Evaluation of the performance and accuracy of Global Positioning System bug transmitters deployed on a small mammal

Habitat selection by free-roaming domestic dogs in rabies endemic countries in rural and urban settings

Domestic dogs can affect human health through bites and pathogen transmission, particularly in resource-poor countries where dogs, including owned ones, predominantly roam freely. Habitat and resource selection analysis methods are commonplace in wildlife studies but have not been used to investigate the environmental resource use of free-roaming domestic dogs (FRDD). The present study implements GPS devices to investigate habitat selection by FRDD from an urban site and a rural site in Indonesia, and one urban and two rural sites in Guatemala (N = 321 dogs). Spatial mixed effects logistic regression models, accounting for heterogeneous distribution of the resources, showed that patterns of habitat selection by FRDD were similar across study sites. The most preferred resources were anthropogenic, being buildings and roads, which implies selection for human proximity. Vegetation and open fields were less preferred and steep terrain was avoided, indicating that FRDD were synanthropic and that their space patterns likely optimised energy use. Results presented here provide novel data on FRDD habitat selection patterns, while improving our understanding of dog roaming behaviour. These findings provide insights into possible high-risk locations for pathogen transmission for diseases such as rabies, and can assist management authorities in the planning and deployment of efficient disease control campaigns, including oral vaccination.

Fine-scale habitat selection of a small mammalian urban adapter: the West European hedgehog (Erinaceus europaeus)

Understanding patterns of habitat selection and factors affecting space use is fundamental in animal conservation. In urban landscapes, such knowledge can be used to advise householders on how best to manage their gardens for wildlife. In this study, we tracked 28 West European hedgehogs (Erinaceus europaeus), a species of conservation concern in the UK, in an area of high-density housing using radio and GPS tags to quantify patterns of habitat use and identify factors associated with the proportion of time spent in individual gardens. Both males and females exhibited a preference for residential gardens, but there were subtle differences between the sexes in relation to house type and front versus back gardens. Hedgehogs spent significantly more time in gardens where artificial food was provided, where a compost heap was present, if foxes (Vulpes vulpes) were infrequent visitors, if it rained overnight and as daylength increased (i.e., shorter nights); garden use was not significantly associated with variables potentially likely to reflect invertebrate prey abundance. These data suggest that the primary positive action that householders can undertake for urban hedgehogs is providing supplementary food. However, householders often feed hedgehogs after they know they are already visiting their garden. Consequently, the presence of artificial food may make it difficult to identify other important influences affecting garden use. Finally, we report that a GPS fix acquisition rate < 60% likely had no major effect on the results of our analyses, but should be a consideration in future studies using this technique on this species and in this habitat.

Impacts and Potential Mitigation of Road Mortality for Hedgehogs in Europe

Transport infrastructure is a pervasive element in modern landscapes and continues to expand to meet the demands of a growing human population and its associated resource consumption. Road-induced mortality is often thought to be a major contributor to the marked declines of European hedgehog populations. This review synthesizes available evidence on the population-level impacts of road mortality and the threat to population viability for the five hedgehog species in Europe. Local and national studies suggest that road mortality can cause significant depletions in population sizes, predominantly removing adult males. Traffic collisions are a probable cause of fragmentation effects, subsequently undermining ecological processes such as dispersal, as well as the genetic variance and fitness of isolated populations. Further studies are necessary to improve population estimates and explicitly examine the consequences of sex- and age-specific mortality rates. Hedgehogs have been reported to use crossing structures, such as road tunnels, yet evaluations of mitigation measures for population survival probability are largely absent. This highlights the need for robust studies that consider population dynamics and genetics in response to mitigation. In light of ongoing declines of hedgehog populations, it is paramount that applied research is prioritised and integrated into a holistic spatial planning process.

