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Fareed S, Haider A, Ramzan T, Ahmad M, Younis A, Zulfiqar U, Rehman HU, Waraich EA, Abbas A, Chaudhary T, Soufan W. Investigating the growth promotion potential of biochar on pea (Pisum sativum) plants under saline conditions. Sci Rep 2024; 14:10870. [PMID: 38740776 DOI: 10.1038/s41598-024-59891-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Accepted: 04/16/2024] [Indexed: 05/16/2024] Open
Abstract
Pea, member of the plant family Leguminosae, play a pivotal role in global food security as essential legumes. However, their production faces challenges stemming from the detrimental impacts of abiotic stressors, leading to a concerning decline in output. Salinity stress is one of the major factors that limiting the growth and productivity of pea. However, biochar amendment in soil has a potential role in alleviating the oxidative damage caused by salinity stress. The purpose of the study was to evaluate the potential role of biochar amendment in soil that may mitigate the adverse effect of salinity stress on pea. The treatments of this study were, (a) Pea varieties; (i) V1 = Meteor and V2 = Green Grass, Salinity Stress, (b) Control (0 mM) and (ii) Salinity (80 mM) (c) Biochar applications; (i) Control, (ii) 8 g/kg soil (56 g) and (iii) 16 g/kg soil (112 g). Salinity stress demonstrated a considerable reduction in morphological parameters as Shoot and root length decreased by (29% and 47%), fresh weight and dry weight of shoot and root by (85, 63%) and (49, 68%), as well as area of leaf reduced by (71%) among both varieties. Photosynthetic pigments (chlorophyll a, b, and carotenoid contents decreased under 80 mM salinity up to (41, 63, 55 and 76%) in both varieties as compared to control. Exposure of pea plants to salinity stress increased the oxidative damage by enhancing hydrogen peroxide and malondialdehyde content by (79 and 89%), while amendment of biochar reduced their activities as, (56% and 59%) in both varieties. The activities of catalase (CAT), superoxide dismutase (SOD), and peroxidase (POD) were increased by biochar applications under salinity stress as, (49, 59, and 86%) as well as non-enzymatic antioxidants as, anthocyanin and flavonoids improved by (112 and 67%). Organic osmolytes such as total soluble proteins, sugars, and glycine betaine were increased up to (57, 83, and 140%) by biochar amendment. Among uptake of mineral ions, shoot and root Na+ uptake was greater (144 and 73%) in saline-stressed plants as compared to control, while shoot and root Ca2+ and K+ were greater up to (175, 119%) and (77, 146%) in biochar-treated plants. Overall findings revealed that 16 g/kg soil (112 g) biochar was found to be effective in reducing salinity toxicity by causing reduction in reactive oxygen species and root and shoot Na+ ions uptake and improving growth, physiological and anti-oxidative activities in pea plants (Fig. 1). Figure 1 A schematic diagram represents two different mechanisms of pea under salinity stress (control and 80 mM NaCl) with Biochar (8 and 16 g/kg soil).
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Affiliation(s)
- Shahid Fareed
- Department of Botany, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Arslan Haider
- Department of Botany, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Tahrim Ramzan
- Department of Botany, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Muhammad Ahmad
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Aqsa Younis
- Department of Botany, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Usman Zulfiqar
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan.
| | - Hafeez Ur Rehman
- Department of Botany, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Ejaz Ahmad Waraich
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Adeel Abbas
- Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, Zhenjiang, China
| | - Talha Chaudhary
- Faculty of Agricultural and Environmental Sciences, Hungarian University of Agriculture and Life Sciences 2100, Godollo, Hungary.
| | - Walid Soufan
- Plant Production Department, College of Food and Agriculture Sciences, King Saud University, 11451, Riyadh, Saudi Arabia
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Choudhary N, Dhingra N, Gacem A, Yadav VK, Verma RK, Choudhary M, Bhardwaj U, Chundawat RS, Alqahtani MS, Gaur RK, Eltayeb LB, Al Abdulmonem W, Jeon BH. Towards further understanding the applications of endophytes: enriched source of bioactive compounds and bio factories for nanoparticles. FRONTIERS IN PLANT SCIENCE 2023; 14:1193573. [PMID: 37492778 PMCID: PMC10364642 DOI: 10.3389/fpls.2023.1193573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/25/2023] [Accepted: 05/31/2023] [Indexed: 07/27/2023]
Abstract
The most significant issues that humans face today include a growing population, an altering climate, an growing reliance on pesticides, the appearance of novel infectious agents, and an accumulation of industrial waste. The production of agricultural goods has also been subject to a great number of significant shifts, often known as agricultural revolutions, which have been influenced by the progression of civilization, technology, and general human advancement. Sustainable measures that can be applied in agriculture, the environment, medicine, and industry are needed to lessen the harmful effects of the aforementioned problems. Endophytes, which might be bacterial or fungal, could be a successful solution. They protect plants and promote growth by producing phytohormones and by providing biotic and abiotic stress tolerance. Endophytes produce the diverse type of bioactive compounds such as alkaloids, saponins, flavonoids, tannins, terpenoids, quinones, chinones, phenolic acids etc. and are known for various therapeutic advantages such as anticancer, antitumor, antidiabetic, antifungal, antiviral, antimicrobial, antimalarial, antioxidant activity. Proteases, pectinases, amylases, cellulases, xylanases, laccases, lipases, and other types of enzymes that are vital for many different industries can also be produced by endophytes. Due to the presence of all these bioactive compounds in endophytes, they have preferred sources for the green synthesis of nanoparticles. This review aims to comprehend the contributions and uses of endophytes in agriculture, medicinal, industrial sectors and bio-nanotechnology with their mechanism of action.
