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Castillo-Novales D, Vega-Celedón P, Larach A, Seeger M, Besoain X. Native Bacteria Are Effective Biocontrol Agents at a Wide Range of Temperatures of Neofusicoccum parvum, Associated with Botryosphaeria Dieback on Grapevine. PLANTS (BASEL, SWITZERLAND) 2025; 14:1043. [PMID: 40219111 PMCID: PMC11990564 DOI: 10.3390/plants14071043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2025] [Revised: 03/18/2025] [Accepted: 03/25/2025] [Indexed: 04/14/2025]
Abstract
Botryosphaeria dieback, a significant grapevine trunk disease (GTD) caused by various pathogens, represents a serious threat to viticulture. Biocontrol emerges as a promising sustainable alternative to chemical control, aligning toward environmentally friendly viticultural practices. This study evaluated the in vitro, in vivo, and in situ biocontrol potential of Chilean native bacteria isolated from wild flora and endophytic communities of grapevine against Neofusicoccum parvum. In vitro biocontrol assays screened 15 bacterial strains at 10, 22, and 30 °C, identifying four Pseudomonas strains with >30% mycelial growth inhibition. In diffusible agar and double plate assays, plant growth-promoting bacteria AMCR2b and GcR15a, which were isolated from native flora, achieved significant inhibition of N. parvum growth, with reductions of up to ~50% (diffusible agar) and up to ~46% (double plate). In vivo experiments on grapevine cuttings revealed that strains AMCR2b and GcR15a inhibited mycelial growth (17-90%); younger grapevines (1-5 years) were more susceptible to N. parvum. In situ trials using Vitis vinifera L. cv. Cabernet Sauvignon and Sauvignon Blanc demonstrated higher fungal susceptibility in Sauvignon Blanc. These results highlight the potential of Pseudomonas sp. AMCR2b and GcR15a to be effective biocontrol agents against GTDs at a wide range of temperatures, contributing to sustainable viticulture.
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Affiliation(s)
- Diyanira Castillo-Novales
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (D.C.-N.); (P.V.-C.); (A.L.)
- Escuela de Agronomía, Facultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, San Francisco s/n La Palma, Quillota 2260000, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, Valparaíso 2390123, Chile
| | - Paulina Vega-Celedón
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (D.C.-N.); (P.V.-C.); (A.L.)
- Escuela de Agronomía, Facultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, San Francisco s/n La Palma, Quillota 2260000, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, Valparaíso 2390123, Chile
| | - Alejandra Larach
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (D.C.-N.); (P.V.-C.); (A.L.)
- Escuela de Agronomía, Facultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, San Francisco s/n La Palma, Quillota 2260000, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, Valparaíso 2390123, Chile
| | - Michael Seeger
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Center of Biotechnology Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (D.C.-N.); (P.V.-C.); (A.L.)
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, Valparaíso 2390123, Chile
| | - Ximena Besoain
- Escuela de Agronomía, Facultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, San Francisco s/n La Palma, Quillota 2260000, Chile
- Millennium Nucleus Bioproducts, Genomics and Environmental Microbiology (BioGEM), Avenida España 1680, Valparaíso 2390123, Chile
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Ujvári G, Capo L, Grassi A, Cristani C, Pagliarani I, Turrini A, Blandino M, Giovannetti M, Agnolucci M. Agronomic strategies to enhance the early vigor and yield of maize. Part I: the role of seed applied biostimulant, hybrid and starter fertilization on rhizosphere bacteria profile and diversity. FRONTIERS IN PLANT SCIENCE 2023; 14:1240310. [PMID: 38023909 PMCID: PMC10651756 DOI: 10.3389/fpls.2023.1240310] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 10/18/2023] [Indexed: 12/01/2023]
Abstract
The sustainable intensification of maize-based systems may reduce greenhouse-gas emissions and the excessive use of non-renewable inputs. Considering the key role that the microbiological fertility has on crop growth and resilience, it is worth of interest studying the role of cropping system on the rhizosphere bacterial communities, that affect soil health and biological soil fertility. In this work we monitored and characterized the diversity and composition of native rhizosphere bacterial communities during the early growth phases of two maize genotypes of different early vigor, using a nitrogen (N)-phosphorus (P) starter fertilization and a biostimulant seed treatment, in a growth chamber experiment, by polymerase chain reaction-denaturing gradient gel electrophoresis of partial 16S rRNA gene and amplicon sequencing. Cluster analyses showed that the biostimulant treatment affected the rhizosphere bacterial microbiota of the ordinary hybrid more than that of the early vigor, both at plant emergence and at the 5-leaf stage. Moreover, the diversity indices calculated from the community profiles, revealed significant effects of NP fertilization on richness and the estimated effective number of species (H2) in both maize genotypes, while the biostimulant had a positive effect on plant growth promoting community of the ordinary hybrid, both at the plant emergence and at the fifth leaf stage. Our data showed that maize genotype was the major factor shaping rhizosphere bacterial community composition suggesting that the root system of the two maize hybrids recruited a different microbiota. Moreover, for the first time, we identified at the species and genus level the predominant native bacteria associated with two maize hybrids differing for vigor. These results pave the way for further studies to be performed on the effects of cropping system and specific crop practices, considering also the application of biostimulants, on beneficial rhizosphere microorganisms.
