Scientists' warning to humanity on the freshwater biodiversity crisis

Grasping at water: a gap-oriented approach to bridging shortfalls in freshwater biodiversity conservation

Freshwater biodiversity is the fastest declining part of the global biota, threatened by multiple stressors including habitat loss and fragmentation, climate change, invasive species, water pollution, and abstraction by humans. A multitude of recent agenda-setting publications have pointed out key objectives and goals for addressing this freshwater biodiversity crisis, but important gaps must be overcome to reach ambitious conservation targets. In this perspective, we complement these high-level papers in freshwater conservation by highlighting important gaps in knowledge, governance, and implementation. This gap-oriented approach is designed to facilitate meaningful action by highlighting missing 'pieces' in the conservation process, and their connection to existing and emerging solutions in the literature. We derive 13 overarching gaps from a conference session and informal synthesis of recent literature in freshwater biodiversity conservation to catalyse research, advocacy, and action to meet freshwater goals for the post-2020 Kunming-Montreal Global Biodiversity Framework (GBF). Key gaps include inventory data on global freshwater biodiversity, collating and mobilizing conservation evidence in practice, improving coordination of ecological governance at scale -including within and across catchments-and navigating trade-offs between economic development, resource consumption, and priorities for freshwater biodiversity. Finally, we apply this gap-oriented approach to key language describing GBF goals for freshwater biodiversity conservation, and point out existing and emerging solutions which may help address important gaps. Major themes that address multiple gaps include the use of Nature-based Solutions and Other Effective Area-based Conservation Measures (OECMs), navigation of water management trade-offs between human and environmental needs, co-production of knowledge with Indigenous and local people and other stakeholders, integration of conservation research and action between aquatic and terrestrial ecosystems, and funding and policy mechanisms to facilitate conservation action and support meaningful monitoring of conservation evidence across hydrological scales.

Data-driven identification of pollution sources and water quality prediction using Apriori and LSTM models: A case study in the Hanjiang River basin

The rapid development of urbanization and industrialization has exacerbated surface water pollution, especially from point sources such as industrial discharge and urban wastewater, posing a severe challenge to global environmental health and sustainable development. This study combines the Apriori algorithm and Long Short-Term Memory (LSTM) networks to identify major pollution sources and predict dynamic changes in water quality. The study area encompasses four national monitoring hydrological stations in the core area of the South-to-North Water Diversion Project, with multi-source data collected, including water quality parameters and industry-specific discharge data. Using the Apriori algorithm, the pollutants with the highest support-chemical oxygen demand (COD), copper (Cu), suspended solids (SS), and zinc (Zn)-demonstrated a support value of 0.87, indicating that the metallurgical, electroplating, and chemical industries are the primary pollution sources. Further association rule analysis based on varying parameter thresholds revealed that when COD is present, the co-occurrence confidence for Cadmium (Cd), Cu, Lead (Pb), and SS reaches 0.9, and the combination of COD, Cu, Pb, SS, and Cyanide (CN) achieves a confidence level of 1, indicating a high degree of correlation among these pollutants. The LSTM model demonstrated high accuracy in water quality prediction, with Root Mean Square Error (RMSE) values for COD predictions at each hydrological station ranging from 0.2076 to 0.3366, and coefficients of determination (R2) all exceeding 0.9, highlighting the model's stability and predictive accuracy. This study provides a scientific basis for the sustainable management of watershed water resources and serves as a significant reference for environmental policymaking and water resource protection.

Does exposure to zinc, methomyl, and perfluorooctanoic acid alter feeding behavior on MUG® in the freshwater amphipod Gammarus fossarum?

Feeding rate alteration is one of the first observed responses when animals are exposed to toxic stress and is recognized as a relevant tool for studying chemical compounds toxicity. However, food substrates that are currently used for ecotoxicity tests are not always easily available compared with referenced products. Using the European freshwater amphipod Gammarus fossarum, we here propose a standardized food substrate fabricated with referenced ingredients: the MUG® (meal unit for gammarid) for ecotoxicity tests. To investigate the suitability of using MUG to study behavioral response of amphipods to toxic stress, in laboratory-controlled conditions, we explored whether three chemical compounds belonging to different families of contaminants (zinc [Zn], a metal; methomyl [MT], an insecticide; and perfluorooctanoic acid [PFOA], a per-/poly-fluoroalkyl substance) could affect gammarids feeding rates on MUG. First, we explored the effects of 7-day exposure to different concentrations of each contaminant alone. Although PFOA did not affect feeding rate, Zn induced feeding behavior on MUG at a lower concentration but inhibited food consumption at higher ones, whereas MT decreased feeding rate with increased concentration. Then, we explored effects when gammarids were exposed during 7 days to mixtures of molecules in pairs. No effect of mixtures was observed on MUG consumption compared with the control group. Observed effects of binary mixtures were also compared with predicted values based on additive effects of contaminants. Both Zn/MT and Zn/PFOA mixtures inhibited feeding behavior compared with predictions, resulting in feeding rate values similar to controls. Overall, our study supports that MUG represents a promising standardized food substrate for evaluating substance effects on amphipod behavior during laboratory ecotoxicological bioassays.

Polycyclic Aromatic Hydrocarbons (PAHs) in Freshwater Systems: A Comprehensive Review of Sources, Distribution, and Ecotoxicological Impacts

This comprehensive review offers new perspectives on the distribution, sources, and ecotoxicological impacts of polycyclic aromatic hydrocarbons (PAHs) in freshwater systems. Unlike previous reviews, this work integrates recent findings on PAH dynamics within environmental matrices and emphasizes spatiotemporal variability across geographic regions. It critically examines both anthropogenic and natural sources, as well as the physical, chemical, and biological mechanisms driving PAH transport and fate. Special attention is given to the ecotoxicological effects of PAHs on freshwater organisms, including bioaccumulation, endocrine disruption, and genotoxicity. Notably, this review identifies key knowledge gaps and proposes an interdisciplinary framework to assess ecological risk and guide effective monitoring and management strategies for the protection of freshwater ecosystems.

Identifying Critical Land Use Thresholds for Biodiversity Conservation in China's Lake Ecosystems

Aquatic biodiversity loss, particularly in rapidly developing nations, continues to raise concerns, prompting urgent debates on reconciling economic growth with environmental preservation through land use planning. While spatial variations in aquatic communities along land use gradients are well-documented, precise ecological thresholds for land use impacts on freshwater lakes remain elusive, hindering sustainable development efforts. This study investigated six representative freshwater lakes in China between 2019 and 2020, all significantly impacted by anthropogenic activities. We utilized macroinvertebrate communities as bioindicators and employed four categories of aquatic ecological metrics─taxonomic diversity, functional diversity, pollution tolerance, and water quality─to assess their responses to local land use patterns. Macroinvertebrate community composition varied significantly among the studied lakes, with pollution-tolerant taxa predominating in highly urbanized and eutrophic systems. Notably, benthic communities exhibited greater sensitivity to urban land use (ecological thresholds: 2-10%) compared to agricultural land use (thresholds: 15-40%). The most pronounced responses were observed within 1-5 km of the lakeshore, with circular buffers yielding more significant effects than fan-shaped buffers, excluding water areas. A novel land use intensity indicator─the ratio of nonecological to ecological land (NEL/EL = area of nonecological land/area of ecological land)─proved effective in predicting ecological shifts. Smaller or heavily urbanized lakes showed marked changes at NEL/EL ratios between 0 and 0.6, while larger or river-connected lakes exhibited shifts at ratios exceeding 1.5. These findings underscore the profound ecological footprint of human activities on lake ecosystems with urban land cover emerging as the most deleterious factor.

Limnological data derived from high frequency monitoring buoys are asynchronous in a large lake

Autonomous data collection is rapidly becoming an integral part of water quality monitoring, particularly for agencies looking to manage and protect aquatic ecosystems. While beneficial, it is unclear how the collection of these data can be applied in spatially complex large lakes (e.g., Laurentian Great Lakes) given the spatial heterogeneity of the ecosystem. To address this potential shortcoming in large lakes, we assessed the synchrony of sensor variables between 10 pairs of static buoys in the western basin of Lake Erie (western basin surface area =  3,282 km2). Within western Lake Erie, water temperature was highly synchronous whereas dissolved oxygen, turbidity, chlorophyll and phycocyanin were asynchronous. The extent of this asynchrony was higher with increasing spatial distance between buoys. We found that between pairs of static buoys, temperature, dissolved oxygen, and turbidity all experienced decreasing correlations with increasing distance. Our results show that if researchers intend to leverage these data to answer important questions and provide real-time applications related to environmental issues like harmful algal/cyanobacterial blooms, monitoring networks need to be designed carefully with spatial complexity in mind. While autonomous data collection has many benefits, the reliance on a single or limited network of anchored monitoring buoys in large lake ecosystems has a high probability of missing important spatial features of these systems.

