Anaerobic humus and Fe(III) reduction and electron transport pathway by a novel humus-reducing bacterium, Thauera humireducens SgZ-1

Removal of sulfamethoxazole by Fe(III)-activated peracetic acid combined with ascorbic acid

Ascorbic acid (AA) was used as a reducing agent to improve the Fe(III)-activated peracetic acid (PAA) system for the removal of sulfamethoxazole (SMX) in this work. The efficiency, influencing factors and mechanism of SMX elimination in the AA/Fe(III)/PAA process were studied. The results exhibited that AA facilitated the reduction of Fe(III) to Fe(II) and subsequently improved the activation of PAA and H2O2. Various radicals, including organic radicals (e.g. CH3C(O)O• and CH3C(O)OO•) and hydroxyl radical (HO•), were rapidly formed from the activated PAA and H2O2, resulting in SMX removal. Increasing dosages of PAA and Fe(III) contributed to enhanced SMX degradation, while excessive PAA and Fe(III) did not further promote SMX degradation. Due to the radicals' quenching effect, excess AA hindered SMX elimination in the AA/Fe(III)/PAA process. The presence of HCO 3 - and Cl- inhibited SMX removal in this system, whereas NO 3 - , SO 4 2 - and natural organic matter had little impact on SMX degradation. The transformation pathways of SMX in the AA/Fe(III)/PAA system included hydroxylation, bond cleavage and amino oxidation. This research provides a strategy to enhance the Fe(III)-activated PAA system for the elimination of refractory organic pollutants.

Refractory degradable dissolved organic matter (R-DOM) driving nitrogen removal by the electric field coupled iron‑carbon biofilter (E-ICBF): Performance and microbial mechanisms

Researches on the advanced nitrogen (N) removal of municipal tailwater always overlooked the value of refractory degradable dissolved organic matter (R-DOM). In this study, a novel electric field coupled iron‑carbon biofilter (E-ICBF) was utilized to explore the performance and microbial changes with polyethylene glycol (PEG) as the representative R-DOM. Results demonstrated that the removal efficiencies of E-ICBF for nitrate nitrogen (NO3--N), ammonia nitrogen (NH4+-N), and total nitrogen (TN) improved by 28.76 %, 12.96 %, and 28.45 %, compared to quartz sand biofilter (SBF). Moreover, removal efficiencies of NO3--N and TN in E-ICBF with R-DOM went up by 12.11 % and 14.02 % compared to methanol. Additionally, both PEG and the electric field reduced the microbial richness and diversity. However, PEG promoted the increase of denitrifying bacteria abundance including unclassified_f_Comamonadaceae, Thauera, and unclassified_f_Gallionellaceae. The electric field improved the abundances of genes related to N removal (hao, nasC, nasA, nifH, nifD, nifK) and PEG further enhanced the effect. The abundances of key enzymes [EC:1.7.5.1], [EC:1.7.2.1], [EC:1.7.2.4], and [EC:1.7.2.5] decreased due to the addition of PEG and the electric field mitigated the negative influence. Additionally, the electric field changed relationships between microorganisms and pollutant removal, and improved interspecific relationships between denitrifying bacterial genera and other genera in E-ICBF.

Induced domestication of humic reduction-denitrification coupled bacteria improved treatment of sediment: Performance, remediation effect, and metabolic mechanisms

The high organic matter in river sediment primarily induces black and odorous rebound. Traditional humic-reducing bacteria demonstrate relatively single metabolic functions and restrain the remediation within complex sediment environments. In addition, Ca(NO3)2 is commonly utilized in synergistic with bioremediation to improve the reducing environment of sediments. In this study, a multifunctional bacterial community with humic reduction-denitrification coupled bacteria was domesticated by the step-feeding strategy in an anaerobic baffle reactor (ABR). The performance, remediation effect, and metabolic mechanisms were analyzed. The results indicated that humic-reducing bacteria (HRB) and denitrifying-humic-reducing bacteria (DF/HRB) have quinone-reduction and denitrification capabilities. The synergistic effect of DF/HRBs and Ca(NO3)2 was superior to HRBs and Ca(NO3)2 on the removal of total organic matter(TOM). Microbial community structure analysis revealed an enhanced relative abundance of denitrification and humic-reducing bacteria (e.g., Thauera, Pseudomonas, Sulfurospirillum, Desulfovibrio, Geobacter) in the DF/HRB, resulting in a superior synergistic effect of DF/HRBs with Ca(NO3)2. This work helps to present an innovative approach to domesticate humic-reducing bacteria suited for the remediation environment effectively. It also expands the application of humic-reducing bacteria for in-situ anaerobic remediation of river sediments.

