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Du S, Xu L, Jiang C, Xiao Y. Novel strategy to understand the bacteria-enzyme synergy action regulates the ensiling performance of wheat straw silage by multi-omics analysis. Int J Biol Macromol 2025; 289:138864. [PMID: 39694364 DOI: 10.1016/j.ijbiomac.2024.138864] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 11/12/2024] [Accepted: 12/15/2024] [Indexed: 12/20/2024]
Abstract
BACKGROUND Ensiling technology shows promise for preserving and providing high-quality forage. However, the high polymeric content and compact properties of fiber result in low biodigestibility. This study aimed to evaluate the use of ensiling technology for storing wheat straw. It also analyzed changes in fermentation-related products, chemical components, bacterial communities, and metabolite profiles of wheat straw ensiled with or without cellulase or Lactiplantibacillus plantarum (L. plantarum). RESULTS The results showed that inoculation with L. plantarum, either alone or with cellulase, produced abundant organic acids, degraded fiber, suppressed most microbes, and increased certain metabolites in wheat straw silage. Wheat straw inoculated with L. plantarum, either alone or with cellulase, exhibited significantly lower neutral detergent fiber and acid detergent fiber contents compared to the control treatment. Additionally, higher lactic acid and acetic acid contents were observed in these treatments. The microbiome analysis revealed that Lactobacillus was dominant, while Kosakonia was suppressed. Metabolic analysis showed a significant increase in amino acids, peptides, analogues, and organic acid derivatives. CONCLUSIONS Overall, wheat straw inoculated with L. plantarum, either alone or with cellulase, produced well-preserved silage, providing new insights into recycling and utilizing wheat straw through bacterial-enzyme synergy.
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Affiliation(s)
- Shuai Du
- Key Laboratory of Forage Cultivation, Processing and High Efficient Utilization, Ministry of Agriculture, College of Grassland, Resources and Environment, Inner Mongolia Agricultural University, Hohhot, Inner Mongolia, China.
| | - Lijun Xu
- Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Science, Hulunber Grassland Ecosystem Observation and Research Station, Beijing, China
| | - Chao Jiang
- Grass Industry Collaborative Innovation Research Center, Hulunbuir University, Hulunber, China
| | - Yanzi Xiao
- Grass Industry Collaborative Innovation Research Center, Hulunbuir University, Hulunber, China.
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Wang Z, Tang H, Li Y, Tian L, Ye B, Yan W, Liu G, Yang Y. Evaluating the dynamic effects of complex probiotics as cellulase replacements during fermentation of apple pomace. Int J Food Microbiol 2024; 425:110896. [PMID: 39226861 DOI: 10.1016/j.ijfoodmicro.2024.110896] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Revised: 08/17/2024] [Accepted: 08/28/2024] [Indexed: 09/05/2024]
Abstract
Apple pomace, an abundant agricultural by-product with low utilization rates, often leads to environmental pollution if not properly managed. This study aimed to enhance the nutritional value of apple pomace by comparing the effects of solid-state fermentation using complex probiotics and cellulase preparation. Additionally, the study investigated the dynamic changes in various components throughout the fermentation process with complex probiotics. The results of single-strain solid-state fermentation tests indicated that Lactiplantibacillus plantarum DPH, Saccharomyces cerevisiae SC9, and Bacillus subtilis C9 were the optimal strains for fermenting the most effective substrate combination, comprising 73 % apple pomace and 20 % millet bran. The strains (complex probiotics) and a cellulase preparation were used for the solid-state fermentation of the apple pomace mixture for nine days, respectively. The contents of acid detergent fiber, neutral detergent fiber, hemicellulose, and insoluble dietary fiber decreased by up to 9.99 %, 9.59 %, 23.21 %, and 14.34 %, respectively. In contrast, the content of soluble dietary fiber significantly increased by up to 29.74 %. Both methods reduced cellulose crystallinity and modified the substrate's surface structure, resulting in a looser arrangement. Fermentation with complex probiotics for three or six days increased the abundance of lactic acid bacteria, which comprised >87 % of the total microbial population. Concurrently, the abundance of detrimental bacteria, such as Salmonella, Acetobacter, Escherichia, and Pantoea, significantly decreased. Furthermore, fermentation with complex probiotics for six or nine days enhanced antioxidant properties, leading to a significant increase in beneficial metabolites, including amino acids, organic acids, gamma-aminobutyric acid, serotonin. In conclusion, complex probiotics can effectively substitute for cellulase preparation in the solid-state fermentation of apple pomace, with a six-day fermentation period yielding optimal results. This study provides valuable insights into enhancing the value of apple pomace in the feed industry and the effective application of agro-industrial by-products.