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Affiliation(s)
- Nisha Choudhary
- Dept of Biosciences, School of Liberal Arts and Sciences, Mody University of Science and Technology, Lakshmangarh, Sikar, Rajasthan, India
| | - Naveen Dhingra
- Department of Agriculture, Medi-Caps University, Pigdamber Road, Rau, Indore, Madhya Pradesh, India
| | - Amel Gacem
- Department of Physics, Faculty of Sciences, University 20 Août 1955, Skikda, Algeria
| | - Virendra Kumar Yadav
- Dept of Biosciences, School of Liberal Arts and Sciences, Mody University of Science and Technology, Lakshmangarh, Sikar, Rajasthan, India
- Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, India
| | - Rakesh Kumar Verma
- Dept of Biosciences, School of Liberal Arts and Sciences, Mody University of Science and Technology, Lakshmangarh, Sikar, Rajasthan, India
| | - Mahima Choudhary
- Dept of Biosciences, School of Liberal Arts and Sciences, Mody University of Science and Technology, Lakshmangarh, Sikar, Rajasthan, India
| | - Uma Bhardwaj
- Department of Biotechnology, Noida International University, Noida, U.P., India
| | - Rajendra Singh Chundawat
- Dept of Biosciences, School of Liberal Arts and Sciences, Mody University of Science and Technology, Lakshmangarh, Sikar, Rajasthan, India
| | - Mohammed S. Alqahtani
- Radiological Sciences Department, College of Applied Medical Sciences, King Khalid University, Abha, Saudi Arabia
- BioImaging Unit, Space Research Centre, University of Leicester, Leicester, United Kingdom
| | - Rajarshi Kumar Gaur
- Department of Biotechnology, Deen Dayal Upadhyaya (D.D.U.) Gorakhpur University, Gorakhpur, Uttar Pradesh, India
| | - Lienda Bashier Eltayeb
- Department of Medical Laboratory Sciences, College of Applied Medical Sciences, Prince Sattam Bin AbdulAziz University- Al-Kharj, Riyadh, Saudi Arabia
| | - Waleed Al Abdulmonem
- Department of Pathology, College of Medicine, Qassim University, Buraidah, Saudi Arabia
| | - Byong-Hun Jeon
- Department of Earth Resources and Environmental Engineering, Hanyang University, Seoul, Republic of Korea
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Ai M, Han F, Yang X, Chu H, Luo C, Tan S, Lv S, Qin M, Xie G. Endophytic Penicillium oxalicum CX-1 prevented Phytophthora cactorum blight on Salvia miltiorrhiza and promoted plant growth. J Appl Microbiol 2023; 134:6993072. [PMID: 36657387 DOI: 10.1093/jambio/lxad010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 01/07/2023] [Accepted: 01/18/2023] [Indexed: 01/20/2023]
Abstract
AIM The main purpose of this study was to study the preventive effect of Penicillium sp. CX-1 on Phytophthora cactorum causing Salvia miltiorrhiza blight and its positive effect on plant growth. METHODS AND RESULTS The endophytic strain CX-1 was isolated from the medicinal plant Corydalis saxicola Bunting and identified as Penicillium oxalicum. The growth inhibitory capacity of CX-1 against Ph. cactorum was 74.4% in the strain co-culture test and 86.2% in filtrate-modified plates. In the pot experiment, the in vivo control of CX-1 against Ph. cactorum in S. miltiorrhiza was 36.0%, which was higher than that of an anti-Phytophthora fungicide (23.4%). In addition, CX-1 had a potent ability to solubilize phosphate and also showed the ability to produce the plant hormone indole-3-acetic acid (IAA) and siderophores, which increase the bioavailability of iron to plants. It was demonstrated through pot experiments that CX-1 could significantly promote plant growth. As determined by real-time quantitative PCR, the expression of some S. miltiorrhiza tanshinone-related biosynthesis genes was significantly upregulated following colonization by CX-1. CONCLUSION Strain CX-1 could effectively inhibit Ph. cactorum, the causative agent of S. miltiorrhiza blight, and significantly promoted the growth of plants through several different routes.
