Adsorption and mineralization of REE-lanthanum onto bacterial cell surface

Nanocoated bacteria with H2S generation-triggered self-amplified photothermal and photodynamic effect for breast cancer therapy

Phototherapy utilizing bacterial carriers has demonstrated efficacy in anti-tumor therapy, while the poor delivery of phototherapeutic agents and immunogenicity of microbial substances remain problematic. Herein, we develop a nanocoated bacterial delivery system (IF-S.T) that in situ forms the efficient photothermal agents via biomineralization and improves the intracellular oxygenation, thus triggering the self-enhanced photothermal therapy (PTT) and photodynamic therapy (PDT) on tumor. We densely coat self-assembled IF (ICG-Fe2+) nanocomplex onto the surface of LT2, weakly virulent strain of Salmonella typhimurium (S.T), by bioadaptive nanocoating techniques, masking bacterial virulence factors and reducing the potential immune adverse effects. Upon penetrating into the tumor environment, IF-S.T responds to H2O2 to trigger the removal of the IF coating, where S.T produces excess hydrogen sulfide (H2S). H2S reacts with Fe2+, yielding ferrous sulfide (FeS) for PTT, and inhibits mitochondrial respiration to enhance tumor cell oxygenation for PDT. Consequently, IF-S.T plus laser irradiation exhibits direct tumor cells killing and elicits robust antitumor immune responses, leading to the complete tumor elimination. Thus, IF-S.T represents a promising platform for effective tumor delivery of photoactive agents for improved PTT/PDT efficacy.

Enrichment of Terbium(III) under synergistic effect of biosorption and biomineralization by Bacillus sp. DW015 and Sporosarcina pasteurii

Biosorption and biomineralization are commonly used for the immobilization of metal ions. Biosorption is commonly used as a green method to enrich rare earth ions from wastewater. However, little attention has been paid to the facilitating role of biomineralization in the enrichment of rare earth ions. In this study, a strain of Bacillus sp. DW015, isolated from ion adsorption type rare earth ores and a urease-producing strain Sporosarcina pasteurii were used to enrich rare earth elements (REEs) from an aqueous solution. The results indicate that biomineralization accelerates the enrichment of Terbium(III) compared to biosorption alone. Kinetic analysis suggests that the main mode of action of DW015 was biosorption, following pseudo-second-order kinetics (R2 = 0.998). The biomineralization of DW015 did not significantly contribute to the enrichment of Tb(III), whereas excessive biomineralization of S. pasteurii led to a decrease in the enrichment of Tb(III). A synergistic system of biosorption and biomineralization was established by combining the two bacteria, with the optimal mixed bacteria (S. pasteurii:DW015) ratio being 1:19. This study provides fundamental support for the synergistic effect of biosorption and biomineralization and offers a new reference for future microbial-based enrichment methods.

IMPORTANCE

A weak microbially induced calcium carbonate precipitation (MICP) promotes the enrichment of Tb(III) by bacteria, while a strong MICP leads to the release of Tb(III). However, existing explanations cannot elucidate these mechanisms. In this study, the morphology of the bioprecipitation and the degree of Tb(III) enrichment were analyzed by X-ray diffraction (XRD), scanning electron microscopy (SEM), and energy dispersive spectroscopy (EDS). The data revealed that MICP could drive stable attachment of Tb(III) onto the cell surface, forming a Tb-CaCO3 mixed solid phase. Excessive rapid rate of calcite generation could disrupt the Tb(III) adsorption equilibrium, leading to the release of Tb(III). Therefore, in order for Tb(III) to be stably embedded in calcite, it is necessary to have a sufficient number of adsorption sites on the bacteria and to regulate the rate of MICP. This study provides theoretical support for the process design of MICP for the enrichment of rare earth ions.