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Affiliation(s)
- Gergely Ujvári
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Luca Capo
- Department of Agriculture, Forest and Food Sciences, University of Turin, Grugliasco, Italy
| | - Arianna Grassi
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Caterina Cristani
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Irene Pagliarani
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Alessandra Turrini
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Massimo Blandino
- Department of Agriculture, Forest and Food Sciences, University of Turin, Grugliasco, Italy
| | - Manuela Giovannetti
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Monica Agnolucci
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
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Ganugi P, Caffi T, Gabrielli M, Secomandi E, Fiorini A, Zhang L, Bellotti G, Puglisi E, Fittipaldi MB, Asinari F, Tabaglio V, Trevisan M, Lucini L. A 3-year application of different mycorrhiza-based plant biostimulants distinctively modulates photosynthetic performance, leaf metabolism, and fruit quality in grapes ( Vitis vinifera L.). FRONTIERS IN PLANT SCIENCE 2023; 14:1236199. [PMID: 37711298 PMCID: PMC10497758 DOI: 10.3389/fpls.2023.1236199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Accepted: 07/27/2023] [Indexed: 09/16/2023]
Abstract
The use of microbial biostimulants in agriculture is recognized as a sustainable approach to promoting crop productivity and quality due to improved nutrient uptake, enhanced stress tolerance, and improved ability to cope with non-optimal environments. The present paper aimed to comparatively investigate the effect of seven different commercial mycorrhizal-based treatments in terms of yield, phytochemical components, and technological traits of Malvasia di Candia Aromatica grape (Vitis vinifera L.) plants. Metabolomic analysis and photosynthetic performance were first investigated in leaves to point out biochemical differences related to plant growth. Higher photosynthetic efficiency and better PSII functioning were found in biostimulant-treated vines, reflecting an overall decrease in photoinhibition compared to untreated plants. Untargeted metabolomics followed by multivariate statistics highlighted a robust reprogramming of primary (lipids) and secondary (alkaloids and terpenoids) metabolites in treated plants. The analysis of berry yield and chemical components exhibited significant differences depending on the biostimulant product. Generally, berries obtained from treated plants displayed improved contents of polyphenols and sugars, while yield remained unchanged. These results elucidated the significant role of microbial biostimulants in determining the quality of grape berries and eliciting biochemical changes in vines.
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Affiliation(s)
- Paola Ganugi
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Tito Caffi
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Mario Gabrielli
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Elena Secomandi
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
- Department of Sciences, Technologies and Society, University School for Advanced Studies, IUSS, Pavia, Italy
| | - Andrea Fiorini
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Leilei Zhang
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Gabriele Bellotti
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Edoardo Puglisi
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | | | - Florencia Asinari
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Vincenzo Tabaglio
- Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Marco Trevisan
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | - Luigi Lucini
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
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Sarkar AK, Sadhukhan S. Unearthing the alteration in plant volatiles induced by mycorrhizal fungi: A shield against plant pathogens. PHYSIOLOGIA PLANTARUM 2023; 175:e13845. [PMID: 36546667 DOI: 10.1111/ppl.13845] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Accepted: 12/05/2022] [Indexed: 06/17/2023]
Abstract
Plants produce a large range of structurally varied low molecular weight secondary metabolites, which evaporate, known as volatile organic compounds (VOCs). Several of them are emitted in response to biotic stress as a defensive measure against pathogen attacks. Arbuscular Mycorrhizal Fungi (AMFs) can change the VOC pattern in parts of the plant and may promote plant defense via direct or indirect mechanisms. Mycorrhization of plants positively affects plant immunization along with growth and yield. The presence of AMF may raise the concentration of phenolic compounds and the activity of critical defense-related enzymes. AMF-induced changes in plant chemistry and associated volatile emissions lead to stronger immunity against pathogenic microorganisms. Despite substantial research into the origins of diversity in VOC-mediated plant communication, very little is known about the mechanism of influence of several AMFs on plant VOC emissions and modulation of plant immunization. Moreover, the molecular mechanism for VOC sensing in plants and mycorrhizal association is still unclear. In the present review, we have presented an up-to-date understanding of the cross-talk of AMF and VOC patterns in plants and the subsequent modulation of resistance against microbial pathogens.
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Affiliation(s)
- Anup Kumar Sarkar
- Department of Botany, Dukhulal Nibaran Chandra College, Murshidabad, West Bengal, India
- Plant Molecular Biology Laboratory, Department of Botany, Raiganj University, Uttar Dinajpur, West Bengal, India
| | - Sanjoy Sadhukhan
- Plant Molecular Biology Laboratory, Department of Botany, Raiganj University, Uttar Dinajpur, West Bengal, India
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Zeni V, Grassi A, Santin M, Ricciardi R, Pieracci Y, Flamini G, Di Giovanni F, Marmugi M, Agnolucci M, Avio L, Turrini A, Giovannetti M, Castiglione MR, Ranieri A, Canale A, Lucchi A, Agathokleous E, Benelli G. Leaf UV-B Irradiation and Mycorrhizal Symbionts Affect Lettuce VOC Emissions and Defence Mechanisms, but Not Aphid Feeding Preferences. INSECTS 2022; 14:insects14010020. [PMID: 36661948 PMCID: PMC9866836 DOI: 10.3390/insects14010020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Revised: 12/12/2022] [Accepted: 12/20/2022] [Indexed: 05/06/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) and ultraviolet-B radiation (UV-B) play important roles in plant-insect interactions by altering plant physiology and histology. We hypothesized that UV-B-induced oxidative stress was mitigated by AMF symbiosis. In this study, we conducted a multifactorial experiment to explore lettuce plant response to AMF inoculation and UV-B exposure (0.4 W m-2; 16 h d-1; 2 weeks), either together or individually, as well as the interaction with the polyphagous insect pest Myzus persicae (Sulzer). Lettuce plants subjected to UV-B radiation showed an increase in callose and oxidative stress indicators, as well as a decrease in stomatal density. Mycorrhizal colonization cancelled out the effect of UV-B on stomatal density, while the symbiosis was not affected by UV-B treatment. The plant volatile emission was significantly altered by UV-B treatment. Specifically, the non-terpene 1-undecene abundance (+M/+UVB: 48.0 ± 7.78%; -M/+UVB: 56.6 ± 14.90%) was increased, whereas the content of the non-terpene aldehydes decanal (+M/+UVB: 8.50 ± 3.90%; -M/+UVB: 8.0 ± 4.87%) and undecanal (+M/+UVB: 2.1 ± 0.65%; -M/+UVB: 1.20 ± 1.18%) and the sesquiterpene hydrocarbons (+M/+UVB: 18.0 ± 9.62 %; -M/+UVB: 19.2 ± 5.90%) was decreased. Mycorrhization, on the other hand, had no significant effect on the plant volatilome, regardless of UV-B treatment. Aphid population was unaffected by any of the treatments, implying a neutral plant response. Overall, this study provides new insights about the interactions among plants, UV-B, and AMF, outlining their limited impact on a polyphagous insect pest.