Nitrate and oxygen significantly changed the abundance rather than structure of sulphate-reducing and sulphur-oxidising bacteria in water retrieved from petroleum reservoirs

Sulphate-reducing bacteria (SRB) are the main culprits of microbiologically influenced corrosion in water-flooding petroleum reservoirs, but some sulphur-oxidising bacteria (SOB) are stimulated when nitrate and oxygen are injected, which control the growth of SRB. This study aimed to determine the distributions of SRB and SOB communities in injection-production systems and to analyse the responses of these bacteria to different treatments involving nitrate and oxygen. Desulfovibrio, Desulfobacca, Desulfobulbus, Sulfuricurvum and Dechloromonas were commonly detected via 16S rRNA gene sequencing. Still, no significant differences were observed for either the SRB or SOB communities between injection and production wells. Three groups of water samples collected from different sampling sites were incubated. Statistical analysis of functional gene (dsrB and soxB) clone libraries and quantitative polymerase chain reaction showed that the SOB community structures were more strongly affected by the nitrate and oxygen levels than SRB clustered according to the sampling site; moreover, both the SRB and SOB community abundances significantly changed. Additionally, the highest SRB inhibitory effect and the lowest dsrB/soxB ratio were obtained under high concentrations of nitrate and oxygen in the three groups, suggesting that the synergistic effect of nitrate and oxygen level was strong on the inhibition of SRB by potential SOB.

Long-term effect of acetate and biochar addition on enrichment and activity of denitrifying anaerobic methane oxidation microbes

The denitrifying anaerobic methane oxidation (DAMO) process plays a crucial role in the global carbon/nitrogen cycles and methane emission control, and also has application potential in biological wastewater treatment. However, given that DAMO microbes are susceptible to external conditions such as additional carbon source in the system, it is essential to evaluate the effect of alternative carbon substance on the enrichment efficiency and metabolic activity of DAMO microbes. To this end, this study investigated the effect of acetate (0.1 mmol/L-R2, 0.5 mmol/L-R3) and biochar addition (R4) on the enrichment and activity of DAMO microbes. The long-term operation showed that the NO2--N and CH4 consumption rates in the reactors almost presented the sequence of R4>R2>R3>R1. However, the short-term activity test with isotope labelling showed the sequence of R2>R4>R1>R3. Furthermore, the addition of acetate and biochar improved the electrochemical activity and extracellular polymeric substance (EPS) secretion in the systems. In R4 reactor, the proportion of DAMO bacteria was the highest (7.20%), indicating that the addition of biochar could promote the enrichment of DAMO bacteria, and Thauera was co-enriched with the proportion increasing from 0.26% to 6.73%. While in R1, R2 and R3 reactors, DAMO bacteria were enriched with relatively low abundances (0.10%, 0.23%, 0.15%, respectively), together with methanogens and denitrifiers. This study showed that biochar and acetate with appropriate concentration could enhance the enrichment and activity of DAMO bacteria, the results can provide reference for the enrichment of DAMO microbes and its application in the biological nitrogen removal of wastewater.

Mechanisms, performance, and the impact on microbial structure of direct interspecies electron transfer for enhancing anaerobic digestion-A review

Direct interspecies electron transfer (DIET) has been received tremendous attention, recently, due to the advantages of accelerating methane production via organics reduction during anaerobic digestion (AD) process. DIET-based syntrophic relationships not only occurred with the existence of pili and some proteins in the microorganism, but also can be conducted by conductive materials. Therefore, more researches into understanding and strengthening DIET-based syntrophy have been conducted with the aim of improving methanogenesis kinetics and further enhance methane productivity in AD systems. This study summarized the mechanisms, application and microbial structures of typical conductive materials (carbon-based materials and iron-based materials) during AD reactors operation. Meanwhile, detail analysis of studies on DIET (from substrates, dosage and effectiveness) via conductive materials was also presented in the study. Moreover, the challenges of applying conductive materials in boosting methane production were also proposed, which was supposed to provide a deep insight in DIET for full scale application.

Application of pyritic sludge with an anaerobic granule consortium for nitrate removal in low carbon systems

Granules recovered from a highly reduced anaerobic digester were capable of active nitrogen removal in the absence of exogenous electron donors, averaging 0.25 mg mgNO3--N /gVSS/d over 546 days of operation. Electron mass balance indicated that about half the influent nitrate was converted to ammonia via DNRA and another half denitrified. This capacity was associated with an onion-like structure of multiple layers enriched in reduced iron and sulfur, and a complex microbial community shown by metagenomic sequencing to consist of multiple physiological groups and associated activities, including methanogenesis, denitrification, dissimilatory nitrate reduction to ammonia (DNRA), iron oxidation and reduction, and sulfur reduction and oxidation. Nitrate reduction was supported by both entrained organic material and reduced iron and sulfur species, corresponding to 2.13 mg COD/gVSS/d. Batch incubations showed that approximately 15% of denitrified nitrate was coupled to the oxidation of sulfur derived from both sulfate respiration and granular material enriched in iron-sulfide. Inhibition of sulfate reduction resulted in redirection of electron flow to methanogenesis and, in combination with other batch tests, showed that these granules supported a complex microbial community in which cryptic redox cycles linked carbon, sulfur, and iron oxidation with nitrate, sulfate, iron, and carbon dioxide reduction. This system shows promise for treatment of nitrate contaminated ground water without addition of an external organic carbon source as well as wastewater treatment in combination with (granular) sludge elimination leading in a net reduction of solid treatment costs.