Multidimensional patterns of bird diversity and its driving forces in the Yangtze River Basin of China

Biodiversity is fundamental to human well-being and economic development. The Yangtze River, the largest river in China, faces biodiversity loss due to habitat degradation, climate change, and other anthropogenic threats. However, the long-term changes in the region's biodiversity remain poorly understood. Here, we constructed an optimized living planet index (LPIO) by combining Partial Least Squares Structural Equation Modeling and Random Forest Modeling. Using data from a monitoring network of 536 sites, we observed an increasing trend in terrestrial bird diversity and functional complexity across the entire watershed from 2011 to 2020. Our findings indicate that a large-scale ecological restoration program has contributed to increases in terrestrial and aquatic bird diversity in the Yangtze River Basin. In contrast, bird diversity in the downstream area has decreased by 2.83%, largely due to a rapid decline in wetland birds. The degradation of wetland habitats and insufficient conservation measures have negatively impacted bird diversity in the downstream region. This suggests that although there have been significant improvements in terrestrial bird diversity, more effective wetland restoration is necessary for biodiversity conservation. We recommend optimizing the national large-scale biodiversity monitoring network and increasing the number of upstream monitoring sites.

A bacteria-based index of biotic integrity assesses aquatic ecosystems effectively in rewetted long-term dry river channel after water replenishment

Climate-induced droughts exert a significant influence on the connectivity of river systems. It is estimated that about 25% of the world's rivers ran dry before reaching the ocean due to climate change and human activities. Ecological water replenishment is an effective measure for restoring aquatic ecosystems damaged by drought. It is urgently needed to quantitatively assess the aquatic ecosystems in rewetted dry river channels after water replenishment. This study investigated the variations in phytoplankton, zooplankton, benthic macroinvertebrates, and benthic bacterial communities in the rewetted dry river channel of Yongding River after water replenishment. In comparison with the water column communities, the benthic macroinvertebrates were identified as limiting factors for ecological restoration in rewetted dry river channels. In the absence of a certain recovery time for benthic macroinvertebrates, the benthic bacterial-based index of biological integrity, especially calculated based on their intrinsic properties, can properly assess aquatic ecosystems in rewetted dry river channels.

Cost-effective alternatives to facilitate biomonitoring and bioassessment of neotropical streams

A reliable response of bioindicators to environmental variation is a cornerstone for effective bioassessment and biomonitoring. Fish and aquatic macroinvertebrates are widely used as bioindicators of different human impacts in freshwater ecosystems, but the cost-effectiveness of their usage can be improved through the use of surrogates. We investigated congruence patterns between using different taxonomic and numeric resolutions for aquatic macroinvertebrates and fish to assess community-environment relationships. We also tested whether dataset characteristics (e.g., area sampled, species pool) could explain the variation in the effectiveness of using different taxonomic and numerical resolutions. We used a Brazilian nationwide database encompassing multiple datasets with a gradient of riparian deforestation each. Our findings suggest that families and genera can effectively represent macroinvertebrate genera and fish species, respectively, when using community matrices for assessing community-environment relationships, with an acceptable loss of information. EPT (Ephemeroptera, Plecoptera, and Trichoptera) and Characiformes or Siluriformes may be used as a surrogate, in some cases, for the entire assemblages of macroinvertebrates and fish, respectively, but their use may result in higher loss of information. Presence-absence data also presented a minimal loss of information compared to abundance data, for both macroinvertebrates and fish. The variation in congruence levels among macroinvertebrate datasets was less predicted by dataset characteristics than fish. Across distinct resolutions, on average, 10 % and 19 % of the variation in community composition of macroinvertebrates and fish, respectively, was explained by broad-scale environmental variables, and the effect size was negatively affected by the dataset's sample size and spatial extent for fish. Whereas identification at species (fish) and genus (macroinvertebrates) level and quantification of all individuals still provide the best scenario, we provide evidence that coarser taxonomical resolution and presence-absence data can be used as cost-effective alternatives to facilitate biomonitoring and bioassessment of freshwaters in the Neotropical region impacted by deforestation.

A spatial inventory of freshwater macroinvertebrate occurrences in the Guineo-Congolian biodiversity hotspot

The Guineo-Congolian region, extending from Guinea in West Africa to the central part of Africa, is considered an important biodiversity hotspot in the Afrotropics. Aside from the underreporting and underestimation of freshwater ecosystems, the challenges regarding incorrect coordinates and taxonomical inaccuracies in freshwater species occurrence data pose another major hurdle that may hinder freshwater conservation efforts in the hotspot. Hence, for any biogeographic analysis, species distribution modelling or conservation initiative, it is crucial to use datasets that are, to the largest possible extent, free of spatial and taxonomic errors. We present the final output of 8,809 occurrences consisting of 4 phyla, eight classes, 32 orders, and 1,104 species. We also added the Hydrography90m stream network attributes to the macroinvertebrate occurrence records, such that the data spans across 2,890 sub-catchments and Strahler stream orders 1-12. These records are considered valid and can be used for biogeographic analysis of freshwater macroinvertebrates in this important yet understudied freshwater biodiversity hotspot.

One-quarter of freshwater fauna threatened with extinction

Freshwater ecosystems are highly biodiverse1 and important for livelihoods and economic development2, but are under substantial stress3. To date, comprehensive global assessments of extinction risk have not included any speciose groups primarily living in freshwaters. Consequently, data from predominantly terrestrial tetrapods4,5 are used to guide environmental policy6 and conservation prioritization7, whereas recent proposals for target setting in freshwaters use abiotic factors8-13. However, there is evidence14-17 that such data are insufficient to represent the needs of freshwater species and achieve biodiversity goals18,19. Here we present the results of a multi-taxon global freshwater fauna assessment for The IUCN Red List of Threatened Species covering 23,496 decapod crustaceans, fishes and odonates, finding that one-quarter are threatened with extinction. Prevalent threats include pollution, dams and water extraction, agriculture and invasive species, with overharvesting also driving extinctions. We also examined the degree of surrogacy of both threatened tetrapods and freshwater abiotic factors (water stress and nitrogen) for threatened freshwater species. Threatened tetrapods are good surrogates when prioritizing sites to maximize rarity-weighted richness, but poorer when prioritizing based on the most range-restricted species. However, they are much better surrogates than abiotic factors, which perform worse than random. Thus, although global priority regions identified for tetrapod conservation are broadly reflective of those for freshwater faunas, given differences in key threats and habitats, meeting the needs of tetrapods cannot be assumed sufficient to conserve freshwater species at local scales.

Predicting climate-change impacts on the global glacier-fed stream microbiome

The shrinkage of glaciers and the vanishing of glacier-fed streams (GFSs) are emblematic of climate change. However, forecasts of how GFS microbiome structure and function will change under projected climate change scenarios are lacking. Combining 2,333 prokaryotic metagenome-assembled genomes with climatic, glaciological, and environmental data collected by the Vanishing Glaciers project from 164 GFSs draining Earth's major mountain ranges, we here predict the future of the GFS microbiome until the end of the century under various climate change scenarios. Our model framework is rooted in a space-for-time substitution design and leverages statistical learning approaches. We predict that declining environmental selection promotes primary production in GFSs, stimulating both bacterial biomass and biodiversity. Concomitantly, predictions suggest that the phylogenetic structure of the GFS microbiome will change and entire bacterial clades are at risk. Furthermore, genomic projections reveal that microbiome functions will shift, with intensified solar energy acquisition pathways, heterotrophy and algal-bacterial interactions. Altogether, we project a 'greener' future of the world's GFSs accompanied by a loss of clades that have adapted to environmental harshness, with consequences for ecosystem functioning.

Taxonomic diversity, distribution, and ecology of the freshwater fishes of the Zambezian Lowveld Ecoregion in southern Africa: A systematic review

The Zambezian Lowveld Ecoregion (ZLE) is one of the 22 freshwater ecoregions covering southern Africa. This ecoregion covers ~520,418 km2 and extends from south of the Zambezi Delta in the north to the uMngeni River basin in the south. This study aimed to compile a comprehensive synthesis of the available information on the diversity and distribution of freshwater fishes in this ecoregion based on natural history collection holdings by reviewing the published scientific literature. In total, 105 native species belonging to 39 genera and 17 families were recorded from the ZLE. An important proportion, 20 (19%), of the species are considered to be narrow-range endemics. Nevertheless, the majority of them (81%) are considered to have broad geographic ranges, with some even extending into adjacent ecoregions. However, recent and ongoing studies indicate that the current taxonomy often underestimates the species diversity and therefore overestimates the distribution ranges of the latter group of freshwater fishes concerned. The present synthesis brings to the fore existing knowledge gaps in species diversity and distribution ranges of freshwater fishes of this ecoregion and highlights the need for the use of integrative approaches to address the prevailing taxonomic conflicts.

Bending the curve of global freshwater biodiversity loss: what are the prospects?