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Affiliation(s)
- Valeria Zeni
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| | - Arianna Grassi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| | - Marco Santin
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| | - Renato Ricciardi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| | - Ylenia Pieracci
- Department of Pharmacy, University of Pisa, Via Bonanno 6, 56126 Pisa, Italy
| | - Guido Flamini
- Department of Pharmacy, University of Pisa, Via Bonanno 6, 56126 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Filippo Di Giovanni
- Department of Life Science, University of Siena, Via Aldo Moro 2, 53100 Siena, Italy
| | - Margherita Marmugi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| | - Monica Agnolucci
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Luciano Avio
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Alessandra Turrini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Manuela Giovannetti
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Monica Ruffini Castiglione
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
- Department of Biology, University of Pisa, Via L. Ghini 13, 56126 Pisa, Italy
| | - Annamaria Ranieri
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Angelo Canale
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Andrea Lucchi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Interdepartmental Research Center Nutrafood—Nutraceuticals and Food for Health, University of Pisa, 56124 Pisa, Italy
| | - Evgenios Agathokleous
- Department of Ecology, School of Applied Meteorology, Nanjing University of Information Science & Technology (NUIST), Nanjing 210044, China
| | - Giovanni Benelli
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
- Correspondence: ; Tel.: +39-050-221-6141
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Chandrasekaran M, Paramasivan M, Sahayarayan JJ. Microbial Volatile Organic Compounds: An Alternative for Chemical Fertilizers in Sustainable Agriculture Development. Microorganisms 2022; 11:microorganisms11010042. [PMID: 36677334 PMCID: PMC9861404 DOI: 10.3390/microorganisms11010042] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 12/12/2022] [Accepted: 12/20/2022] [Indexed: 12/24/2022] Open
Abstract
Microorganisms are exceptional at producing several volatile substances called microbial volatile organic compounds (mVOCs). The mVOCs allow the microorganism to communicate with other organisms via both inter and intracellular signaling pathways. Recent investigation has revealed that mVOCs are chemically very diverse and play vital roles in plant interactions and microbial communication. The mVOCs can also modify the plant's physiological and hormonal pathways to augment plant growth and production. Moreover, mVOCs have been affirmed for effective alleviation of stresses, and also act as an elicitor of plant immunity. Thus, mVOCs act as an effective alternative to various chemical fertilizers and pesticides. The present review summarizes the recent findings about mVOCs and their roles in inter and intra-kingdoms interactions. Prospects for improving soil fertility, food safety, and security are affirmed for mVOCs application for sustainable agriculture.
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Affiliation(s)
- Murugesan Chandrasekaran
- Department of Food Science and Biotechnology, Sejong University, Neungdong-ro 209, Gwangjin-gu, Seoul 05006, Republic of Korea
- Correspondence: ; Tel.: +82-2-3408-4026
| | - Manivannan Paramasivan
- Department of Microbiology, Bharathidasan University, Tiruchirappalli 620024, Tamilnadu, India
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Duc NH, Vo HTN, van Doan C, Hamow KÁ, Le KH, Posta K. Volatile organic compounds shape belowground plant-fungi interactions. FRONTIERS IN PLANT SCIENCE 2022; 13:1046685. [PMID: 36561453 PMCID: PMC9763900 DOI: 10.3389/fpls.2022.1046685] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2022] [Accepted: 11/09/2022] [Indexed: 06/17/2023]
Abstract
Volatile organic compounds (VOCs), a bouquet of chemical compounds released by all life forms, play essential roles in trophic interactions. VOCs can facilitate a large number of interactions with different organisms belowground. VOCs-regulated plant-plant or plant-insect interaction both below and aboveground has been reported extensively. Nevertheless, there is little information about the role of VOCs derived from soilborne pathogenic fungi and beneficial fungi, particularly mycorrhizae, in influencing plant performance. In this review, we show how plant VOCs regulate plant-soilborne pathogenic fungi and beneficial fungi (mycorrhizae) interactions. How fungal VOCs mediate plant-soilborne pathogenic and beneficial fungi interactions are presented and the most common methods to collect and analyze belowground volatiles are evaluated. Furthermore, we suggest a promising method for future research on belowground VOCs.
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Affiliation(s)
- Nguyen Hong Duc
- Institute of Genetics and Biotechnology, Department of Microbiology and Applied Biotechnology, Hungarian University of Agriculture and Life Sciences (MATE), Godollo, Hungary
| | - Ha T. N. Vo
- Plant Disease Laboratory, Department of Plant Protection, Faculty of Agronomy, Nong Lam University, Ho Chi Minh, Vietnam
| | - Cong van Doan
- Molecular Interaction Ecology, German Centre for Integrative Biodiversity Research (iDIV), Leipzig, Germany
| | - Kamirán Áron Hamow
- Agricultural Institute, Centre for Agricultural Research, Martonvásár, Hungary
| | - Khac Hoang Le
- Plant Disease Laboratory, Department of Plant Protection, Faculty of Agronomy, Nong Lam University, Ho Chi Minh, Vietnam
| | - Katalin Posta
- Institute of Genetics and Biotechnology, Department of Microbiology and Applied Biotechnology, Hungarian University of Agriculture and Life Sciences (MATE), Godollo, Hungary
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Antoszewski M, Mierek-Adamska A, Dąbrowska GB. The Importance of Microorganisms for Sustainable Agriculture-A Review. Metabolites 2022; 12:1100. [PMID: 36422239 PMCID: PMC9694901 DOI: 10.3390/metabo12111100] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2022] [Revised: 11/04/2022] [Accepted: 11/08/2022] [Indexed: 08/27/2023] Open
Abstract
In the face of climate change, progressive degradation of the environment, including agricultural land negatively affecting plant growth and development, endangers plant productivity. Seeking efficient and sustainable agricultural techniques to replace agricultural chemicals is one of the most important challenges nowadays. The use of plant growth-promoting microorganisms is among the most promising approaches; however, molecular mechanisms underneath plant-microbe interactions are still poorly understood. In this review, we summarized the knowledge on plant-microbe interactions, highlighting the role of microbial and plant proteins and metabolites in the formation of symbiotic relationships. This review covers rhizosphere and phyllosphere microbiomes, the role of root exudates in plant-microorganism interactions, the functioning of the plant's immune system during the plant-microorganism interactions. We also emphasized the possible role of the stringent response and the evolutionarily conserved mechanism during the established interaction between plants and microorganisms. As a case study, we discussed fungi belonging to the genus Trichoderma. Our review aims to summarize the existing knowledge about plant-microorganism interactions and to highlight molecular pathways that need further investigation.