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Affiliation(s)
- Zhiwei Wang
- College of Animal Science and Technology, Northwest A&F University, Yangling, China
| | - Haoran Tang
- College of Animal Science and Technology, Northwest A&F University, Yangling, China
| | - Yangguang Li
- College of Animal Science and Technology, Northwest A&F University, Yangling, China
| | - Lichan Tian
- College of Animal Science and Technology, Northwest A&F University, Yangling, China
| | - Bingkui Ye
- Shaanxi Yangling First Biological Technology Co., Ltd, Yangling, China
| | - Weijie Yan
- Gansu Yasheng Benyuan Biotechnology Co., Ltd, Lanzhou, China
| | - Gongwei Liu
- College of Animal Science and Technology, Northwest A&F University, Yangling, China
| | - Yuxin Yang
- College of Animal Science and Technology, Northwest A&F University, Yangling, China.
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He D, Zhang Y, Liu J, Wang X, Hu Y, Xu W, Chen W, Fan Z, Wang Z. Changes in metabolite profiles in solid fermentation of glutamate waste treatment solution by Aspergillus niger and Candida tropicalis. J Appl Microbiol 2024; 135:lxae304. [PMID: 39701822 DOI: 10.1093/jambio/lxae304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2024] [Revised: 12/05/2024] [Accepted: 12/17/2024] [Indexed: 12/21/2024]
Abstract
AIMS Glutamate wastewater poses a great environmental challenge to the monosodium glutamate production industry. However, its treatment solution is rich in crude protein, which has the potential to be developed as a new protein source for animal feed. METHODS AND RESULTS Given that the fermentation process generates functionally different metabolites, this study innovatively utilized two strains of feed microorganisms, Aspergillus niger and Candida tropicalis, to perform solid-state fermentation of glutamate wastewater treatment solution. The aim was to investigate and analyse the metabolite profiles during fermentation. The significant differences in metabolite profiles between the samples were determined using correlation analysis, principal component analysis, orthogonal partial least-squares discriminant analysis, variable importance in projection analysis, Kyoto Encyclopaedia of Genomes, and Human Metabolome Data Bank analysis. These variations were mainly manifested in essential feed components, such as amino acids, peptides, and their analogues. These included Ile-Pro-Asn, Pro-Gly-Val, alanylvaline, histidylisoleucine, Lys-Leu-Tyr, Ile-Arg, glycyl-leucine, leucyl-lysine, N-palmitoyl histidine, alanylisoleucine, l-glutamate, N-methylisoleucine, Isoleucylproline, dl-m-tyrosine, Isoleucyl-threonine, phenylalanine amide, carboxyethyllysine, N6-acetyl-l-lysine, citrulline, N-alpha-acetyl-l-lysine, N(6)-methyllysine, and l-aspartate-semialdehyde. CONCLUSIONS This study investigates the metabolite profiles of glutamate wastewater treatment solutions after co-fermentation with A. niger and C. tropicalis using solid-state fermentation. These findings provide a new strategy for efficiently utilizing glutamate wastewater treatment solutions.
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Affiliation(s)
- Dan He
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Ying Zhang
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Jinxu Liu
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Xiao Wang
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Yunlong Hu
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Weihui Xu
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Wenjing Chen
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Zhenyu Fan
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
| | - Zhigang Wang
- College of Life Science and Agroforestry, Qiqihar University, Qiqihar, Heilongjiang, 161006, China
- Heilongjiang Provincial Technology Innovation Center of Agromicrobial Preparation Industrialization, Qiqihar, 161006, China
- Heilongjiang Provincial Collaborative Innovation Center of Agrobiological Preparation Industrialization, Qiqihar, 161006, China
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He J, Tang M, Zhong F, Deng J, Li W, Zhang L, Lin Q, Xia X, Li J, Guo T. Current trends and possibilities of typical microbial protein production approaches: a review. Crit Rev Biotechnol 2024; 44:1515-1532. [PMID: 38566484 DOI: 10.1080/07388551.2024.2332927] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Revised: 12/07/2023] [Accepted: 01/17/2024] [Indexed: 04/04/2024]
Abstract
Global population growth and demographic restructuring are driving the food and agriculture sectors to provide greater quantities and varieties of food, of which protein resources are particularly important. Traditional animal-source proteins are becoming increasingly difficult to meet the demand of the current consumer market, and the search for alternative protein sources is urgent. Microbial proteins are biomass obtained from nonpathogenic single-celled organisms, such as bacteria, fungi, and microalgae. They contain large amounts of proteins and essential amino acids as well as a variety of other nutritive substances, which are considered to be promising sustainable alternatives to traditional proteins. In this review, typical approaches to microbial protein synthesis processes were highlighted and the characteristics and applications of different types of microbial proteins were described. Bacteria, fungi, and microalgae can be individually or co-cultured to obtain protein-rich biomass using starch-based raw materials, organic wastes, and one-carbon compounds as fermentation substrates. Microbial proteins have been gradually used in practical applications as foods, nutritional supplements, flavor modifiers, and animal feeds. However, further development and application of microbial proteins require more advanced biotechnological support, screening of good strains, and safety considerations. This review contributes to accelerating the practical application of microbial proteins as a promising alternative protein resource and provides a sustainable solution to the food crisis facing the world.