Recovery of terbium by Lysinibacillus sp. DW018 isolated from ionic rare earth tailings based on microbial induced calcium carbonate precipitation

Microbial induced calcium carbonate precipitation (MICP) is considered as an environmentally friendly microbial-based technique to remove heavy metals. However, its application in removal and recovery of rare earth from wastewaters remains limited and the process is still less understood. In this study, a urease-producing bacterial strain DW018 was isolated from the ionic rare earth tailings and identified as Lysinibacillus based on 16S rRNA gene sequencing. Its ability and possible mechanism to recover terbium was investigated by using X-ray diffraction (XRD), scanning electron microscopy (SEM), energy dispersive spectroscopy (EDS), and fourier transform infrared spectroscopy (FTIR). The results showed that the urease activity of DW018 could meet the biomineralization requirements for the recovery of Tb3+ from wastewaters. The recovery rate was as high as 98.28% after 10 min of treatment. The optimal conditions for mineralization and recovery were determined as a bacterial concentration of OD600 = 1.0, a temperature range of 35 to 40°C, and a urea concentration of 0.5%. Notably, irrespective of CaCO3 precipitation, the strain DW018 was able to utilize MICP to promote the attachment of Tb3+ to its cell surface. Initially, Tb3+ existed in amorphous form on the bacterial surface; however, upon the addition of a calcium source, Tb3+ was encapsulated in calcite with the growth of CaCO3 at the late stage of the MICP. The recovery effect of the strain DW018 was related to the amino, hydroxyl, carboxyl, and phosphate groups on the cell surface. Overall, the MICP system is promising for the green and efficient recovery of rare earth ions from wastewaters.

Enhancing La(III) biosorption and biomineralization with Micromonospora saelicesensis: Involvement of phosphorus and formation of monazite nano-minerals

The release of rare earth elements (REEs) from mining wastes and their applications has significant environmental implications, necessitating the development of effective prevention and reclamation strategies. The mobility of REEs in groundwater due to microorganisms has garnered considerable attention. In this study, a La(III) resistant actinobacterium, Micromonospora saelicesensis KLBMP 9669, was isolated from REE enrichment soil in GuiZhou, China, and evaluated for its ability to adsorb and biomineralize La(III). The findings demonstrated that M. saelicesensis KLBMP 9669 immobilized La(III) through the physical and chemical interactions, with immobilization being influenced by the initial La(III) concentration, biomass, and pH. The adsorption kinetics followed a pseudo-second-order rate model, and the adsorption isotherm conformed to the Langmuir model. La(III) adsorption capacity of this strain was 90 mg/g, and removal rate was 94 %. Scanning electron microscope (SEM) coupled with energy dispersive X-ray spectrometer (EDS) analysis revealed the coexistence of La(III) with C, N, O, and P. Fourier transform infrared spectroscopy (FTIR) and X-ray photoelectron spectroscopy (XPS) investigations further indicated that carboxyl, amino, carbonyl, and phosphate groups on the mycelial surface may participate in lanthanum adsorption. Transmission electron microscopy (TEM) revealed that La(III) accumulation throughout the M. saelicesensis KLBMP 9669, with some granular deposits on the mycelial surface. Selected area electron diffraction (SAED) confirmed the presence of LaPO4 crystals on the M. saelicesensis KLBMP 9669 biomass after a prolonged period of La(III) accumulation. This post-sorption nano-crystallization on the M. saelicesensis KLBMP 9669 mycelial surface is expected to play a crucial role in limiting the bioimmobilization of REEs in geological repositories.

The Construction of a Microbial Synthesis System for Rare Earth Enrichment and Material Applications

Rare earth materials play an irreplaceable role in biomedical and high technology fields. However, typical mining and extraction approaches to rare earth elements (REEs) often lead to severe environmental problems and resource wastage due to the involvement of hazardous chemicals. Although biomining shows elegant alternatives, there are still grand challenges to sustainably isolate and recover REEs in nature because of insufficient metal-extracting microbes and RE-scavenging macromolecular tools. To obtain high-performance rare earth materials directly from rare earth ore, a new generation of biological synthesis strategies needs to be developed for the efficient preparation of REEs. The microbial synthesis system established here has achieved active biomanufacturing of high-purity rare earth products. Further, through employing robust affinity columns bioconjugated with structurally engineered proteins, outstanding separation of Eu/Lu and Dy/La is acquired with the purity of 99.9% (Eu), 97.1% (La), and 92.7% (Dy). More importantly, in situ one-pot synthesis of lanthanide-dependent methanol dehydrogenase is well harnessed and exclusively adsorbs La, Ce, Pr, and Nd in RE tailing for advanced biocatalysis, indicating high value-added application. Therefore, this novel biosynthetic platform provides an insightful roadmap to expand the scope of chassis engineering in terms of biofoundry and to manufacture valuable bioproducts related to REEs.