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Affiliation(s)
| | - Agnieszka Mierek-Adamska
- Department of Genetics, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
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9
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Jindo K, Goron TL, Pizarro-Tobías P, Sánchez-Monedero MÁ, Audette Y, Deolu-Ajayi AO, van der Werf A, Goitom Teklu M, Shenker M, Pombo Sudré C, Busato JG, Ochoa-Hueso R, Nocentini M, Rippen J, Aroca R, Mesa S, Delgado MJ, Tortosa G. Application of biostimulant products and biological control agents in sustainable viticulture: A review. FRONTIERS IN PLANT SCIENCE 2022; 13:932311. [PMID: 36330258 PMCID: PMC9623300 DOI: 10.3389/fpls.2022.932311] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Accepted: 09/05/2022] [Indexed: 06/16/2023]
Abstract
Current and continuing climate change in the Anthropocene epoch requires sustainable agricultural practices. Additionally, due to changing consumer preferences, organic approaches to cultivation are gaining popularity. The global market for organic grapes, grape products, and wine is growing. Biostimulant and biocontrol products are often applied in organic vineyards and can reduce the synthetic fertilizer, pesticide, and fungicide requirements of a vineyard. Plant growth promotion following application is also observed under a variety of challenging conditions associated with global warming. This paper reviews different groups of biostimulants and their effects on viticulture, including microorganisms, protein hydrolysates, humic acids, pyrogenic materials, and seaweed extracts. Of special interest are biostimulants with utility in protecting plants against the effects of climate change, including drought and heat stress. While many beneficial effects have been reported following the application of these materials, most studies lack a mechanistic explanation, and important parameters are often undefined (e.g., soil characteristics and nutrient availability). We recommend an increased study of the underlying mechanisms of these products to enable the selection of proper biostimulants, application methods, and dosage in viticulture. A detailed understanding of processes dictating beneficial effects in vineyards following application may allow for biostimulants with increased efficacy, uptake, and sustainability.
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Affiliation(s)
- Keiji Jindo
- Agrosystems Research, Wageningen University and Research, Wageningen, Netherlands
| | - Travis L. Goron
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | - Paloma Pizarro-Tobías
- Faculty of Computer Sciences, Multimedia and Telecommunication, Universitat Oberta de Catalunya (UOC), Barcelona, Spain
| | - Miguel Ángel Sánchez-Monedero
- Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura (CEBAS), Agencia Estatal CSIC, Murcia, Spain
| | - Yuki Audette
- School of Environmental Sciences, University of Guelph, Guelph, ON, Canada
- Chitose Laboratory Corp., Kawasaki, Japan
| | | | - Adrie van der Werf
- Agrosystems Research, Wageningen University and Research, Wageningen, Netherlands
| | | | - Moshe Shenker
- The Robert H. Smith Faculty of Agriculture, Food and Environment, Rehovot, Israel
| | - Cláudia Pombo Sudré
- Laboratório de Melhoramento Genético Vegetal, Universidade Estadual do Norte Fluminense Darcy Ribeiro, UENF, Campos dos Goytacazes, Brazil
| | - Jader Galba Busato
- Faculdade de Agronomia e Medicina Veterinária, Campus Universitário Darcy Ribeiro, Universidade de Brasília, Brasília, DF, Brazil
| | - Raúl Ochoa-Hueso
- Department of Biology, IVAGRO, Agroalimentario, Campus del Rio San Pedro, University of Cádiz, Cádiz, Spain
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - Marco Nocentini
- Dipartimento di Scienze e Tecnologie Agrarie, Alimentari, Ambientali e Forestali (DAGRI), Università degli Studi Firenze, Firenze, Italy
| | | | - Ricardo Aroca
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín (EEZ), Agencia Estatal CSIC, Granada, Spain
| | - Socorro Mesa
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín (EEZ), Agencia Estatal CSIC, Granada, Spain
| | - María J. Delgado
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín (EEZ), Agencia Estatal CSIC, Granada, Spain
| | - Germán Tortosa
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín (EEZ), Agencia Estatal CSIC, Granada, Spain
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10
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Zhang W, Yu L, Han B, Liu K, Shao X. Mycorrhizal Inoculation Enhances Nutrient Absorption and Induces Insect-Resistant Defense of Elymus nutans. FRONTIERS IN PLANT SCIENCE 2022; 13:898969. [PMID: 35712553 PMCID: PMC9194685 DOI: 10.3389/fpls.2022.898969] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2022] [Accepted: 05/10/2022] [Indexed: 05/26/2023]
Abstract
The majority of terrestrial plants can form symbiotic associations on their roots with arbuscular mycorrhizal fungi (AMF) in the soil to stimulate the growth and nutrient uptake of the host plant and to improve plant resistance to insects and disease. However, the use of AMF for insect control on gramineous forages requires further study. Here, we evaluated the effects of AMF (Funneliformis mosseae) inoculation on the defense against Locusta migratoria attack in Elymus nutans. Inoculation assays showed that mycorrhizal plants had a higher resistance than non-inoculated plants, as evidenced by plants having more plant biomass, a higher nitrogen and phosphorus content, and greater lipoxygenase (LOX) activity. The results of insect damage showed that in addition to a decrease in the enzyme phenylalanine-ammonia-lyase, the activities of other plant defense-related enzymes (including polyphenol oxidase and β-1,3-glucanase) were increased. A key enzyme, LOX, belonging to the jasmonic acid (JA) signaling pathway was notably increased in mycorrhizal treatment. Volatile organic compounds (VOCs) were identified using gas chromatography mass spectrometry and the results showed that several metabolites with insect-resistant properties, including D-Limonene, p-Xylene, 1,3-Diethylbenzene were detected in mycorrhizal plants. These findings suggest that mycorrhizal inoculation has potential applications in insect management on forage grasses and demonstrates that the JA signaling pathway is essential for insect resistance in Elymus nutans.