Freshwater biodiversity conservation has received substantial attention in the scientific literature and is finally being recognized in policy frameworks such as the Global Biodiversity Framework and its associated targets for 2030. This is important progress. Nonetheless, freshwater species continue to be confronted with high levels of imperilment and widespread ecosystem degradation. An Emergency Recovery Plan (ERP) proposed in 2020 comprises six measures intended to "bend the curve" of freshwater biodiversity loss, if they are widely adopted and adequately supported. We review evidence suggesting that the combined intensity of persistent and emerging threats to freshwater biodiversity has become so serious that current and projected efforts to preserve, protect and restore inland-water ecosystems may be insufficient to avert substantial biodiversity losses in the coming decades. In particular, climate change, with its complex and harmful impacts, will frustrate attempts to prevent biodiversity losses from freshwater ecosystems already affected by multiple threats. Interactions among these threats will limit recovery of populations and exacerbate declines resulting in local or even global extinctions, especially among low-viability populations in degraded or fragmented ecosystems. In addition to impediments represented by climate change, we identify several other areas where the absolute scarcity of fresh water, inadequate scientific information or predictive capacity, and a widespread failure to mitigate anthropogenic stressors, are liable to set limits on the recovery of freshwater biodiversity. Implementation of the ERP rapidly and at scale through many widely dispersed local actions focused on regions of high freshwater biodiversity and intense threat, together with an intensification of ex-situ conservation efforts, will be necessary to preserve native freshwater biodiversity during an increasingly uncertain climatic future in which poorly understood, emergent and interacting threats have become more influential. But implementation of the ERP must be accompanied by measures that will improve water, energy and food security for humans - without further compromising the condition of freshwater ecosystems. Unfortunately, the inadequate political implementation of policies to arrest widely recognized environmental challenges such as climate change do not inspire confidence about the possible success of the ERP. In many parts of the world, the Anthropocene future seems certain to include extended periods with an absolute scarcity of uncontaminated surface runoff that will inevitably be appropriated by humans. Unless there is a step-change in societal awareness of - and commitment to - the conservation of freshwater biodiversity, together with necessary actions to arrest climate change, implementation of established methods for protecting freshwater biodiversity may not bend the curve enough to prevent continued ecosystem degradation and species loss.

Reproductive intensity of fish assemblages from streams of the Contas river basin, State of Bahia, Northeastern Brazil

Information about the reproductive biology of fish assemblages is limited, particularly for coastal basins in Northeast Brazil. However, this information is crucial for understanding species' life histories and informing conservation strategies and management actions. The scarcity of studies on the reproductive patterns of stream fish highlights a significant research gap, as this knowledge is essential for the effective conservation of these ecosystems. This study aimed to assess the reproductive intensity of fish assemblages from streams that are part of two drainages of the Contas River basin (Upper Contas and Gongogi River drainages), which are located in two distinct biomes (Caatinga and Atlantic Forest, respectively) in the Northeast Brazil. The fish were collected between November 2012 and November 2013 in four quarterly expeditions that encompassed one seasonal cycle. The captures were conducted by electric fishing in 18 sampling sites, nine in the Upper Contas River drainage and nine in the Gongogi River drainage. We obtained the reproductive intensity index (RII) of the studied assemblage, being the values compared between expeditions, drainages, and sampling sites. The highest values of RII were observed between November/December and February/March in both drainages, which demonstrated that the highest reproductive intensity was associated to the rainy season. In the Upper Contas River streams, the reproductive peak intensity seems to be synchronized to the beginning of the rainy season, while in the Gongogi River drainage streams, the reproductive intensity remains high throughout the entire rainy season. Regarding spatial variation, the highest RII values were observed in smaller streams, probably associated with a more restricted species distribution in these locations. Our results indicate that the assessed streams play a crucial role in the reproduction of many fish species, as evidenced by the high reproductive intensity observed, particularly within the fish assemblage of the Upper Contas River.

Charting water quality improvements and practice reversion with pesticide interventions at catchment scale

Freshwater quality, and the impacts of farming practice on drinking water supplies, are of concern in many countries and time-limited catchment management interventions are commonly used to improve water quality. However, ending such schemes may result in practice reversion. This study adopts an interdisciplinary approach combining evidence from water quality monitoring data with a behavioural study of farmers to explore changes in land use practice with reference to the pesticide MCPA (2-methyl-4-chlorophenoxyacetic acid) following a catchment-based management scheme delivered in the cross-border Derg catchment in Northern Ireland/Ireland between 2018 and 2021. Analysis of over 10,000 water samples demonstrated that, compared to the Finn (Control), the scheme achieved a 15.2 % and a 5.5 % reduction in the frequency with which MCPA concentrations in the Derg (Treatment) exceeded the total (0.5 μg L-1) and individual (0.1 μg L-1) EU Drinking Water Directive limits for treated drinking water respectively. The post-intervention flow-weighted mean concentration (FWMC) of MCPA for Peak usage season (April-October) was 19 % lower than pre-intervention in the Derg when compared to the Finn, although the during-intervention Peak season FWMC was lower in the Derg than post-intervention, suggesting practice reversion. The farmer survey and workshops provided further evidence of changes in pesticide usage, but also subsequent practice reversion due to a strong status quo bias for MCPA and other, mainly financial, barriers inhibiting a shift to the alternative pesticide, glyphosate. This study concludes that catchment approaches can be successful, but sustained investment in catchment measures is essential to effect meaningful long-term behavioural change.

Evaluating multiannual sedimentary nutrient retention in agricultural two-stage channels

The two-stage channel (TSC) design with a vegetated man-made floodplain has been recommended as an alternative to conventional re-dredging for managing suspended sediment (SS) and nutrient loads in agricultural streams. However, there are currently uncertainties surrounding the efficiency of TSCs, since mass balances covering the whole annual hydrograph and including different periods of the channel life cycle are lacking. This paper aims to improve understanding of the medium-term morphological development and sedimentary nutrient retention when a dredged, trapezoidal-shaped channel is converted into a TSC, using a mass balance estimate of nutrient and carbon retention from immediately after excavation until the establishment of approximate biogeochemical equilibrium retention. We developed a framework allowing estimation of the sedimentary net retention of phosphorus (P), nitrogen (N) and carbon (C) considering the differences in the initial and mature biogeochemical conditions in topsoil between different channel parts. Further, we conducted repeated elevation surveys and analyses of vertical sedimentary elemental chemistry over a 9-year period to apply the framework at a pilot site in Southern Finland. The pilot TSC floodplain significantly retained SS and nutrients while the low-flow channel did not suffer from siltation, supporting the hypothesized enhanced self-cleansing capacity of TSCs compared to trapezoidal cross-sections. Because of the flushing of the earlier bed deposits, there was net release of SS, P, and N over the first 9 years in the entire TSC system. Depending on the element and channel part considered, physical deposition constituted 13‒79% of the net retention on the newly exposed, excavated surfaces, while the remainder could be attributed to biogeochemical retention, enriching the topsoil in nutrients and carbon. The developed framework is highly suitable to assess the medium-term sedimentary nutrient retention in TSC systems. As a novelty, the framework improves the reliability of the retention efficiency evaluation compared to the typically used snapshot water quality sampling and allows prioritizing the required sediment coring at further TSC sites. The results allow heterogeneities in the process rates to be quantified and potential inefficiencies in nutrient retention due to channel design and morphology to be identified.

Impacts of mining on the diversity of benthic macroinvertebrates - A case study of molybdenum mining area in Luanchuan county

Mineral exploitation is one of the human activities that seriously affect freshwater ecosystems. It is of great significance to study the impact of mining on the α and β diversity of macroinvertebrates. This study reveals the response of taxonomic and functional α and β diversity of macroinvertebrates to mining activities in the Luanchuan molybdenum mining area. A total of 40 sets of macroinvertebrates, sediment and water samples in the Taowan North River (TR), Yu River (UR) and Hongluo River (HR) in the molybdenum mining area were collected. The results show that: 1) the mining activities led to obvious differences in the environmental factors of the three rivers. The heavy metals in the sediments and water bodies of TR and UR showed different degrees of exceedance, while there was no exceedance of heavy metals in HR; 2) The taxonomic and functional α diversity was much lower in the TR and the UR than in the HR. The concentrations of heavy metals in sediments and water bodies were significantly negatively correlated with the taxonomic and functional α diversity; 3) Mineral extraction resulted in significant differences in macroinvertebrate β diversity among the three rivers. The taxonomic and functional β diversity of the macroinvertebrate communities in TR and UR was much higher than that in HR. The turnover and nestedness of functional β diversity showed significant differences. Functional β diversity was more obviously affected by heavy metal exceedance than taxonomic β diversity. Nestedness were more sensitive to exceedance of heavy metals than turnover. The results of this study can provide a theoretical basis for ecological restoration and protection of rivers in mining areas.