Bioadsorption of Terbium(III) by Spores of Bacillus subtilis

Wastewater containing low concentrations of rare earth ions not only constitutes a waste of rare earth resources but also threatens the surrounding environment. It is therefore necessary to develop environmentally friendly methods of recovering rare earth ions. The spores produced by Bacillus are resistant to extreme environments and are effective in the bioadsorption of rare earth ions, but their adsorption behaviors and mechanisms are not well understood. In this study, the cells and spores of Bacillus subtilis PS533 and PS4150 were used as biosorbents, and their adsorption of terbium ions was compared under different conditions. The adsorption characteristics of the spores were investigated, as were the possible mechanisms of interaction between the spores and rare earth ions. The results showed that the PS4150 spores had the best adsorption effect on Tb(III), with the removal percentage reaching 95.2%. Based on a computational simulation, SEM observation, XRD, XPS, and FTIR analyses, it was suggested that the adsorption of Tb(III) by the spores conforms to the pseudo−second−order kinetics and the Langmuir adsorption isotherm model. This indicates that the adsorption process mainly consists of chemical adsorption, and that groups such as amino, hydroxyl, methyl, and phosphate, which are found on the surface of the spores, are involved in the bioadsorption process. All of these findings suggest that Bacillus subtilis spores can be used as a potential biosorbent for the recovery of rare earth ions from wastewater.

Microorganisms Accelerate REE Mineralization in Supergene Environments

Exogenic deposits are an important source of rare earth elements (REEs), especially heavy REEs (HREEs). It is generally accepted that microorganisms are able to dissolve minerals and mobilize elements in supergene environments. However, little is known about the roles of microorganisms in the formation of exogenic deposits such as regolith-hosted REE deposits that are of HREE enrichment and provide over 90% of global HREE demand. In this study, we characterized the microbial community composition and diversity along a complete weathering profile drilled from a regolith-hosted REE deposit in Southeastern China and report the striking contributions of microorganisms to the enrichment of REEs and fractionation between HREEs and light REEs (LREEs). Our results provide evidence that the variations in REE contents are correlated with microbial community along the profile. Both fungi and bacteria contributed to the accumulation of REEs, whereas bacteria played a key role in the fractionation between HREEs and LREEs. Taking advantage of bacteria strains isolated from the profile, Gram-positive bacteria affiliated with Bacillus and Micrococcus preferentially adsorbed HREEs, and teichoic acids in the cell wall served as the main sites for HREE adsorption, leading to an enrichment of HREEs in the deposit. The present study provides the first database of microbial community in regolith-hosted REE deposits. These findings not only elucidate the crucial contribution of fungi and bacteria in the supergene REE mineralization but also provide insights into efficient utilization of mineral resources via a biological pathway.

IMPORTANCE Understanding the role of microorganisms in the formation of regolith-hosted rare earth element (REE) deposits is beneficial for improving the metallogenic theory and deposit exploitation, given that such deposits absolutely exist in subtropical regions with strong microbial activities. Little is known of the microbial community composition and its contribution to REE mineralization in this kind of deposit. Using a combination of high-throughput sequencing, batch adsorption experiments, and spectroscopic characterization, the functional microorganisms contributing to REE enrichment and fractionation are disclosed. For bacteria, the surface carboxyl and phosphate groups are active sites for REE adsorption, while teichoic acids in the cell walls of G⁺ bacteria lead to REE fractionation. The above-mentioned findings not only unravel the importance of microorganisms in the formation of supergene REE deposits but also provide experimental evidence for the bioutilization of REE resources.

Scandium-microorganism interactions in new biotechnologies

Scandium (Sc) plays a special role in high-tech industries because of its wide application in green, space, and defense technologies. However, Sc mining and purification are problematic due to political, technological, and environmental difficulties. The deficit of this element limits global technological development. One sustainable solution to this problem is to use microorganisms to extract Sc from ore and waste, as well as to concentrate and separate it from other elements. Sc also demonstrates attractive metabolic effects on microbes that is of great interest in white biotechnology. Sc increases the production of proteins and secondary metabolites and activates poorly expressed genes. This review offers a comprehensive analysis of current knowledge on the application of Sc-microorganism interactions in promising biotechnologies, its perspectives, and future challenges.