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Affiliation(s)
- JinTao He
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Min Tang
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
| | - FeiFei Zhong
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
- Changsha Institute for Food and Drug Control, Changsha, China
| | - Jing Deng
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Wen Li
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
- Hunan Provincial Engineering Technology Research Center of Seasonings Green Manufacturing, Changsha, China
- College of Food Science and Engineering, Nanjing University of Finance and Economics/Collaborative Innovation Center for Modern Grain Circulation and Safety, Nanjing, China
| | - Lin Zhang
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
| | - QinLu Lin
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
- Hunan Provincial Engineering Technology Research Center of Seasonings Green Manufacturing, Changsha, China
- College of Food Science and Engineering, Nanjing University of Finance and Economics/Collaborative Innovation Center for Modern Grain Circulation and Safety, Nanjing, China
| | - Xu Xia
- Huaihua Academy of Agricultural Sciences, Huaihua, China
| | - Juan Li
- Hunan Province Key Laboratory of Edible Forestry Resources Safety and Processing Utilization, National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Ting Guo
- Jiangsu Academy of Agricultural Sciences, Nanjing, China
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Dygas D, Kręgiel D, Berłowska J. Sugar Beet Pulp as a Biorefinery Substrate for Designing Feed. Molecules 2023; 28:2064. [PMID: 36903310 PMCID: PMC10004680 DOI: 10.3390/molecules28052064] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Revised: 02/20/2023] [Accepted: 02/20/2023] [Indexed: 02/25/2023] Open
Abstract
An example of the implementation of the principles of the circular economy is the use of sugar beet pulp as animal feed. Here, we investigate the possible use of yeast strains to enrich waste biomass in single-cell protein (SCP). The strains were evaluated for yeast growth (pour plate method), protein increment (Kjeldahl method), assimilation of free amino nitrogen (FAN), and reduction of crude fiber content. All the tested strains were able to grow on hydrolyzed sugar beet pulp-based medium. The greatest increases in protein content were observed for Candida utilis LOCK0021 and Saccharomyces cerevisiae Ethanol Red (ΔN = 2.33%) on fresh sugar beet pulp, and for Scheffersomyces stipitis NCYC1541 (ΔN = 3.04%) on dried sugar beet pulp. All the strains assimilated FAN from the culture medium. The largest reductions in the crude fiber content of the biomass were recorded for Saccharomyces cerevisiae Ethanol Red (Δ = 10.89%) on fresh sugar beet pulp and Candida utilis LOCK0021 (Δ = 15.05%) on dried sugar beet pulp. The results show that sugar beet pulp provides an excellent matrix for SCP and feed production.
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Affiliation(s)
- Dawid Dygas
- Department of Environmental Biotechnology, Lodz University of Technology, 171/173 Wólczańska Street, 90-530 Łódź, Poland
| | - Dorota Kręgiel
- Department of Environmental Biotechnology, Lodz University of Technology, 171/173 Wólczańska Street, 90-530 Łódź, Poland
| | - Joanna Berłowska
- Department of Environmental Biotechnology, Lodz University of Technology, 171/173 Wólczańska Street, 90-530 Łódź, Poland
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Biowaste upcycling into second-generation microbial protein through mixed-culture fermentation. Trends Biotechnol 2023; 41:197-213. [PMID: 35989113 DOI: 10.1016/j.tibtech.2022.07.008] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Revised: 07/19/2022] [Accepted: 07/22/2022] [Indexed: 01/24/2023]
Abstract
Securing a sustainable protein supply at the global level is among the greatest challenges currently faced by humanity. Alternative protein sources, such as second-generation microbial protein (MP), could give rise to innovative circular bioeconomy practices, synthesizing high-value bioproducts through the recovery and upcycling of resources from overabundant biowastes and residues. Within such a multi-feedstock biorefinery scenario, the wide range of microbial pathways and networks that characterize mixed microbial cultures, offers interesting and not yet fully explored advantages over conventional monoculture-based processes. In this review, we combine a comprehensive analysis of waste recovery platforms for second-generation MP production with a critical evaluation of the research gaps and potentials offered by mixed culture-based MP fermentation processes.
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