Unveiling cryptic macroinvertebrate sentinels to enhance biomonitoring in tropical rivers: Bridging traditional approaches with DNA barcoding in the Indo-Burma biodiversity hotspot

Human activities present significant threats to tropical freshwater ecosystems, notably in many global biodiversity hotspots, threats that are further increased by inadequate taxonomic knowledge and the lack of appropriate biomonitoring tools. This study integrates globally validated biomonitoring approaches with DNA-based identification methods to create a macroinvertebrate-based tool for diagnosing ecosystem health and assessing the biodiversity of tropical river ecosystems in Myanmar (Indo-Burma bioregion). To evaluate river site degradation, comprehensive data on water and habitat quality, as well as land use information, were collected. Riverine macroinvertebrates were sampled by kick sampling, and subsequent DNA barcoding analysis was used to establish molecular taxonomic units (MTUs) for key bioindicator groups, including Ephemeroptera, Plecoptera, Trichoptera, Coleoptera, and Odonata (EPTCO) as species-level identification nomenclature was lacking. Tolerance scores for the local fauna were derived along an environmental degradation gradient to enable comparisons with widely adopted global assessment tools relying on macroinvertebrate metrics. In both study areas, the upper parts of the river networks were generally undisturbed by human activities while stressors associated with urban and agricultural land use were evident in the lower parts of the catchments. The highest precision for assessment of river health was found when establishing tolerance scores adjusted to local species composition in each study area separately. Although a family-level-based multimetric approach was significantly related to the main environmental degradation gradient, assessments utilizing cryptic species-level data (MTUs) emerged as the being most precise indicator in both areas. Our study highlights the synergistic benefits of merging traditional biomonitoring with DNA-based methods for species identification for biomonitoring in tropical river ecosystems. To halt biodiversity decline and curb the extent of the escalating nature crisis, such integrated approaches will be highly valuable in understudied and biodiversity-rich aquatic ecosystems.

Freshwater mollusc community screening - Classical and eDNA monitoring methods to detect rare, indicator and invasive species

Freshwater habitats and their quality have always been of utmost importance for human subsistence. Water quality assessment is an important tool, covering biological, chemical and hydromorphological aspects. Bioindicators such as the bivalves can be used as evidence for good water quality, but widespread groups such as species of the family Sphaeriidae Deshayes,1855 (1822) and genus Pisidium/Euglesa/Odhneripidisium also known as 'pea clams' are poorly known and lack taxonomic expertise. The situation is similar for many other benthic macroinvertebrate species used in biomonitoring. In this study, we tested if pea clams can be detected using eDNA metabarcoding methods applied to sediment and plankton samples from 15 lakes and rivers in Sweden. Additionally, we detected benthic macroinvertebrates, so-called indicator species used in freshwater monitoring, as well as rare or red-listed and invasive species. We created a COI reference barcode library of 22 species of Swedish freshwater molluscs, of which one species is new, and five species have less than five records on NCBI and BOLD. From 272 sediment and plankton samples, we detected 497 benthic macroinvertebrate indicator species, 20 mollusc species and 3 invasive species in 15 freshwater environments in Sweden using eDNA metabarcoding. We show that one of the sediment sampling methods (M42) can detect slightly more species in autumn compared to the plankton or sediment kick-net methods, or to collecting samples in spring. A clear advantage is that biological water quality indices formerly calculated using taxa identified to the family level can now be calculated using the species level, giving higher precision. We suggest that future freshwater monitoring efforts can be greatly improved and sped up through large-scale and strategic habitat screening using barcoding and metabarcoding methods to support decision-making and help fulfill the goals of the UN 2030 Agenda.

Defining depth requirements to conserve fish assemblages from water take in an intermittent river

River systems once safeguarded from water development are being developed. This includes intermittent rivers that annually dry to a series of pools. Describing fish species relationships between abundance and pool depth can help managers set water-take rules that protect fish in dry-season pools. We sampled fish in main-channel and floodplain pools that spanned a gradient of depths and overcame sampling challenges by accounting for interacting effects of species mean length, environmental attributes, and sampling attributes on fish capture probabilities. Fish abundance-depth relationships varied systematically with species mean length, mesohabitat type (main channel, floodplain), water turbidity, and structural complexity, highlighting system complexity and the potential generality of abundance-depth relationships. Similarly, fish length moderated the effects of environmental attributes on capture probability for all sampling methods. We evaluated impacts of hypothetical water-take regulations on fish species' distributions. Results suggested that water-take rules prohibiting draining of main-channel pools below 1.65 m and reducing floodplain pools by no more than 14% minimises impacts to species' distributions, promoting conservation of the fish community. Additionally, our approach demonstrates the capacity of species length for predicting distributional and sampling patterns of fish species.

Differential response of multiple stream ecosystem processes to basin- and reach-scale drivers

Stream ecosystems are inherently dependent on their surroundings and, thus, highly vulnerable to anthropogenic impacts, which alter both their structure and functioning. Anchored in biologically-mediated processes, the response of stream ecosystem functioning to environmental conditions exhibits intricate patterns, reflecting both natural dynamics and human-induced changes. Our study aimed at determining the natural and anthropogenic drivers influencing multiple stream ecosystems processes (nutrient uptake, biomass accrual, decomposition, and ecosystem metabolism) at a regional scale. By examining 38 natural and anthropogenic variables across 63 stream reaches in Gipuzkoa (northern Iberian Peninsula), we used structural equation modeling to unravel the cascading effect of basin- and reach-scale drivers onto ecosystem process. The results reveal significant variability in ecosystem processes, with contrasting spatial patterns, suggesting that studied processes respond differently to environmental factors. Urban land-use emerged as a primary basin-scale driver, whereas reach-scale variables reflected both natural and anthropogenic influence. Nutrient uptake rates were primarily driven by nutrient concentrations in stream water, but models for biomass accrual, decomposition, and ecosystem metabolism exhibited more complex cause-effect relationships. Our findings highlight the impact of urban areas on multiple ecosystem processes and services, disproportionate when considering their small land cover. The present study emphasizes the convenience of measuring multiple ecosystem functions simultaneously to get a comprehensive diagnosis of the functional status of rivers.

Quantitative study on the relationship between land use and land cover and diatom community in urban streams

The study of the impact of urbanization on river ecosystems is an important part of constructing sustainable cities. How to quantitatively study the impact of urbanization on river ecosystems is the difficulty of urban ecological research. This study quantitatively investigated the effects of LULC on water quality and diatom assemblages in urban streams by correlation analysis, multivariate analysis, and path analysis. The results showed that (1) the percentage of LULC type in buffer 600 m of reference stream sites is significantly different from that of urban stream sites. In reference sites, the average percentage of green was 94.2%, barren 3.3%, and impervious surface 2.5%. In urban upstream sites, the average percentage of impervious surface was 63.1%, green 32.8%, water 3.3%, and barren 0.8%. In urban downstream, the average percentage of impervious surface was 59.0%, green 36.5%, water 2.7%, and barren 1.8%. (2) One-way analysis results showed that water quality variables were significantly differences among the sites. The correlation analysis results indicated that LULC had a significant influence on water quality. Green had a significant negative correlation with high concentrations of NO3-N, NH4-N, and Cond. but positively correlated with MSUBST. RDA results showed that the selected water quality variables, MSUBST, and LULC types have a significant impact on the spatial patterns of the diatom assemblages. (3) Path analysis results showed that both LULC types and water quality variables exerted significant effects on diatom assemblages. This study first clarifies the quantitative relationships among LULC types, water quality, and diatom assemblages in the Beijing area. And green land was positively correlated with water quality and river ecosystems. We believed that increasing green space in urban core areas is an effective measure for improving water quality and restoring river ecosystems in the urban area.

An overview of vinasse pollution in aquatic ecosystems in Brazil

We review the negative impacts of vinasse, a byproduct of alcohol distillation, on Brazil's freshwater ecosystems. We found a total of 37 pollution events between the years 1935 and 2023, with this number almost certainly an underestimate due to underreporting and/or unassessed events. Pollution by vinasse occurred both through accidents (e.g., tank failure) and deliberately (i.e., opening of floodgates), although in many cases the causes remain undetermined. All pollution events caused fish kills, with some records reporting negative effects on other organisms as well (i.e., crustaceans and reptiles). Pollution by vinasse, and associated negative effects, was reported for 11 states, with a notable number of cases in São Paulo. Most cases of vinasse pollution and negative impacts on biodiversity were recorded in rivers, followed by streams and reservoirs. Some of the affected river systems harbour threatened freshwater fishes. Hydrological connectivity means that pollution could have propagated along watercourses. Given these consequences of vinasse pollution on biodiversity, ecosystem functioning and services, we recommend a number of remedial actions.

Chalk stream restoration: Physical and ecological responses to gravel augmentation

To mitigate the morphological and ecological impacts of direct (e.g. dredging) and indirect (e.g. damaged river function) sediment loss, gravel augmentation is commonly practiced in river systems globally. Despite this, the effectiveness of this practice remains poorly understood, especially in less often considered systems such as chalk streams which present uncommon conditions (e.g. low stream power, stable flow) and may respond to interventions in ways that differ from systems more commonly studied. This study quantified immediate (0-1 years) and short-term (1-2 years) physical and ecological responses to gravel augmentation at two English chalk stream restoration sites: Home Stream (HS; River Test) and East Lodge (EL; River Itchen). We quantified habitat (depth, velocity, substrate composition), cover of different macrophytes, and macroinvertebrate (before-after-control-impact) abundance and community structure. Restoration reduced depth and increased gravel cover in both sites and decreased the cover of filamentous green algae in HS. Macroinvertebrate communities became more dominated by silt-intolerant taxa, while abundance [HS only] and taxon richness increased 1-2 years post-restoration. Whilst the responses found were generally positive in light of the restoration goals, the effects varied across sites, post-restoration time periods and ecological groups, emphasising the need for the more holistic monitoring of restoration projects considering community-level responses at different sites and systems over ecologically relevant timescales. This will help inform on the generality and longevity of responses and provide the evidence needed to develop sound restoration practice.