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Affiliation(s)
- Mingkun Ai
- Department of Resources Science of Traditional Chinese Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China
| | - Feng Han
- Chongqing Institute of Medicinal Plant Cultivation, Chongqing 408435, China
| | - Xiangyi Yang
- Department of Resources Science of Traditional Chinese Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China
| | - Hongyi Chu
- Department of Resources Science of Traditional Chinese Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China
| | - Chuan Luo
- Chongqing Institute of Medicinal Plant Cultivation, Chongqing 408435, China
| | - Shixin Tan
- Department of Resources Science of Traditional Chinese Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China
| | - Sainan Lv
- Department of Resources Science of Traditional Chinese Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China
| | - Minjian Qin
- Department of Resources Science of Traditional Chinese Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China
| | - Guoyong Xie
- Department of Resources Science of Traditional Chinese Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China
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Alam H, Zamin M, Adnan M, Ahmad N, Nawaz T, Saud S, Basir A, Liu K, Harrison MT, Hassan S, Alharby HF, Alzahrani YM, Alghamdi SA, Majrashi A, Alharbi BM, Alabdallah NM, Fahad S. Evaluating the resistance mechanism of Atriplex leucoclada (Orache) to salt and water stress; A potential crop for biosaline agriculture. FRONTIERS IN PLANT SCIENCE 2022; 13:948736. [PMID: 35979075 PMCID: PMC9377539 DOI: 10.3389/fpls.2022.948736] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Accepted: 06/01/2022] [Indexed: 06/15/2023]
Abstract
The development of food and forage crops that flourish under saline conditions may be a prospective avenue for mitigating the impacts of climate change, both allowing biomass production under conditions of water-deficit and potentially expanding land-use to hitherto non-arable zones. Here, we examine responses of the native halophytic shrub Atriplex leucoclada to salt and drought stress using a factorial design, with four levels of salinity and four drought intensities under the arid conditions. A. leucoclada plants exhibited morphological and physiological adaptation to salt and water stress which had little effect on survival or growth. Under low salinity stress, water stress decreased the root length of A. leucoclada; in contrast, under highly saline conditions root length increased. Plant tissue total nitrogen, phosphorus and potassium content decreased with increasing water stress under low salinity. As salt stress increased, detrimental effects of water deficit diminished. We found that both salt and water stress had increased Na+ and Cl- uptake, with both stresses having an additive and beneficial role in increasing ABA and proline content. We conclude that A. leucoclada accumulates high salt concentrations in its cellular vacuoles as a salinity resistance mechanism; this salt accumulation then becomes conducive to mitigation of water stress. Application of these mechanisms to other crops may improve tolerance and producitivity under salt and water stress, potentially improving food security.
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Affiliation(s)
- Hasnain Alam
- Department of Biological Sciences, International Islamic University, Islamabad, Pakistan
- Department of Biology, College of Sciences, United Arab Emirates University, Al Ain, United Arab Emirates
| | - Muhammad Zamin
- Department of Agriculture, University of Swabi, Swabi, Pakistan
| | - Muhammad Adnan
- Department of Agriculture, University of Swabi, Swabi, Pakistan
| | - Nisar Ahmad
- Department of Biotechnology, University of Science and Technology, Bannu, Pakistan
| | - Taufiq Nawaz
- Department of Food Science and Technology, The University of Agriculture, Peshawar, Pakistan
| | - Shah Saud
- College of Life Science, Linyi University, Linyi, China
| | - Abdul Basir
- Department of Agriculture, University of Swabi, Swabi, Pakistan
| | - Ke Liu
- Tasmanian Institute of Agriculture, University of Tasmania, Burnie, TAS, Australia
| | - Matthew Tom Harrison
- Tasmanian Institute of Agriculture, University of Tasmania, Burnie, TAS, Australia
| | - Shah Hassan
- Department of Agricultural Extension Education & Communication, The University of Agriculture, Peshawar, Pakistan
| | - Hesham F. Alharby
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Yahya M. Alzahrani
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Sameera A. Alghamdi
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Ali Majrashi
- Department of Biology, College of Science, Taif University, Taif, Saudi Arabia
| | - Basmah M. Alharbi
- Department of Biology,, Faculty of Science, University of Tabuk, Tabuk, Saudi Arabia
| | - Nadiyah M. Alabdallah
- Department of Biology, College of Science, Imam Abdulrahman Bin Faisal University, Dammam, Saudi Arabia
| | - Shah Fahad
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, College of Tropical Crops, Hainan University, Haikou, China
- Department of Agronomy, The University of Haripur, Haripur, Pakistan
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5