Over-Winter Survival and Nest Site Selection of the West-European Hedgehog (Erinaceus europaeus) in Arable Dominated Landscapes

The West-European hedgehog (Erinaceus europaeus) has declined markedly in the UK. The winter hibernation period may make hedgehogs vulnerable to anthropogenic habitat and climate changes. Therefore, we studied two contrasting populations in England to examine patterns of winter nest use, body mass changes and survival during hibernation. No between-site differences were evident in body mass prior to hibernation nor the number of winter nests used, but significant differences in overwinter mass change and survival were observed. Mass change did not, however, affect survival rates; all deaths occurred prior to or after the hibernation period, mainly from predation or vehicle collisions. Hedgehogs consistently nested in proximity to hedgerows, roads and woodlands, but avoided pasture fields; differences between sites were evident for the selection for or avoidance of arable fields, amenity grassland and buildings. Collectively, these data indicate that hibernation was not a period of significant mortality for individuals that had attained sufficient weight (>600 g) pre-hibernation. Conversely, habitat composition did significantly affect the positioning of winter nests, such that different land management practices (historic and current) might potentially influence hibernation success. The limitations of this study and suggestions for future research are discussed.

An easy, flexible solution to attach devices to hedgehogs (Erinaceus europaeus) enables long-term high-resolution studies

Bio-logging is an essential tool for the investigation of behavior, ecology, and physiology of wildlife. This burgeoning field enables the improvement of population monitoring and conservation efforts, particularly for small, elusive animals where data collection is difficult. Device attachment usually requires species-specific solutions to ensure that data loggers exert minimal influence on the animal's behavior and physiology, and ensure high reliability of data capture. External features or peculiar body shapes often make securing devices difficult for long-term monitoring, as in the case with small spiny mammals. Here, we present a method that enables high-resolution, long-term investigations of European hedgehogs (Erinaceus europaeus) via GPS and acceleration loggers. We collected data from 17 wild hedgehogs with devices attached between 9 and 42 days. Our results showed that hedgehogs behaved naturally; as individuals curled, moved through dense vegetation, slipped under fences and built regular day nests without any indication of impediment. Our novel method makes it possible to not only attach high-precision devices for substantially longer than previous efforts, but enables detachment and reattachment of devices to the same individual. This makes it possible to quickly respond to unforeseen events and exchange devices, and overcomes the issue of short battery life common to many lightweight loggers.

Fine- and coarse-scale movements and habitat use by Wood Turtles (Glyptemys insculpta) based on probabilistic modeling of radiotelemetry and GPS-telemetry data

Understanding animal movement and habitat use is critical for the delineation of habitat requiring protection for species at risk. Defining critical habitat requires studies with observations at a fine enough scale to reflect how animals use and move among habitats and include enough individuals to generalize findings to the population. We present results of a multiyear study on 48 adult Wood Turtles (Glyptemys insculpta (Le Conte, 1830)) from two different populations monitored with low-frequency radiotelemetry and high-frequency GPS telemetry. Results demonstrated the propensity for conventional radiotelemetry to underestimate cumulative distances moved and overestimate the amount of habitat used by Wood Turtles. Together the two data sets demonstrate the propensity for Wood Turtles to remain in close proximity to the river and that some differences in habitat use occur between the sexes; males tended to move parallel to the river, whereas females moved perpendicular to the river. The GPS-telemetry data provided a robust spatiotemporal data set that provided a better understanding of frequently used habitat types and features. Overall, study results suggest that currently delineated areas of protected habitat are likely to be effective in conserving these two populations and provides significantly improved, spatially explicit knowledge that can be used to inform further mitigation efforts if necessary.

Using dynamic Brownian Bridge Movement Models to identify home range size and movement patterns in king cobras

Home range estimators are a critical component for understanding animal spatial ecology. The choice of home range estimator in spatial ecology studies can significantly influence management and conservation actions, as different methods lead to vastly different interpretations of movement patterns, habitat selection, as well as home range requirements. Reptile studies in particular have struggled to reach a consensus on the appropriate home range estimators to use, and species with cryptic behavior make home range assessment difficult. We applied dynamic Brownian Bridge Movement Models (dBBMMs) to radio-telemetry data from Ophiophagus hannah, a wide-ranging snake species. We used two focal individuals at different life stages (one juvenile male and one adult male) and sought to identify whether the method would accurately represent both their home range and movement patterns. To assess the suitability of dBBMMs, we compared this novel method with traditional home range estimation methods: minimum convex polygons (MCP) and Kernel density estimators (KDE). Both KDE and MCP incorporated higher levels of Type I and Type II errors, which would lead to biases in our understanding of this species space-use and habitat selection. Although these methods identified some general spatial-temporal patterns, dBBMMs were more efficient at detecting movement corridors and accurately representing long-term shelters sites, showing an improvement over methods traditionally favored in reptile studies. The additional flexibility of the dBBMM approach in providing insight into movement patterns can help further improve conservation and management actions. Additionally, our results suggest that dBBMMs may be more widely applicable in studies that rely on VHF telemetry and not limited to studies employing GPS tags.