Microplastics and riverine macroinvertebrate communities in a multiple-stressor context: A mesocosm approach

Growing use of synthetic materials has increased the number of stressors that can degrade freshwater ecosystems. Many of these stressors are relatively new and poorly understood, such as microplastics which are now ubiquitous in freshwater systems. The effects of microplastics on freshwater biota must be investigated further in order to better manage and mitigate their impacts. Our experiment provides the first empirical evaluation of stream invertebrate community dynamics in response to microplastics of different concentrations and sizes, in combination with fine sediment, a pervasive known stressor in running waters. In a 7-week streamside experiment using 64 flow-through circular mesocosms, we investigated the effects of exposure to three simulated microplastic influxes (polyethylene microspheres at four levels between 0 and 28,800 items/event) and the addition of fine sediment (to simulate a polluted stream environment). Invertebrate drift was monitored for 48 h immediately after each microplastic influx, and benthic invertebrate communities were sampled after 28 days of microplastic and sediment manipulations. Microplastic concentration, size and fine sediment all had significant factor main effects on several invertebrate drift response metrics, whereas few microplastic main effects were seen in the benthic community. However, interactive stressor effects were common in different combinations between sediment, microplastic size and concentration, suggesting multiple-stressor relationships between microplastics and fine sediment. Microplastic ingestion was witnessed in four of 12 taxa analysed: Hydrobiosidae, Deleatidium spp., Potamopyrgus antipodarum and Archichauliodes diversus. Our findings provide insights into how microplastics affect drift and benthic community dynamics of stream invertebrates in a field-realistic experimental setting and highlight areas requiring further study. These include investigations of invertebrate drift dynamics in response to other types of microplastics, the role invertebrate size may play in determining their vulnerability to microplastic pollution, and framing more microplastic research in a field-realistic multiple-stressor context.

The impact of anthropogenic pressures on microbial diversity and river multifunctionality relationships on a global scale

Conserving biodiversity is crucial for maintaining essential ecosystem functions, as indicated by the positive relationships between biodiversity and ecosystem functioning. However, the impacts of declining biodiversity on ecosystem functions in response to mounting human pressures remain uncertain. This uncertainty arises from the complexity of trade-offs among human activities, climate change, river properties, and biodiversity, which have not been comprehensively addressed collectively. Here, we provide evidence that river biodiversity was significantly and positively associated with multifunctionality and contributed to key ecosystem functions such as microbially driven water purification, leaf litter decomposition and pathogen control. However, human pressure led to abrupt changes in microbial diversity and river multifunctionality relationships at a human pressure value of 0.5. In approximately 30 % (N = 58) of countries globally, the ratio of area above this threshold exceeded the global average (∼11 %), especially in Europe. Results show that human pressure affected ecosystem functions through direct effects and interactive effects. We provide more direct evidence that the nonadditive effects triggered by prevailing human pressure impact the multifunctionality of rivers globally. Under high levels of human stress, the beneficial effects of biodiversity on nutrient cycling, carbon storage, gross primary productivity, leaf litter decomposition, and pathogen control tend to diminish. Our findings highlight that considering interactions between human pressure and local abiotic and biotic factors is key for understanding the fate of river ecosystems under climate change and increasing human pressure.

Changes of ecological vulnerability in areas with different urban expansion patterns- A case study in the Yanhe river basin, China

Urban expansion has the potentiality to disrupt ecosystems and form highly fragile urban landscapes. However, studies investigating the impact of different urban expansion patterns on the ecological environments are relatively limited. Taking the Yanhe river basin, a typical basin in a loess region, as a case study, we developed an ecological vulnerability assessment system as well as assessed the main drivers of ecological vulnerability for different time periods (1990, 2000, 2010 and 2018). Additionally, we classified each urban expansion region into three different patterns according to the landscape expansion index, and analyzed changes in the ecological vulnerability under these three diverse patterns. Finally, the Kruskal-Wallis rank sum test was applied to compare the factors for the different changes in ecological vulnerability across different urban expansion patterns. Our investigation also aimed to elucidate the impacts of different urban expansion patterns on ecological vulnerability and identify key physical-social-economic-climatic drivers. The results indicate that the ecological vulnerability index (EVI) of the study area is decreasing gradually from the peak value of 0.459 in 2000 to 0.383 in 2018. Habitat quality index is found to be the most influencing factor, followed by aridity index and building density (mean q of 0.53, 0.46, and 0.42, respectively). Our study also reveals that the outlying expansion areas have the greatest increase in EVI at 0.38, with edge and infill expansions at 0.31 and 0.27, respectively. It is also found that when the overall environment is improving, the outlying expansion areas have the smallest decrease in EVI. Initial ecological vulnerability and key drivers may explain this difference. Therefore, results of this study indicate that the ecological impacts of diverse urban expansion patterns are significantly different, among which outlying expansions should receive prioritized attention.

Multiscale morphological trajectories to support management of free-flowing rivers: the Vjosa in South-East Europe

Free-flowing rivers (FFRs) are fundamental references for river management, providing the opportunity to investigate river functioning under minimal anthropic disturbance. However, large free-flowing rivers are rare in Europe and worldwide, and knowledge of their dynamics is often scarce due to a lack of data and baseline studies. So far, their characterization is mainly grounded in the longitudinal connectivity assessment, with scarce integration of further hydro-morphological aspects, particularly concerning the processes and drivers of changes in their morphology over time scales of management relevance. This work aims to broaden the characterization of FFRs by reconstructing their catchment-scale morphological evolutionary trajectories and understanding their driving causes, to support their management better. This is achieved by integrating freely available global data including Landsat imagery and climatic reanalysis with the few locally available quantitative and qualitative information. The analysis of possible drivers of change at the catchment and reach scale assesses hydrological variability, flow regulation, land use change, sediment mining and bank protection works. We applied this approach to the Vjosa River (Albania), a model ecosystem of European significance and one of the few FFRs in Europe. The Vjosa was recently declared a Wild River National Park. We investigated its catchment-scale morphological changes over 50 years, considering four reaches of the Vjosa and four reaches of its main tributaries. Satellite imagery was analyzed taking advantage of Google Earth Engine cloud computing platform. The analysis reveals a catchment-scale response to climatic fluctuations, especially in the most natural reaches, with a significant narrowing of the active river corridor, following a flood-intense period in the early 1960s. The narrowing rate gradually decreased, from 35% before 1985 to 24% between 1985 and 2000, reaching a new equilibrium from 2000 to 2020. However, the recent trajectories of the lowland reaches have been impacted by human pressures, particularly sediment mining, which intensified after the 1990s, suggesting that these reaches may instead be far from equilibrium and adjusting to such persistent stressor. Identifying the key drivers of change and building catchment-scale knowledge of geomorphic change can inform the management of riverine protected areas, and the proposed integrated approach is a promising tool to help overcome the data scarcity typical of the limited remaining large FFRs.

Eta-Earth Revisited I: A Formula for Estimating the Maximum Number of Earth-Like Habitats

In this hypothesis article, we discuss the basic requirements of planetary environments where aerobe organisms can grow and survive, including atmospheric limitations of millimeter-to-meter-sized biological animal life based on physical limits and O2, N2, and CO2 toxicity levels. By assuming that animal-like extraterrestrial organisms adhere to similar limits, we define Earth-like habitats (EH) as rocky exoplanets in the habitable zone for complex life that host N2-O2-dominated atmospheres with minor amounts of CO2, at which advanced animal-like life or potentially even extraterrestrial intelligent life can in principle evolve and exist. We then derive a new formula that can be used to estimate the maximum occurrence rate of such Earth-like habitats in the Galaxy. This contains realistic probabilistic arguments that can be fine-tuned and constrained by atmospheric characterization with future space and ground-based telescopes. As an example, we briefly discuss two specific requirements feeding into our new formula that, although not quantifiable at present, will become scientifically quantifiable in the upcoming decades due to future observations of exoplanets and their atmospheres. Key Words: Eta-Earth-Earth-like habitats-oxygenation time-nitrogen atmospheres-carbon dioxide-animal-like life. Astrobiology 24, 897-915.

Genomic and Epigenomic Influences on Resilience across Scales: Lessons from the Responses of Fish to Environmental Stressors

Understanding the factors that influence the resilience of biological systems to environmental change is a pressing concern in the face of increasing human impacts on ecosystems and the organisms that inhabit them. However, most considerations of biological resilience have focused at the community and ecosystem levels, whereas here we discuss how including consideration of processes occurring at lower levels of biological organization may provide insights into factors that influence resilience at higher levels. Specifically, we explore how processes at the genomic and epigenomic levels may cascade up to influence resilience at higher levels. We ask how the concepts of "resistance," or the capacity of a system to minimize change in response to a disturbance, and "recovery," or the ability of a system to return to its original state following a disturbance and avoid tipping points and resulting regime shifts, map to these lower levels of biological organization. Overall, we suggest that substantial changes at these lower levels may be required to support resilience at higher levels, using selected examples of genomic and epigenomic responses of fish to climate-change-related stressors such as high temperature and hypoxia at the levels of the genome, epigenome, and organism.