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Song X, Li H, Song J, Chen W, Shi L. Biochar/vermicompost promotes Hybrid Pennisetum plant growth and soil enzyme activity in saline soils. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 183:96-110. [PMID: 35576892 DOI: 10.1016/j.plaphy.2022.05.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Revised: 04/23/2022] [Accepted: 05/07/2022] [Indexed: 06/15/2023]
Abstract
Soil salinity has become a major threat to land degradation worldwide. The application of organic amendments is a promising alternative to restore salt-degraded soils and alleviate the deleterious effects of soil salt ions on crop growth and productivity. The aim of present study was to explore the potential impact of biochar and vermicompost, applied individually or in combination, on soil enzyme activity and the growth, yield and quality of Hybrid Pennisetum plants suffered moderate salt stress (5.0 g kg-1 NaCl in the soil). Our results showed that biochar and/or vermicompost promoted Na+ exclusion and K+ accumulation, relieved stomatal limitation, increased leaf pigment contents, enhanced electron transport efficiency and net photosynthesis, improved root activity, and minimized the oxidative damage in Hybrid Pennisetum caused by soil salinity stress. In addition, soil enzymes were also activated by biochar and vermicompost. These amendments increased the biomass and crude protein content, and decreased the acid detergent fiber and neutral detergent fiber contents in salt-stressed Hybrid Pennisetum. Biochar and vermicompost addition increased the biomass and quality of Hybrid Pennisetum due to the direct effects related to plant growth parameters and the indirect effects via soil enzyme activity. Finally, among the different treatments, the use of vermicompost showed better results than biochar alone or the biochar-compost combination did, suggesting that the addition of vermicompost to the soil is an effective and valuable method for reclamation of salt-affected soils.
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Affiliation(s)
- Xiliang Song
- College of Resources and Environment, Shandong Agricultural University, Tai'an, 271018, People's Republic of China.
| | - Haibin Li
- College of Resources and Environment, Shandong Agricultural University, Tai'an, 271018, People's Republic of China
| | - Jiaxuan Song
- College of Resources and Environment, Shandong Agricultural University, Tai'an, 271018, People's Republic of China
| | - Weifeng Chen
- College of Resources and Environment, Shandong Agricultural University, Tai'an, 271018, People's Republic of China.
| | - Lianhui Shi
- College of Resources and Environment, Shandong Agricultural University, Tai'an, 271018, People's Republic of China.
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Alam H, Zamin M, Adnan M, Shah AN, Alharby HF, Bamagoos AA, Alabdallah NM, Alzahrani SS, Alharbi BM, Saud S, Hassan S, Fahad S. Exploring Suitability of Salsola imbricata (Fetid Saltwort) for Salinity and Drought Conditions: A Step Toward Sustainable Landscaping Under Changing Climate. FRONTIERS IN PLANT SCIENCE 2022; 13:900210. [PMID: 35755706 PMCID: PMC9213750 DOI: 10.3389/fpls.2022.900210] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2022] [Accepted: 05/04/2022] [Indexed: 06/15/2023]
Abstract
In context of the climate change, major abiotic stresses faced by plants include salt stress and drought stress. Though, plants have similar physiological mechanisms to cope with these salt and drought stresses. The physiological and biochemical response of native plants to the combined application of salinity and drought stresses are still not well-understood. Thus, to investigate the combined effect of salinity and drought stresses, an experiment was conducted on Salsola imbricata with four levels of salinity and four drought intensities under the arid climatic conditions. The experiment was conducted in a randomized complete block design with a split-plot arrangement replicated three times. S. imbricata had been found resistant to different levels of individual and combined salt and drought stresses. S. imbricata survived till the end of the experiment. Salt and water stress did not show any significant effects on shoot weight, shoot length, and root length. The drought stress affected the photosynthetic rate, ion uptake and leaf water potential. However, salt stress helped to counter this effect of drought stress. Thus, drought stress did not affect plant growth, photosynthesis rate, and ion uptake when combined with salt stress. Increased Na+ and Cl- uptake under the salt stress helped in osmotic adjustment. Therefore, the leaf water potential (LWP) decreased with increasing the salt stress from 5 dSm-1 until 15 dSm-1 and increased again at 20 dSm-1. At lower salt stress, ABA and proline content declined with increasing the drought stress. However, at higher salt stress, ABA content increased with increasing the drought stress. In conclusion, the salt stress had been found to have a protective role to drought stress for S. imbricata. S. imbricata utilized inorganic ion for osmotic adjustment at lower salinity stress but also accumulate the organic solutes to balance the osmotic pressure of the ions in the vacuole under combined stress conditions. Due to the physical lush green appearance and less maintenance requirements, S. imbricata can be recommended as a native substitute in landscaping under the salt and drought stresses conditions.