Resource recovery: Adsorption and biomineralization of cerium by Bacillus licheniformis

Cerium is a critical element to modern technologies. Nowadays, its increased applications have led to elevated levels in the environment. Cerium recovery by microorganisms has gained a great deal of attention. Here, our research showed that Bacillus licheniformis could be used to recover Ce³⁺ from aqueous solution. The adsorption capacity of cerium on this bacterial strain achieved 38.93 mg/g (dry weight) biomass. Adsorption kinetics followed a pseudo-second-order rate model, and adsorption isotherm was fitted well with the Freundlich model. Scanning electron microscope (SEM) observations coupled with X-ray energy dispersive spectroscopy (EDS) analysis revealed a spatial association of Ce with C, N, O, S, and P. Fourier transform infrared spectroscopy (FT-IR) analysis further suggested that the phosphate and carboxyl groups on the cell surface might be responsible for the adsorption of cerium. Furthermore, X-ray diffraction (XRD) and transmission electron microscopy (TEM) with electron energy loss spectroscopy (EELS) suggested that cerium initially occurred on the bacterial cell surface as Ce(OH)₃, which was mainly converted to monazite (CePO₄) and a small amount of CeO₂ overtime. Hydrothermal treatment was used to accelerate the mineralization process of cerium by B. licheniformis. The hydrothermal treatment is conducted for comparative analysis of mineralization process in extreme geological condition.

Recovering rare earth elements from contaminated soils: Critical overview of current remediation technologies

Rare earth elements (REE) are essential for sustainable energies such as solar and wind power, with rising demand due to the ambitious goal for a circular society. REE are currently mined from virgin ores while REE-rich contaminated soil is left untreated in the environment. Soil remediation strategies are needed that concomitantly cleanup soil and harvest metals that contribute to process circular economy. In this review we aim to (i) define REE concentrations in contaminated soils as well as (ii) identify soil remediation techniques used in remediating REE from soils, emphasizing the ones that extract REE. Current literature lists REE polluted soils in the vicinities of REE mines, coal mines, high traffic roads and agricultural soils (due to REE association with phosphate fertilizers). We first list the conventional separation methods used in the mining industry and their main strategies in extracting/precipitating REE. Solvent extraction is the most commonly conventional method used followed by electrodeposition of REE at high temperatures. We then highlight soil remediation techniques that are used to treat REE. These techniques can be separated into two types: the ones that (a) stabilize REE in soils, and the ones that (b) extract REE from soils. Bioremediation, soil amendments and others offer stabilization of REE, eventually creating a legacy problem since REE keep accumulating in the soil. Soil remediation techniques that achieve REE extraction are a step closer to resource recovery, contributing to the circularity of REE. Techniques such as phytoremediation, soil washing and electrokinetic treatment show promising extraction results.

Trend of the research on rare earth elements in environmental science

Rare earth elements (REEs) consist of 17 transition metals which are the 15 lanthanides and yttrium and scandium. These elements have great utility in the production of modern technology, especially electronics. However, these materials may pose a serious threat to the environment if handled or disposed of incorrectly; the effects of which are being studied by the field of environmental toxicology. A multitude of studies have indicated that rare earth elements have harmful impacts on biological life, making a reform to the disposal of rare earth elements increasingly pressing. Scientific interest in REEs is constantly rising due to the increased use of REEs due to their utility. In this paper, we display our meta-analysis of a scientific literature database, PubMed, to quantitatively map the temporal flux of research and interest pertaining to REEs, especially in the field of environmental science. Our findings may prove useful for planning research on REEs or predicting the future of REE usage.

Accumulation and Release of Rare Earth Ions by Spores of Bacillus Species and the Location of These Ions in Spores

Two rare earth ions, Tb³⁺ and Dy³⁺, were incorporated into spores of Bacillus species in ≤5 min at neutral pH to 100 to 200 nmol per mg of dry spores, which is equivalent to 2 to 3% of the spore dry weight. The uptake of these ions had, at most, minimal effects on spore wet heat resistance or germination, and the ions were all released upon germination, probably by complex formation with the huge depot of dipicolinic acid (DPA) released when spores germinate. Adsorbed Tb³⁺/Dy³⁺ were also released by exogenous DPA within a few minutes and faster than in spore germination. The accumulation of Tb³⁺/Dy³⁺ was not reduced in Bacillus subtilis spores by several types of coat defects, significant modification of the spore cortex peptidoglycan structure, specific loss of components of the outer spore crust layer, or the absence of DPA in the spore core. All of these findings are consistent with Tb³⁺/Dy³⁺ being accumulated in spores' outer layers, and this was confirmed by transmission electron microscopy. However, the identity of the outer spore components binding the Tb³⁺/Dy³⁺ is not clear. These findings provide new information on the adsorption of rare earth ions by Bacillus spores and suggest this adsorption might have applications in capturing rare earth ions from the environment.IMPORTANCE Biosorption of rare earth ions by growing cells of Bacillus species has been well studied and has attracted attention for possible hydrometallurgy applications. However, the interaction of spores from Bacillus species with rare earth ions has not been well studied. We investigated here the adsorption and/or desorption of two rare earth ions, Tb³⁺ and Dy³⁺, by Bacillus spores, the location of the adsorbed ions, and the spore properties after ion accumulation. The significant adsorption of rare earth ions on the surfaces of Bacillus spores and the ions' rapid release by a chelator could allow the development of these spores as a biosorbent to recover rare earth ions from the environment.