Understanding Microbial Arsenic-Mobilization in Multiple Aquifers: Insight from DNA and RNA Analyses

Biogeochemical processes critically control the groundwater arsenic (As) enrichment; however, the key active As-mobilizing biogeochemical processes and associated microbes in high dissolved As and sulfate aquifers are poorly understood. To address this issue, the groundwater-sediment geochemistry, total and active microbial communities, and their potential functions in the groundwater-sediment microbiota from the western Hetao basin were determined using 16S rRNA gene (rDNA) and associated 16S rRNA (rRNA) sequencing. The relative abundances of either sediment or groundwater total and active microbial communities were positively correlated. Interestingly, groundwater active microbial communities were mainly associated with ammonium and sulfide, while sediment active communities were highly related to water-extractable nitrate. Both sediment-sourced and groundwater-sourced active microorganisms (rRNA/rDNA ratios > 1) noted Fe(III)-reducers (induced by ammonium oxidation) and As(V)-reducers, emphasizing the As mobilization via Fe(III) and/or As(V) reduction. Moreover, active cryptic sulfur cycling between groundwater and sediments was implicated in affecting As mobilization. Sediment-sourced active microorganisms were potentially involved in anaerobic pyrite oxidation (driven by denitrification), while groundwater-sourced organisms were associated with sulfur disproportionation and sulfate reduction. This study provides an extended whole-picture concept model of active As-N-S-Fe biogeochemical processes affecting As mobilization in high dissolved As and sulfate aquifers.

Soil vanadium(V)-reducing related bacteria drive community response to vanadium pollution from a smelting plant over multiple gradients

The mining and smelting of navajoite has resulted in a serious vanadium pollution in regional geological environments and significant influence on soil microorganisms. However, the core microbiome responsible for adjusting community response to vanadium pollution and the driving pattern have been kept unclear. In this study, a suite of surface and profile soil samples over multiple gradients were collected in four directions and distances of 10-2000 m from a vanadium smelting plant in Panzhihua, China. The indigenous microbial communities and vanadium(V)-reducing related bacteria (VRB) were profiled by 16S rRNA gene high-throughput sequencing technique. Five VRB were detected in the original collected soil samples including Bacillus, Geobacter, Clostridium, Pseudomonas and Comamonadaceae based on high-throughput sequencing data analysis, and their abundances were significantly related with the content of vanadium. Low vanadium concentration promoted the growth of VRB, while high vanadium concentration would inhibit VRB multiplication. The Gaussian equation could be used to quantitatively describe the nonlinear relationship between VRB and vanadium. Network analysis demonstrated that the microbial communities were significantly influenced by VRB assemblage, and 1.32-52.77% of microbes in the community showed a close association with VRB. A laboratory incubation experiment also confirmed the core role of VRB to drive community response to vanadium pressure.

Evaluating the effect of biochar on mesophilic anaerobic digestion of waste activated sludge and microbial diversity

This study compared the effects of sewage sludge-derived pyrochar (PC300, PC500, and PC700) and hydrochar (HC180, HC240, and HC300) on mesophilic anaerobic digestion of waste activated sludge (WAS). It was demonstrated that hydrochar can better promote the methane production compared with pyrochar. The highest accumulative methane yield of 132.04 ± 4.41 mL/g VS_added was obtained with HC180 addition. In contrast, the PC500 and PC700 showed a slightly negative effect on methane production. Sludge-derived HC not only accelerated the solubilization and hydrolysis of sludge floc, but also improved the production of acetic acid and propionate, further resulting in improved methane production. Simultaneously, the syntrophic microbes facilitating direct interspecies electron transfer (DIET) such as Syntrophomonas, Peptococcaceae, Methanosaeta and Methanobacterium bred rapidly with the addition of HCs. These results indicated that the hydrochar is more ideal as the accelerant to promote the methane production from mesophilic anaerobic digestion of WAS than the pyrochar.