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11
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Yu L, Zhang W, Geng Y, Liu K, Shao X. Cooperation With Arbuscular Mycorrhizal Fungi Increases Plant Nutrient Uptake and Improves Defenses Against Insects. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.833389] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Plants have evolved various defense mechanisms to cope with biotic and abiotic stresses. Cooperation with microorganisms, especially arbuscular mycorrhizal fungi (AMF), strengthens the defense capabilities of host plants. To explore the effect of AMF on the growth of Elymus and the defenses against locust feeding, we designed a two-compartment device to connect or cut the mycelia and roots. We used this to investigate communication cues and pathways between donor and receiver plants. We found that AMF significantly increased the nitrogen content and decreased the carbon to nitrogen (C:N) ratio of donor plants and receiver plants and the carbon content of both. After the establishment of the common mycorrhizal network (CMN) with AMF between the two chambers, inoculations of donor plants challenged by locusts caused enhancement in four defense-related enzymes, namely, lipoxygenase, polyphenol oxidase, phenylalanine ammonia lyase, and β-1,3-glucanase, in the receiver plants. The main components of volatile organic compounds emitted by receiver plants were terpenoids. The findings indicated that AMF could not only improve plant growth but also activate the defense response of plants to insect feeding. Four defense enzymes, volatile organic compounds, and carbon and nitrogen content were involved in the defense response, and the mycelial network could act as a conduit to deliver communication signals.
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12
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Lazazzara V, Avesani S, Robatscher P, Oberhuber M, Pertot I, Schuhmacher R, Perazzolli M. Biogenic volatile organic compounds in the grapevine response to pathogens, beneficial microorganisms, resistance inducers, and abiotic factors. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:529-554. [PMID: 34409450 DOI: 10.1093/jxb/erab367] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2021] [Accepted: 08/04/2021] [Indexed: 06/13/2023]
Abstract
The synthesis of volatile organic compounds (VOCs) in plants is triggered in response to external stimuli, and these compounds can migrate to distal tissues and neighbouring receivers. Although grapevine VOCs responsible for wine aroma and plant-insect communications are well characterized, functional properties of VOCs produced in response to phytopathogens, beneficial microorganisms, resistance inducers, and abiotic factors have been less studied. In this review, we focused on the emission patterns and potential biological functions of VOCs produced by grapevines in response to stimuli. Specific grapevine VOCs are emitted in response to the exogenous stimulus, suggesting their precise involvement in plant defence response. VOCs with inhibitory activities against pathogens and responsible for plant resistance induction are reported, and some of them can also be used as biomarkers of grapevine resistance. Likewise, VOCs produced in response to beneficial microorganisms and environmental factors are possible mediators of grapevine-microbe communications and abiotic stress tolerance. Although further functional studies may improve our knowledge, the existing literature suggests that VOCs have an underestimated potential application as pathogen inhibitors, resistance inducers against biotic or abiotic stresses, signalling molecules, membrane stabilizers, and modulators of reactive oxygen species. VOC patterns could also be used to screen for resistant traits or to monitor the plant physiological status.
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Affiliation(s)
- Valentina Lazazzara
- Research and Innovation Centre, Fondazione Edmund Mach, Via E. Mach 1, 38098 San Michele all'Adige, Italy
| | - Sara Avesani
- Research and Innovation Centre, Fondazione Edmund Mach, Via E. Mach 1, 38098 San Michele all'Adige, Italy
- Center for Agriculture Food Environment (C3A), University of Trento, Via E. Mach 1, 38098 San Michele all'Adige, Italy
- Laboratory for Flavours and Metabolites, Laimburg Research Centre, Laimburg 6, Pfatten (Vadena), 39040 Auer (Ora), Italy
| | - Peter Robatscher
- Laboratory for Flavours and Metabolites, Laimburg Research Centre, Laimburg 6, Pfatten (Vadena), 39040 Auer (Ora), Italy
| | - Michael Oberhuber
- Laboratory for Flavours and Metabolites, Laimburg Research Centre, Laimburg 6, Pfatten (Vadena), 39040 Auer (Ora), Italy
| | - Ilaria Pertot
- Research and Innovation Centre, Fondazione Edmund Mach, Via E. Mach 1, 38098 San Michele all'Adige, Italy
- Center for Agriculture Food Environment (C3A), University of Trento, Via E. Mach 1, 38098 San Michele all'Adige, Italy
| | - Rainer Schuhmacher
- Institute of Bioanalytics and Agro-Metabolomics, Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences, Vienna (BOKU), Konrad-Lorenz-Straße 20, 3430 Tulln, Austria
| | - Michele Perazzolli
- Research and Innovation Centre, Fondazione Edmund Mach, Via E. Mach 1, 38098 San Michele all'Adige, Italy
- Center for Agriculture Food Environment (C3A), University of Trento, Via E. Mach 1, 38098 San Michele all'Adige, Italy
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13
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Cataldo E, Fucile M, Mattii GB. Biostimulants in Viticulture: A Sustainable Approach against Biotic and Abiotic Stresses. PLANTS (BASEL, SWITZERLAND) 2022; 11:162. [PMID: 35050049 PMCID: PMC8777853 DOI: 10.3390/plants11020162] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 01/04/2022] [Accepted: 01/06/2022] [Indexed: 05/12/2023]
Abstract
Climate change and disproportionate anthropogenic interventions, such as the excess of phytopharmaceutical products and continuous soil tillage, are jeopardizing viticulture by subjecting plants to continuous abiotic stress. One of the main physiological repercussions of abiotic stress is represented by the unbalanced redox homeostasis due to the overproduction of reactive oxygen species (ROS), ultimately leading to a state of oxidative stress (detrimental to grape quality). To these are added the direct and indirect damages caused by pathogens (biotic stresses). In light of this scenario, it is inevitable that sustainable techniques and sensitivity approaches for environmental and human health have to be applied in viticulture. Sustainable viticulture can only be made with the aid of sustainable products. Biostimulant (PB) applications (including resistance inducers or elicitors) in the vineyard have become interesting maneuvers for counteracting vine diseases and improving grape quality. These also represent a partial alternative to soil fertilization by improving nutrient absorption and avoiding its leaching into the groundwater. Their role as elicitors has important repercussions in the stimulation of the phenylpropanoid pathway by triggering the activation of several enzymes, such as polyphenol oxidase, lipoxygenase, phenylalanine ammonia-lyase, and peroxidase (with the accumulation of phenolic compounds). The present review paper summarizes the PBs' implications in viticulture, gathering historical, functional, and applicative information. This work aims to highlight the innumerable beneficial effects on vines brought by these products. It also serves to spur the scientific community to a greater contribution in investigating the response mechanisms of the plant to positive inductions.
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Affiliation(s)
- Eleonora Cataldo
- Department of Agriculture, Food, Environment and Forestry (DAGRI), University of Florence, 50019 Sesto Fiorentino, Italy; (M.F.); (G.B.M.)