How effective are ecological metrics in supporting conservation and management in degraded streams?

Biodiversity loss is increasing worldwide, necessitating effective approaches to counteract negative trends. Here, we assessed aquatic macroinvertebrate biodiversity in two river catchments in Switzerland; one significantly degraded and associated with urbanisation and instream barriers, and one in a near-natural condition. Contrary to our expectations, environmental heterogeneity was lower in the near-natural stream, with enhanced productivity in the degraded system resulting in a greater range of environmental conditions. At face value, commonly employed alpha, beta and gamma biodiversity metrics suggested both catchments constituted healthy systems, with greater richness or comparable values recorded in the degraded system relative to the near-natural one. Further, functional metrics considered to be early indicators for anthropogenic disturbance, demonstrated no anticipated differences between degraded and near-natural catchments. However, investigating the identity of the taxa unique to each river system showed that anthropogenic degradation led to replacement of specialist, sensitive species indicative of pristine rivers, by generalist, pollution tolerant species. These replacements reflect a major alteration in community composition in the degraded system compared with the near-natural system. Total nitrogen and fine sediment were important in distinguishing the respective communities. We urge caution in biodiversity studies that employ numerical biodiversity metrics alone. Assessing just one aspect of diversity, such as richness, is not sufficient to track biodiversity changes associated with environmental stress. We advocate that biodiversity monitoring for conservation and management purposes must go beyond traditional richness biodiversity metrics, to include indices that incorporate detailed nuances of biotic communities that relates to taxon identity.

Supplementary Information

The online version contains supplementary material available at 10.1007/s10531-024-02933-7.

Nematofauna of Bryconops cf. affinis (Characiformes, Iguanodectidae) and Saxatilia brasiliensis (Cichliformes, Cichlidae) from the Munim River basin, Northeastern Brazil

Populations of freshwater species have been declining rapidly and species are becoming extinct. Thus, understanding freshwater species distribution, trends and patterns is required. The Munim River basin is situated in a region with a phytogeographic interface between the Amazon and Cerrado biomes. Although the Munim basin ichthyofauna is currently relatively well-known, data on its helminth fauna is scarce. The present study aimed to characterize the nematofauna of Bryconops cf. affinis (Günther) and Saxatilia brasiliensis (Bloch) from two different localities in the middle section of the Munim River, and thus to contribute to the knowledge of biodiversity in this region. Specimens of Bryconops cf. affinis were parasitized with the nematodes Procamallanus (Spirocamallanus) krameri (Petter, 1974) and "Porrocaecum-like" species (larvae) in both localities. Saxatilia brasiliensis presented the nematodes P. (S.) krameri, Pseudoproleptus sp. (larvae), Cucullanus sp. and Procamallanus sp. (larvae). Procamallanus (S.) krameri was found parasitizing S. brasiliensis only from the Feio stream. Morphometric data and parasitological parameters are given. The present study provides the first record of nematodes for B. cf. affinis and for S. brasiliensis contributing to the knowledge of the helminth fauna of freshwater fishes from locations that have not yet been studied, such as the Munim River basin.

Rainfall seasonality shapes microbial assembly and niche characteristics in Yunnan Plateau lakes, China

Microorganisms are crucial components of freshwater ecosystems. Understanding the microbial community assembly processes and niche characteristics in freshwater ecosystems, which are poorly understood, is crucial for evaluating microbial ecological roles. The Yunnan Plateau lakes in China represent a freshwater ecosystem that is experiencing eutrophication due to anthropogenic activities. Here, variation in the assembly and niche characteristics of both prokaryotic and microeukaryotic communities was explored in Yunnan Plateau lakes across two seasons (dry season and rainy season) to determine the impacts of rainfall and environmental conditions on the microbial community and niche. The results showed that the environmental heterogeneity of the lakes decreased in the rainy season compared to the dry season. The microbial (bacterial and microeukaryotic) α-diversity significantly decreased during the rainy season. Deterministic processes were found to dominate microbial community assembly in both seasons. β-Diversity decomposition analysis revealed that microbial community compositional dissimilarities were dominated by species replacement processes. The co-occurrence networks indicated reduced species complexity for microbes and a destabilized network for prokaryotes prior to rainfall, while the opposite was found for microeukaryotes following rainfall. Microbial niche breadth decreased significantly in the rainy season. In addition, lower prokaryotic niche overlap, but greater microeukaryotic niche overlap, was observed after rainfall. Rainfall and environmental conditions significantly affected the microbial community assembly and niche characteristics. It can be concluded that rainfall and external pollutant input during the seasonal transition alter the lake environment, thereby regulating the microbial community and niche in these lakes. Our findings offer new insight into microbiota assembly and niche patterns in plateau lakes, further deepening the understanding of freshwater ecosystem functioning.

Human activities strengthen the influence of deterministic processes in the mechanisms of fish community assembly in tropical rivers of Yunnan, China

Human-induced global alterations have worsened the severe decrease in fish biodiversity in rivers. To successfully reduce the pace of reduction in fish diversity, it is crucial to prioritize the understanding of how human activities impact the processes that shape and maintain fish diversity. Traditional fish survey methods are based on catch collection and morphological identification, which is often time-consuming and ineffective. Hence, these methods are inadequate for conducting thorough and detailed large-scale surveys of fish ecology. The rapid progress in molecular biology techniques has transformed environmental DNA (eDNA) technique into a highly promising method for studying fish ecology. In this work, we conducted the first systematic study of fish diversity and its formation and maintenance mechanism in the Xishuangbanna section of the Lancang River using eDNA metabarcoding. The eDNA metabarcoding detected a total of 159 species of freshwater fishes spanning 13 orders, 34 families, and 99 genera. The fishes in the order cypriniformes were shown to be overwhelmingly dominant. At different intensities of anthropogenic activity, we found differences in fish community composition and assembly. The analysis of the Sloan's neutral community model fitting revealed that stochastic processes were the dominant factor in the shaping of fish communities in the Xishuangbanna section of the Lancang River. We have further confirmed this result by using the phylogenetic normalized stochasticity ratio. Furthermore, our findings indicate that as human activities get more intense, the influence of stochastic processes on the shaping of fish communities decreases, while the influence of deterministic processes eventually becomes more prominent. Finally, we discovered that salinity positively correlated with fish community changes in the high-intensity anthropogenic sample sites, but all environmental factors had little effect on fish community changes in the low-intensity and moderate-intensity anthropogenic sample sites. Our study not only validated the potential application of eDNA metabarcoding for monitoring fish diversity in tropical rivers, but also revealed how fish communities respond to human activities. This knowledge will serve as a solid foundation for the protection of fish resources in tropical rivers.

Influence of urbanization on size and biomass of a small-sized characid fish (Diapoma alburnum) in a subtropical river basin of southern Brazil

The coastal lagoons of the Tramandaí River basin are dynamic ecosystems characterized by high biodiversity. They provide important ecosystem services, such as water supply for human consumption, industry, agriculture, animal husbandry, leisure activities, tourism and fishing. Constant increases in the human population and the use and occupation of the land around the lagoons has brought growing demands for their resources, resulting in increased pressure that compromises these ecosystems. Understanding how biological populations respond to these anthropogenic pressures is essential. This study examined whether the degree of urbanization around 23 lagoons in the Tramandaí River basin influences the size and biomass of the characid fish species Diapoma alburnum. Specimens were collected between 2009 and 2012 using standardized drag nets. All specimens were measured for standard length to determine average length (size) per lagoon, while all fish collected per lagoon were weighed together to determine average biomass per lagoon by dividing by the number of specimens. Urbanization around the lagoons was measured using satellite images representing artificial nocturnal light as a proxy for urbanization. Nocturnal light intensity was measured within 1 km, 3 km, and 5 km buffers around each lagoon. The resulting urbanization index ranged 6 - 44% for the 5 km buffer, from 3 - 55% for the 3 km buffer and 1 - 65% for the 1 km buffer. Regression analyses showed a significant positive relationship with increasing urbanization around lagoons for D. alburnum average biomass in the 3 km and 5 km buffers and for D. alburnum average length in the 3 km buffer. Although urbanization around the lagoons is not fully established, the results indicate its impact on the size and biomass of D. alburnum.

Assessing ecosystem health: A preliminary investigation of the gosikhurd dam ecosystem structure and functioning, an appraisal based on ecological modelling, India

This study aims to comprehensively understand the Gosikhurd Dam ecosystem (GDE) ecosystem by employing the Ecopath with Ecosim software (version 6.6.5) to construct a trophic mass balancing model. This model consisted of 16 functional groups of organisms, and their interactions and trophic levels were explored. The study focuses on various performance indicators to assess the ecosystem's maturity and complexity. To achieve these objectives, monthly fish samples were collected from June 2022 to May 2023. Performance indicators such as the connectance index (CI), system omnivory index (SOI), Finn's cycling index (FCI), mean path length (FML), ascendency, overhead, and Shannon diversity index were calculated to assess ecosystem maturity and complexity. The Finn's cycling index (FCI) and the mean path length (FML) were calculated as 1.81 and 2.20, respectively, indicating the ecosystem's responsiveness to environmental changes and overall system health and stability. Ascendency and overhead values were also analysed, with ascendency being relatively higher (41.58%), reflecting a system that utilises less than half of its total capacity. The overhead value (58.42%) indicated that the ecosystem is relatively stable and capable of adapting to external perturbations. Furthermore, the Shannon diversity index was 1.67, illustrating less diversity and validating the ecosystem's immaturity. The study identifies critical species and their roles in shaping the ecosystem dynamics, highlighting the importance of zooplankton, zoobenthos, and tilapia as keystone species. These indices propound that GDE is in its developmental stage and lacks complexity compared to mature ecosystems. The findings provide valuable insights into the current state of the ecosystem and can guide future management and conservation efforts.