Enhancement of the denitrification activity by exoelectrogens in single-chamber air cathode microbial fuel cells

Single-chamber microbial fuel cells (MFCs) can efficiently treat wastewater containing nitrate, probably because the interaction between exoelectrogens and denitrifying bacteria may enhance the denitrification activity of MFCs. In this study, the denitrification of nitrate with a wide range of concentrations was investigated by using single-chamber air cathode MFCs. The maximum average denitrification rate of the MFCs inoculated and operated under closed-circuit conditions (Group N-CC) was up to 12.2 ± 0.6 kg NO₃^--N m^-3 d^-1 at a high nitrate concentration of 2000 mg NO₃-N L^-1, which was 74.3% higher than that of the MFCs inoculated and operated under open-circuit conditions and which was significantly higher than those of other MFC systems and many traditional bioreactors. The high denitrification activity of the MFCs of Group N-CC was attributed to the significant reduction of nitrite accumulation through the possible bioelectrochemical nitrite reduction by exoelectrogens that were only enriched at the anodes of the MFCs of Group N-CC. In addition, the MFCs of Group N-CC showed good stability (over 3.5 years) and low apparent activation energy (34.0 kJ mol^-1) of the denitrification, indicating the good coexistence of exoelectrogens (Geobacter) and denitrifying bacteria (Thauera) with high performance on denitrification during the long-term operation.

iTRAQ quantitative proteomic analysis reveals the pathways for methanation of propionate facilitated by magnetite

Methanation of propionate requires syntrophic interaction of propionate-oxidizing bacteria and hydrogenotrophic methanogens, which is referred to as interspecies electron transfer. The present study showed that 10 mg/L conductive magnetite enhanced the methane production rate from propionate by around 44% in batch experiments, and both direct interspecies electron transfer and interspecies H₂ transfer were thermodynamically feasible with the addition of magnetite. The methanation of propionate facilitated by magnetite was also demonstrated in a long-term operated continuous reactor. The methane production rate from acetate by the enriched mixed culture with magnetite was higher than that without magnetite, while similar methane production rates were found from H₂/CO₂ by the enriched mixed culture with and without magnetite. The ability to utilize molecular H₂ indicated interspecies H₂ transfer played a role in the enriched culture with magnetite, and propionate-oxidizing bacteria relating with interspecies H₂ transfer were also detected by metagenomic sequencing. Metagenomic sequencing analysis also showed that Thauera, possibly relating with direct interspecies electron transfer, were enriched with the addition of magnetite. iTRAQ quantitative proteomic analysis, which was used in mixed culture for the first time, showed that magnetite induced the changes of protein expression levels involved in various pathways during the methanation of propionate. The up-regulation of proteins involved in propionate metabolism were found, and they were mainly originated from propionate-oxidizing bacteria which were not reported to be capable of direct interspecies electron transfer until now. Cytochrome c oxidase was also revealed as the possible protein relating with direct interspecies electron transfer considering its up-regulation with the addition of magnetite and origination from Thauera. Most of the up-regulated proteins in methane metabolism were originated from Methanosaeta, while most of the enzymes with down-regulated proteins were originated from Methanosarcina. However, the up-regulated proteins relating with hydrogenotrophic methanogenesis were originated from neither Methanosaeta nor Methanosarcina, indicating they were not involved in direct interspecies electron transfer. The hydrogenotrophic methanogens, e.g. Methanospirillum, Methanosphaerula et al., might be involved in direct interspecies electron transfer. Overall, the present study showed that both direct interspecies electron transfer and interspecies H₂ transfer were present during methanation of propionate facilitated by magnetite.

Magnetite nanoparticles enable a rapid conversion of volatile fatty acids to methane

Evaluation of whether paddy soil enrichments obtained in the presence of magnetite and propionate can accelerate methane production from mixed volatile fatty acids.

Magnetite nanoparticles facilitate methane production from ethanol via acting as electron acceptors

Potential for interspecies hydrogen transfer within paddy soil enrichments obtained via addition of magnetite nanoparticles and ethanol (named as PEM) was investigated. To do this, PEM derived from rice field of Hangzhou (named as PEM-HZ) was employed, because it offered the best methane production performance. Methane production and Fe (III) reduction proceeded in parallel in the presence of magnetite. Inhibition experiments with 2-bromoethane sulfonate (BES) or phosphate showed that interspecies hydrogen transfer and Fe (III) reduction also occurred in methane production from ethanol. 16S rRNA-based Illumina sequencing results showed that Dechloromonas, Thauera, Desulfovibrio and Clostridium were the dominant putative Fe (III) -reducers, and that hydrogenotrophic Methanobacterium accounted for about 88% of the total archaeal community. These results indicated that magnetite nanoparticles that acted as electron acceptor could facilitate rapid oxidation of ethanol by members of the Fe (III) -reducers in PEM-HZ and establishment of the syntrophic relationship of Fe (III) -reducers with Methanobacterium via interspecies hydrogen transfer. Our results could offer a model to understand the microbial interaction with magnetite from a novel angle during methanogenesis.