Reduced occupancy of hedgehogs (Erinaceus europaeus) in rural England and Wales: The influence of habitat and an asymmetric intra-guild predator

Agricultural landscapes have become increasingly intensively managed resulting in population declines across a broad range of taxa, including insectivores such as the hedgehog (Erinaceus europaeus). Hedgehog declines have also been attributed to an increase in the abundance of badgers (Meles meles), an intra-guild predator. The status of hedgehogs across the rural landscape at large spatial scales is, however, unknown. In this study, we used footprint tracking tunnels to conduct the first national survey of rural hedgehog populations in England and Wales. Single and two-species occupancy modelling was used to quantify hedgehog occupancy in relation to habitat and predator covariates. Hedgehog occupancy was low (22% nationally), and significantly negatively related to badger sett density and positively related to the built environment. Hedgehogs were also absent from 71% of sites that had no badger setts, indicating that large areas of the rural landscape are not occupied by hedgehogs. Our results provide the first field based national survey of hedgehogs, providing a robust baseline for future monitoring. Furthermore, the combined effects of increasing badger abundance and intensive agriculture may have provided a perfect storm for hedgehogs in rural Britain, leading to worryingly low levels of occupancy over large spatial scales.

Hedgehogs on the move: Testing the effects of land use change on home range size and movement patterns of free-ranging Ethiopian hedgehogs

Degradation and alteration of natural environments because of agriculture and other land uses have major consequences on vertebrate populations, particularly on spatial organization and movement patterns. We used GPS tracking to study the effect of land use and sex on the home range size and movement of a typical model species, the Ethiopian hedgehogs. We used free-ranging hedgehogs from two areas with different land use practices: 24 from an area dominated by irrigated farms (12 ♂♂, 12 ♀♀) and 22 from a natural desert environment within a biosphere reserve (12 ♂♂, 10 ♀♀). Animals were significantly heavier in the resource-rich irrigated farms area (417.71 ±12.77SE g) in comparison to the natural desert area (376.37±12.71SE g). Both habitat and sex significantly influenced the home range size of hedgehogs. Home ranges were larger in the reserve than in the farms area. Total home ranges averaged 103 ha (±17 SE) for males and 42 ha (±11SE) for females in the farms area, but were much larger in the reserve averaging 230 ha (±33 SE) for males and 150 ha (±29 SE) for females. The home ranges of individuals of both sexes overlapped. Although females were heavier than males, body weight had no effect on home range size. The results suggest that resources provided in the farms (e.g. food, water, and shelters) influenced animal density and space use. Females aggregated around high-resource areas (either farms or rawdhats), whereas males roamed over greater distances, likely in search of mating opportunities to maximize reproductive success. Most individual home ranges overlapped with many other individuals of either sex, suggesting a non-territorial, promiscuous mating. Patterns of space use and habitat utilization are key factors in shaping aspects of reproductive biology and mating system. To minimize the impacts of agriculture on local wildlife, we recommend that biodiversity-friendly agro-environmental schemes be introduced in the Middle East where the transformation from dry lands to ‘islands of fertility’ is often extreme.