Fire impacts on the biology of stream ecosystems: A synthesis of current knowledge to guide future research and integrated fire management

Freshwater ecosystems host disproportionately high biodiversity and provide unique ecosystem services, yet they are being degraded at an alarming rate. Fires, which are becoming increasingly frequent and intense due to global change, can affect these ecosystems in many ways, but this relationship is not fully understood. We conducted a systematic review to characterize the literature on the effects of fires on stream ecosystems and found that (1) abiotic indicators were more commonly investigated than biotic ones, (2) most previous research was conducted in North America and in the temperate evergreen forest biome, (3) following a control-impact (CI) or before-after (BA) design, (4) predominantly assessing wildfires as opposed to prescribed fires, (5) in small headwater streams, and (6) with a focus on structural and not functional biological indicators. After quantitatively analyzing previous research, we detected great variability in responses, with increases, decreases, and no changes being reported for most indicators (e.g., macroinvertebrate richness, fish density, algal biomass, and leaf decomposition). We shed light on these seemingly contradicting results by showing that the presence of extreme hydrological post-fire events, the time lag between fire and sampling, and whether the riparian forest burned or not influenced the outcome of previous research. Results suggest that although wildfires and the following hydrological events can have dramatic impacts in the short term, most biological endpoints recover within 5-10 years, and that detrimental effects are minimal in the case of prescribed fires. We also detected that no effects were more often reported by BACI studies than by CI or BA studies, raising the question of whether this research field may be biased by the inherent limitations of CI and BA designs. Finally, we make recommendations to help advance this field of research and guide future integrated fire management that includes the protection of freshwater ecosystems.

A comprehensive review of the biodiversity of freshwater fish species in Valleys worldwide and in the Kingdom of Saudi Arabia

An overview of freshwater fish variety worldwide and the variables influencing trends in variation between and within river basins are given in this review. Continental freshwater ecosystems are highly diverse and species-rich, housing nearly 18,000 species of fish (=50% of all fish species) in <0.5% of the total land area and providing a negligible (<0.01%) share of the planet's water supply. Large lowland tropical river basins such as the Amazon, Congo, and Mekong basins are home to the greatest freshwater fish diversity. Freshwater species of fish depth variation at the global magnitude is correlated with the total amount and variation of aquatic habitats and the environment's equilibrium overtime during the evolution of scales. The river continuum concept states that there is a predictable shift in fish species depth, diversity of species, and functional characteristics along gradients of environment from headwater to estuary. The ongoing trade of minerals and organic matter related to nearby floodplains is a strong factor in the number and variety of riverine fishes in most parts of the world (the flood pulse concept). Without coordinated conservation efforts, freshwater fishes will suffer significant losses in abundance and diversity due to the numerous threats they currently face worldwide. However, further development, adaptation, training, and guidance are needed. New technologies based on water conservation, suitable species, and local traditions are needed. Waste materials and local feed additives can also be used. Farmers should be provided with the necessary training and information.

One like all? Behavioral response range of native and invasive amphipods to neonicotinoid exposure

Native and invasive species often occupy similar ecological niches and environments where they face comparable risks from chemical exposure. Sometimes, invasive species are phylogenetically related to native species, e.g. they may come from the same family and have potentially similar sensitivities to environmental stressors due to phylogenetic conservatism and ecological similarity. However, empirical studies that aim to understand the nuanced impacts of chemicals on the full range of closely related species are rare, yet they would help to comprehend patterns of current biodiversity loss and species turnover. Behavioral sublethal endpoints are of increasing ecotoxicological interest. Therefore, we investigated behavioral responses (i.e., change in movement behavior) of the four dominant amphipod species in the Rhine-Main area (central Germany) when exposed to the neonicotinoid thiacloprid. Moreover, beyond species-specific behavioral responses, ecological interactions (e.g. parasitation with Acanthocephala) play a crucial role in shaping behavior, and we have considered these infections in our analysis. Our findings revealed distinct baseline behaviors and species-specific responses to thiacloprid exposure. Notably, Gammarus fossarum exhibited biphasic behavioral changes with hyperactivity at low concentrations that decreased at higher concentrations. Whereas Gammarus pulex, Gammarus roeselii and the invasive species Dikerogammarus villosus, showed no or weaker behavioral responses. This may partly explain why G. fossarum disappears in chemically polluted regions while the other species persist there to a certain degree. But it also shows that potential pre-exposure in the habitat may influence behavioral responses of the other amphipod species, because habituation occurs, and potential hyperactivity would be harmful to individuals in the habitat. The observed responses were further influenced by acanthocephalan parasites, which altered baseline behavior in G. roeselii and enhanced the behavioral response to thiacloprid exposure. Our results underscore the intricate and diverse nature of responses among closely related amphipod species, highlighting their unique vulnerabilities in anthropogenically impacted freshwater ecosystems.

Azolla cultivation enables phosphate extraction from inundated former agricultural soils

To combat the global loss of wetlands and their essential functions, the restoration and creation of wetlands is imperative. However, wetland development is challenging when soils have been in prolonged agricultural use, often resulting in a substantial nutrient legacy, especially of phosphorous (P). Inundating these soils typically leads to P mobilization, resulting in poor water quality and low biodiversity recovery. As a potential novel means to overcome this challenge, we tested whether cultivation of the floating fern Azolla filiculoides could simultaneously extract and recycle P, and provide a commercial product. Azolla has high growth rates due to the nitrogen fixing capacity of its microbiome and is capable of luxury consumption of P. Azolla cultivation may also accelerate soil P mobilization and subsequent extraction by causing surface water anoxia and the release of iron-bound P. To test this approach, we cultivated Azolla on 15 P-rich former agricultural soils in an indoor mesocosm experiment. Soils were inundated and either left unvegetated or inoculated with A. filiculoides during two 8-week cultivation periods. Biomass was harvested at different intervals (weekly/monthly/bimonthly) to investigate the effect of harvesting frequency on oxygen (O2) and nutrient dynamics. We found that Azolla attained high growth rates only on soils with high mobilization of labile P, as plant cover did not reduce surface water O2 concentrations in the first phase after inundation. This concurred with low porewater iron to P ratios (<10) and high porewater P concentrations. A. filiculoides cultivation substantially reduced surface water nutrient concentrations and extracted P at rates up to 122 kg ha-1 yr-1. We conclude that rapid P extraction by A. filiculoides cultivation is possible on soils rich in labile P, offering new perspectives for wetland rehabilitation. Additional field trials are recommended to investigate long-term feasibility, seasonal variations, and the influence of potential grazers and pathogens.

Engaging internal and external audiences to develop and promote zoo-based conservation efforts

As place-based conservation organizations, zoos are in a central position to support individuals in making small changes in their lives that will support the protection of wildlife and their habitats. This paper describes the secondary analysis of data collected from multi-phase front-end, exploratory evaluation that informed the development of a conservation action campaign in association with a non-profit, urban zoo. In phase one, internal organization staff were invited to attend workshops during which they brainstormed potential conservation actions that they felt were important for the zoo to promote. They identified and ranked 164 unique actions. In phase two, the ranking was used to narrow down the 164 actions to 20 actions which were used to develop a survey administered to visitors who opted in to receiving online surveys from the zoo. The survey asked participants to state their interest in each of the 20 conservation actions. The Transtheoretical Model of Behavior Change informed the analysis of responses. Through this approach we identified actions that people were already doing, interested in doing, and not interested in doing. The responses from this survey were used to narrow down the list further to 10 actions used in a survey in phase three. This second survey administered to zoo visitors on grounds asked participants which of the 10 actions they would be most interested in doing, and the perceived barriers and benefits of doing them. This process allowed us to use evidence-based decision making to choose which conservation actions would resonate most with the community for our conservation action campaign. We also were able to identify values visitors held that might influence environmentally friendly behaviors. Visitors who responded to this survey tended to respond in ways that aligned with self-transcendent values. The research suggests that the campaign should focus on habitat restoration and remediation and purchasing wildlife friendly coffee and other products.