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Affiliation(s)
- Hasnain Alam
- Department of Biological Sciences, International Islamic University, Islamabad, Pakistan
- Department of Biology, College of Sciences, United Arab Emirates University, Al Ain, United Arab Emirates
| | - Muhammad Zamin
- Department of Agriculture, University of Swabi, Swabi, Pakistan
| | - Muhammad Adnan
- Department of Agriculture, University of Swabi, Swabi, Pakistan
| | - Adnan Noor Shah
- Department of Agricultural Engineering, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan, Pakistan
| | - Hesham F. Alharby
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Atif A. Bamagoos
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Nadiyah M. Alabdallah
- Department of Biology, College of Science, Imam Abdulrahman Bin Faisal University, Dammam, Saudi Arabia
| | - Saleha S. Alzahrani
- Department of Biology, College of Science, Imam Abdulrahman Bin Faisal University, Dammam, Saudi Arabia
| | - Basmah M. Alharbi
- Biology Department, Faculty of Science, University of Tabuk, Tabuk, Saudi Arabia
| | - Shah Saud
- College of Life Science, Linyi University, Linyi, China
| | - Shah Hassan
- Department of Agricultural Extension Education and Communication, The University of Agriculture, Peshawar, Pakistan
| | - Shah Fahad
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, College of Tropical Crops, Hainan University, Haikou, China
- Department of Agronomy, The University of Haripur, Haripur, Pakistan
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7
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Gladkov EA, Gladkova OV. Ornamental plants adapted to urban ecosystem pollution: lawn grasses tolerating deicing reagents. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:22947-22951. [PMID: 34508315 DOI: 10.1007/s11356-021-16355-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 09/01/2021] [Indexed: 06/13/2023]
Abstract
Deicing reagents are priority soil pollutants in urban ecosystems. Sodium chloride is one of the priority deicing reagents. Sodium chloride is limiting the spread of lawn grass. We first showed the possibility of using environmental biotechnology in urban greening to obtain lawn grasses tolerant of sodium chloride. We have developed a cell selection technology to obtain salt-tolerant lawn grasses. A cell selection scheme with 1% sodium chloride was used. Most of the tested regenerants were more tolerant to NaCl than original plants. The descendants of the studied regenerants demonstrated the preservation of salt resistance. Most of the descendants of the regenerants Agrostis stolonifera retained high decorative qualities under salinity conditions. The tolerance remained in the next five generations. The descendants of the most salt-tolerant clones Agrostis stolonifera demonstrated resistance to 1% sodium chloride concentration in soil. These plants can serve as the basis for the creation of new salt-tolerant varieties.
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Unraveling the Genome Sequence of Plant Growth Promoting Aspergillus niger (CSR3) Provides Insight into the Synthesis of Secondary Metabolites and Its Comparative Genomics. J Fungi (Basel) 2022; 8:jof8020107. [PMID: 35205861 PMCID: PMC8877640 DOI: 10.3390/jof8020107] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Revised: 12/30/2021] [Accepted: 01/20/2022] [Indexed: 12/20/2022] Open
Abstract
Aspergillus niger strain CSR3 is an endophytic fungus that regulates plant endogenous hormones, secondary metabolites, and promotes plant growth during abiotic stress conditions. In this study, we sequenced the genome of A. niger (CSR3) and compared it with previously available A. niger strains. The final genome assembly was 35.8 Mb in size, consisting of 23 scaffolds with N50 scaffold length of 2.4 Mb. A total of 12,442 protein coding genes, 270 tRNA, and 57 rRNA were predicted in the CSR3 genome. We used comparative genomic analysis to provide insights into the genome’s evolution and to elucidate the adaptive genomic signatures for bioactive secondary metabolite biosynthesis, hormones biosynthesis, and plant growth promoting activities. We also analyzed the transposable elements (TEs), simple sequence repeats (SSRs), CAZymes families, genes involved in gibberellin biosynthesis, and secondary metabolite clusters in the CSR3 genome. A total of 21 secondary metabolite biosynthesis gene clusters were detected, with 18 essential enzymes involved in the mevalonate pathway (MVA). The repeat analysis revealed about 3431 SSR, 274 TEs, and 205 inverted repeats (IR). Further gene family analysis revealed that 124 gene families were gained, whereas 125 gene families were lost in CSR3 genome, compared to A. niger ASM151534V and A. niger ASM285V2 genomes. The results improve our understanding of the CSR3 genome and will assist in future investigations on the genetic basis of A. niger CSR3, including the identification of CSR3 phytostimulant properties.