Evaluation of micro-GPS receivers for tracking small-bodied mammals

GPS telemetry markedly enhances the temporal and spatial resolution of animal location data, and recent advances in micro-GPS receivers permit their deployment on small mammals. One such technological advance, snapshot technology, allows for improved battery life by reducing the time to first fix via postponing recovery of satellite ephemeris (satellite location) data and processing of locations. However, no previous work has employed snapshot technology for small, terrestrial mammals. We evaluated performance of two types of micro-GPS (< 20 g) receivers (traditional and snapshot) on a small, semi-fossorial lagomorph, the pygmy rabbit (Brachylagus idahoensis), to understand how GPS errors might influence fine-scale assessments of space use and habitat selection. During stationary tests, microtopography (i.e., burrows) and satellite geometry had the largest influence on GPS fix success rate (FSR) and location error (LE). There was no difference between FSR while animals wore the GPS collars above ground (determined via light sensors) and FSR generated during stationary, above-ground trials, suggesting that animal behavior other than burrowing did not markedly influence micro-GPS errors. In our study, traditional micro-GPS receivers demonstrated similar FSR and LE to snapshot receivers, however, snapshot receivers operated inconsistently due to battery and software failures. In contrast, the initial traditional receivers deployed on animals experienced some breakages, but a modified collar design consistently functioned as expected. If such problems were resolved, snapshot technology could reduce the tradeoff between fix interval and battery life that occurs with traditional micro-GPS receivers. Our results suggest that micro-GPS receivers are capable of addressing questions about space use and resource selection by small mammals, but that additional techniques might be needed to identify use of habitat structures (e.g., burrows, tree cavities, rock crevices) that could affect micro-GPS performance and bias study results.

Performance and Accuracy of Lightweight and Low-Cost GPS Data Loggers According to Antenna Positions, Fix Intervals, Habitats and Animal Movements

Recently developed low-cost Global Positioning System (GPS) data loggers are promising tools for wildlife research because of their affordability for low-budget projects and ability to simultaneously track a greater number of individuals compared with expensive built-in wildlife GPS. However, the reliability of these devices must be carefully examined because they were not developed to track wildlife. This study aimed to assess the performance and accuracy of commercially available GPS data loggers for the first time using the same methods applied to test built-in wildlife GPS. The effects of antenna position, fix interval and habitat on the fix-success rate (FSR) and location error (LE) of CatLog data loggers were investigated in stationary tests, whereas the effects of animal movements on these errors were investigated in motion tests. The units operated well and presented consistent performance and accuracy over time in stationary tests, and the FSR was good for all antenna positions and fix intervals. However, the LE was affected by the GPS antenna and fix interval. Furthermore, completely or partially obstructed habitats reduced the FSR by up to 80% in households and increased the LE. Movement across habitats had no effect on the FSR, whereas forest habitat influenced the LE. Finally, the mean FSR (0.90 ± 0.26) and LE (15.4 ± 10.1 m) values from low-cost GPS data loggers were comparable to those of built-in wildlife GPS collars (71.6% of fixes with LE < 10 m for motion tests), thus confirming their suitability for use in wildlife studies.

Performance of GPS collars on free-ranging bison (Bison bison) in north-western Canada

Context Global positioning system (GPS) collars are increasingly used to study animal ecology. However, understanding their real-world performance is important so that biases in data collection can be addressed. These biases may be species specific. Few studies have examined the influence of sex or temporal variation on locational fix success rates (FSR), and none has assessed GPS-collar performance on bison (Bison bison). Aims To test for sex- and temporal-based biases on the performance of GPS collars on free-ranging bison. Methods Data from 59 deployments of 37 GPS collars on 27 female and seven male bison was used to test for temporal variation and differences between sexes on collar-deployment success rates and four fix acquisition metrics. Key results Most (72.9%) of the 55 GPS collars retrieved malfunctioned before reaching their expected deployment schedule (2 years). We observed a significant difference in the performance of GPS collars deployed on male and females, with those on females functioning almost three times longer. All four fix metrics differed between sexes, with males having significantly better metrics. For females, nightly fix metrics were better than the daytime ones, whereas for males, there was no difference. We observed a significant difference in fix metrics between seasons for females, but not males. Conclusions Although the data from GPS collars may be useful in understanding animal ecology, understanding associated biases can aid in the design of field studies using, and the interpretation of results stemming from, GPS collars. Temporal variation in our study was apparent for females, but not males, and likely related to differences in habitat use and movements. Overall, sex had a significant influence on the success of GPS-collar deployments on bison, and should be examined for other species as well. Implications Bison damage to the collars was the main reason for collar failures. Researchers should plan for catastrophic failures and malfunctions when deploying GPS collars on bison, particularly adult males. Significant differences observed between daily and seasonal FSR for females were small (≤4.9%), and do not warrant post hoc treatment before analyses.