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14
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Sabra A, Netticadan T, Wijekoon C. Grape bioactive molecules, and the potential health benefits in reducing the risk of heart diseases. Food Chem X 2021; 12:100149. [PMID: 34761204 PMCID: PMC8567006 DOI: 10.1016/j.fochx.2021.100149] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 10/07/2021] [Accepted: 10/25/2021] [Indexed: 12/12/2022] Open
Abstract
Grapes are a rich source of bioactive molecules including phenolic acids, flavonoids, anthocyanins, stilbenes, and lipids. These are the compounds which contribute to the health benefits of grape and grape-derived products. They possess antioxidant, antimicrobial, anti-inflammatory, and anti-carcinogenic activities and have wide applications in food and nutraceutical industries. Use of grape extracts rich in these bioactive compounds are linked to reduced incidence of cardiovascular disease and its major risk factors including hypertension (high blood pressure); a clinical condition associated with high mortality worldwide. Therefore, considerable attention has been given to grape-based products to alleviate and treat hypertension. The aim of this review is to summarize the bioactive compounds of grapes, composition changes in different grape extracts and the potential benefits in reducing hypertension.
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Affiliation(s)
- Ali Sabra
- Canadian Centre for Agri-Food Research in Health and Medicine, Winnipeg, Manitoba R2H 2A6, Canada
| | - Thomas Netticadan
- Canadian Centre for Agri-Food Research in Health and Medicine, Winnipeg, Manitoba R2H 2A6, Canada
| | - Champa Wijekoon
- Canadian Centre for Agri-Food Research in Health and Medicine, Winnipeg, Manitoba R2H 2A6, Canada
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15
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Noceto PA, Bettenfeld P, Boussageon R, Hériché M, Sportes A, van Tuinen D, Courty PE, Wipf D. Arbuscular mycorrhizal fungi, a key symbiosis in the development of quality traits in crop production, alone or combined with plant growth-promoting bacteria. MYCORRHIZA 2021; 31:655-669. [PMID: 34633544 DOI: 10.1007/s00572-021-01054-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Accepted: 09/28/2021] [Indexed: 05/14/2023]
Abstract
Modern agriculture is currently undergoing rapid changes in the face of the continuing growth of world population and many ensuing environmental challenges. Crop quality is becoming as important as crop yield and can be characterised by several parameters. For fruits and vegetables, quality descriptors can concern production cycle (e.g. conventional or organic farming), organoleptic qualities (e.g. sweet taste, sugar content, acidity) and nutritional qualities (e.g. mineral content, vitamins). For other crops, however, the presence of secondary metabolites such as anthocyanins or certain terpenes in the targeted tissues is of interest as well, especially for their human health properties. All plants are constantly interacting with microorganisms. These microorganisms include arbuscular mycorrhizal fungi as well as certain soil bacteria that provide ecosystem services related to plant growth, nutrition and quality parameters. This review is an update of current research on the single and combined (co-inoculation) use of arbuscular mycorrhizal fungi and plant growth-promoting rhizobacteria in crop production, with a focus on their positive impacts on crop quality traits (e.g. nutritional value, organoleptic properties). We also highlight the need to dissect mechanisms regulating plant-symbionts and symbiont-symbiont interactions, to develop farming practices and to study a broad range of interactions to optimize the symbiotic potential of root-associated microorganisms.
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Affiliation(s)
- Pierre-Antoine Noceto
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France
| | - Pauline Bettenfeld
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France
- Laboratoire Résistance Induite Et Bioprotection Des Plantes EA 4707, Université de Reims Champagne-Ardenne, Reims, France
| | - Raphael Boussageon
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France
| | - Mathilde Hériché
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France
| | - Antoine Sportes
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France
| | - Diederik van Tuinen
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France
| | - Pierre-Emmanuel Courty
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France
| | - Daniel Wipf
- Agroécologie, AgroSup Dijon, CNRS, Université de Bourgogne, INRAE, Université de Bourgogne Franche-Comté, Dijon, France.
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16
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Goddard ML, Belval L, Martin IR, Roth L, Laloue H, Deglène-Benbrahim L, Valat L, Bertsch C, Chong J. Arbuscular Mycorrhizal Symbiosis Triggers Major Changes in Primary Metabolism Together With Modification of Defense Responses and Signaling in Both Roots and Leaves of Vitis vinifera. FRONTIERS IN PLANT SCIENCE 2021; 12:721614. [PMID: 34512700 PMCID: PMC8424087 DOI: 10.3389/fpls.2021.721614] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 07/19/2021] [Indexed: 06/01/2023]
Abstract
Grapevine (Vitis vinifera L.) is one of the most important crops worldwide but is subjected to multiple biotic and abiotic stresses, especially related to climate change. In this context, the grapevine culture could take advantage of symbiosis through association with arbuscular mycorrhizal fungi (AMF), which are able to establish symbiosis with most terrestrial plants. Indeed, it is well established that mycorrhization improves grapevine nutrition and resistance to stresses, especially water stress and resistance to root pathogens. Thus, it appears essential to understand the effect of mycorrhization on grapevine metabolism and defense responses. In this study, we combined a non-targeted metabolomic approach and a targeted transcriptomic study to analyze changes induced in both the roots and leaves of V. vinifera cv. Gewurztraminer by colonization with Rhizophagus irregularis (Ri). We showed that colonization of grapevine with AMF triggers major reprogramming of primary metabolism in the roots, especially sugar and fatty acid metabolism. On the other hand, mycorrhizal roots had decreased contents of most sugars and sugar acids. A significant increase in several fatty acids (C16:1, linoleic and linolenic acids and the C20 arachidonic and eicosapentaenoic acids) was also detected. However, a downregulation of the JA biosynthesis pathway was evidenced. We also found strong induction of the expression of PR proteins from the proteinase inhibitor (PR6) and subtilase (PR7) families in roots, suggesting that these proteins are involved in the mycorrhiza development but could also confer higher resistance to root pathogens. Metabolic changes induced by mycorrhization were less marked in leaves but involved higher levels of linoleic and linolenic acids and decreased sucrose, quinic, and shikimic acid contents. In addition, Ri colonization resulted in enhanced JA and SA levels in leaves. Overall, this study provides a detailed picture of metabolic changes induced by AMF colonization in a woody, economically important species. Moreover, stimulation of fatty acid biosynthesis and PR protein expression in roots and enhanced defense hormone contents in leaves establish first insight in favor of better resistance of grapevine to various pathogens provided by AMF colonization.