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El Nahhas N, AlKahtani MDF, Abdelaal KAA, Al Husnain L, AlGwaiz HIM, Hafez YM, Attia KA, El-Esawi MA, Ibrahim MFM, Elkelish A. Biochar and jasmonic acid application attenuates antioxidative systems and improves growth, physiology, nutrient uptake and productivity of faba bean (Vicia faba L.) irrigated with saline water. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 166:807-817. [PMID: 34225005 DOI: 10.1016/j.plaphy.2021.06.033] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Accepted: 06/18/2021] [Indexed: 05/10/2023]
Abstract
The effect of foliar treatment with jasmonic acid at 0.5 mM (JA) and biochar (15 ton ha-1) as a soil amendment for the faba bean (Vicia faba L. Sakha 4) was studied under salinity conditions. Salt stress led to a significant decrease in leaf numbers, leaf areas and plants, chlorophyll content, relative water content, and yield parameters. In contrast, reactive oxygen species, the proline concentration, level of malondialdehyde, and amount of electrolyte leakage were noticeably increased during both seasons under salt levels of 1500 and 3000 ppm sodium chloride (NaCl). Also, enzyme activities (i.e., of superoxide dismutase, catalase, peroxidase, and glutathione reductase) were increased, especially under a high level of salinity stress (3000 ppm). Application of biochar, jasmonic acid, or biochar + jasmonic acid significantly reduced the catalase, superoxide dismutase, and glutathione reductase activities in salt-stressed plants to values approaching those of the control (unstressed) plants, especially under 1500 ppm of NaCl stress. Biochar and jasmonic acid treatments mitigated the damaging effects of salinity and improved the plant status as indicated by the plant height, leaf area, relative water content, and chlorophyll a and b concentrations. Moreover, biochar and jasmonic acid treatments of the salt-stressed plants enhanced plant productivity, number of flowers, number of seeds per plant, and weight of 100 seeds during two successive seasons. Overall, this study suggests that biochar or jasmonic acid treatments might be promising for mitigating the detrimental impact of salt stress on faba beans.
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Affiliation(s)
- Nihal El Nahhas
- Department of Botany and Microbiology, Faculty of Science, Alexandria University, Alexandria, Egypt.
| | - Muneera D F AlKahtani
- Biology Department, College of Science, Princess Nourah Bint Abdulrahman University, P.O. Box 102275, Riyadh, 11675, Saudi Arabia.
| | - Khaled A A Abdelaal
- EPCRS Excellence Center, Plant Pathology and Biotechnology Lab., Faculty of Agriculture, Kafrelsheikh Univ., 33516, Egypt.
| | - Latifa Al Husnain
- Biology Department, College of Science, Princess Nourah Bint Abdulrahman University, P.O. Box 102275, Riyadh, 11675, Saudi Arabia.
| | - Hussah I M AlGwaiz
- Biology Department, College of Science, Princess Nourah Bint Abdulrahman University, P.O. Box 102275, Riyadh, 11675, Saudi Arabia
| | - Yaser M Hafez
- EPCRS Excellence Center, Plant Pathology and Biotechnology Lab., Faculty of Agriculture, Kafrelsheikh Univ., 33516, Egypt.
| | - Kotb A Attia
- Center of Excellence in Biotechnology Research, King Saud University, Riyadh, POX 2455-11451, Saudi Arabia; Rice Biotechnology Lab, Rice Research & Training Center, Field Crops Research Institute, Sakha, Kafr El-Sheikh, 33717, Egypt.
| | - Mohamed A El-Esawi
- Botany Department, Faculty of Science, Tanta University, Tanta, 31527, Egypt.
| | - Mohamed F M Ibrahim
- Department of Agricultural Botany, Faculty of Agriculture, Ain Shams University, Cairo, 11566, Egypt.
| | - Amr Elkelish
- Botany Department, Faculty of Science, Suez Canal University, Ismailia, 41522, Egypt.