Evaluate effect of 126 pre-processing methods on various artificial intelligence models accuracy versus normal mode to predict groundwater level (case study: Hamedan-Bahar Plain, Iran)

The estimation of groundwater levels is crucial and an important step in ensuring sustainable management of water resources. In this paper, selected piezometers of the Hamedan-Bahar plain located in west of Iran. The main objective of this study is to compare effect of various pre-processing methods on input data for different artificial intelligence (AI) models to predict groundwater levels (GWLs). The observed GWL, evaporation, precipitation, and temperature were used as input variables in the AI algorithms. Firstly, 126 method of data pre-processing was done by python programming which are classified into three classes: 1- statistical methods, 2- wavelet transform methods and 3- decomposition methods; later, various pre-processed data used by four types of widely used AI models with different kernels, which includes: Support Vector Machine (SVR), Artificial Neural Network (ANN), Long-Short Term memory (LSTM), and Pelican Optimization Algorithm (POA) - Artificial Neural Network (POA-ANN) are classified into three classes: 1- machine learning (SVR and ANN), 2- deep learning (LSTM) and 3- hybrid-ML (POA-ANN) models, to predict groundwater levels (GWLs). Akaike Information Criterion (AIC) were used to evaluate and validate the predictive accuracy of algorithms. According to the results, based on summation (train and test phases) of AIC value of 1778 models, average of AIC values for ML, DL, hybrid-ML classes, was decreased to -25.3%, -29.6% and -57.8%, respectively. Therefore, the results showed that all data pre-processing methods do not lead to improvement of prediction accuracy, and they should be selected very carefully by trial and error. In conclusion, wavelet-ANN model with daubechies 13 and 25 neurons (db13_ANN_25) is the best model to predict GWL that has -204.9 value for AIC which has grown by 5.23% (-194.7) compared to the state without any pre-processing method (ANN_Relu_25).

Existing levels of biodiversity and river location may determine changes from small hydropower developments

Global ecosystems are facing anthropogenic threats that affect their ecological functions and biodiversity. However, we still lack an understanding of how biodiversity can mediate the responses of ecosystems or communities to human disturbance across spatial gradients. Here, we examined how existing, spatial patterns of biodiversity influence the ecological effects of small hydropower plants (SHPs) on macroinvertebrates in river ecosystems. This study found that levels of biodiversity (e.g., number of species) can influence the degrees of its alterations by SHPs occurring along elevational gradients. The results of the study reveal that the construction of SHPs has various effects on biodiversity. For example, low-altitude areas with low biodiversity (species richness less than 12) showed a small increase in biodiversity compared to high-altitude areas (species richness more than 12) under SHP disturbances. The increases in the effective habitat area of the river segment could be a driver of the enhanced biodiversity in response to SHP effects. Changes in the numerically dominant species contributed to the overall level of community variation from disturbances. Location-specific strategies may mitigate the effects of SHPs and perhaps other disturbances.

A temporal analysis of the consequences of the drought regime on the water footprint of agriculture in the Guadalupe Valley, Mexico

Changes in water availability have a substantial impact on the sustainability and maintenance of agriculture, with water footprint (WF) being a robust methodology to assess these transformations. The Guadalupe Valley is one of the places with the highest agricultural production in Mexico. Despite its semi-arid climatic conditions, it provides high-quality crops that are well-positioned in the world. The historical trend of rainfall and temperatures between 1987 and 2017 was analyzed to identify climatic patterns in the territory. Through the calculations of the water footprint of Grapevine and Olive crops, the sensitivity of the crops to recurrent water deficit and their adaptation in their yields to drought episodes was identified. The reduction in precipitation and occurrence of extreme temperatures have contributed significantly towards augmenting crop evapotranspiration and, consequently, intensifying crop irrigation demands. As a result, there has been an apparent increase in the consumption of WFagricultural since 2007. Thus, the period of highest WFagricultural consumption was 2014 (Extremely dry), as opposed to 2011 (Very wet). In particular, the lowest WFgreen consumptions were observed in extremely dry years, that is, > 20% of the WFagricultural intensifying drought events. Therefore, these periods were compensated with higher uses of WFblue and WFgray, which are inversely correlated with precipitation, where vine crops consume 73% more WFagricultural compared to olive plantations, showing greater interannual variability. These results contribute to analyzing the temporal evolution of water consumption for agriculture, providing a basis for rational water use strategies.

The multiscale nexus among land use-land cover changes and water quality in the Suquía River Basin, a semi-arid region of Argentina

Agricultural intensification and urban sprawl have led to significant alterations in riverscapes, and one of the critical consequences is the deterioration of water quality with significant implications for public health. Therefore, the objectives of this study were the assessment of the water quality of the Suquía River, the assessment of LULC change at different spatial scales, and the analysis of the potential seasonal correlation among LULC change and Water Quality Index (WQI). The Sample Sites (SS) 1 and 2 before Cordoba city had the highest WQI values while from SS3 the WQI decreased, with the lowest WQI close to the wastewater treatment plant (SS7) after Cordoba city. From SS8 in a agricultural context, the WQI increases but does not reach the original values. In light of analysis carried out, the correlation between water quality variables and the different LULC classes at the local and regional scales demonstrated that WQI is negatively affected by agricultural and urban activities, while natural classes impacted positively. The spatialization of the results can help strongly in assessing and managing the diffusion of point and non-point pollution along the riverscape. The knowledge gained from this research can play a crucial role in water resources management, which supports the provision of river ecosystem services essential for the well-being of local populations.

Recent Developments and Challenges in Projecting the Impact of Crop Productivity Growth on Biodiversity Considering Market-Mediated Effects

The effect of an increase in crop productivity (output per unit of inputs) on biodiversity is hitherto poorly understood. This is because increased productivity of a crop in particular regions leads to increased profit that can encourage expansion of its cultivated area causing land use change and ultimately biodiversity loss, a phenomenon also known as "Jevons paradox" or the "rebound effect". Modeling such consequences in an interconnected and globalized world considering such rebound effects is challenging. Here, we discuss the use of computable general equilibrium (CGE) and other economic models in combination with ecological models to project consequences of crop productivity improvements for biodiversity globally. While these economic models have the advantage of taking into account market-mediated responses, resource constraints, endogenous price responses, and dynamic bilateral patterns of trade, there remain a number of important research and data gaps in these models which must be addressed to improve their performance in assessment of the link between local crop productivity changes and global biodiversity. To this end, we call for breaking the silos and building interdisciplinary networks across the globe to facilitate data sharing and knowledge exchange in order to improve global-to-local-to-global analysis of land, biodiversity, and ecosystem sustainability.

Towards (better) fluvial meta-ecosystem ecology: a research perspective

Rivers are an important component of the global carbon cycle and contribute to atmospheric carbon exchange disproportionately to their total surface area. Largely, this is because rivers efficiently mobilize, transport and metabolize terrigenous organic matter (OM). Notably, our knowledge about the magnitude of globally relevant carbon fluxes strongly contrasts with our lack of understanding of the underlying processes that transform OM. Ultimately, OM processing en route to the oceans results from a diverse assemblage of consumers interacting with an equally diverse pool of resources in a spatially complex network of heterogeneous riverine habitats. To understand this interaction between consumers and OM, we must therefore account for spatial configuration, connectivity, and landscape context at scales ranging from local ecosystems to entire networks. Building such a spatially explicit framework of fluvial OM processing across scales may also help us to better predict poorly understood anthropogenic impacts on fluvial carbon cycling, for instance human-induced fragmentation and changes to flow regimes, including intermittence. Moreover, this framework must also account for the current unprecedented human-driven loss of biodiversity. This loss is at least partly due to mechanisms operating across spatial scales, such as interference with migration and habitat homogenization, and comes with largely unknown functional consequences. We advocate here for a comprehensive framework for fluvial networks connecting two spatially aware but disparate lines of research on (i) riverine metacommunities and biodiversity, and (ii) the biogeochemistry of rivers and their contribution to the global carbon cycle. We argue for a research agenda focusing on the regional scale-that is, of the entire river network-to enable a deeper mechanistic understanding of naturally arising biodiversity-ecosystem functioning coupling as a major driver of biogeochemically relevant riverine carbon fluxes.

Role of climatic variability in shaping intraspecific variation of thermal tolerance in Mediterranean water beetles

The climatic variability hypothesis (CVH) predicts that organisms in more thermally variable environments have wider thermal breadths and higher thermal plasticity than those from more stable environments. However, due to evolutionary trade-offs, taxa with greater absolute thermal limits may have little plasticity of such limits (trade-off hypothesis). The CVH assumes that climatic variability is the ultimate driver of thermal tolerance variation across latitudinal and altitudinal gradients, but average temperature also varies along such gradients. We explored intraspecific variation of thermal tolerance in three typical Mediterranean saline water beetles (families Hydrophilidae and Dytiscidae). For each species, we compared two populations where the species coexist, with similar annual mean temperature but contrasting thermal variability (continental vs. coastal population). We estimated thermal limits of adults from each population, previously acclimated at 17, 20, or 25 °C. We found species-specific patterns but overall, our results agree with the CVH regarding thermal ranges, which were wider in the continental (more variable) population. In the two hydrophilid species, this came at the cost of losing plasticity of the upper thermal limit in this population, supporting the trade-off hypothesis, but not in the dytiscid one. Our results support the role of local adaptation to thermal variability and trade-offs between basal tolerance and physiological plasticity in shaping thermal tolerance in aquatic ectotherms, but also suggest that intraspecific variation of thermal tolerance does not fit a general pattern among aquatic insects. Overlooking such intraspecific variation could lead to inaccurate predictions of the vulnerability of aquatic insects to global warming.