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Affiliation(s)
- Mary-Lorène Goddard
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
- Laboratoire d'Innovation Moléculaire et Applications, Université de Haute-Alsace, Université de Strasbourg, CNRS, LIMA, UMR 7042, Mulhouse, France
| | - Lorène Belval
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
| | - Isabelle R. Martin
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
| | - Lucie Roth
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
- Laboratoire d'Innovation Moléculaire et Applications, Université de Haute-Alsace, Université de Strasbourg, CNRS, LIMA, UMR 7042, Mulhouse, France
| | - Hélène Laloue
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
| | - Laurence Deglène-Benbrahim
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
| | - Laure Valat
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
| | - Christophe Bertsch
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
| | - Julie Chong
- Laboratoire Vigne, Biotechnologies et Environnement (LVBE, UPR 3991), Université de Haute Alsace, Colmar, France
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17
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Above and below-ground involvement in cyclic energy transformation that helps in the establishment of rhizosphere microbial communities. Symbiosis 2021. [DOI: 10.1007/s13199-021-00791-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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18
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Vega-Celedón P, Bravo G, Velásquez A, Cid FP, Valenzuela M, Ramírez I, Vasconez IN, Álvarez I, Jorquera MA, Seeger M. Microbial Diversity of Psychrotolerant Bacteria Isolated from Wild Flora of Andes Mountains and Patagonia of Chile towards the Selection of Plant Growth-Promoting Bacterial Consortia to Alleviate Cold Stress in Plants. Microorganisms 2021; 9:microorganisms9030538. [PMID: 33807836 PMCID: PMC7998784 DOI: 10.3390/microorganisms9030538] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Revised: 03/02/2021] [Accepted: 03/02/2021] [Indexed: 02/02/2023] Open
Abstract
Cold stress decreases the growth and productivity of agricultural crops. Psychrotolerant plant growth-promoting bacteria (PGPB) may protect and promote plant growth at low temperatures. The aims of this study were to isolate and characterize psychrotolerant PGPB from wild flora of Andes Mountains and Patagonia of Chile and to formulate PGPB consortia. Psychrotolerant strains were isolated from 11 wild plants (rhizosphere and phyllosphere) during winter of 2015. For the first time, bacteria associated with Calycera, Orites, and Chusquea plant genera were reported. More than 50% of the 130 isolates showed ≥33% bacterial cell survival at temperatures below zero. Seventy strains of Pseudomonas, Curtobacterium, Janthinobacterium, Stenotrophomonas, Serratia, Brevundimonas, Xanthomonas, Frondihabitans, Arthrobacter, Pseudarthrobacter, Paenarthrobacter, Brachybacterium, Clavibacter, Sporosarcina, Bacillus, Solibacillus, Flavobacterium, and Pedobacter genera were identified by 16S rRNA gene sequence analyses. Ten strains were selected based on psychrotolerance, auxin production, phosphate solubilization, presence of nifH (nitrogenase reductase) and acdS (1-aminocyclopropane-1-carboxylate (ACC) deaminase) genes, and anti-phytopathogenic activities. Two of the three bacterial consortia formulated promoted tomato plant growth under normal and cold stress conditions. The bacterial consortium composed of Pseudomonas sp. TmR5a & Curtobacterium sp. BmP22c that possesses ACC deaminase and ice recrystallization inhibition activities is a promising candidate for future cold stress studies.
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Affiliation(s)
- Paulina Vega-Celedón
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (G.B.); (A.V.); (M.V.); (I.-N.V.); (I.Á.)
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
- Correspondence: (P.V.-C.); (M.S.); Tel.: +56-322654685 (P.V.-C.)
| | - Guillermo Bravo
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (G.B.); (A.V.); (M.V.); (I.-N.V.); (I.Á.)
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
| | - Alexis Velásquez
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (G.B.); (A.V.); (M.V.); (I.-N.V.); (I.Á.)
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
| | - Fernanda P. Cid
- Laboratorio de Ecología Microbiana Aplicada (EMALAB), Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Avenida Francisco Salazar 1145, Temuco 4811230, Chile; (F.P.C.); (M.A.J.)
- Center of Plant-Soil Interaction and Natural Resources Biotechnology, Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Avenida Francisco Salazar 1145, Temuco 4811230, Chile
| | - Miryam Valenzuela
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (G.B.); (A.V.); (M.V.); (I.-N.V.); (I.Á.)
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
| | - Ingrid Ramírez
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
| | - Ingrid-Nicole Vasconez
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (G.B.); (A.V.); (M.V.); (I.-N.V.); (I.Á.)
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
| | - Inaudis Álvarez
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (G.B.); (A.V.); (M.V.); (I.-N.V.); (I.Á.)
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
| | - Milko A. Jorquera
- Laboratorio de Ecología Microbiana Aplicada (EMALAB), Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Avenida Francisco Salazar 1145, Temuco 4811230, Chile; (F.P.C.); (M.A.J.)
- Center of Plant-Soil Interaction and Natural Resources Biotechnology, Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Avenida Francisco Salazar 1145, Temuco 4811230, Chile
| | - Michael Seeger
- Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry, Universidad Técnica Federico Santa María, Avenida España 1680, Valparaíso 2390123, Chile; (G.B.); (A.V.); (M.V.); (I.-N.V.); (I.Á.)
- Center of Biotechnology “Dr. Daniel Alkalay Lowitt”, Universidad Técnica Federico Santa María, General Bari 699, Valparaíso 2390136, Chile;
- Correspondence: (P.V.-C.); (M.S.); Tel.: +56-322654685 (P.V.-C.)