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Beneficial Features of Biochar and Arbuscular Mycorrhiza for Improving Spinach Plant Growth, Root Morphological Traits, Physiological Properties, and Soil Enzymatic Activities. J Fungi (Basel) 2021; 7:jof7070571. [PMID: 34356950 PMCID: PMC8307178 DOI: 10.3390/jof7070571] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 07/12/2021] [Accepted: 07/14/2021] [Indexed: 02/04/2023] Open
Abstract
Biochar and arbuscular mycorrhizal fungi (AMF) can promote plant growth, improve soil properties, and maintain microbial activity. The effects of biochar and AMF on plant growth, root morphological traits, physiological properties, and soil enzymatic activities were studied in spinach (Spinacia oleracea L.). A pot experiment was conducted to evaluate the effect of biochar and AMF on the growth of spinach. Four treatments, a T1 control (soil without biochar), T2 biochar alone, T3 AMF alone, and T4 biochar and AMF together, were arranged in a randomized complete block design with five replications. The biochar alone had a positive effect on the growth of spinach, root morphological traits, physiological properties, and soil enzymatic activities. It significantly increased the plant growth parameters, such as the shoot length, leaf number, leaf length, leaf width, shoot fresh weight, and shoot dry weight. The root morphological traits, plant physiological attributes, and soil enzymatic activities were significantly enhanced with the biochar alone compared with the control. However, the combination of biochar and AMF had a greater impact on the increase in plant growth, root morphological traits, physiological properties, and soil enzymatic activities compared with the other treatments. The results suggested that the combined biochar and AMF led to the highest levels of spinach plant growth, microbial biomass, and soil enzymatic activity.
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11
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Isolation and Characterization of Fungal Endophytes Isolated from Medicinal Plant Ephedra pachyclada as Plant Growth-Promoting. Biomolecules 2021; 11:biom11020140. [PMID: 33499067 PMCID: PMC7911138 DOI: 10.3390/biom11020140] [Citation(s) in RCA: 56] [Impact Index Per Article: 18.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2020] [Revised: 01/18/2021] [Accepted: 01/19/2021] [Indexed: 12/17/2022] Open
Abstract
Endophytic fungi are widely present in internal plant tissues and provide different benefits to their host. Medicinal plants have unexplored diversity of functional fungal association; therefore, this study aimed to isolate endophytic fungi associated with leaves of medicinal plants Ephedra pachyclada and evaluate their plant growth-promoting properties. Fifteen isolated fungal endophytes belonging to Ascomycota, with three different genera, Penicillium, Alternaria, and Aspergillus, were obtained from healthy leaves of E. pachyclada. These fungal endophytes have varied antimicrobial activity against human pathogenic microbes and produce ammonia and indole acetic acid (IAA), in addition to their enzymatic activity. The results showed that Penicillium commune EP-5 had a maximum IAA productivity of 192.1 ± 4.04 µg mL−1 in the presence of 5 µg mL−1 tryptophan. The fungal isolates of Penicillium crustosum EP-2, Penicillium chrysogenum EP-3, and Aspergillus flavus EP-14 exhibited variable efficiency for solubilizing phosphate salts. Five representative fungal endophytes of Penicillium crustosum EP-2, Penicillium commune EP-5, Penicillium caseifulvum EP-11, Alternaria tenuissima EP-13, and Aspergillus flavus EP-14 and their consortium were selected and applied as bioinoculant to maize plants. The results showed that Penicillium commune EP-5 increased root lengths from 15.8 ± 0.8 to 22.1 ± 0.6. Moreover, the vegetative growth features of inoculated maize plants improved more than the uninoculated ones.
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12
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Mohamed E, Kasem AMMA, Gobouri AA, Elkelish A, Azab E. Influence of Maternal Habitat on Salt Tolerance During Germination and Growth in Zygophyllum coccineum. PLANTS 2020; 9:plants9111504. [PMID: 33172127 PMCID: PMC7694771 DOI: 10.3390/plants9111504] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 11/02/2020] [Accepted: 11/03/2020] [Indexed: 12/21/2022]
Abstract
Zygophyllum coccineum is a facultative halophyte widely distributed in desert wadis and coastal areas in Egypt. Here, we investigated the influences of maternal habitat on tolerance to salt stress during germination and seedling growth under salinity (0, 100, 200, 400 mM NaCl) of three populations of Z. coccineum from a saline habitat (Manzala coast) and non-saline habitats (Wadi Houf and Wadi Asyuti). In all populations, seed germination started within two days in distilled water but germination indices were reduced significantly with salt level increase. Germination percentage was not significantly greater for seeds from non-saline habitats than for those from the saline habitat under moderate salinity (100, 200 mM NaCl), but only seeds from the saline habitat were able to germinate under high salt stress (400 mM NaCl). Germination recovery was greater for seeds from the saline habitat compared to non-saline populations. At the seedling level, the Manzala population showed the lowest inhibition of shoot length and leaf area under salinity (200 and 400 mM NaCl) compared to non-saline habitats. In the same context, the Manzala population had the maximum chlorophyll a content, superoxide dismutase and esterase activities under salinity compared to non-saline populations, but salinity had a non-significant effect on chlorophyll b between the three populations. Carotenoids were enhanced with the increase of salt levels in all populations. These results suggest the salt tolerance of Manzala population is derived from maternal salinity and adaptive plasticity of this species may play an important role in the wide distribution of Z. coccineum.
