] [Accepted: 01/21/2019] [Indexed: 06/09/2023]
20
Evaluation of the Diversity of Probiotic Bacillus, Clostridium, and Bifidobacterium Using the Illumina-Based Sequencing Method. Probiotics Antimicrob Proteins 2019;10:748-754. [PMID: 29039076 DOI: 10.1007/s12602-017-9337-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
21
Illumina-Based Sequencing Analysis Directed Selection for Actinobacterial Probiotic Candidates for Banana Plants. Probiotics Antimicrob Proteins 2019;10:284-292. [PMID: 28560514 DOI: 10.1007/s12602-017-9293-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
22
Goes KCGPD, Lovato GM, Andrade DS. Composition of bacterial community in enrichment cultures of shale by-products from Irati Formation, Brazil. Braz J Microbiol 2018;49:742-748. [PMID: 29551640 PMCID: PMC6175702 DOI: 10.1016/j.bjm.2017.12.009] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2017] [Revised: 12/05/2017] [Accepted: 12/27/2017] [Indexed: 01/20/2023]  Open
23
Hill P, Heberlig GW, Boddy CN. Sampling Terrestrial Environments for Bacterial Polyketides. Molecules 2017;22:E707. [PMID: 28468277 PMCID: PMC6154731 DOI: 10.3390/molecules22050707] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2017] [Revised: 04/14/2017] [Accepted: 04/18/2017] [Indexed: 12/17/2022]  Open
24
Ren C, Sun P, Kang D, Zhao F, Feng Y, Ren G, Han X, Yang G. Responsiveness of soil nitrogen fractions and bacterial communities to afforestation in the Loess Hilly Region (LHR) of China. Sci Rep 2016;6:28469. [PMID: 27334692 PMCID: PMC4917850 DOI: 10.1038/srep28469] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2016] [Accepted: 06/02/2016] [Indexed: 01/06/2023]  Open
25
Harun S, Baker A, Bradley C, Pinay G. Spatial and seasonal variations in the composition of dissolved organic matter in a tropical catchment: the Lower Kinabatangan River, Sabah, Malaysia. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2016;18:137-150. [PMID: 26666759 DOI: 10.1039/c5em00462d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
26
Chroňáková A, Schloter-Hai B, Radl V, Endesfelder D, Quince C, Elhottová D, Šimek M, Schloter M. Response of Archaeal and Bacterial Soil Communities to Changes Associated with Outdoor Cattle Overwintering. PLoS One 2015;10:e0135627. [PMID: 26274496 PMCID: PMC4537298 DOI: 10.1371/journal.pone.0135627] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2015] [Accepted: 07/24/2015] [Indexed: 12/04/2022]  Open
27
Draft Genome Sequence of Streptomyces sp. Strain PBH53, Isolated from an Urban Environment. GENOME ANNOUNCEMENTS 2015;3:3/4/e00859-15. [PMID: 26227608 PMCID: PMC4520906 DOI: 10.1128/genomea.00859-15] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
28
Actinobacterial Flora in Feces of Healthy Cottontail Rabbits (Sylvilagus auduboni). Probiotics Antimicrob Proteins 2014;7:9-13. [DOI: 10.1007/s12602-014-9179-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
29
Hill P, Piel J, Aris-Brosou S, Krištůfek V, Boddy CN, Dijkhuizen L. Habitat-specific type I polyketide synthases in soils and street sediments. J Ind Microbiol Biotechnol 2013;41:75-85. [PMID: 24241933 DOI: 10.1007/s10295-013-1362-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2013] [Accepted: 11/09/2013] [Indexed: 11/26/2022]
30
de Sousa KBA, da Silva TRR, Alencar RB, Baton LA, Naveca FG, Shimabukuro PHF. 16S rRNA gene-based identification of microbiota associated with the parthenogenetic troglobiont sand fly Deanemyia maruaga (Diptera, Psychodidae) from central Amazon, Brazil. Braz J Microbiol 2013;44:325-8. [PMID: 24159323 PMCID: PMC3804217 DOI: 10.1590/s1517-83822013005000013] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2011] [Accepted: 07/02/2012] [Indexed: 02/01/2023]  Open
31
Rampelotto PH, de Siqueira Ferreira A, Barboza ADM, Roesch LFW. Changes in diversity, abundance, and structure of soil bacterial communities in Brazilian Savanna under different land use systems. MICROBIAL ECOLOGY 2013;66:593-607. [PMID: 23624541 DOI: 10.1007/s00248-013-0235-y] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2013] [Accepted: 04/15/2013] [Indexed: 05/10/2023]
32
Impact of logging and forest conversion to oil palm plantations on soil bacterial communities in Borneo. Appl Environ Microbiol 2013;79:7290-7. [PMID: 24056463 DOI: 10.1128/aem.02541-13] [Citation(s) in RCA: 90] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
33
Assessing the Diversity and Composition of Bacterial Communities across a Wetland, Transition, Upland Gradient in Macon County Alabama. DIVERSITY-BASEL 2013. [DOI: 10.3390/d5030461] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
34
The rhizospheres of traditional medicinal plants in Panxi, China, host a diverse selection of actinobacteria with antimicrobial properties. Appl Microbiol Biotechnol 2012;94:1321-35. [PMID: 22286515 DOI: 10.1007/s00253-011-3862-6] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2011] [Revised: 12/18/2011] [Accepted: 12/21/2011] [Indexed: 10/14/2022]
35
Distinct soil bacterial communities revealed under a diversely managed agroecosystem. PLoS One 2012;7:e40338. [PMID: 22844402 PMCID: PMC3402512 DOI: 10.1371/journal.pone.0040338] [Citation(s) in RCA: 64] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2012] [Accepted: 06/06/2012] [Indexed: 12/29/2022]  Open
36
Sanyika TW, Stafford W, Cowan DA. The soil and plant determinants of community structures of the dominant actinobacteria in Marion Island terrestrial habitats, Sub-Antarctica. Polar Biol 2012. [DOI: 10.1007/s00300-012-1160-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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