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19
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First Insights into the Effect of Mycorrhizae on the Expression of Pathogen Effectors during the Infection of Grapevine with Plasmopara viticola. SUSTAINABILITY 2021. [DOI: 10.3390/su13031226] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Grapevine (Vitis vinifera L.), widely used for berry and wine production, is highly susceptible to the pathogenic oomycete Plasmopara viticola, the etiological agent of grapevine downy mildew disease. The method commonly used to prevent and control P. viticola infection relies on multiple applications of chemical fungicides. However, with European Union goals to lower the usage of such chemicals in viticulture there is a need to develop new and more sustainable strategies. The use of beneficial microorganisms with biocontrol capabilities, such as the arbuscular mycorrhizal fungi (AMF), has been pointed out as a viable alternative. With this study, we intended to investigate the effect of AMF colonization on the expression of P. viticola effectors during infection of grapevine. Grapevine plants were inoculated with the AMF Rhizophagus irregularis and, after mycorrhizae development, plants were infected with P. viticola. The expression of P. viticola RxLR effectors was analyzed by real-time PCR (qPCR) during the first hours of interaction. Results show that pre-mycorrhizal inoculation of grapevine alters the expression of several P. viticola effectors; namely, PvRxLR28, which presented decreased expression in mycorrhizal plants at the two time points post-infection tested. These results suggest that the pre-inoculation of grapevine with AMF could interfere with the pathogen’s ability to infect grapevine by modulation of pathogenicity effectors expression, supporting the hypothesis that AMF can be used to increase plant resistance to pathogens and promote more sustainable agriculture practices, particularly in viticulture.
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Vishwakarma K, Kumar N, Shandilya C, Mohapatra S, Bhayana S, Varma A. Revisiting Plant-Microbe Interactions and Microbial Consortia Application for Enhancing Sustainable Agriculture: A Review. Front Microbiol 2020; 11:560406. [PMID: 33408698 PMCID: PMC7779480 DOI: 10.3389/fmicb.2020.560406] [Citation(s) in RCA: 84] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Accepted: 11/23/2020] [Indexed: 12/20/2022] Open
Abstract
The present scenario of agricultural sector is dependent hugely on the use of chemical-based fertilizers and pesticides that impact the nutritional quality, health status, and productivity of the crops. Moreover, continuous release of these chemical inputs causes toxic compounds such as metals to accumulate in the soil and move to the plants with prolonged exposure, which ultimately impact the human health. Hence, it becomes necessary to bring out the alternatives to chemical pesticides/fertilizers for improvement of agricultural outputs. The rhizosphere of plant is an important niche with abundant microorganisms residing in it. They possess the properties of plant growth promotion, disease suppression, removal of toxic compounds, and assimilating nutrients to plants. Utilizing such beneficial microbes for crop productivity presents an efficient way to modulate the crop yield and productivity by maintaining healthy status and quality of the plants through bioformulations. To understand these microbial formulation compositions, it becomes essential to understand the processes going on in the rhizosphere as well as their concrete identification for better utilization of the microbial diversity such as plant growth–promoting bacteria and arbuscular mycorrhizal fungi. Hence, with this background, the present review article highlights the plant microbiome aboveground and belowground, importance of microbial inoculants in various plant species, and their subsequent interactive mechanisms for sustainable agriculture.
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Affiliation(s)
| | - Nitin Kumar
- Department of Biotechnology, Periyar Maniammai Institute of Science and Technology, Thanjavur, India
| | | | - Swati Mohapatra
- Amity Institute of Microbial Technology, Amity University, Noida, India
| | - Sahil Bhayana
- Amity Institute of Microbial Technology, Amity University, Noida, India
| | - Ajit Varma
- Amity Institute of Microbial Technology, Amity University, Noida, India
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Velásquez A, Valenzuela M, Carvajal M, Fiaschi G, Avio L, Giovannetti M, D'Onofrio C, Seeger M. The arbuscular mycorrhizal fungus Funneliformis mosseae induces changes and increases the concentration of volatile organic compounds in Vitis vinifera cv. Sangiovese leaf tissue. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 155:437-443. [PMID: 32814280 DOI: 10.1016/j.plaphy.2020.06.048] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Revised: 06/27/2020] [Accepted: 06/27/2020] [Indexed: 05/08/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) are beneficial obligate symbionts of plant roots. Volatile organic compounds (VOCs) participate in plant communication and defence. The aim of this study was to analyse the effects of the arbuscular mycorrhizal fungus Funneliformis mosseae IMA1 on VOCs in Vitis vinifera cv. Sangiovese leaf tissue. Grapevine plants inoculated with F. mosseae IMA1 were incubated for 23 weeks. VOCs were extracted from leaves and identified using headspace solid-phase microextraction (HS-SPME) coupled to GC-MS. VOCs in leaf tissue were strongly enhanced (85%) by F. mosseae IMA1. The mycorrhizal fungus IMA1 modified the levels of specific VOCs synthesised in different anabolic pathways. An increase in volatiles that have been related to plant defences under pathogen/herbivore attack or linked to water stress, such as (E)-2-hexenal, 3-hexenal, geraniol, benzaldehyde and methyl salicylate, was observed in mycorrhizal plants. In contrast, some C13-norisoprenoids decreased strongly in mycorrhizal plants. The study of the effects of AMF on VOCs in grapevine plants may provide useful information to establish sustainable viticultural practices.
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Affiliation(s)
- Alexis Velásquez
- Chemistry Department, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile; Center of Biotechnology "Dr. Daniel Alkalay Lowitt", Universidad Técnica Federico Santa María, General Bari 699, Valparaíso, Chile.
| | - Miryam Valenzuela
- Chemistry Department, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile; Center of Biotechnology "Dr. Daniel Alkalay Lowitt", Universidad Técnica Federico Santa María, General Bari 699, Valparaíso, Chile.
| | - Marcela Carvajal
- Chemistry Department, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile; Center of Biotechnology "Dr. Daniel Alkalay Lowitt", Universidad Técnica Federico Santa María, General Bari 699, Valparaíso, Chile.
| | - Grazia Fiaschi
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, Pisa, Italy.
| | - Luciano Avio
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, Pisa, Italy; Interdepartmental Research Center Nutrafood - Nutraceuticals and Food for Health, University of Pisa, Pisa, Italy.
| | - Manuela Giovannetti
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, Pisa, Italy; Interdepartmental Research Center Nutrafood - Nutraceuticals and Food for Health, University of Pisa, Pisa, Italy.
| | - Claudio D'Onofrio
- Department of Agriculture, Food, and Environment, University of Pisa, Via del Borghetto 80, Pisa, Italy; Interdepartmental Research Center Nutrafood - Nutraceuticals and Food for Health, University of Pisa, Pisa, Italy.
| | - Michael Seeger
- Chemistry Department, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile; Center of Biotechnology "Dr. Daniel Alkalay Lowitt", Universidad Técnica Federico Santa María, General Bari 699, Valparaíso, Chile.
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