Selective Mineralization and Recovery of Au(III) from Multi-Ionic Aqueous Systems by Bacillus licheniformis FZUL-63

The recovery of precious metals is a project with both economic and environmental significance. In this paper, how to use bacterial mineralization to selectively recover gold from multi-ionic aqueous systems is presented. The Bacillus licheniformis FZUL-63, isolated from a landscape lake in Fuzhou University, was shown to selectively mineralize and precipitate gold from coexisting ions in aqueous solution. The removal of Au(III) almost happened in the first hour. Scanning electron microscope with X-ray energy dispersive spectroscopy (SEM/EDS-mapping) results and fourier transform infrared spectroscopy (FTIR) data show that the amino, carboxyl, and phosphate groups on the surface of the bacteria are related to the adsorption of gold ions. X-ray photoelectron spectroscopy (XPS) results implied that Au(III) ions were reduced to those that were monovalent, and the Au(I) was then adsorbed on the bacterial surface at the beginning stage (in the first hour). X-ray diffraction (XRD) results showed that the gold biomineralization began about 10 h after the interaction between Au(III) ions and bacteria. Au(III) mineralization has rarely been influenced by other co-existing metal ions. Transmission electron microscope (TEM) analysis shows that the gold nanoparticles have a polyhedral structure with a particle size of ~20 nm. The Bacillus licheniformis FZUL-63 could selectively mineralize and recover 478 mg/g (dry biomass) gold from aqua regia-based metal wastewater through four cycles. This could be of great potential in practical applications.

Cyanobacterial promoted enrichment of rare earth elements europium, samarium and neodymium and intracellular europium particle formation

In the recovery of rare earth elements (REE) microbial biosorption has shown its theoretical ability as an extremely economically and environmentally friendly production method in the last few years. To evaluate the ability of two cyanobacterial strains, namely Anabaena spec. and Anabaena cylindrica to enrich dissolved trivalent REE, a simple protocol was followed. The REE tested in this study include some of the most prominent representatives, such as europium (Eu), samarium (Sm) and neodymium (Nd). Within the experiments, a fast decrease of the REE³⁺ concentration in solution was tracked by inductively coupled plasma mass spectrometry (ICP-MS). It revealed an almost complete (>99%) biosorption of REE³⁺ within the first hour after the addition of metal salts. REE³⁺ uptake by biomass was checked using laser-induced breakdown spectroscopy (LIBS) and showed that all three selected REE³⁺ species were enriched in the cyanobacterial biomass and the process is assigned to a biosorption process. Although the biomass stayed alive during the experiments, up to that, a distinction whether the REE³⁺ was intra- or extracellularly sorbed was not possible, since biosorption is a metabolism independent process which occurs on living as well as non-living biomass. For europium it was shown by TEM that electron dense particles, presumably europium particles with particle sizes of about 15 nm, are located inside the vegetative cyanobacterial cells. This gave clear evidence that Eu³⁺ was actively sorbed by living cyanobacteria. Eu³⁺ biosorption by cell wall precipitation due to interaction with extracellular polysaccharides (EPS) could therefore be excluded. Finally, with XRD analysis it was shown that the detected europium particles had an amorphous instead of a crystalline structure. Herein, we present a fast biosorptive enrichment of the rare earth elements europium, samarium and neodymium by Anabaena spec. and Anabaena cylindrica and for the first time the subsequent formation of intracellular europium particles by Anabaena spec.

Efficient biosorption and intracellular accumulation of selected rare earth elements from aqueous solutions by cyanobacteria type Anabaena.