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Affiliation(s)
- Elsayed Mohamed
- Botany & Microbiology Department, Faculty of Science (Assiut), Al-Azhar University, Assiut 71524, Egypt;
- Correspondence: ; Tel.: +20-100-854-7019
| | - Ahmed M. M. A. Kasem
- Botany & Microbiology Department, Faculty of Science (Assiut), Al-Azhar University, Assiut 71524, Egypt;
| | - Adil A. Gobouri
- Department of Chemistry, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia;
| | - Amr Elkelish
- Botany Department, Faculty of Science, Suez Canal University Ismailia, Ismailia 41522, Egypt;
| | - Ehab Azab
- Department of Biotechnology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia;
- Botany and Microbiology Department, Faculty of Science, Zagazig University, Zagazig, 44519, Egypt
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Shahid M, Nadeem M, Bakhat HF. Environmental toxicology and associated human health risks. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:39671-39675. [PMID: 32840748 DOI: 10.1007/s11356-020-10516-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Affiliation(s)
- Muhammad Shahid
- Department of Environmental Sciences, COMSATS University Islamabad, Vehari Campus, Vehari, 61100, Pakistan.
| | - Muhammad Nadeem
- Department of Environmental Sciences, COMSATS University Islamabad, Vehari Campus, Vehari, 61100, Pakistan
| | - Hafiz Faiq Bakhat
- Department of Environmental Sciences, COMSATS University Islamabad, Vehari Campus, Vehari, 61100, Pakistan
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14
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Hashim AM, Alharbi BM, Abdulmajeed AM, Elkelish A, Hozzein WN, Hassan HM. Oxidative Stress Responses of Some Endemic Plants to High Altitudes by Intensifying Antioxidants and Secondary Metabolites Content. PLANTS 2020; 9:plants9070869. [PMID: 32659963 PMCID: PMC7412441 DOI: 10.3390/plants9070869] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/21/2020] [Revised: 06/27/2020] [Accepted: 06/29/2020] [Indexed: 01/12/2023]
Abstract
Most endemic plant species have limited altitudinal ranges. At higher altitudes, they are subjected to various environmental stresses. However, these plants use unique defense mechanisms at high altitudes as a convenient survival strategy. The changes in antioxidant defense system and accumulation of different secondary metabolites (SMs) were investigated as depending on altitude in five endemic endangered species (Nepeta septemcrenata, Origanum syriacum subsp. Sinaicum, Phlomis aurea, Rosa arabica, and Silene schimperiana) naturally growing in Saint Katherine protectorate (SKP). Leaves were collected from different sites between 1600 and 2200 m above sea level to assess the biochemical and physiological variations in response to high altitudes. At higher altitudes, the soil pH and micronutrient soil content decreased, which can be attributed to lower mineralization processes at lower pH. Total phenols, ascorbic acid, proline, flavonoids, and tannins increased in response to different altitudes. SMs progressively increased in the studied species, associated with a significant decrease in the levels of antioxidant enzyme activity. R. arabica, as the most threatened plant, showed the maximum response compared with other species. There was an increase in photosynthetic pigments, which was attained via the increase in chlorophyll a, chlorophyll b, and carotenoid contents. There was a significant increase in total soluble sugars and total soluble protein content in response to different altitudes. SDS-PAGE of leaf proteins showed alteration in the protein profile between different species and the same species grown at a different altitude. These five species can adapt to high-altitude habitats by various physiological mechanisms, which can provide a theoretical basis for the future conservation of these endangered endemic species in SKP.
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Affiliation(s)
- Ahmed M. Hashim
- Botany Department, Faculty of Science, Ain Shams University, Cairo 11865, Egypt; (A.M.H.)
| | - Basmah M. Alharbi
- Biology Department, Faculty of Science, Tabuk University, Tabuk 71421, Saudi Arabia;
| | | | - Amr Elkelish
- Botany Department, Faculty of Science, Suez Canal University, Ismailia 41522, Egypt;
| | - Wael N. Hozzein
- Bioproducts Research Chair, Zoology Department, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
- Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef 62511, Egypt
- Correspondence: ; Tel.: +20-1024824643
| | - Heba M. Hassan
- Botany Department, Faculty of Science, Ain Shams University, Cairo 11865, Egypt; (A.M.H.)
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